Citrus Sinensis ID: 039380

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-
MVLSDCSVIGMKSNGEIILIHHLKISHSRALDLLYPLAGRFATTYHHHDNTISFFVDCNTAGVDFVHVAADGVSVADILEPIYVLENIEGTSKTFLEVQVAKLKNRIFLACSTNISLVDGTSIWQFFQSWSEIRRGFSFDCIATSISTPPVLECWFPRNIDCPILIPKEKLSLQQLVACNQPLDPEVDVNCLLSIGVRTRLQPQLPQEYVGNIVQRGRDNESESGKGATWNLTTNPLTEYGTGSNASAISNSPRFDVYGNDFGWGKPIAVTGGSASKRNGKATTSARVEKASADIEIRLSVETLQRLQNDAQFMDAASVIT
cccccccccccccccHHHHHHHHHHHHHHHHHHccccccEEEEccccccccEEEEEEEcccccEEEEEEEccccHHHHccccccccccccccccEEEEEEEEEccEEEEEEEEEEEEcccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccccccEEEEEEEcccccccccccccccccEEEEcccccccccccccccccccccccccccccEEEEEccccccccccccccccEEEEEcccccccccEEEEEccccccEEEEEEEccHHHHHHHHccccccccccccc
cccccEEEEEcccccccHHHHHHHHHHHHHHHHccccccEEEEEcccccccEEEEEEEccccEEEEEEEcccccHHHcccccccccccccccccEEEEEEEEEcccEEEEEEEccccccHHHHHHHHHHHHHHHcccccccccccccccccHHHHccccccccccccccccHHHHHHHHHHcccccccEEEEEEEccccccccccccccccHHHHHcHHHHHHHHHHHHHHHcccccccccccccEEEEcccccccccccccccccEEEEEcccccccccEEEEEcccccccEEEEEEccHHHHHHHHHcHHHHHHccccc
mvlsdcsvigmksNGEIILIHHLKIShsraldllyplagrfattyhhhdntisffvdcntagvDFVHVaadgvsvadilePIYVLENIEGTSKTFLEVQVAKLKNRIFLACstnislvdgtSIWQFFQSWSEIRrgfsfdciatsistppvlecwfprnidcpilipkekLSLQQLVacnqpldpevdvncllsigvrtrlqpqlpqeyvGNIVqrgrdnesesgkgatwnlttnplteygtgsnasaisnsprfdvygndfgwgkpiavtggsaskrngkaTTSARVEKASADIEIRLSVETLQRLQNDAQFMDAASVIT
MVLSDCSVIGMKSNGEIILIHHLKISHSRALDLLYPLAGRFATTYHHHDNTISFFVDCNTAGVDFVHVAADGVSVADILEPIYVLENIEGTSKTFLEVQVAKLKNRIFLACStnislvdgTSIWQFFQSWSEIRRGFSFDCIATSISTPPVLECWFPRNIDCPILIPKEKLSLQQLVACNQPLDPEVDVNCLLSIGVrtrlqpqlpqeyVGNIVqrgrdnesesgkgatwnlttnplTEYGTGSNASAISNSPRFDVYGNDFGWGKPIAvtggsaskrngkattsarvekasadieIRLSVETLQrlqndaqfmdaasvit
MVLSDCSVIGMKSNGEiilihhlkishsRALDLLYPLAGRFATTYHHHDNTISFFVDCNTAGVDFVHVAADGVSVADILEPIYVLENIEGTSKTFLEVQVAKLKNRIFLACSTNISLVDGTSIWQFFQSWSEIRRGFSFDCIATSISTPPVLECWFPRNIDCPILIPKEKLSLQQLVACNQPLDPEVDVNCLLSIGVRTRLQPQLPQEYVGNIVQRGRDNESESGKGATWNLTTNPLTEYGTGSNASAISNSPRFDVYGNDFGWGKPIAVTGGSASKRNGKATTSARVEKASADIEIRLSVETLQRLQNDAQFMDAASVIT
*****CSVIGMKSNGEIILIHHLKISHSRALDLLYPLAGRFATTYHHHDNTISFFVDCNTAGVDFVHVAADGVSVADILEPIYVLENIEGTSKTFLEVQVAKLKNRIFLACSTNISLVDGTSIWQFFQSWSEIRRGFSFDCIATSISTPPVLECWFPRNIDCPILIPKEKLSLQQLVACNQPLDPEVDVNCLLSIGVRTRLQPQLPQEYVGNIV***************WNLT********************RFDVYGNDFGWGKPIAVT**************************************************
MVLSDCSVIGMKSNGEIILIHHLKISHSRALDLLYPLAGRFATTYHHHDNTISFFVDCNTAGVDFVHVAADGVSVADILEPIYVLENIEGTSKTFLEVQVAKLKNRIFLACSTNISLVDGTSIWQFFQSWSEIRRGFSF**I*TSISTPPVLECWFPRNIDCPILIPKEKLSLQQLVACNQPLDPEVDVNCLLSIGVRTRLQPQLPQEYVGNIVQRGRDNESESGKGATWNLTTNPLTEYGTGSNASAISNSPRFDVYGNDFGWGKPIAVTGGSASKRNGKATTSARVEKASADIEIRLSVETLQRLQNDAQFMDAASVIT
MVLSDCSVIGMKSNGEIILIHHLKISHSRALDLLYPLAGRFATTYHHHDNTISFFVDCNTAGVDFVHVAADGVSVADILEPIYVLENIEGTSKTFLEVQVAKLKNRIFLACSTNISLVDGTSIWQFFQSWSEIRRGFSFDCIATSISTPPVLECWFPRNIDCPILIPKEKLSLQQLVACNQPLDPEVDVNCLLSIGVRTRLQPQLPQEYVGNIVQRG*********GATWNLTTNPLTEYGTGSNASAISNSPRFDVYGNDFGWGKPIAVTGGS***************KASADIEIRLSVETLQRLQNDAQFMDAASVIT
*VLSDCSVIGMKSNGEIILIHHLKISHSRALDLLYPLAGRFATTYHHHDNTISFFVDCNTAGVDFVHVAADGVSVADILEPIYVLENIEGTSKTFLEVQVAKLKNRIFLACSTNISLVDGTSIWQFFQSWSEIRRGFSFDCIATSISTPPVLECWFPRNIDCPILIPKEKLSLQQLVACNQPLDPEVDVNCLLSIGVRTRLQPQLPQEYVGNIVQRGRDNESESGKGATWNLTTNPLTEYGTGSNASAISNSPRFDVYGNDFGWGKPIAVTGGSASKRNGKATTSARVEKASADIEIRLSVETLQRLQNDAQFMDAAS***
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MVLSDCSVIGMKSNGEIILIHHLKISHSRALDLLYPLAGRFATTYHHHDNTISFFVDCNTAGVDFVHVAADGVSVADILEPIYVLENIEGTSKTFLEVQVAKLKNRIFLACSTNISLVDGTSIWQFFQSWSEIRRGFSFDCIATSISTPPVLECWFPRNIDCPILIPKEKLSLQQLVACNQPLDPEVDVNCLLSIGVRTRLQPQLPQEYVGNIVQRGRDNESESGKGATWNLTTNPLTEYGTGSNASAISNSPRFDVYGNDFGWGKPIAVTGGSASKRNGKATTSARVEKASADIEIRLSVETLQRLQNDAQFMDAASVIT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query321 2.2.26 [Sep-21-2011]
Q9SND9443 Uncharacterized acetyltra no no 0.943 0.683 0.271 3e-34
Q9FF86 484 BAHD acyltransferase DCR no no 0.386 0.256 0.344 1e-10
Q70PR7421 Vinorine synthase OS=Rauv N/A no 0.744 0.567 0.219 0.0002
Q9FI78433 Shikimate O-hydroxycinnam no no 0.841 0.623 0.223 0.0006
Q8GSM7435 Shikimate O-hydroxycinnam N/A no 0.401 0.296 0.271 0.0006
Q9LRQ7451 BAHD acyltransferase At3g no no 0.345 0.246 0.248 0.0006
>sp|Q9SND9|Y3028_ARATH Uncharacterized acetyltransferase At3g50280 OS=Arabidopsis thaliana GN=At3g50280 PE=1 SV=1 Back     alignment and function desciption
 Score =  145 bits (367), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 176/394 (44%), Gaps = 91/394 (23%)

Query: 12  KSNGEIILIHHLKISHSRALDLLYPLAGRFATTYHHHDNTISFFVDCNTAGVDFVHVAAD 71
           K + E   I  L+ S S ALD+ +P AGR     +H D T+SF+++C+ +G  F+H  +D
Sbjct: 48  KPDPETHFISRLRTSLSSALDIYFPFAGRLNKVENHEDETVSFYINCDGSGAKFIHAVSD 107

Query: 72  GVSVADILEP---------IYV----LENIEGTSKTFLEVQVAKLKNRIFLACSTNISLV 118
            VSV+D+L P         I+     +++I+G S+  L +QV ++++ +F+    N  + 
Sbjct: 108 SVSVSDLLRPDGSVPDFFRIFYPMNGVKSIDGLSEPLLALQVTEMRDGVFIGFGYNHMVA 167

Query: 119 DGTSIWQFFQSWSEI-------------RRGFSFDCIATSI--------STPPVLEC--- 154
           DG SIW FF++WS+I              +G   D +   I        ++PP  E    
Sbjct: 168 DGASIWNFFRTWSKICSNGQRENLQPLALKGLFVDGMDFPIHIPVSDTETSPPSRELSPT 227

Query: 155 -------WFPRNI-------DCPILIPKEKLSLQQLVACNQ--------PLDPEVDVNCL 192
                  +  RNI       +  I +   K+S  Q V+ +          L+ E    C 
Sbjct: 228 FKERVFHFTKRNISDLKAKVNGEIGLRDHKVSSLQAVSAHMWRSIIRHSGLNQEEKTRCF 287

Query: 193 LSIGVRTRLQPQLPQEYVGNIVQ---------------------------RGRDNESESG 225
           +++ +R RL P L +E  G+++                            R   NE    
Sbjct: 288 VAVDLRQRLNPPLDKECFGHVIYNSVVTTTVGELHDQGLGWAFLQINNMLRSLTNEDYRI 347

Query: 226 KGATWNLTTNPLTEYGTGSNASA----ISNSPRFDVYGNDFGWGKPIAVTGGSASKRNGK 281
               W +    + + G GS  +     +S+SPRF+VY NDFGWGKPIAV  G ++  +GK
Sbjct: 348 YAENW-VRNMKIQKSGLGSKMTRDSVIVSSSPRFEVYDNDFGWGKPIAVRAGPSNSISGK 406

Query: 282 ATTSARVEKASADIEIRLSVETLQRLQNDAQFMD 315
                 +E+   D+   L  + L +L  D +F++
Sbjct: 407 LVFFRGIEEGCIDVHAFLLPDVLVKLLADVEFLE 440

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: -
>sp|Q9FF86|DCR_ARATH BAHD acyltransferase DCR OS=Arabidopsis thaliana GN=DCR PE=2 SV=1 Back     alignment and function description
>sp|Q70PR7|VINSY_RAUSE Vinorine synthase OS=Rauvolfia serpentina GN=ACT PE=1 SV=2 Back     alignment and function description
>sp|Q9FI78|HST_ARATH Shikimate O-hydroxycinnamoyltransferase OS=Arabidopsis thaliana GN=HST PE=2 SV=1 Back     alignment and function description
>sp|Q8GSM7|HST_TOBAC Shikimate O-hydroxycinnamoyltransferase OS=Nicotiana tabacum GN=HST PE=1 SV=1 Back     alignment and function description
>sp|Q9LRQ7|BAHD2_ARATH BAHD acyltransferase At3g29680 OS=Arabidopsis thaliana GN=At3g29680 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query321
55375996398 anthranilate N-hydroxycinnamoyl/benzoylt 0.912 0.736 0.378 6e-59
296082389 446 unnamed protein product [Vitis vinifera] 0.915 0.659 0.4 2e-58
255585099 437 Anthranilate N-benzoyltransferase protei 0.881 0.647 0.349 5e-56
225438767 448 PREDICTED: uncharacterized acetyltransfe 0.915 0.656 0.374 9e-56
118486289 440 unknown [Populus trichocarpa] 0.915 0.668 0.386 1e-55
118485848 440 unknown [Populus trichocarpa] 0.912 0.665 0.380 4e-54
224073798 430 predicted protein [Populus trichocarpa] 0.912 0.681 0.377 5e-54
224073800 440 predicted protein [Populus trichocarpa] 0.915 0.668 0.373 3e-53
225438765 437 PREDICTED: uncharacterized acetyltransfe 0.915 0.672 0.369 3e-51
225438769 441 PREDICTED: uncharacterized acetyltransfe 0.903 0.657 0.362 8e-51
>gi|55375996|gb|AAV50009.1| anthranilate N-hydroxycinnamoyl/benzoyltransferase [Malus x domestica] Back     alignment and taxonomy information
 Score =  234 bits (596), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 151/399 (37%), Positives = 191/399 (47%), Gaps = 106/399 (26%)

Query: 20  IHHLKISHSRALDLLYPLAGRFATTYHHHDNTISFFVDCNTAGVDFVHVAADGVSVADIL 79
           I HLK+S SR LD   PL+GR AT  HH DNT SFF++CN AG  FVH  A GV+V+DI 
Sbjct: 7   IQHLKVSLSRTLDFFPPLSGRLATI-HHDDNTTSFFINCNNAGALFVHAKAYGVTVSDIN 65

Query: 80  EPIYV-------------LENIEGTSKTFLEVQVAKLKNRIFLACSTNISLVDGTSIWQF 126
           E  YV              +N EGTSK  L VQV +L + IF+ C+ N ++VDGTS W F
Sbjct: 66  ESGYVPRDVVHSFFPLNGAKNYEGTSKPLLAVQVTELGDGIFIGCTVNHTVVDGTSFWHF 125

Query: 127 FQSWSEIRRGFSFDCIATSISTPPVLECWFPRNIDCPILIP------------------- 167
           F SWSEI RGF F      +S PPVL+ W       PI IP                   
Sbjct: 126 FNSWSEISRGFDF------VSKPPVLKRWLLDGTISPIRIPFSKIEDQVSDKYIGNIRVP 179

Query: 168 ----------KEKL---------------------SLQQLV---------ACNQPLDPEV 187
                     KEK+                     SLQ ++           N  LDP+ 
Sbjct: 180 LLKERVFHFSKEKIAQLKAKANAEIQLENTKRKISSLQAVLVHLWRSIIRGSNGDLDPDK 239

Query: 188 DVNCLLSIGVRTRLQPQLPQEYVGNIVQRG------RDNESESGKGATWNLTT------- 234
           + +  L IG R+R+ P L Q+Y GN VQ G      R+          W +         
Sbjct: 240 ESSYRLLIGARSRMNPPLSQQYFGNAVQAGTVTIKAREVIKRGLGFVAWEMNKMVALHTE 299

Query: 235 --------------NPLTEYGTGSNASAISNSPRFDVYGNDFGWGKPIAVTGGSASKRNG 280
                           LTE    +NA   S+SPRFDVYGNDFGWG+P+ V  G+ +K +G
Sbjct: 300 EKLRKFLECWVQEPKLLTEGNMAANALVTSSSPRFDVYGNDFGWGRPVGVRSGAGNKSHG 359

Query: 281 KATTSARVEKASADIEIRLSVETLQRLQNDAQFMDAASV 319
           K T  + VE+ S DIE  L  ETL+ + ND++FMDA +V
Sbjct: 360 KITVFSAVEEGSIDIEACLLAETLEAMGNDSEFMDAVTV 398

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|296082389|emb|CBI21394.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255585099|ref|XP_002533255.1| Anthranilate N-benzoyltransferase protein, putative [Ricinus communis] gi|223526911|gb|EEF29117.1| Anthranilate N-benzoyltransferase protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225438767|ref|XP_002282951.1| PREDICTED: uncharacterized acetyltransferase At3g50280 [Vitis vinifera] Back     alignment and taxonomy information
>gi|118486289|gb|ABK94986.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|118485848|gb|ABK94771.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224073798|ref|XP_002304177.1| predicted protein [Populus trichocarpa] gi|222841609|gb|EEE79156.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224073800|ref|XP_002304178.1| predicted protein [Populus trichocarpa] gi|222841610|gb|EEE79157.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225438765|ref|XP_002282930.1| PREDICTED: uncharacterized acetyltransferase At3g50280 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225438769|ref|XP_002278287.1| PREDICTED: uncharacterized acetyltransferase At3g50280-like [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query321
TAIR|locus:2155558448 AT5G67150 [Arabidopsis thalian 0.426 0.305 0.361 1.2e-41
TAIR|locus:2074775450 AT3G50270 [Arabidopsis thalian 0.411 0.293 0.361 5.2e-37
TAIR|locus:2155573434 EPS1 "ENHANCED PSEUDOMONAS SUS 0.417 0.308 0.368 1.3e-33
TAIR|locus:2074820448 AT3G50300 [Arabidopsis thalian 0.439 0.314 0.35 5.5e-32
TAIR|locus:2074790443 AT3G50280 [Arabidopsis thalian 0.414 0.300 0.331 2.9e-31
TAIR|locus:2176672462 AT5G38130 [Arabidopsis thalian 0.414 0.287 0.335 6.5e-31
TAIR|locus:2150044475 AT5G01210 [Arabidopsis thalian 0.489 0.330 0.323 8.8e-28
TAIR|locus:2061191 482 AT2G39980 [Arabidopsis thalian 0.299 0.199 0.353 6.1e-26
TAIR|locus:2142828464 AT5G07870 [Arabidopsis thalian 0.320 0.221 0.393 2.8e-22
TAIR|locus:2160001450 AT5G42830 [Arabidopsis thalian 0.380 0.271 0.343 2.1e-21
TAIR|locus:2155558 AT5G67150 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 237 (88.5 bits), Expect = 1.2e-41, Sum P(3) = 1.2e-41
 Identities = 55/152 (36%), Positives = 81/152 (53%)

Query:    30 ALDLLYPLAGRFATTYHHHDNTISFFVDCNTAGVDFVHVAADGVSVADILEPI------Y 83
             AL + YP AGR     +    T SF+VDC+ +GV F+H +A  VSV+D+LEP+      +
Sbjct:    68 ALKIFYPFAGRLVKVENEDAGTASFYVDCDGSGVKFIHASAKSVSVSDVLEPVDSNVPEF 127

Query:    84 V--------LENIEGTSKTFLEVQVAKLKNRIFLACSTNISLVDGTSIWQFFQSWSEIRR 135
             +        + + EG S++ +  QV +LK+ +F+    N  + DG+S W FF +WSEI  
Sbjct:   128 LNRFFPANGVRSCEGISESLIAFQVTELKDGVFIGFGYNHIVADGSSFWSFFNTWSEICF 187

Query:   136 GFSFDCIATSISTPPVLECWFPRNIDCPILIP 167
                FD        P +L  WF   I+ PI IP
Sbjct:   188 N-GFDADHRRKFPPLLLRGWFLDGIEYPIRIP 218
GO:0005737 "cytoplasm" evidence=ISM
GO:0016740 "transferase activity" evidence=ISS
GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA
TAIR|locus:2074775 AT3G50270 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2155573 EPS1 "ENHANCED PSEUDOMONAS SUSCEPTIBILTY 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2074820 AT3G50300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2074790 AT3G50280 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2176672 AT5G38130 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2150044 AT5G01210 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2061191 AT2G39980 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2142828 AT5G07870 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2160001 AT5G42830 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.3.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00019528001
SubName- Full=Chromosome chr7 scaffold_20, whole genome shotgun sequence; (448 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query321
pfam02458432 pfam02458, Transferase, Transferase family 5e-29
PLN02481436 PLN02481, PLN02481, Omega-hydroxypalmitate O-ferul 6e-09
PLN03157447 PLN03157, PLN03157, spermidine hydroxycinnamoyl tr 3e-05
PLN02663431 PLN02663, PLN02663, hydroxycinnamoyl-CoA:shikimate 0.001
>gnl|CDD|217048 pfam02458, Transferase, Transferase family Back     alignment and domain information 
 Score =  115 bits (289), Expect = 5e-29
 Identities = 90/398 (22%), Positives = 126/398 (31%), Gaps = 107/398 (26%)

Query: 12  KSNGEIILIHHLKISHSRALDLLYPLAGRFATTYHHHDNTISFFVDCNTAGVDFVHVAAD 71
               +      LK S S  L   YPLAGR               +DCN  G DFV   AD
Sbjct: 47  SEFSDETPSEKLKTSLSETLVSYYPLAGRLR------SPGGRLEIDCNDEGADFVEARAD 100

Query: 72  GV--SVADILEPIYVLEN--------IEGTSKTFLEVQVAKLK-NRIFLACSTNISLVDG 120
                  D  +P   LE          EG +   L VQV K K     + CS N ++ DG
Sbjct: 101 VELSDFLDGEDPDDSLELLLPDLAVSSEGENWPLLAVQVTKFKCGGFAIGCSVNHAIADG 160

Query: 121 TSIWQFFQSWSEIRRGFSFDCIATSISTPPVL--ECWFPRN--------------IDCPI 164
            S+  F  SW+E+ RG          S  PV   E   PRN                 PI
Sbjct: 161 YSLSTFMNSWAELARG------GKKPSVTPVFRRELLLPRNPPQVKFDHHEFDIFPPEPI 214

Query: 165 LIPKEKLS------------LQQLVA-------CNQP-------------------LDPE 186
               E +S            L++L                                LDPE
Sbjct: 215 TTLDEVVSKSFVFEKLSISALEKLKTKANSSSNGKPRTRFEVVTALLWRCATKARKLDPE 274

Query: 187 VDVNCLLSIGVRTRLQPQLPQEYVGNIV------QRGRDNESES---------------- 224
            +     ++ +R+RL P LP  Y GN            + ES                  
Sbjct: 275 EETVLGQAVNIRSRLNPPLPPGYFGNAYFSVVAKSTAAELESNPLGWIAELVKEAKKKVI 334

Query: 225 -----GKGATWNLTTNPLTEY---GTGSNASAISNSPRFDVYGNDFGWGKPIAVTGGSAS 276
                     W   + PL  +        A  +S+  RF  Y  DFGWGKP+ V      
Sbjct: 335 DDEYLESVIDWVENSLPLKGFYEGTKDDPAFLVSSWCRFPFYEVDFGWGKPVYVGPVVPP 394

Query: 277 KRNGKATTSARVEKASADIEIRLSVETLQRLQNDAQFM 314
             +      +  +    ++ + L  E + + + + + +
Sbjct: 395 FGDIVLLIPSPGDDGGVEVAVCLPEEAMSKFEKEFELL 432

This family includes a number of transferase enzymes. These include anthranilate N-hydroxycinnamoyl/benzoyltransferase that catalyzes the first committed reaction of phytoalexin biosynthesis. Deacetylvindoline 4-O-acetyltransferase EC:2.3.1.107 catalyzes the last step in vindoline biosynthesis is also a member of this family. The motif HXXXD is probably part of the active site. The family also includes trichothecene 3-O-acetyltransferase. Length = 432
>gnl|CDD|215266 PLN02481, PLN02481, Omega-hydroxypalmitate O-feruloyl transferase Back     alignment and domain information
>gnl|CDD|178702 PLN03157, PLN03157, spermidine hydroxycinnamoyl transferase; Provisional Back     alignment and domain information
>gnl|CDD|166304 PLN02663, PLN02663, hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 321
PLN03157447 spermidine hydroxycinnamoyl transferase; Provision 100.0
PLN00140444 alcohol acetyltransferase family protein; Provisio 100.0
PLN02663431 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinn 100.0
PLN02481436 Omega-hydroxypalmitate O-feruloyl transferase 100.0
PF02458432 Transferase: Transferase family; InterPro: IPR0034 100.0
PRK09294416 acyltransferase PapA5; Provisional 98.07
PF00668301 Condensation: Condensation domain; InterPro: IPR00 97.11
COG4908439 Uncharacterized protein containing a NRPS condensa 97.03
TIGR02946 446 acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT. This b 96.7
PF03007263 WES_acyltransf: Wax ester synthase-like Acyl-CoA a 95.68
PRK10252 1296 entF enterobactin synthase subunit F; Provisional 93.44
PRK12316 5163 peptide synthase; Provisional 90.88
PRK12316 5163 peptide synthase; Provisional 89.87
PRK12467 3956 peptide synthase; Provisional 89.82
PRK12467 3956 peptide synthase; Provisional 89.58
PRK05691 4334 peptide synthase; Validated 89.37
PF07247 480 AATase: Alcohol acetyltransferase; InterPro: IPR01 88.93
PRK05691 4334 peptide synthase; Validated 86.92
>PLN03157 spermidine hydroxycinnamoyl transferase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.7e-59  Score=456.09  Aligned_cols=290  Identities=24%  Similarity=0.339  Sum_probs=231.3

Q ss_pred             EEEEEecCC---cchHHHHHHHHHHHHhhhhccCCceEeeecCCCCCeeEEEEEeCCCCccEEEEEcCCCChhhhcC--C
Q 039380            7 SVIGMKSNG---EIILIHHLKISHSRALDLLYPLAGRFATTYHHHDNTISFFVDCNTAGVDFVHVAADGVSVADILE--P   81 (321)
Q Consensus         7 ~v~~y~~~~---~~~~~~~Lk~sLs~~L~~~p~laGrl~~~~~~~~g~~~~~i~c~~~gv~f~~a~~d~~~l~~~~~--p   81 (321)
                      .||||+.++   ..+++++||+||+++|++||||||||+.++   +|  +++|+||++||+|+||+++ ++++|+..  |
T Consensus        38 ~v~fy~~~~~~~~~~~~~~Lk~sLs~~L~~fyplAGRl~~~~---~g--~~~i~c~~~Gv~fveA~~~-~~l~~~~~~~~  111 (447)
T PLN03157         38 TIYFYSPPWNTSSGSIIEILKDSLSRALVPFYPLAGRLRWIG---GG--RLELECNAMGVLLIEAESE-AKLDDFGDFSP  111 (447)
T ss_pred             EEEEEeCCCccccccHHHHHHHHHHHHHhhccccCEEEEEcC---CC--cEEEEECCCCeEEEEEEeC-CcHHHhhccCC
Confidence            689998542   235689999999999999999999999876   57  8999999999999999999 99999964  2


Q ss_pred             c-ee--ecCC---C--CCCcceEEEEEEeec-CeEEEEEecccccccchhHHHHHHHHHHHHcCCCCCCcCCCCCCCCcc
Q 039380           82 I-YV--LENI---E--GTSKTFLEVQVAKLK-NRIFLACSTNISLVDGTSIWQFFQSWSEIRRGFSFDCIATSISTPPVL  152 (321)
Q Consensus        82 ~-~~--~~~~---~--~~~~pll~vQvt~f~-gG~~lg~~~~H~v~Dg~g~~~fl~~wa~~~rg~~~~~~~~~~~~~P~~  152 (321)
                      . .+  ++|.   .  ....|+++||||.|. ||++||+++||.++||.|+.+||++||++|||..       ...+|++
T Consensus       112 ~~~~~~l~P~~~~~~~~~~~Pll~vQvT~F~cGG~~lg~~~~H~v~Dg~~~~~fl~aWA~~~rg~~-------~~~~P~~  184 (447)
T PLN03157        112 TPEFEYLIPSVDYTKPIHELPLLLVQLTKFSCGGISLGLGISHAVADGQSALHFISEWARIARGEP-------LGTVPFL  184 (447)
T ss_pred             CHHHHhhcCCCCcccccccCceEEEEEEEecCCCEEEEEEeeccccchHhHHHHHHHHHHHhcCCC-------CCCCCcc
Confidence            1 12  3332   1  235799999999999 9999999999999999999999999999999975       2356888


Q ss_pred             cCCCCCCCCCCcc---------------------------------CCCC-------C---------------chHHhhH
Q 039380          153 ECWFPRNIDCPIL---------------------------------IPKE-------K---------------LSLQQLV  177 (321)
Q Consensus       153 dr~~l~~~~~p~~---------------------------------~p~~-------K---------------St~d~l~  177 (321)
                      ||+++.++++|..                                 +-|+       |               |++|+|+
T Consensus       185 dR~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fs~~~i~~LK~~a~~~~~~~~~~~~St~dals  264 (447)
T PLN03157        185 DRKVLRAGEPPLSAPVFDHAEFSHPPLLIGEQDNVEERKKKTTVAMLKLSKDQVEKLKDKANESRSSDNGRPYTRYETVA  264 (447)
T ss_pred             CcccccCCCCCCcCCccChhhcccCcccccccccccccccCceEEEEEECHHHHHHHHHhCcccccccCCCCccHHHHHH
Confidence            8875543332200                                 0010       0               8999999


Q ss_pred             H-------hcCCCCCCCcEEEEEEeccCCCCCCCCCCCCccceeeeeecc-------CCchHhhHHH----------hHh
Q 039380          178 A-------CNQPLDPEVDVNCLLSIGVRTRLQPQLPQEYVGNIVQRGRDN-------ESESGKGATW----------NLT  233 (321)
Q Consensus       178 A-------rar~~~~~~~~~l~~~vd~R~rl~pplp~~y~GN~~~~~~~~-------~~~L~~~a~~----------~~~  233 (321)
                      |       |||+..+++.+.+.++||+|+|++||+|++||||++..+.+.       +.+|+++|..          +|+
T Consensus       265 A~lWr~~~rAr~~~~~~~~~l~~~vd~R~rl~Pplp~~Y~GN~v~~~~~~~~~~el~~~~l~~~a~~Ir~ai~~~~~e~~  344 (447)
T PLN03157        265 GHVWRSACKARGHEPEQPTALGICVDSRSRMQPPLPDGYFGNATLDVIAESTSGELVSKPLGYASSKIREAIEKVTNEYV  344 (447)
T ss_pred             HHHHHHHHHHccCCCCCceEEEEEecCCCCCCCCCCCCcccceeeeccchhhHHHHhhCCHHHHHHHHHHHHHHhHHHHH
Confidence            9       778877888999999999999999999999999999987654       3678777731          133


Q ss_pred             c-------CCCcccC--------------CCCCcEEEecCCCCccccccccCCccceeecCCCCCCCcEEEEEeeCC-CC
Q 039380          234 T-------NPLTEYG--------------TGSNASAISNSPRFDVYGNDFGWGKPIAVTGGSASKRNGKATTSARVE-KA  291 (321)
Q Consensus       234 ~-------~~~~~~~--------------~~~~~~~vssw~~~~~y~~DFG~G~P~~v~~~~~~~~~g~~~i~p~~~-~g  291 (321)
                      +       ...+...              .+..++.+|||+||++|++|||||||.++++... ..+|.++++|+++ +|
T Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vssw~~~~~y~~DFGwGkp~~~~p~~~-~~~g~~~l~~~~~~~g  423 (447)
T PLN03157        345 QSAIDYLKNQEDLTRFQDLHALGGAEGPFYGNPNLGVVSWLTLPIYGLDFGWGKEIYMGPGTH-DFDGDSLLLPGQNEDG  423 (447)
T ss_pred             HHHHHHHhhCccchhhhcccccccccccccCCCceEEeecccCCccccccCCCccceeccccc-CCCceEEEeecCCCCC
Confidence            3       2222100              0235789999999999999999999999877432 4689999999887 78


Q ss_pred             eEEEEEecCHHHHHHHHcC
Q 039380          292 SADIEIRLSVETLQRLQND  310 (321)
Q Consensus       292 g~ev~v~L~~~~m~~l~~d  310 (321)
                      ||+|.|+|++++|++|++.
T Consensus       424 ~iev~v~L~~~~M~~f~~~  442 (447)
T PLN03157        424 SVILALCLQVAHMEAFKKF  442 (447)
T ss_pred             cEEEEEEcCHHHHHHHHHH
Confidence            8999999999999999864

>PLN00140 alcohol acetyltransferase family protein; Provisional Back     alignment and domain information
>PLN02663 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase Back     alignment and domain information
>PLN02481 Omega-hydroxypalmitate O-feruloyl transferase Back     alignment and domain information
>PF02458 Transferase: Transferase family; InterPro: IPR003480 This family includes a number of transferase enzymes Back     alignment and domain information
>PRK09294 acyltransferase PapA5; Provisional Back     alignment and domain information
>PF00668 Condensation: Condensation domain; InterPro: IPR001242 This domain is found in many multi-domain enzymes which synthesize peptide antibiotics Back     alignment and domain information
>COG4908 Uncharacterized protein containing a NRPS condensation (elongation) domain [General function prediction only] Back     alignment and domain information
>TIGR02946 acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT Back     alignment and domain information
>PF03007 WES_acyltransf: Wax ester synthase-like Acyl-CoA acyltransferase domain; InterPro: IPR004255 This entry represents the N terminus (approximately 170 residues) of a number of hypothetical plant proteins Back     alignment and domain information
>PRK10252 entF enterobactin synthase subunit F; Provisional Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>PF07247 AATase: Alcohol acetyltransferase; InterPro: IPR010828 This family contains a number of alcohol acetyltransferase (2 Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query321
2xr7_A453 Crystal Structure Of Nicotiana Tabacum Malonyltrans 1e-05
4g2m_A439 Structure Of A Lys-Hct Mutant From Coffea Canephora 6e-05
4g22_A439 Structure Of A Lys-Hct Mutant From Coffea Canephora 6e-05
4g0b_A436 Structure Of Native Hct From Coffea Canephora Lengt 7e-05
>pdb|2XR7|A Chain A, Crystal Structure Of Nicotiana Tabacum Malonyltransferase (Ntmat1) Complexed With Malonyl-Coa Length = 453 Back     alignment and structure 
Iteration: 1

 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 2/143 (1%)
Query: 180 NQPLDPEVDVNCLLSIGVRTRLQPQLPQEYVGNIVQRGRDNESESGKGATWNLTTNPLTE 239
           N PL P    N L+    RTR      +E     V+   +   +  K   W L+ +   E
Sbjct: 311 NPPLPPSYFGNALVGYVARTRQVDLAGKEGFTIAVELIGEAIRKRXKDEEWILSGSWFKE 370
Query: 240 YGT--GSNASAISNSPRFDVYGNDFGWGKPIAVTGGSASKRNGKATTSARVEKASADIEI 297
           Y       + +++ SP+ D+Y  DFGWG+P  +   S    +G + + ++ + +  D+EI
Sbjct: 371 YDKVDAKRSLSVAGSPKLDLYAADFGWGRPEKLEFVSIDNDDGISXSLSKSKDSDGDLEI 430
Query: 298 RLSVETLQRLQNDAQFMDAASVI 320
            LS+   +     A F    S +
Sbjct: 431 GLSLSKTRXNAFAAXFTHGISFL 453
>pdb|4G2M|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora (Crystal Form 2) Length = 439 Back     alignment and structure
>pdb|4G22|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora (Crystal Form 1) Length = 439 Back     alignment and structure
>pdb|4G0B|A Chain A, Structure Of Native Hct From Coffea Canephora Length = 436 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query321
2xr7_A453 Malonyltransferase; xenobiotics, naphthols; HET: M 5e-38
2e1v_A454 Acyl transferase; BAHD superfamily, seleno-methion 1e-36
2bgh_A421 Vinorine synthase; VS, BAHD, acetyltransferase, au 3e-36
4g22_A439 Hydroxycinnamoyl-COA shikimate/quinate hydroxycinn 4e-36
2rkv_A451 Trichothecene 3-O-acetyltransferase; BAHD superfam 2e-31
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum} Length = 453 Back     alignment and structure
 Score =  139 bits (352), Expect = 5e-38
 Identities = 65/401 (16%), Positives = 113/401 (28%), Gaps = 102/401 (25%)

Query: 19  LIHHLKISHSRALDLLYPLAGRFATTYHHHDNTISFFVDCNTAGVDFVHVAADGVSVADI 78
           +I  LK S S  L    PLAG  A            +V  N+  V F     D   +   
Sbjct: 56  IIPTLKDSLSLTLKYYLPLAGNVACPQDWSGYPELRYVTGNSVSVIFSESDMDFNYLIGY 115

Query: 79  LEP-----------IYVLENIEGTSKT-FLEVQVAKLKNR-IFLACSTNISLVDGTSIWQ 125
                         +   ++  G      L +QV    N  I +  + +    DG +I +
Sbjct: 116 HPRNTKDFYHFVPQLAEPKDAPGVQLAPVLAIQVTLFPNHGISIGFTNHHVAGDGATIVK 175

Query: 126 FFQSWSEIRRGFSFDCIATSISTPPVLECWF---PRNIDCPILIPKEKL----------- 171
           F ++W+ + +    D    +    P  +      P  +   I    +K            
Sbjct: 176 FVRAWALLNKFGG-DEQFLANEFIPFYDRSVIKDPNGVGMSIWNEMKKYKHMMKMSDVVT 234

Query: 172 ----------------------------------SLQQLVAC------------NQPLDP 185
                                             S     A              + +D 
Sbjct: 235 PPDKVRGTFIITRHDIGKLKNLVLTRRPKLTHVTSFTVTCAYVWTCIIKSEAATGEEIDE 294

Query: 186 EVDVNCLLSIGVRTRLQPQLPQEYVGNIVQRG----------------------RDNESE 223
                   +   R +  P LP  Y GN +                          +   +
Sbjct: 295 NGMEFFGCAADCRAQFNPPLPPSYFGNALVGYVARTRQVDLAGKEGFTIAVELIGEAIRK 354

Query: 224 SGKGATWNLTTNPLTEYG--TGSNASAISNSPRFDVYGNDFGWGKPIAVTGGSASKRNGK 281
             K   W L+ +   EY       + +++ SP+ D+Y  DFGWG+P  +   S    +G 
Sbjct: 355 RMKDEEWILSGSWFKEYDKVDAKRSLSVAGSPKLDLYAADFGWGRPEKLEFVSIDNDDGI 414

Query: 282 AT--TSARVEKASADIEIRLSVETLQRLQNDAQFMDAASVI 320
           +   + ++      +I + LS   +      A F    S +
Sbjct: 415 SMSLSKSKDSDGDLEIGLSLSKTRMNAFA--AMFTHGISFL 453
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A Length = 454 Back     alignment and structure
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina} Length = 421 Back     alignment and structure
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A Length = 439 Back     alignment and structure
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A* Length = 451 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query321
4g22_A439 Hydroxycinnamoyl-COA shikimate/quinate hydroxycinn 100.0
2bgh_A421 Vinorine synthase; VS, BAHD, acetyltransferase, au 100.0
2xr7_A453 Malonyltransferase; xenobiotics, naphthols; HET: M 100.0
2e1v_A454 Acyl transferase; BAHD superfamily, seleno-methion 100.0
2rkv_A451 Trichothecene 3-O-acetyltransferase; BAHD superfam 100.0
1q9j_A422 PAPA5, polyketide synthase associated protein 5; c 97.35
4hvm_A 493 Tlmii; PSI-biology, midwest center for structural 97.02
2jgp_A520 Tyrocidine synthetase 3; multifunctional enzyme, a 96.68
1l5a_A 436 Amide synthase, VIBH; nonribosomal peptide synthet 96.43
2xhg_A 466 Tyrocidine synthetase A; isomerase, nonribosomal p 95.66
2vsq_A 1304 Surfactin synthetase subunit 3; ligase, peptidyl c 95.25
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A Back     alignment and structure
Probab=100.00  E-value=7.5e-60  Score=456.58  Aligned_cols=290  Identities=26%  Similarity=0.355  Sum_probs=237.1

Q ss_pred             EEEEEecCC--cchHHHHHHHHHHHHhhhhccCCceEeeecCCCCCeeEEEEEeCCCCccEEEEEcCCCChhhhcC--Cc
Q 039380            7 SVIGMKSNG--EIILIHHLKISHSRALDLLYPLAGRFATTYHHHDNTISFFVDCNTAGVDFVHVAADGVSVADILE--PI   82 (321)
Q Consensus         7 ~v~~y~~~~--~~~~~~~Lk~sLs~~L~~~p~laGrl~~~~~~~~g~~~~~i~c~~~gv~f~~a~~d~~~l~~~~~--p~   82 (321)
                      .|+||+.++  ....+++||+||+++|++||||||||+.++   +|  +++|+||++||.|+||++| ++++|+..  |.
T Consensus        43 ~~~~y~~~~~~~~~~~~~Lk~sLs~~L~~f~plAGRl~~~~---~g--~~~i~c~~~Gv~fv~A~~d-~~l~~l~~~~p~  116 (439)
T 4g22_A           43 SVYFYRPTGSSNFFDAKVLKDALSRALVPFYPMAGRLKRDE---DG--RIEIECNGEGVLFVEAESD-GVVDDFGDFAPT  116 (439)
T ss_dssp             EEEEECCCSCTTTTCHHHHHHHHHHHTTTTGGGGCEEEECT---TS--CEEEECCCCCEEEEEEEES-SCGGGGTTCCCC
T ss_pred             eEEEEcCCCCccccHHHHHHHHHHHHHhhccccceeeeeCC---CC--CEEEEECCCCCEEEEEEcC-CcHHHhcCCCCC
Confidence            689998643  235689999999999999999999999876   57  8999999999999999999 89999864  32


Q ss_pred             -ee--ecC---CC--CCCcceEEEEEEeec-CeEEEEEecccccccchhHHHHHHHHHHHHcCCCCCCcCCCCCCCCccc
Q 039380           83 -YV--LEN---IE--GTSKTFLEVQVAKLK-NRIFLACSTNISLVDGTSIWQFFQSWSEIRRGFSFDCIATSISTPPVLE  153 (321)
Q Consensus        83 -~~--~~~---~~--~~~~pll~vQvt~f~-gG~~lg~~~~H~v~Dg~g~~~fl~~wa~~~rg~~~~~~~~~~~~~P~~d  153 (321)
                       .+  ++|   ..  ..+.|++.||||+|+ ||++||+++||.++||.|+++|+++||++|||..       ...+|++|
T Consensus       117 ~~~~~l~p~~~~~~~~~~~pll~vQvT~f~cGG~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~rg~~-------~~~~P~~d  189 (439)
T 4g22_A          117 LELRRLIPAVDYSQGISSYALLVLQVTYFKCGGVSLGVGMRHHAADGFSGLHFINSWSDMARGLD-------VTLPPFID  189 (439)
T ss_dssp             GGGGGGSCCCCTTSCTTSSCSEEEEEEECTTSCEEEEEEECTTTCCHHHHHHHHHHHHHHHTTCC-------CSSCCBCC
T ss_pred             HHHHhcCCCCCcccccccCceeEEEEEEecCCCEEEEEEeeeccCcHHHHHHHHHHHHHHhCCCC-------CCCCCccc
Confidence             12  232   21  146799999999999 9999999999999999999999999999999965       34678999


Q ss_pred             CCCCCCCCCCcc----------------------CC----------CC-------C------------chHHhhHH----
Q 039380          154 CWFPRNIDCPIL----------------------IP----------KE-------K------------LSLQQLVA----  178 (321)
Q Consensus       154 r~~l~~~~~p~~----------------------~p----------~~-------K------------St~d~l~A----  178 (321)
                      |+++++++||..                      .+          |+       |            ||||+|+|    
T Consensus       190 r~~l~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fs~~~i~~LK~~a~~~~~~~~~St~dal~A~iWr  269 (439)
T 4g22_A          190 RTLLRARDPPQPQFQHIEYQPPPALAVSPQTAASDSVPETAVSIFKLTREQISALKAKSKEDGNTISYSSYEMLAGHVWR  269 (439)
T ss_dssp             GGGGCCCSSCCCSSCCGGGSCCC---------------CEEEEEEEECHHHHHHHHHGGGGGGCCCCCCHHHHHHHHHHH
T ss_pred             cccccCCCCCCCCcCcccccCCCCCcccccccccCCcccceEEEEEECHHHHHHHHHHhhccCCCCCccHHHHHHHHHHH
Confidence            987765443310                      01          11       1            89999999    


Q ss_pred             ---hcCCCCCCCcEEEEEEeccCCCCCCCCCCCCccceeeeeecc-------CCchHhhHHH----------h-------
Q 039380          179 ---CNQPLDPEVDVNCLLSIGVRTRLQPQLPQEYVGNIVQRGRDN-------ESESGKGATW----------N-------  231 (321)
Q Consensus       179 ---rar~~~~~~~~~l~~~vd~R~rl~pplp~~y~GN~~~~~~~~-------~~~L~~~a~~----------~-------  231 (321)
                         |||++++++.+++.++||+|+|++||+|++||||++..+.+.       +++|+++|+.          +       
T Consensus       270 ~~~rAr~~~~~~~~~l~~~vd~R~rl~Pplp~~Y~GN~v~~~~~~~~~~el~~~~L~~~A~~Ir~ai~~~~~e~~~~~~~  349 (439)
T 4g22_A          270 CACKARGLEVDQGTKLYIATDGRARLRPSLPPGYFGNVIFTATPIAIAGDLEFKPVWYAASKIHDALARMDNDYLRSALD  349 (439)
T ss_dssp             HHHHHTTCCTTCEEEEEEEEECTTTSSSCCCTTBCSCCEEEECCEEEHHHHHHSCHHHHHHHHHHHHHTCSHHHHHHHHH
T ss_pred             HHHHhcCCCCCCcEEEEEEEcccCCCCCCCCCCcccceeehhhcceEHHHHhhCcHHHHHHHHHHHHHhhCHHHHHHHHH
Confidence               788888889999999999999999999999999999887664       5788888741          1       


Q ss_pred             HhcCCCcccCC-------CCCcEEEecCCCCccccccccCCccceeecCCCCCCCcEEEEEeeCC-CCeEEEEEecCHHH
Q 039380          232 LTTNPLTEYGT-------GSNASAISNSPRFDVYGNDFGWGKPIAVTGGSASKRNGKATTSARVE-KASADIEIRLSVET  303 (321)
Q Consensus       232 ~~~~~~~~~~~-------~~~~~~vssw~~~~~y~~DFG~G~P~~v~~~~~~~~~g~~~i~p~~~-~gg~ev~v~L~~~~  303 (321)
                      |++...+....       ...++.+|||+|+++|++|||||||+++++... ..+|.++++|+++ +||++|.|+|++++
T Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~~~vssw~r~~~y~~DFGwGkP~~~~~~~~-~~~g~~~~~p~~~~~ggi~v~v~L~~~~  428 (439)
T 4g22_A          350 YLELQPDLKALVRGAHTFKCPNLGITSWVRLPIHDADFGWGRPIFMGPGGI-AYEGLSFILPSPTNDGSMSVAISLQGEH  428 (439)
T ss_dssp             HHHTCSCSTTCCCCHHHHCTTCEEEEECTTSCTTCCCCSSCCCSEEEESSC-CSTTEEEEEECTTCSSCEEEEEEEEHHH
T ss_pred             HHHhCccchhhcccCCcCcCCcEEEeecCcCCccccccCCCCcceeecccc-CCCcEEEEeecCCCCCcEEEEEECCHHH
Confidence            44433322111       356899999999999999999999999987543 4689999999976 88999999999999


Q ss_pred             HHHHHcC
Q 039380          304 LQRLQND  310 (321)
Q Consensus       304 m~~l~~d  310 (321)
                      |++|++.
T Consensus       429 m~~f~~~  435 (439)
T 4g22_A          429 MKLFQSF  435 (439)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999864
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina} Back     alignment and structure
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum} Back     alignment and structure
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A Back     alignment and structure
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A* Back     alignment and structure
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2 Back     alignment and structure
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus} Back     alignment and structure
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis} Back     alignment and structure
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2 Back     alignment and structure
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis} Back     alignment and structure
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query321
d1q9ja1175 Polyketide synthase associated protein 5, PapA5 {M 97.42
d1l5aa1174 VibH {Vibrio cholerae [TaxId: 666]} 97.21
d1q23a_214 Chloramphenicol acetyltransferase, CAT {Escherichi 81.2
d3claa_213 Chloramphenicol acetyltransferase, CAT {Escherichi 81.02
>d1q9ja1 c.43.1.2 (A:1-175) Polyketide synthase associated protein 5, PapA5 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: CoA-dependent acyltransferases
superfamily: CoA-dependent acyltransferases
family: NRPS condensation domain (amide synthase)
domain: Polyketide synthase associated protein 5, PapA5
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.42  E-value=0.00085  Score=53.33  Aligned_cols=109  Identities=10%  Similarity=0.030  Sum_probs=65.1

Q ss_pred             HHHHHHHHHHHHhhhhccCCceEeeecCCCCCeeEEEEEeCC-CCccEEEEEcCCCChhhhcCCceeecCCCCCCcceEE
Q 039380           19 LIHHLKISHSRALDLLYPLAGRFATTYHHHDNTISFFVDCNT-AGVDFVHVAADGVSVADILEPIYVLENIEGTSKTFLE   97 (321)
Q Consensus        19 ~~~~Lk~sLs~~L~~~p~laGrl~~~~~~~~g~~~~~i~c~~-~gv~f~~a~~d~~~l~~~~~p~~~~~~~~~~~~pll~   97 (321)
                      -++.|++++..++..++.|-.+++.++   ++  .+...... .-......+.+.....+....  ..++. ..+.|+..
T Consensus        35 d~~~l~~A~~~lv~rh~~LRt~f~~~~---~~--~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~l-~~~~~l~~  106 (175)
T d1q9ja1          35 DVDALSDAFDALLETHPVLASHLEQSS---DG--GWNLVADDLLHSGICVIDGTAATNGSPSGN--AELRL-DQSVSLLH  106 (175)
T ss_dssp             CHHHHHHHHHHHHHHCGGGSEEEEECT---TS--SEEEEECCSSSCCCEEEC--------------CCCCC-CTTTCSEE
T ss_pred             CHHHHHHHHHHHHHhchhheEEEEEeC---Ce--eEEEEECCCCCccEEEEEcccchhHHHHhh--cccCc-cCCCCeEE
Confidence            478999999999999999999998765   34  33322222 111222222110000000000  01111 13456666


Q ss_pred             EEEEeecCeEEEEEecccccccchhHHHHHHHHHHHHc
Q 039380           98 VQVAKLKNRIFLACSTNISLVDGTSIWQFFQSWSEIRR  135 (321)
Q Consensus        98 vQvt~f~gG~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r  135 (321)
                      +.+..-.++..+.+.+||.++||.|+..|++.+.+...
T Consensus       107 ~~i~~~~~~~~l~l~~HH~i~Dg~S~~~ll~el~~~Y~  144 (175)
T d1q9ja1         107 LQLILREGGAELTLYLHHCMADGHHGAVLVDELFSRYT  144 (175)
T ss_dssp             EEEECCSSSCEEEEEEEGGGCCHHHHHHHHHHHHHHHH
T ss_pred             EEEEecCCeEEEEEEccccccCHhHHHHHHHHHHHHHH
Confidence            55554457778889999999999999999999876664
>d1l5aa1 c.43.1.2 (A:1-174) VibH {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1q23a_ c.43.1.1 (A:) Chloramphenicol acetyltransferase, CAT {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d3claa_ c.43.1.1 (A:) Chloramphenicol acetyltransferase, CAT {Escherichia coli [TaxId: 562]} Back     information, alignment and structure