Citrus Sinensis ID: 039452

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160----
Protein Sequence
PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNVGADE
Secondary Structure (PSIPRED)
ccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccccccccccHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
cccEEEcccccccHcHcccccccccccccEEEEEEEEEEcccccHHHHHcccccccccHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHcHHHcccccccccccHHHHHHHHHHHHHHHHccHcccccHHHHHHHHHHHHHcccccccccc
Coil and Loop (DISEMBL)
psnvllddnmvahLSDFGIAKlligedqsmtqTQTLATIGymapveygregrvstngdvYSFGIMLMEAFtrkkptdemfsgEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMectiesperrINAKEIVTELSKIRDSLFRNVGADE
Flexible Loop (DISEMBL)
psnvllddNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMEctiesperrinAKEIVTelskirdslfrnvgade
Low Complexity Region (SEG)
PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNVGADE
Disordered region (IsUnstruct)
****LLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI************
Disordered Region (DISOPRED)
PSNVLLDDNMVAHLSDFGIAKLLI**********TLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL*RN*****
Disordered Region (DISEMBL)
PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNVGADE
Disordered Region (DISPRO)
*SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDS*********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNVGADE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	164	2.2.26 [Sep-21-2011]
C0LGP4	1010	Probable LRR receptor-lik	yes	no	0.957	0.155	0.423	8e-32
Q9SD62	1025	Putative receptor-like pr	no	no	0.963	0.154	0.393	2e-27
C0LGT6	1031	LRR receptor-like serine/	no	no	0.884	0.140	0.395	2e-24
Q9FIZ3	1252	LRR receptor-like serine/	no	no	0.865	0.113	0.356	3e-19
Q9SKB2	641	Leucine-rich repeat recep	no	no	0.890	0.227	0.346	6e-19
C0LGQ5	1249	LRR receptor-like serine/	no	no	0.871	0.114	0.379	1e-18
P93194	1109	Receptor-like protein kin	N/A	no	0.902	0.133	0.346	1e-18
Q9FL28	1173	LRR receptor-like serine/	no	no	0.908	0.127	0.370	7e-18
Q9SYM9	355	Receptor-like serine/thre	no	no	0.908	0.419	0.387	1e-17
Q9ZRF9	540	Probable LRR receptor-lik	no	no	0.896	0.272	0.377	2e-17

>sp|C0LGP4|Y3475_ARATH Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=1 SV=1

 Score =  135 bits (341), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 69/163 (42%), Positives = 100/163 (61%), Gaps = 6/163 (3%)

Query: 1    PSNVLLDDNMVAHLSDFGIAKLLIGEDQ-----SMTQTQTLATIGYMAPVEYGREGRVST 55
            PSNVLLDD++ AH+SDFG+A+LL+  D+      ++      TIGY AP EYG  G+ S 
Sbjct: 842  PSNVLLDDDLTAHVSDFGLARLLLKFDEESFFNQLSSAGVRGTIGYAAP-EYGVGGQPSI 900

Query: 56   NGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA 115
            NGDVYSFGI+L+E FT K+PT+E+F G  TL  +    L   ++++VD ++L    R   
Sbjct: 901  NGDVYSFGILLLEMFTGKRPTNELFGGNFTLNSYTKSALPERILDIVDESILHIGLRVGF 960

Query: 116  AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFR 158
               +C++ VF + + C  ESP  R+    +V EL  IR+  F+
Sbjct: 961  PVVECLTMVFEVGLRCCEESPMNRLATSIVVKELISIRERFFK 1003

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q9SD62|Y3471_ARATH Putative receptor-like protein kinase At3g47110 OS=Arabidopsis thaliana GN=At3g47110 PE=3 SV=1

 Score =  121 bits (304), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 65/165 (39%), Positives = 97/165 (58%), Gaps = 7/165 (4%)

Query: 1    PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-----TLATIGYMAPVEYGREGRVST 55
            PSN+LLD ++ AH+SDFG+A+LL+  D+     Q        TIGY AP EYG  G  S 
Sbjct: 859  PSNILLDKDLTAHVSDFGLAQLLLKFDRDTFHIQFSSAGVRGTIGYAAP-EYGMGGHPSI 917

Query: 56   NGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSV-SVMEVVDANLLTREDRHF 114
             GDVYSFGI+L+E FT K+PT+++F   +TL  +    L     +++ D  +L       
Sbjct: 918  MGDVYSFGIVLLEIFTGKRPTNKLFVDGLTLHSFTKSALQKRQALDITDETILRGAYAQH 977

Query: 115  AAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRN 159
                +C++ VF + + C+ ESP  RI+  E +++L  IR+S FR+
Sbjct: 978  FNMVECLTLVFRVGVSCSEESPVNRISMAEAISKLVSIRESFFRD 1022

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGT6|EFR_ARATH LRR receptor-like serine/threonine-protein kinase EFR OS=Arabidopsis thaliana GN=EFR PE=1 SV=1

 Score =  111 bits (277), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 64/162 (39%), Positives = 88/162 (54%), Gaps = 17/162 (10%)

Query: 1    PSNVLLDDNMVAHLSDFGIAKLLIGEDQ-----SMTQTQTLATIGYMAPVEYGREGRVST 55
            PSN+LLDD++ AH+SDFG+A+LL   D+       +      TIGY AP EYG  G+ S 
Sbjct: 852  PSNILLDDDLTAHVSDFGLAQLLYKYDRESFLNQFSSAGVRGTIGYAAP-EYGMGGQPSI 910

Query: 56   NGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA 115
             GDVYSFGI+L+E F+ KKPTDE F+G+  L  +   +LS        +N          
Sbjct: 911  QGDVYSFGILLLEMFSGKKPTDESFAGDYNLHSYTKSILS-GCTSSGGSN---------- 959

Query: 116  AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLF 157
            A  + +  V  + ++C+ E P  R+   E V EL  IR   F
Sbjct: 960  AIDEGLRLVLQVGIKCSEEYPRDRMRTDEAVRELISIRSKFF 1001

Constitutes the pattern-recognition receptor (PPR) that determines the specific perception of elongation factor Tu (EF-Tu), a potent elicitor of the defense response to pathogen-associated molecular patterns (PAMPs). Reduces transformation by Rhizobium radiobacter probably by inducing plant defense during the interaction. Binding to the effector AvrPto1 from P.syringae blocks the downstream plant immune response.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FIZ3|GSO2_ARATH LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2

 Score = 94.4 bits (233), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 52/146 (35%), Positives = 82/146 (56%), Gaps = 4/146 (2%)

Query: 2    SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL--ATIGYMAPVEYGREGRVSTNGDV 59
            SNVLLD N+ AHL DFG+AK+L G   + T++ T+   + GY+AP EY    + +   DV
Sbjct: 1083 SNVLLDSNIEAHLGDFGLAKILTGNYDTNTESNTMFAGSYGYIAP-EYAYSLKATEKSDV 1141

Query: 60   YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQ 119
            YS GI+LME  T K PT+ MF  E  + RW+  +L           L+  E +     ++
Sbjct: 1142 YSMGIVLMEIVTGKMPTEAMFDEETDMVRWVETVLDTPPGSEAREKLIDSELKSLLPCEE 1201

Query: 120  CVSF-VFNLAMECTIESPERRINAKE 144
              ++ V  +A++CT   P+ R ++++
Sbjct: 1202 EAAYQVLEIALQCTKSYPQERPSSRQ 1227

Together with GSO1, receptor-like serine/threonine-kinase required during the development of the epidermal surface in embryos and cotyledons. Involved in the nuclear division phase of megagametogenesis.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SKB2|SBIR1_ARATH Leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1 OS=Arabidopsis thaliana GN=SOBIR1 PE=1 SV=1

 Score = 93.2 bits (230), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 54/156 (34%), Positives = 94/156 (60%), Gaps = 10/156 (6%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P+NVLLDD+M A +SDFG+AK +      +T +    T+GY+AP E+ +  + +   D+Y
Sbjct: 492 PANVLLDDDMEARISDFGLAKAMPDAVTHITTSHVAGTVGYIAP-EFYQTHKFTDKCDIY 550

Query: 61  SFGIMLMEAFTRKKPTDEMF--SGEMTLKRWINDLL-SVSVMEVVDANLLTREDRHFAAK 117
           SFG++L      K P+DE F  + EM+L +W+ +++ S +    +D  L+   D+ F   
Sbjct: 551 SFGVILGILVIGKLPSDEFFQHTDEMSLIKWMRNIITSENPSLAIDPKLM---DQGF--- 604

Query: 118 QQCVSFVFNLAMECTIESPERRINAKEIVTELSKIR 153
            + +  V  +A  CT++ P++R N+K++ T LS+I+
Sbjct: 605 DEQMLLVLKIACYCTLDDPKQRPNSKDVRTMLSQIK 640

Dual specificity kinase acting on both serine/threonine-and tyrosine-containing substrates. Promotes the activation of plant defense and cell death. Functions as an inhibitor/regulator of abscission, probably by regulating membrane trafficking during abscission.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGQ5|GSO1_ARATH LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1

 Score = 92.4 bits (228), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 58/153 (37%), Positives = 83/153 (54%), Gaps = 10/153 (6%)

Query: 2    SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQT--LATIGYMAPVEYGREGRVSTNGDV 59
            SNVLLD NM AHL DFG+AK+L     + T + T    + GY+AP EY    + +   DV
Sbjct: 1088 SNVLLDSNMEAHLGDFGLAKVLTENCDTNTDSNTWFACSYGYIAP-EYAYSLKATEKSDV 1146

Query: 60   YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVM---EVVDANLLTREDRHFAA 116
            YS GI+LME  T K PTD +F  EM + RW+   L V+     +++D  L  +    F  
Sbjct: 1147 YSMGIVLMEIVTGKMPTDSVFGAEMDMVRWVETHLEVAGSARDKLIDPKL--KPLLPFEE 1204

Query: 117  KQQCVSFVFNLAMECTIESPERRINAKEIVTEL 149
               C   V  +A++CT  SP+ R ++++    L
Sbjct: 1205 DAACQ--VLEIALQCTKTSPQERPSSRQACDSL 1235

Together with GSO2, receptor-like serine/threonine-kinase required during the development of the epidermal surface in embryos and cotyledons.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P93194|RPK1_IPONI Receptor-like protein kinase OS=Ipomoea nil GN=INRPK1 PE=2 SV=2

 Score = 92.0 bits (227), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 53/153 (34%), Positives = 85/153 (55%), Gaps = 5/153 (3%)

Query: 1    PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
            P N+LLD ++  H+SDFGIAKLL     S+       TIGYMAP E       S   DVY
Sbjct: 945  PMNILLDSDLEPHISDFGIAKLLDQSATSIPSNTVQGTIGYMAP-ENAFTTVKSRESDVY 1003

Query: 61   SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVS--VMEVVDANLLTREDRHFAAKQ 118
            S+G++L+E  TRKK  D  F+GE  +  W+  + + +  + ++VD +LL         +Q
Sbjct: 1004 SYGVVLLELITRKKALDPSFNGETDIVGWVRSVWTQTGEIQKIVDPSLLDELIDSSVMEQ 1063

Query: 119  QCVSFVFNLAMECTIESPERRINAKEIVTELSK 151
              V+   +LA+ C  +  ++R   +++V +L++
Sbjct: 1064 --VTEALSLALRCAEKEVDKRPTMRDVVKQLTR 1094

Possible role in short-day photoperiod floral induction.

Ipomoea nil (taxid: 35883)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FL28|FLS2_ARATH LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana GN=FLS2 PE=1 SV=1

 Score = 89.7 bits (221), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 60/162 (37%), Positives = 95/162 (58%), Gaps = 13/162 (8%)

Query: 1    PSNVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQTL--ATIGYMAPVEYGREGRVSTNG 57
            P+N+LLD + VAH+SDFG A++L   ED S T + +    TIGY+AP E+    +V+T  
Sbjct: 1000 PANILLDSDRVAHVSDFGTARILGFREDGSTTASTSAFEGTIGYLAP-EFAYMRKVTTKA 1058

Query: 58   DVYSFGIMLMEAFTRKKPT--DEMFSGEMTLKRWINDLLS---VSVMEVVDANLLTREDR 112
            DV+SFGI++ME  T+++PT  ++  S +MTL++ +   +      ++ V+D  L    D 
Sbjct: 1059 DVFSFGIIMMELMTKQRPTSLNDEDSQDMTLRQLVEKSIGNGRKGMVRVLDMEL---GDS 1115

Query: 113  HFAAKQ-QCVSFVFNLAMECTIESPERRINAKEIVTELSKIR 153
              + KQ + +     L + CT   PE R +  EI+T L K+R
Sbjct: 1116 IVSLKQEEAIEDFLKLCLFCTSSRPEDRPDMNEILTHLMKLR 1157

Constitutes the pattern-recognition receptor (PPR) that determines the specific perception of flagellin (flg22), a potent elicitor of the defense response to pathogen-associated molecular patterns (PAMPs). Flagellin-binding to the receptor is the first step to initiate the innate immune MAP kinase signaling cascade (MEKK1, MKK4/MKK5 and MPK3/MPK6), resulting in enhanced resistance against pathogens. Binding to the effector AvrPto1 from Pseudomonas syringae blocks the downstream plant immune response.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SYM9|Y1853_ARATH Receptor-like serine/threonine-protein kinase At1g78530 OS=Arabidopsis thaliana GN=At1g78530 PE=2 SV=1

 Score = 89.0 bits (219), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/155 (38%), Positives = 84/155 (54%), Gaps = 6/155 (3%)

Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           SN+LLD NM A +SDFG+A L+   D++   T    T GY+AP EY   G+ +  GDVYS
Sbjct: 201 SNILLDHNMEARVSDFGLATLM-EPDKTHVSTFVAGTFGYLAP-EYFDTGKATMKGDVYS 258

Query: 62  FGIMLMEAFTRKKPTDEMFSGEMT-LKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           FG++L+E  T +KPTD+ F  E T L  W+  ++     EVV  N L         + + 
Sbjct: 259 FGVVLLELLTGRKPTDDEFFEEGTKLVTWVKGVVRDQREEVVIDNRLRGSS---VQENEE 315

Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDS 155
           ++ VF +AM C    P  R    E+V  L  I+ S
Sbjct: 316 MNDVFGIAMMCLEPEPAIRPAMTEVVKLLEYIKLS 350

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9ZRF9|RPK1_ARATH Probable LRR receptor-like serine/threonine-protein kinase RPK1 OS=Arabidopsis thaliana GN=RPK1 PE=1 SV=1

 Score = 88.6 bits (218), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 83/159 (52%), Gaps = 12/159 (7%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           PSN+LLD+N  A+LSDFG++KLL G  QS   T    T GY+AP EY    RVS   DVY
Sbjct: 388 PSNILLDNNYNAYLSDFGLSKLL-GTSQSHVTTGVAGTFGYVAP-EYAMTCRVSEKADVY 445

Query: 61  SFGIMLMEAFTRKKPTDEMFSGE---MTLKRWINDLLSVS-VMEVVDANLLTREDRHFAA 116
           S+GI+L+E  + K+  D  FS       +  W + +LS     EV    L          
Sbjct: 446 SYGIVLLELISDKRALDPSFSSHENGFNIVSWAHMMLSQGKAKEVFTTGLWE------TG 499

Query: 117 KQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDS 155
               +  V +LA++CT++S   R   K+ V  L +I+ S
Sbjct: 500 PPDDLVEVLHLALKCTVDSLSIRPTMKQAVRLLKRIQPS 538

Involved in the main abscisic acid-mediated (ABA) signaling pathway and in early ABA perception. Together with RPK2, required for pattern formation along the radial axis (e.g. the apical embryonic domain cell types that generate cotyledon primordia), and the apical-basal axis (e.g. differentiation of the basal pole during early embryogenesis).

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	164
359485453	1202	PREDICTED: probable LRR receptor-like se	0.932	0.127	0.602	1e-48
359485176	1160	PREDICTED: probable LRR receptor-like se	0.939	0.132	0.624	2e-48
147853795	1420	hypothetical protein VITISV_005816 [Viti	0.932	0.107	0.621	4e-48
359483683	1228	PREDICTED: LRR receptor-like serine/thre	0.939	0.125	0.624	1e-47
359485451	1454	PREDICTED: LRR receptor-like serine/thre	0.939	0.105	0.605	2e-47
302143440	929	unnamed protein product [Vitis vinifera]	0.939	0.165	0.605	4e-47
297740824	725	unnamed protein product [Vitis vinifera]	0.945	0.213	0.598	1e-46
297740829	1892	unnamed protein product [Vitis vinifera]	0.939	0.081	0.611	2e-46
147855067	646	hypothetical protein VITISV_024048 [Viti	0.939	0.238	0.585	2e-46
147843440	868	hypothetical protein VITISV_043680 [Viti	0.932	0.176	0.596	2e-46

>gi|359485453|ref|XP_003633276.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Vitis vinifera]

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 94/156 (60%), Positives = 121/156 (77%), Gaps = 3/156 (1%)

Query: 1    PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
            PSNVLLDD+MVAH+SDFGIAKLL+G  + M +T+TL T+GYMAP EYG EG VST GD+Y
Sbjct: 1044 PSNVLLDDDMVAHISDFGIAKLLMGS-EFMKRTKTLGTVGYMAP-EYGSEGIVSTKGDIY 1101

Query: 61   SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
            S+GI+LME F RKKPTDEMF  E+TLK W+    + ++MEV+DANLLT ED  FA K+ C
Sbjct: 1102 SYGILLMETFVRKKPTDEMFVEELTLKSWVESSTN-NIMEVIDANLLTEEDESFALKRAC 1160

Query: 121  VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
             S +  LA++CT+E PE+RIN K++V  L K+ + +
Sbjct: 1161 FSSIMTLALDCTVEPPEKRINTKDVVVRLKKLLNQI 1196

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359485176|ref|XP_002280075.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Vitis vinifera]

 Score =  197 bits (500), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 98/157 (62%), Positives = 117/157 (74%), Gaps = 3/157 (1%)

Query: 1    PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
            P+NVLLD+ MVA L DFGI+KLL  E +SM QT+TL TIGYMAP EYG EG VST GDVY
Sbjct: 1005 PNNVLLDEEMVARLGDFGISKLLT-ETESMEQTRTLGTIGYMAP-EYGSEGIVSTRGDVY 1062

Query: 61   SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
            S+GIM+ME F RKKPTDEMF GE+TL+ W+   L+  VMEVVD NL+ RED+HF  K+ C
Sbjct: 1063 SYGIMMMETFARKKPTDEMFGGEVTLRSWVES-LAGRVMEVVDGNLVRREDQHFGIKESC 1121

Query: 121  VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLF 157
            +  +  LA+ECT ESP  RI+ KE+V  L KIR  L 
Sbjct: 1122 LRSIMALALECTTESPRDRIDMKEVVVRLKKIRIKLL 1158

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147853795|emb|CAN81714.1| hypothetical protein VITISV_005816 [Vitis vinifera]

 Score =  196 bits (497), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 97/156 (62%), Positives = 119/156 (76%), Gaps = 3/156 (1%)

Query: 1    PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
            PSNVLLDD+MVAH+SDFGIAKLL+G  + M +T+TL TIGYMAP EYG EG VST  D Y
Sbjct: 1045 PSNVLLDDDMVAHISDFGIAKLLMGS-EFMKRTKTLGTIGYMAP-EYGSEGIVSTKCDTY 1102

Query: 61   SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
            S+GI+LME F RKKPTDEMF  E+TLK W+    + ++MEV+DANLLT ED  FA KQ C
Sbjct: 1103 SYGIILMEIFVRKKPTDEMFVEELTLKSWVESSAN-NIMEVIDANLLTEEDESFALKQAC 1161

Query: 121  VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
             S +  LA++CTIE PE+RIN K++V  L KI + +
Sbjct: 1162 FSSIMTLALDCTIEPPEKRINMKDVVARLKKILNQI 1197

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359483683|ref|XP_003633001.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1-like [Vitis vinifera]

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 98/157 (62%), Positives = 120/157 (76%), Gaps = 3/157 (1%)

Query: 1    PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
            PSNVLLD+NMVAH++DFGIA+LL  E +SM QT+TL TIGYMAP EYG +G VST GDVY
Sbjct: 1074 PSNVLLDNNMVAHVADFGIARLLT-ETESMQQTKTLGTIGYMAP-EYGSDGIVSTKGDVY 1131

Query: 61   SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
            S+GI+LME F RKKP DEMF+G++TLK W+   LS SV+EVVDANLL R+D   A K   
Sbjct: 1132 SYGILLMEVFARKKPMDEMFTGDVTLKTWVES-LSSSVIEVVDANLLRRDDEDLATKLSY 1190

Query: 121  VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLF 157
            +S +  LA+ CT +SPE RIN K++V EL KI+  L 
Sbjct: 1191 LSSLMALALACTADSPEERINMKDVVVELKKIKIKLL 1227

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359485451|ref|XP_002276944.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2-like [Vitis vinifera]

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 95/157 (60%), Positives = 119/157 (75%), Gaps = 3/157 (1%)

Query: 1    PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
            P+N+LLDD+MVAH+ DFGIA+LL  E +SM QT+TL TIGYMAP EYG +G VST GDV+
Sbjct: 1300 PNNILLDDDMVAHVGDFGIARLLT-ETESMQQTKTLGTIGYMAP-EYGSDGIVSTKGDVF 1357

Query: 61   SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
            S+GIMLME F RKKP DEMF+G++TLK W+  L   S++EVVDANLL RED  FA K  C
Sbjct: 1358 SYGIMLMEVFARKKPMDEMFNGDLTLKSWVESLAD-SMIEVVDANLLRREDEDFATKLSC 1416

Query: 121  VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLF 157
            +S +  LA+ CT +SPE RI+ K++V  L KI+  L 
Sbjct: 1417 LSSIMALALACTTDSPEERIDMKDVVVGLKKIKIELL 1453

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302143440|emb|CBI22001.3| unnamed protein product [Vitis vinifera]

 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 95/157 (60%), Positives = 119/157 (75%), Gaps = 3/157 (1%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P+N+LLDD+MVAH+ DFGIA+LL  E +SM QT+TL TIGYMAP EYG +G VST GDV+
Sbjct: 775 PNNILLDDDMVAHVGDFGIARLLT-ETESMQQTKTLGTIGYMAP-EYGSDGIVSTKGDVF 832

Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           S+GIMLME F RKKP DEMF+G++TLK W+  L   S++EVVDANLL RED  FA K  C
Sbjct: 833 SYGIMLMEVFARKKPMDEMFNGDLTLKSWVESLAD-SMIEVVDANLLRREDEDFATKLSC 891

Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLF 157
           +S +  LA+ CT +SPE RI+ K++V  L KI+  L 
Sbjct: 892 LSSIMALALACTTDSPEERIDMKDVVVGLKKIKIELL 928

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740824|emb|CBI31006.3| unnamed protein product [Vitis vinifera]

 Score =  191 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 94/157 (59%), Positives = 118/157 (75%), Gaps = 2/157 (1%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P+NVLLDD+MVAH++DFGI KLL  + +SM QT+TL TIGYMAP E+G +G VST  DVY
Sbjct: 570 PNNVLLDDDMVAHVADFGITKLLT-KTESMQQTKTLGTIGYMAPAEHGSDGIVSTKSDVY 628

Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           S+GI+LME F+RKKP DEMF+G++TLK W+   LS SV++VVDANLL RED   A K  C
Sbjct: 629 SYGILLMEVFSRKKPMDEMFTGDLTLKTWVES-LSNSVIQVVDANLLRREDEDLATKLSC 687

Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLF 157
           +S +  LA+ CT +SPE R+N K+ V EL K R  L 
Sbjct: 688 LSSIMALALACTTDSPEERLNMKDAVVELKKSRMKLL 724

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740829|emb|CBI31011.3| unnamed protein product [Vitis vinifera]

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 96/157 (61%), Positives = 117/157 (74%), Gaps = 3/157 (1%)

Query: 1    PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
            PSNVLLDD+MVAH++DFGIAKLL  E +SM QT+TL+TIGYMAP E+G  G VST  DVY
Sbjct: 1738 PSNVLLDDDMVAHVADFGIAKLLT-ETESMQQTKTLSTIGYMAP-EHGSAGIVSTKSDVY 1795

Query: 61   SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
            S+GI+LME F RKKP DEMF+G++TLK W+   LS SV++VVD NLL RED   A K  C
Sbjct: 1796 SYGILLMEVFARKKPMDEMFTGDLTLKTWVES-LSNSVIQVVDVNLLRREDEDLATKLSC 1854

Query: 121  VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLF 157
            +S +  LA+ CT +SPE RI+ K+ V EL K R  L 
Sbjct: 1855 LSSIMALALACTTDSPEERIDMKDAVVELKKSRIKLL 1891

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147855067|emb|CAN82376.1| hypothetical protein VITISV_024048 [Vitis vinifera]

 Score =  190 bits (482), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 92/157 (58%), Positives = 117/157 (74%), Gaps = 3/157 (1%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           PSNVLLDDNMVAH+SDFGIAKLL+G    M +T+TL TIGYMAP EYG EG VST GD+Y
Sbjct: 469 PSNVLLDDNMVAHISDFGIAKLLMG-SVFMKRTKTLGTIGYMAP-EYGSEGIVSTKGDIY 526

Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           S+GIMLME F RKKPTDEMF  E+TLK W+    + ++MEV+D +LL  ED   + +  C
Sbjct: 527 SYGIMLMETFVRKKPTDEMFMEELTLKSWVESSAN-NIMEVIDVDLLIEEDEKISLRPAC 585

Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLF 157
            S +  LA++CT+E PE+RIN K++V  L KI + ++
Sbjct: 586 FSSIITLALDCTVEPPEKRINMKDVVVRLKKILNQIY 622

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147843440|emb|CAN79970.1| hypothetical protein VITISV_043680 [Vitis vinifera]

 Score =  189 bits (481), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 93/156 (59%), Positives = 118/156 (75%), Gaps = 3/156 (1%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           PSN+LLDD+MVAH+SDFGIAKLL+G ++ M +T+TL TIGYMAP EYG EG VST GD+Y
Sbjct: 691 PSNILLDDDMVAHISDFGIAKLLMG-NEFMKRTKTLGTIGYMAP-EYGSEGIVSTKGDIY 748

Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           S+ IMLME F RKKPTDEMF  E+TLK W+    + ++MEV+D NLL  ED +FA KQ C
Sbjct: 749 SYRIMLMETFVRKKPTDEMFMEELTLKSWVESSTN-NIMEVIDVNLLIEEDENFALKQAC 807

Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
            S +  LA +CT E P++RIN K++V  L KI + +
Sbjct: 808 FSSIRTLASDCTAEPPQKRINMKDVVVRLKKILNQI 843

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	164
TAIR|locus:2079142	1010	AT3G47570 [Arabidopsis thalian	0.957	0.155	0.423	2.2e-28
TAIR|locus:2079157	1011	AT3G47580 [Arabidopsis thalian	0.957	0.155	0.411	1.1e-26
TAIR|locus:2075631	1009	AT3G47090 [Arabidopsis thalian	0.957	0.155	0.392	2.4e-26
TAIR|locus:2075661	1025	AT3G47110 [Arabidopsis thalian	0.957	0.153	0.403	2.8e-25
TAIR|locus:2175703	502	AT5G39390 [Arabidopsis thalian	0.884	0.288	0.395	2.5e-21
TAIR|locus:2149922	1031	EFR "EF-TU receptor" [Arabidop	0.884	0.140	0.395	4.2e-21
UNIPROTKB|Q40640	1025	Xa21 "Receptor kinase-like pro	0.932	0.149	0.357	6.8e-21
TAIR|locus:2203000	355	AT1G78530 [Arabidopsis thalian	0.896	0.414	0.385	5.3e-19
TAIR|locus:2156349	1252	GSO2 "GASSHO 2" [Arabidopsis t	0.981	0.128	0.333	1.2e-18
TAIR|locus:2045228	641	SOBIR1 "SUPPRESSOR OF BIR1 1"	0.890	0.227	0.352	1.5e-18

TAIR|locus:2079142 AT3G47570 [Arabidopsis thaliana (taxid:3702)]

 Score = 328 (120.5 bits), Expect = 2.2e-28, P = 2.2e-28
 Identities = 69/163 (42%), Positives = 100/163 (61%)

Query:     1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS-----MTQTQTLATIGYMAPVEYGREGRVST 55
             PSNVLLDD++ AH+SDFG+A+LL+  D+      ++      TIGY AP EYG  G+ S 
Sbjct:   842 PSNVLLDDDLTAHVSDFGLARLLLKFDEESFFNQLSSAGVRGTIGYAAP-EYGVGGQPSI 900

Query:    56 NGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA 115
             NGDVYSFGI+L+E FT K+PT+E+F G  TL  +    L   ++++VD ++L    R   
Sbjct:   901 NGDVYSFGILLLEMFTGKRPTNELFGGNFTLNSYTKSALPERILDIVDESILHIGLRVGF 960

Query:   116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFR 158
                +C++ VF + + C  ESP  R+    +V EL  IR+  F+
Sbjct:   961 PVVECLTMVFEVGLRCCEESPMNRLATSIVVKELISIRERFFK 1003

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2079157 AT3G47580 [Arabidopsis thaliana (taxid:3702)]

 Score = 312 (114.9 bits), Expect = 1.1e-26, P = 1.1e-26
 Identities = 67/163 (41%), Positives = 97/163 (59%)

Query:     1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS--MTQTQTLA---TIGYMAPVEYGREGRVST 55
             PSNVLL+D++ AH+SDFG+A+LL+  D+   + Q  +     TIGY AP EYG  G+ S 
Sbjct:   843 PSNVLLEDDLTAHVSDFGLARLLLKFDKESFLNQLSSAGVRGTIGYAAP-EYGMGGQPSI 901

Query:    56 NGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA 115
             +GDVYSFG++L+E FT K+PTDE+F G +TL  +    L   V E+ D  +L    R   
Sbjct:   902 HGDVYSFGVLLLEMFTGKRPTDELFGGNLTLHSYTKLALPEKVFEIADKAILHIGLRVGF 961

Query:   116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFR 158
                +C++ V  + + C  E P  R+   E+  EL  IR+  F+
Sbjct:   962 RTAECLTLVLEVGLRCCEEYPTNRLATSEVAKELISIRERFFK 1004

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2075631 AT3G47090 [Arabidopsis thaliana (taxid:3702)]

 Score = 309 (113.8 bits), Expect = 2.4e-26, P = 2.4e-26
 Identities = 64/163 (39%), Positives = 97/163 (59%)

Query:     1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS-----MTQTQTLATIGYMAPVEYGREGRVST 55
             PSN+LLDD++ AH+SDFG+A+LL+  DQ      ++      TIGY AP EYG  G+ S 
Sbjct:   841 PSNILLDDDLTAHVSDFGLARLLLKFDQESFFNQLSSAGVRGTIGYAAP-EYGMGGQPSI 899

Query:    56 NGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA 115
             +GDVYSFG++++E FT K+PT+E+F G  TL  +    L   V+++ D ++L    R   
Sbjct:   900 HGDVYSFGVLVLEMFTGKRPTNELFGGNFTLNSYTKAALPERVLDIADKSILHSGLRVGF 959

Query:   116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFR 158
                +C+  + ++ + C  ESP  R+   E   EL  IR+  F+
Sbjct:   960 PVLECLKGILDVGLRCCEESPLNRLATSEAAKELISIRERFFK 1002

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

TAIR|locus:2075661 AT3G47110 [Arabidopsis thaliana (taxid:3702)]

 Score = 299 (110.3 bits), Expect = 2.8e-25, P = 2.8e-25
 Identities = 67/166 (40%), Positives = 100/166 (60%)

Query:     1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-----TLATIGYMAPVEYGREGRVST 55
             PSN+LLD ++ AH+SDFG+A+LL+  D+     Q        TIGY AP EYG  G  S 
Sbjct:   859 PSNILLDKDLTAHVSDFGLAQLLLKFDRDTFHIQFSSAGVRGTIGYAAP-EYGMGGHPSI 917

Query:    56 NGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSV-SVMEVVDANLLTRE-DRH 113
              GDVYSFGI+L+E FT K+PT+++F   +TL  +    L     +++ D  +L     +H
Sbjct:   918 MGDVYSFGIVLLEIFTGKRPTNKLFVDGLTLHSFTKSALQKRQALDITDETILRGAYAQH 977

Query:   114 FAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRN 159
             F   + C++ VF + + C+ ESP  RI+  E +++L  IR+S FR+
Sbjct:   978 FNMVE-CLTLVFRVGVSCSEESPVNRISMAEAISKLVSIRESFFRD 1022

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2175703 AT5G39390 [Arabidopsis thaliana (taxid:3702)]

 Score = 256 (95.2 bits), Expect = 2.5e-21, P = 2.5e-21
 Identities = 64/162 (39%), Positives = 85/162 (52%)

Query:     1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-----TLATIGYMAPVEYGREGRVST 55
             PSNVLLDD++ AH+SDFG+A+LL   D+     Q        TIGY AP EYG   + S 
Sbjct:   349 PSNVLLDDDLTAHVSDFGLARLLYNFDEKTFLNQFSSAGVRGTIGYAAP-EYGMGSKPSI 407

Query:    56 NGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA 115
              GDVYSFG++L+E FT KKPTD  F G   L  +   +LS S          +R  R   
Sbjct:   408 QGDVYSFGVLLLEMFTGKKPTDNSFGGGYNLHGYTKSVLSCST---------SRGGRTMV 458

Query:   116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLF 157
                + +  V  + ++C+ E P  R+   E V EL  I+   F
Sbjct:   459 --DEWLRLVLEVGIKCSEEYPRDRMGMAEAVRELVSIKSKFF 498

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2149922 EFR "EF-TU receptor" [Arabidopsis thaliana (taxid:3702)]

 Score = 260 (96.6 bits), Expect = 4.2e-21, P = 4.2e-21
 Identities = 64/162 (39%), Positives = 88/162 (54%)

Query:     1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-----TLATIGYMAPVEYGREGRVST 55
             PSN+LLDD++ AH+SDFG+A+LL   D+     Q        TIGY AP EYG  G+ S 
Sbjct:   852 PSNILLDDDLTAHVSDFGLAQLLYKYDRESFLNQFSSAGVRGTIGYAAP-EYGMGGQPSI 910

Query:    56 NGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA 115
              GDVYSFGI+L+E F+ KKPTDE F+G+  L  +   +LS        +N +        
Sbjct:   911 QGDVYSFGILLLEMFSGKKPTDESFAGDYNLHSYTKSILS-GCTSSGGSNAI-------- 961

Query:   116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLF 157
                + +  V  + ++C+ E P  R+   E V EL  IR   F
Sbjct:   962 --DEGLRLVLQVGIKCSEEYPRDRMRTDEAVRELISIRSKFF 1001

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0010204 "defense response signaling pathway, resistance gene-independent" evidence=IMP

GO:0016045 "detection of bacterium" evidence=RCA;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0002764 "immune response-regulating signaling pathway" evidence=IMP

GO:0009626 "plant-type hypersensitive response" evidence=IMP

GO:0019199 "transmembrane receptor protein kinase activity" evidence=TAS

GO:0010359 "regulation of anion channel activity" evidence=IMP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009581 "detection of external stimulus" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0050776 "regulation of immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

UNIPROTKB|Q40640 Xa21 "Receptor kinase-like protein" [Oryza sativa (taxid:4530)]

 Score = 258 (95.9 bits), Expect = 6.8e-21, P = 6.8e-21
 Identities = 60/168 (35%), Positives = 97/168 (57%)

Query:     2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQT-----LATIGYMAPVEYGREGRVSTN 56
             SNVLLD +MVAH+ DFG+A++L+ +  S+ Q  T     + TIGY AP EYG     ST+
Sbjct:   846 SNVLLDSDMVAHVGDFGLARILV-DGTSLIQQSTSSMGFIGTIGYAAP-EYGVGLIASTH 903

Query:    57 GDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAA 116
             GD+YS+GI+++E  T K+PTD  F  ++ L++++   L   V +VVD  L+   +    +
Sbjct:   904 GDIYSYGILVLEIVTGKRPTDSTFRPDLGLRQYVELGLHGRVTDVVDTKLILDSENWLNS 963

Query:   117 KQ--------QCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
                       +C+ ++  L + C+ E P  R    +I+ EL+ I+ +L
Sbjct:   964 TNNSPCRRITECIVWLLRLGLSCSQELPSSRTPTGDIIDELNAIKQNL 1011

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2203000 AT1G78530 [Arabidopsis thaliana (taxid:3702)]

 Score = 229 (85.7 bits), Expect = 5.3e-19, P = 5.3e-19
 Identities = 59/153 (38%), Positives = 83/153 (54%)

Query:     2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
             SN+LLD NM A +SDFG+A L+   D++   T    T GY+AP EY   G+ +  GDVYS
Sbjct:   201 SNILLDHNMEARVSDFGLATLM-EPDKTHVSTFVAGTFGYLAP-EYFDTGKATMKGDVYS 258

Query:    62 FGIMLMEAFTRKKPTDEMFSGEMT-LKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
             FG++L+E  T +KPTD+ F  E T L  W+  ++     EVV  N L         + + 
Sbjct:   259 FGVVLLELLTGRKPTDDEFFEEGTKLVTWVKGVVRDQREEVVIDNRLRGSS---VQENEE 315

Query:   121 VSFVFNLAMECTIESPERRINAKEIVTELSKIR 153
             ++ VF +AM C    P  R    E+V  L  I+
Sbjct:   316 MNDVFGIAMMCLEPEPAIRPAMTEVVKLLEYIK 348

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2156349 GSO2 "GASSHO 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 238 (88.8 bits), Expect = 1.2e-18, P = 1.2e-18
 Identities = 56/168 (33%), Positives = 90/168 (53%)

Query:     2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL--ATIGYMAPVEYGREGRVSTNGDV 59
             SNVLLD N+ AHL DFG+AK+L G   + T++ T+   + GY+AP EY    + +   DV
Sbjct:  1083 SNVLLDSNIEAHLGDFGLAKILTGNYDTNTESNTMFAGSYGYIAP-EYAYSLKATEKSDV 1141

Query:    60 YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQ 119
             YS GI+LME  T K PT+ MF  E  + RW+  +L           L+  E +     ++
Sbjct:  1142 YSMGIVLMEIVTGKMPTEAMFDEETDMVRWVETVLDTPPGSEAREKLIDSELKSLLPCEE 1201

Query:   120 CVSF-VFNLAMECTIESPERRINAKEIVTELSKI---RDSLFRNVGAD 163
               ++ V  +A++CT   P+ R ++++    L  +   R + +R +  D
Sbjct:  1202 EAAYQVLEIALQCTKSYPQERPSSRQASEYLLNVFNNRAASYREMQTD 1249

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009553 "embryo sac development" evidence=IMP

GO:0008544 "epidermis development" evidence=IGI

GO:0009790 "embryo development" evidence=IGI

TAIR|locus:2045228 SOBIR1 "SUPPRESSOR OF BIR1 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 233 (87.1 bits), Expect = 1.5e-18, P = 1.5e-18
 Identities = 55/156 (35%), Positives = 95/156 (60%)

Query:     1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
             P+NVLLDD+M A +SDFG+AK +      +T +    T+GY+AP E+ +  + +   D+Y
Sbjct:   492 PANVLLDDDMEARISDFGLAKAMPDAVTHITTSHVAGTVGYIAP-EFYQTHKFTDKCDIY 550

Query:    61 SFGIMLMEAFTRKKPTDEMF--SGEMTLKRWINDLL-SVSVMEVVDANLLTREDRHFAAK 117
             SFG++L      K P+DE F  + EM+L +W+ +++ S +    +D  L+   D+ F   
Sbjct:   551 SFGVILGILVIGKLPSDEFFQHTDEMSLIKWMRNIITSENPSLAIDPKLM---DQGF--D 605

Query:   118 QQCVSFVFNLAMECTIESPERRINAKEIVTELSKIR 153
             +Q +  V  +A  CT++ P++R N+K++ T LS+I+
Sbjct:   606 EQML-LVLKIACYCTLDDPKQRPNSKDVRTMLSQIK 640

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS;IDA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0010942 "positive regulation of cell death" evidence=IMP

GO:0031349 "positive regulation of defense response" evidence=IMP

GO:0004713 "protein tyrosine kinase activity" evidence=IDA

GO:0060862 "negative regulation of floral organ abscission" evidence=IGI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	164
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	9e-16
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	4e-15
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	5e-14
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	8e-14
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-13
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	4e-12
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	1e-11
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	5e-11
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	1e-10
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	1e-10
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	4e-10
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	5e-10
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	2e-09
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	3e-09
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	5e-09
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	7e-09
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	1e-08
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	1e-08
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	2e-08
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	7e-08
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	8e-08
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	8e-08
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	1e-07
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	2e-07
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	2e-07
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	3e-07
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	3e-07
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	5e-07
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	5e-07
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	7e-07
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	7e-07
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	1e-06
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	1e-06
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	1e-06
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	1e-06
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	1e-06
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	1e-06
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	1e-06
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	2e-06
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	2e-06
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	2e-06
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	3e-06
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	4e-06
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	4e-06
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	4e-06
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	4e-06
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	6e-06
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	6e-06
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	7e-06
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	8e-06
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	8e-06
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	1e-05
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	1e-05
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	1e-05
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	1e-05
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	1e-05
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	1e-05
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	1e-05
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	2e-05
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	2e-05
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	2e-05
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	2e-05
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	2e-05
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	2e-05
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	2e-05
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	3e-05
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	3e-05
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	4e-05
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	4e-05
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	5e-05
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	7e-05
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	7e-05
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	7e-05
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	1e-04
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	1e-04
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	1e-04
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	1e-04
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	1e-04
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	2e-04
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	2e-04
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	2e-04
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	2e-04
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	2e-04
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	2e-04
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	2e-04
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	3e-04
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	3e-04
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	3e-04
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	3e-04
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	3e-04
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	3e-04
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	3e-04
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	3e-04
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	4e-04
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	4e-04
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	5e-04
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	5e-04
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	5e-04
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	5e-04
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	5e-04
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	6e-04
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	6e-04
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	7e-04
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	7e-04
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	7e-04
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	8e-04
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	8e-04
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	8e-04
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	0.001
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	0.001
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	0.001
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	0.001
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	0.001
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	0.001
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	0.001
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	0.001
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	0.001
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	0.001
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	0.002
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	0.002
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	0.002
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	0.003
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	0.003
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	0.003
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	0.003
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	0.004
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	0.004
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	0.004
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	0.004

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 71.8 bits (177), Expect = 9e-16
 Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 20/147 (13%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N L+ +N+V  +SDFG+++ +  +D    +      I +MAP E  ++G+ ++  DV+SF
Sbjct: 132 NCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKLPIKWMAP-ESLKDGKFTSKSDVWSF 190

Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
           G++L E FT          GE       N        EV++   L  +       + C  
Sbjct: 191 GVLLWEIFTL---------GEQPYPGMSN-------EEVLE---LLEDGYRLPRPENCPD 231

Query: 123 FVFNLAMECTIESPERRINAKEIVTEL 149
            ++ L ++C    PE R    E+V +L
Sbjct: 232 ELYELMLQCWAYDPEDRPTFSELVEDL 258

Length = 258

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 70.0 bits (172), Expect = 4e-15
 Identities = 42/146 (28%), Positives = 64/146 (43%), Gaps = 16/146 (10%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P N+LLD+N V  ++DFG+AK L+    S+T T    T  YMAP             DV+
Sbjct: 126 PENILLDENGVVKIADFGLAKKLLKSSSSLT-TFV-GTPWYMAPEVLLGGNGYGPKVDVW 183

Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           S G++L E  T K P    FSGE            +  ++++   L    +         
Sbjct: 184 SLGVILYELLTGKPP----FSGE----------NILDQLQLIRRILGPPLEFDEPKWSSG 229

Query: 121 VSFVFNLAMECTIESPERRINAKEIV 146
                +L  +C  + P +R  A+EI+
Sbjct: 230 SEEAKDLIKKCLNKDPSKRPTAEEIL 255

Length = 260

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 66.8 bits (164), Expect = 5e-14
 Identities = 36/145 (24%), Positives = 59/145 (40%), Gaps = 21/145 (14%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P N+LLD++    L+DFG+A+ L   ++  T   T     YMAP E           D++
Sbjct: 125 PENILLDEDGHVKLADFGLARQLDPGEKLTTFVGTPE---YMAP-EVLLGKGYGKAVDIW 180

Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           S G++L E  T K P    F G+  L      +             ++ E +     ++ 
Sbjct: 181 SLGVILYELLTGKPP----FPGDDQLLELFKKIGKPKPPFPPPEWDISPEAKDLI--RKL 234

Query: 121 VSFVFNLAMECTIESPERRINAKEI 145
              V +         PE+R+ A+E 
Sbjct: 235 --LVKD---------PEKRLTAEEA 248

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 66.4 bits (163), Expect = 8e-14
 Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 22/148 (14%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N L+ +++V  +SDFG+++ +  +D    +T     I +MAP E  ++G  ++  DV+SF
Sbjct: 135 NCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAP-ESLKDGIFTSKSDVWSF 193

Query: 63  GIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G++L E FT    P    + G             +S  EV++     R+       + C 
Sbjct: 194 GVLLWEIFTLGATP----YPG-------------LSNEEVLEY---LRKGYRLPKPEYCP 233

Query: 122 SFVFNLAMECTIESPERRINAKEIVTEL 149
             ++ L + C    PE R    E+V  L
Sbjct: 234 DELYELMLSCWQLDPEDRPTFSELVERL 261

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 65.2 bits (160), Expect = 2e-13
 Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 25/149 (16%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N L+ +N+V  +SDFG+++  + +D    +      I +MAP E  +EG+ ++  DV+SF
Sbjct: 132 NCLVGENLVVKISDFGLSRD-LYDDDYYRKRGGKLPIRWMAP-ESLKEGKFTSKSDVWSF 189

Query: 63  GIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDA-NLLTREDRHFAAKQQC 120
           G++L E FT  ++P        M+ +          V+E +     L +          C
Sbjct: 190 GVLLWEIFTLGEQP-----YPGMSNEE---------VLEYLKNGYRLPQPPN-------C 228

Query: 121 VSFVFNLAMECTIESPERRINAKEIVTEL 149
              +++L ++C  E PE R    E+V  L
Sbjct: 229 PPELYDLMLQCWAEDPEDRPTFSELVEIL 257

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 61.8 bits (151), Expect = 4e-12
 Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 25/149 (16%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N L+ +N+V  +SDFG+++  + +D           I +MAP E  +EG+ ++  DV+SF
Sbjct: 133 NCLVGENLVVKISDFGLSRD-LYDDDYYKVKGGKLPIRWMAP-ESLKEGKFTSKSDVWSF 190

Query: 63  GIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDA-NLLTREDRHFAAKQQC 120
           G++L E FT  ++P        M+            V+E +     L +          C
Sbjct: 191 GVLLWEIFTLGEEP-----YPGMSNAE---------VLEYLKKGYRLPKPPN-------C 229

Query: 121 VSFVFNLAMECTIESPERRINAKEIVTEL 149
              ++ L ++C  E PE R    E+V  L
Sbjct: 230 PPELYKLMLQCWAEDPEDRPTFSELVEIL 258

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 61.3 bits (147), Expect = 1e-11
 Identities = 38/153 (24%), Positives = 63/153 (41%), Gaps = 15/153 (9%)

Query: 1   PSNVLLD-DNMVAHLSDFGIAKLLIGEDQSMTQTQTLA----TIGYMAP--VEYGREGRV 53
           P N+LLD D  V  L DFG+AKLL     + +     +    T GYMAP  +        
Sbjct: 129 PENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYA 188

Query: 54  STNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRH 113
           S++ D++S GI L E  T   P    F GE   K       ++ ++  +    L      
Sbjct: 189 SSSSDIWSLGITLYELLTGLPP----FEGE---KNSSATSQTLKIILELPTPSLASPLSP 241

Query: 114 FAAKQQCVSFVFNLAMECTIESPERRINAKEIV 146
            +  +       +L  +   + P+ R+++   +
Sbjct: 242 -SNPELISKAASDLLKKLLAKDPKNRLSSSSDL 273

Length = 384

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 59.0 bits (143), Expect = 5e-11
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 25/150 (16%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+ +++VA +SDFG+AK     + S  Q      + + AP E  RE + ST  DV+SF
Sbjct: 132 NVLVSEDLVAKVSDFGLAK-----EASQGQDSGKLPVKWTAP-EALREKKFSTKSDVWSF 185

Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
           GI+L E ++          G +   R       + + +VV       +     A + C  
Sbjct: 186 GILLWEIYS---------FGRVPYPR-------IPLKDVVPH---VEKGYRMEAPEGCPP 226

Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKI 152
            V+ +  +C    P +R   K++  +L+ I
Sbjct: 227 EVYKVMKDCWELDPAKRPTFKQLREQLALI 256

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 57.8 bits (140), Expect = 1e-10
 Identities = 41/151 (27%), Positives = 67/151 (44%), Gaps = 24/151 (15%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N+L+ +++V  ++DFG+A+L+  ++     +       + AP E    G  ST  DV+SF
Sbjct: 134 NILVGEDLVCKVADFGLARLI--KEDVYLSSDKKIPYKWTAP-EAASHGTFSTKSDVWSF 190

Query: 63  GIMLMEAFTRKK-PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           GI+L E FT  + P   M                 +  EV D   +T   R      +C 
Sbjct: 191 GILLYEMFTYGQVPYPGM-----------------NNHEVYD--QITAGYR-MPCPAKCP 230

Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
             ++ + +EC    PE R + K +  EL  I
Sbjct: 231 QEIYKIMLECWAAEPEDRPSFKALREELDNI 261

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 56.9 bits (138), Expect = 1e-10
 Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 3/69 (4%)

Query: 1   PSNVLLD-DNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
           P N+LLD DN    L+DFG++KLL            + T  YMAP     +G  S   D+
Sbjct: 120 PENILLDSDNGKVKLADFGLSKLL--TSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDI 177

Query: 60  YSFGIMLME 68
           +S G++L E
Sbjct: 178 WSLGVILYE 186

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 56.1 bits (136), Expect = 4e-10
 Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 5/76 (6%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQT-LATIGYMAPVEYGREGRVSTNGDV 59
           PSN+L++      ++DFGI+K+L   + ++ Q  T + T+ YM+P E  +    S   D+
Sbjct: 128 PSNLLINSKGEVKIADFGISKVL---ENTLDQCNTFVGTVTYMSP-ERIQGESYSYAADI 183

Query: 60  YSFGIMLMEAFTRKKP 75
           +S G+ L+E    K P
Sbjct: 184 WSLGLTLLECALGKFP 199

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 56.2 bits (135), Expect = 5e-10
 Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 20/147 (13%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N+L+ + +   +SD G+++ +   D    Q ++L  I +M P E    G+ S++ D++SF
Sbjct: 154 NILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPP-EAIMYGKFSSDSDIWSF 212

Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
           G++L E F+        FS +              V+E+V      R+ +     + C  
Sbjct: 213 GVVLWEIFSFGLQPYYGFSNQ-------------EVIEMV------RKRQLLPCSEDCPP 253

Query: 123 FVFNLAMECTIESPERRINAKEIVTEL 149
            +++L  EC  E P RR   K+I T L
Sbjct: 254 RMYSLMTECWQEGPSRRPRFKDIHTRL 280

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 54.8 bits (132), Expect = 2e-09
 Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 20/147 (13%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N L+ + +   +SDFG+++ +   D    Q+++L  + +M P E    G+ +T  D++SF
Sbjct: 154 NCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPP-EAILYGKFTTESDIWSF 212

Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
           G++L E F+        FS +              V+E++      R  +     + C +
Sbjct: 213 GVVLWEIFSYGLQPYYGFSNQ-------------EVIEMI------RSRQLLPCPEDCPA 253

Query: 123 FVFNLAMECTIESPERRINAKEIVTEL 149
            V+ L +EC  E P RR   K+I T L
Sbjct: 254 RVYALMIECWNEIPARRPRFKDIHTRL 280

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 53.9 bits (130), Expect = 3e-09
 Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 23/138 (16%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N+L+ +N+V  ++DFG+A+L I +D+   +      I + AP E    GR +   DV+SF
Sbjct: 133 NILVGENLVCKIADFGLARL-IEDDEYTAREGAKFPIKWTAP-EAANYGRFTIKSDVWSF 190

Query: 63  GIMLMEAFTRKK-PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           GI+L E  T  + P   M + E              V+E V+                C 
Sbjct: 191 GILLTEIVTYGRVPYPGMTNRE--------------VLEQVERGY------RMPRPPNCP 230

Query: 122 SFVFNLAMECTIESPERR 139
             +++L ++C  + PE R
Sbjct: 231 EELYDLMLQCWDKDPEER 248

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 53.6 bits (129), Expect = 5e-09
 Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 26/152 (17%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP--VEYGREGRVSTNGDVY 60
           N L+  ++V  + DFG+++ +   D       T+  I +M P  + Y +    +T  DV+
Sbjct: 152 NCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRK---FTTESDVW 208

Query: 61  SFGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQ 119
           SFG++L E FT  K+P   + + E              V+E +    L +  R       
Sbjct: 209 SFGVVLWEIFTYGKQPWYGLSNEE--------------VIECITQGRLLQRPR------T 248

Query: 120 CVSFVFNLAMECTIESPERRINAKEIVTELSK 151
           C S V+++ + C    P++RIN K+I   L K
Sbjct: 249 CPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 52.5 bits (127), Expect = 7e-09
 Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 10/86 (11%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDV 59
           P N+LLD +    L+DFG+AK L  E     +T T   T  Y+AP E           D 
Sbjct: 121 PENILLDADGHIKLTDFGLAKELSSEGS---RTNTFCGTPEYLAP-EVLLGKGYGKAVDW 176

Query: 60  YSFGIMLMEAFTRKKP-----TDEMF 80
           +S G++L E  T K P       E++
Sbjct: 177 WSLGVLLYEMLTGKPPFYAEDRKEIY 202

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 51.7 bits (125), Expect = 1e-08
 Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 7/83 (8%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P N+ L  N +  L DFGI+K+L      + +T  + T  Y++P E  +    +   D++
Sbjct: 131 PQNIFLTSNGLVKLGDFGISKVLS-STVDLAKTV-VGTPYYLSP-ELCQNKPYNYKSDIW 187

Query: 61  SFGIMLMEAFTRKKPTDEMFSGE 83
           S G +L E  T K P    F GE
Sbjct: 188 SLGCVLYELCTLKHP----FEGE 206

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 51.8 bits (125), Expect = 1e-08
 Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 3/76 (3%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDV 59
            +N+L+D + V  L+DFG AK  +G+ ++   T ++  T  +MAP E  R        D+
Sbjct: 129 GANILVDSDGVVKLADFGCAK-RLGDIETGEGTGSVRGTPYWMAP-EVIRGEEYGRAADI 186

Query: 60  YSFGIMLMEAFTRKKP 75
           +S G  ++E  T K P
Sbjct: 187 WSLGCTVIEMATGKPP 202

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 51.6 bits (124), Expect = 2e-08
 Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 7/152 (4%)

Query: 3   NVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           N+L++   +  +SDFG+AK+L   +D    +    + I + AP E  R  + S+  DV+S
Sbjct: 139 NILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAP-ECLRTSKFSSASDVWS 197

Query: 62  FGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           FG+ L E FT   P+    +  + +       + V+ +      LL   +R       C 
Sbjct: 198 FGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRL----LELLKEGER-LPRPPSCP 252

Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKIR 153
             V++L   C    P+ R +  +++  + ++R
Sbjct: 253 DEVYDLMKLCWEAEPQDRPSFADLILIVDRLR 284

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 50.0 bits (119), Expect = 7e-08
 Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 20/143 (13%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N L+  N++  + DFG+++ +   D       T+  I +M P E     + +T  DV+SF
Sbjct: 153 NCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPP-ESIMYRKFTTESDVWSF 211

Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
           G++L E FT  K            + W   L +  V+E +       + R     + C  
Sbjct: 212 GVILWEIFTYGK------------QPWFQ-LSNTEVIECIT------QGRVLERPRVCPK 252

Query: 123 FVFNLAMECTIESPERRINAKEI 145
            V+++ + C    P++R+N KEI
Sbjct: 253 EVYDIMLGCWQREPQQRLNIKEI 275

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 50.1 bits (120), Expect = 8e-08
 Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 17/86 (19%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNG--- 57
           PSN+LLD N    L DFGI+  L+    S+ +T+      YMAP       R+  +    
Sbjct: 136 PSNILLDRNGNIKLCDFGISGQLV---DSIAKTRDAGCRPYMAP------ERIDPSARDG 186

Query: 58  -----DVYSFGIMLMEAFTRKKPTDE 78
                DV+S GI L E  T K P  +
Sbjct: 187 YDVRSDVWSLGITLYEVATGKFPYPK 212

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 49.7 bits (118), Expect = 8e-08
 Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 4/74 (5%)

Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
           +N+L+ +N+V  ++DFG+A+L+  ED   T  Q     I + AP E    GR +   DV+
Sbjct: 131 ANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 187

Query: 61  SFGIMLMEAFTRKK 74
           SFGI+L E  T+ +
Sbjct: 188 SFGILLTELTTKGR 201

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 49.7 bits (118), Expect = 1e-07
 Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 4/74 (5%)

Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
           +N+L+ DN+V  ++DFG+A+L+  ED   T  Q     I + AP E    GR +   DV+
Sbjct: 131 ANILVGDNLVCKIADFGLARLI--EDNEYTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 187

Query: 61  SFGIMLMEAFTRKK 74
           SFGI+L E  T+ +
Sbjct: 188 SFGILLTELVTKGR 201

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 48.9 bits (117), Expect = 2e-07
 Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 4/75 (5%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P N+LLD+    H++DF IA  +     ++T T T  T GYMAP    R+G  S   D +
Sbjct: 128 PDNILLDEQGHVHITDFNIATKV--TPDTLT-TSTSGTPGYMAPEVLCRQGY-SVAVDWW 183

Query: 61  SFGIMLMEAFTRKKP 75
           S G+   E    K+P
Sbjct: 184 SLGVTAYECLRGKRP 198

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 48.5 bits (115), Expect = 2e-07
 Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 4/74 (5%)

Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
           +N+L+ D +V  ++DFG+A+L+  ED   T  Q     I + AP E    GR +   DV+
Sbjct: 131 ANILVGDGLVCKIADFGLARLI--EDNEYTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 187

Query: 61  SFGIMLMEAFTRKK 74
           SFGI+L E  T+ +
Sbjct: 188 SFGILLTELVTKGR 201

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 48.4 bits (115), Expect = 3e-07
 Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 6/69 (8%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+ ++ VA +SDFG+ K     + S TQ      + + AP E  RE + ST  DV+SF
Sbjct: 132 NVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAP-EALREKKFSTKSDVWSF 185

Query: 63  GIMLMEAFT 71
           GI+L E ++
Sbjct: 186 GILLWEIYS 194

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 48.1 bits (115), Expect = 3e-07
 Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 6/78 (7%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVST---NG 57
           PSN+LLD +    L DFGI+  L+    S  +T++     YMAP                
Sbjct: 143 PSNILLDASGNVKLCDFGISGRLV---DSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRA 199

Query: 58  DVYSFGIMLMEAFTRKKP 75
           DV+S GI L+E  T + P
Sbjct: 200 DVWSLGISLVELATGQFP 217

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 47.6 bits (113), Expect = 5e-07
 Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 7/84 (8%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N+L+ ++ VA +SDFG+A++      SM    +   + + AP E  +  + S+  DV+S+
Sbjct: 130 NILVSEDGVAKVSDFGLARV-----GSMGVDNSKLPVKWTAP-EALKHKKFSSKSDVWSY 183

Query: 63  GIMLMEAFTR-KKPTDEMFSGEMT 85
           G++L E F+  + P  +M   E+ 
Sbjct: 184 GVLLWEVFSYGRAPYPKMSLKEVK 207

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 47.5 bits (113), Expect = 5e-07
 Identities = 35/148 (23%), Positives = 68/148 (45%), Gaps = 21/148 (14%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N L+    V  +SDFG+ + ++ +D+  + +     + +  P E     + S+  DV+SF
Sbjct: 130 NCLVSSTGVVKVSDFGMTRYVL-DDEYTSSSGAKFPVKWSPP-EVFNFSKYSSKSDVWSF 187

Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
           G+++ E FT          G+M  ++  N        EVV+   ++R  R +  K   ++
Sbjct: 188 GVLMWEVFTE---------GKMPFEKKSN-------YEVVEM--ISRGFRLYRPKLASMT 229

Query: 123 FVFNLAMECTIESPERRINAKEIVTELS 150
            V+ +   C  E PE R    E++  ++
Sbjct: 230 -VYEVMYSCWHEKPEGRPTFAELLRAIT 256

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 47.0 bits (112), Expect = 7e-07
 Identities = 38/156 (24%), Positives = 66/156 (42%), Gaps = 32/156 (20%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+ ++ V  ++DFG+A+ +   D     T     + +MAP E   +   +   DV+SF
Sbjct: 162 NVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAP-EALFDRVYTHQSDVWSF 220

Query: 63  GIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAA 116
           G++L E FT         P +E+F                          L +E      
Sbjct: 221 GVLLWEIFTLGGSPYPGIPVEELFK-------------------------LLKEGYRMEK 255

Query: 117 KQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
            Q C   +++L  +C  E P +R   K++V +L ++
Sbjct: 256 PQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRM 291

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 47.0 bits (112), Expect = 7e-07
 Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 2/69 (2%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+ +N +  ++DFG+A++ I ED    +      I + AP E     R S   DV+SF
Sbjct: 133 NVLVGENNICKVADFGLARV-IKEDIYEAREGAKFPIKWTAP-EAALYNRFSIKSDVWSF 190

Query: 63  GIMLMEAFT 71
           GI+L E  T
Sbjct: 191 GILLTEIVT 199

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 46.9 bits (112), Expect = 1e-06
 Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 3/75 (4%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P+N+ LD N    L DFG+AK+L G D S  +T  + T  YM+P E           D++
Sbjct: 138 PANIFLDANNNVKLGDFGLAKIL-GHDSSFAKT-YVGTPYYMSP-EQLNHMSYDEKSDIW 194

Query: 61  SFGIMLMEAFTRKKP 75
           S G ++ E      P
Sbjct: 195 SLGCLIYELCALSPP 209

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 47.2 bits (112), Expect = 1e-06
 Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 19/153 (12%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P  +++D     HL    +  LL       T T+   +  Y+AP E      ++   D+Y
Sbjct: 811 PEKIIIDGKDEPHLR-LSLPGLLC------TDTKCFISSAYVAP-ETRETKDITEKSDIY 862

Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTRED----RHFAA 116
            FG++L+E  T K P D  F    ++  W     S       D +L    D       + 
Sbjct: 863 GFGLILIELLTGKSPADAEFGVHGSIVEWARYCYS-------DCHLDMWIDPSIRGDVSV 915

Query: 117 KQQCVSFVFNLAMECTIESPERRINAKEIVTEL 149
            Q  +  V NLA+ CT   P  R  A +++  L
Sbjct: 916 NQNEIVEVMNLALHCTATDPTARPCANDVLKTL 948

Length = 968

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 46.4 bits (111), Expect = 1e-06
 Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 4/75 (5%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
            +N+LL  +    L DFG++  L       T    + T  +MAP E           D++
Sbjct: 126 AANILLTSDGEVKLIDFGLSAQLSDTKARNT---MVGTPYWMAP-EVINGKPYDYKADIW 181

Query: 61  SFGIMLMEAFTRKKP 75
           S GI  +E    K P
Sbjct: 182 SLGITAIELAEGKPP 196

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 46.6 bits (111), Expect = 1e-06
 Identities = 35/153 (22%), Positives = 59/153 (38%), Gaps = 26/153 (16%)

Query: 3   NVLLDDNMVAHLSDFGIAK-LLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           N+LL  +    + DFG+ + L   ED  + +        + AP E  R    S   DV+ 
Sbjct: 127 NILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAP-ESLRTRTFSHASDVWM 185

Query: 62  FGIMLMEAFTRKKPTDEMFS-GEMTLKRWINDLLSVSVMEVVDANL--LTREDRHFAAKQ 118
           FG+ L           EMF+ GE     W   L    +++ +D     L R +       
Sbjct: 186 FGVTLW----------EMFTYGEEP---WAG-LSGSQILKKIDKEGERLERPE------- 224

Query: 119 QCVSFVFNLAMECTIESPERRINAKEIVTELSK 151
            C   ++N+ ++C   +P  R     +   L +
Sbjct: 225 ACPQDIYNVMLQCWAHNPADRPTFAALREFLPE 257

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 46.5 bits (110), Expect = 1e-06
 Identities = 25/83 (30%), Positives = 47/83 (56%), Gaps = 3/83 (3%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N L+ +N V  +SDFG+ + ++ +DQ  + T T   + + +P E     + S+  DV+SF
Sbjct: 130 NCLVGENQVVKVSDFGMTRFVL-DDQYTSSTGTKFPVKWSSP-EVFSFSKYSSKSDVWSF 187

Query: 63  GIMLMEAFTR-KKPTDEMFSGEM 84
           G+++ E F+  K P +   + E+
Sbjct: 188 GVLMWEVFSEGKTPYENRSNSEV 210

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 46.6 bits (110), Expect = 1e-06
 Identities = 36/147 (24%), Positives = 65/147 (44%), Gaps = 20/147 (13%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+ D +   +SD G+ + +   D       +L  I +M+P E    G+ S + D++S+
Sbjct: 154 NVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSP-EAIMYGKFSIDSDIWSY 212

Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
           G++L E F+                  +      S  +V++   + R  +       C +
Sbjct: 213 GVVLWEVFSYG----------------LQPYCGYSNQDVIE---MIRNRQVLPCPDDCPA 253

Query: 123 FVFNLAMECTIESPERRINAKEIVTEL 149
           +V+ L +EC  E P RR   K+I + L
Sbjct: 254 WVYTLMLECWNEFPSRRPRFKDIHSRL 280

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 46.1 bits (109), Expect = 1e-06
 Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 5/86 (5%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLAT--IGYMAPVEYGREGRVSTNGDVY 60
           NVLL     A +SDFG++K L G D++  + +T     + + AP E     + S+  DV+
Sbjct: 125 NVLLVTQHYAKISDFGLSKAL-GADENYYKAKTHGKWPVKWYAP-ECMNYYKFSSKSDVW 182

Query: 61  SFGIMLMEAFTR-KKPTDEMFSGEMT 85
           SFG+++ EAF+  +KP   M   E+T
Sbjct: 183 SFGVLMWEAFSYGQKPYKGMKGNEVT 208

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 45.8 bits (109), Expect = 2e-06
 Identities = 43/145 (29%), Positives = 62/145 (42%), Gaps = 19/145 (13%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           PSN+L++      L DFG++  L+    S+ +T    T  YMAP E  +    S   D++
Sbjct: 129 PSNILVNSRGQIKLCDFGVSGQLV---NSLAKTFV-GTSSYMAP-ERIQGNDYSVKSDIW 183

Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           S G+ L+E  T + P              I +LL   V E      L      F+   Q 
Sbjct: 184 SLGLSLIELATGRFPYPPENDPPDG----IFELLQYIVNE--PPPRLPSGK--FSPDFQ- 234

Query: 121 VSFVFNLAMECTIESPERRINAKEI 145
             FV NL   C I+ P  R + KE+
Sbjct: 235 -DFV-NL---CLIKDPRERPSYKEL 254

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 45.7 bits (108), Expect = 2e-06
 Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 21/153 (13%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N+LL  + +  ++DFG+A LL  +D+    ++    I +MA +E    GR +   DV+S+
Sbjct: 139 NILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMA-LESILFGRYTHQSDVWSY 197

Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
           G+ + E  +        +  E            +   EV D  LL + +R  A  Q C  
Sbjct: 198 GVTVWEMMS--------YGAE--------PYAGMRPHEVPD--LLEKGER-LAQPQICTI 238

Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKI-RD 154
            V+ + ++C +     R   KE+  E +++ RD
Sbjct: 239 DVYMVMVKCWMIDENVRPTFKELANEFTRMARD 271

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 45.8 bits (109), Expect = 2e-06
 Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 6/84 (7%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSM-TQTQTLA-TIGYMAPVEYGREGRVSTNG- 57
           P+N+ LD N V  L DFG A  L     +M  + Q+LA T  YMAP E    G+   +G 
Sbjct: 127 PANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAP-EVITGGKGKGHGR 185

Query: 58  --DVYSFGIMLMEAFTRKKPTDEM 79
             D++S G +++E  T K+P  E+
Sbjct: 186 AADIWSLGCVVLEMATGKRPWSEL 209

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 45.0 bits (107), Expect = 3e-06
 Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 25/153 (16%)

Query: 3   NVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           NVLL +   A +SDFG+++ L  G D     T     + + AP E    G+ S+  DV+S
Sbjct: 125 NVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAP-ECINYGKFSSKSDVWS 183

Query: 62  FGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANL-LTREDRHFAAKQQ 119
           +G+ L EAF+   KP  EM   E              V+ ++++   L R +        
Sbjct: 184 YGVTLWEAFSYGAKPYGEMKGAE--------------VIAMLESGERLPRPEE------- 222

Query: 120 CVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
           C   ++++ + C    PE R    E+ +   + 
Sbjct: 223 CPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 45.2 bits (107), Expect = 4e-06
 Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P N+LLD+     L+DFG++K  I  D          T+ YMAP    R G  + + D +
Sbjct: 126 PENILLDEEGHIKLTDFGLSKESI--DHEKKAYSFCGTVEYMAPEVVNRRGH-TQSADWW 182

Query: 61  SFGIMLMEAFTRKKP 75
           SFG+++ E  T   P
Sbjct: 183 SFGVLMFEMLTGSLP 197

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 45.1 bits (106), Expect = 4e-06
 Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 22/151 (14%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N L+ +N++  + DFG+++ +   D       T+  I +M P E     + +T  DV+S 
Sbjct: 150 NCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPP-ESIMYRKFTTESDVWSL 208

Query: 63  GIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G++L E FT  K+P  ++ + E              V+E +    + +  R       C 
Sbjct: 209 GVVLWEIFTYGKQPWYQLSNNE--------------VIECITQGRVLQRPR------TCP 248

Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
             V++L + C    P  R+N KEI + L  +
Sbjct: 249 KEVYDLMLGCWQREPHMRLNIKEIHSLLQNL 279

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 45.0 bits (106), Expect = 4e-06
 Identities = 37/153 (24%), Positives = 68/153 (44%), Gaps = 26/153 (16%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+ +     +SDFG+++ +  ED  + +++    + +MA  E   +   +T  DV+SF
Sbjct: 157 NVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAI-ESLFDHIYTTQSDVWSF 215

Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLT---REDRHFAAKQQ 119
           G++L E  T        + G    + +               NLL    R +R     + 
Sbjct: 216 GVLLWEIVTLGGNP---YPGIAPERLF---------------NLLKTGYRMER----PEN 253

Query: 120 CVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
           C   ++NL + C  + P++R    +I  EL K+
Sbjct: 254 CSEEMYNLMLTCWKQEPDKRPTFADISKELEKM 286

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 45.0 bits (106), Expect = 4e-06
 Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 25/153 (16%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIG--YMAPVEYGREGRVSTNGDVY 60
           N+L++ N+   +SDFG++++L  +D   T T +   I   + AP E     + ++  DV+
Sbjct: 137 NILVNSNLECKVSDFGLSRVL-EDDPEGTYTTSGGKIPIRWTAP-EAIAYRKFTSASDVW 194

Query: 61  SFGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQ 119
           SFGI++ E  +  ++P  +M + E              VM+ ++      +     A   
Sbjct: 195 SFGIVMWEVMSFGERPYWDMSNHE--------------VMKAIN------DGFRLPAPMD 234

Query: 120 CVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
           C S V+ L ++C  +   RR    +IV  L K+
Sbjct: 235 CPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 44.4 bits (105), Expect = 6e-06
 Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 4/75 (5%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P NVLLDD+    +SD G+A  L G            T GYMAP E  +      + D +
Sbjct: 123 PENVLLDDHGNVRISDLGLAVELKGGK---KIKGRAGTPGYMAP-EVLQGEVYDFSVDWF 178

Query: 61  SFGIMLMEAFTRKKP 75
           + G  L E    + P
Sbjct: 179 ALGCTLYEMIAGRSP 193

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 44.3 bits (105), Expect = 6e-06
 Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 6/80 (7%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVS---TNG 57
           PSNVL++ N    L DFGI+  L+    S+ +T       YMAP     E          
Sbjct: 132 PSNVLINRNGQVKLCDFGISGYLV---DSVAKTIDAGCKPYMAPERINPELNQKGYDVKS 188

Query: 58  DVYSFGIMLMEAFTRKKPTD 77
           DV+S GI ++E  T + P D
Sbjct: 189 DVWSLGITMIELATGRFPYD 208

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 44.0 bits (104), Expect = 7e-06
 Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 5/75 (6%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
            +N+LL  N +  + D GI+K+L    ++M +TQ   T  YMAP E  +    S   D++
Sbjct: 131 SANILLVANDLVKIGDLGISKVL---KKNMAKTQI-GTPHYMAP-EVWKGRPYSYKSDIW 185

Query: 61  SFGIMLMEAFTRKKP 75
           S G +L E  T   P
Sbjct: 186 SLGCLLYEMATFAPP 200

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 44.0 bits (104), Expect = 8e-06
 Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 21/137 (15%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N L+ ++ V  +SDFG+A+ ++ +DQ  +   T   + +  P E     R S+  DV+SF
Sbjct: 130 NCLVGEDNVVKVSDFGLARYVL-DDQYTSSQGTKFPVKWAPP-EVFDYSRFSSKSDVWSF 187

Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
           G+++ E F+          G+M  +R+ N      V+E V A    R  R     +   +
Sbjct: 188 GVLMWEVFS---------EGKMPYERFSNS----EVVESVSAGY--RLYR----PKLAPT 228

Query: 123 FVFNLAMECTIESPERR 139
            V+ +   C  E PE R
Sbjct: 229 EVYTIMYSCWHEKPEDR 245

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 44.2 bits (104), Expect = 8e-06
 Identities = 38/150 (25%), Positives = 60/150 (40%), Gaps = 25/150 (16%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATI--GYMAPVEYGREGRVSTNGDVY 60
           N L+ +N V  +SDFG+++    ED  +  +  L  I   + AP E    GR S+  DV+
Sbjct: 123 NCLVGENNVLKISDFGMSR---QEDDGIYSSSGLKQIPIKWTAP-EALNYGRYSSESDVW 178

Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           S+GI+L E F+                     +     M    A     +    +  Q+C
Sbjct: 179 SYGILLWETFSL-------------------GVCPYPGMTNQQAREQVEKGYRMSCPQKC 219

Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELS 150
              V+ +   C    PE R    E+  EL+
Sbjct: 220 PDDVYKVMQRCWDYKPENRPKFSELQKELA 249

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 43.6 bits (103), Expect = 1e-05
 Identities = 35/155 (22%), Positives = 66/155 (42%), Gaps = 28/155 (18%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLAT--IGYMAPVEYGREGRVSTNGDVY 60
           N +LD++    ++DFG+A+ +  ++       T A   + +MA +E  +  + +T  DV+
Sbjct: 128 NCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMA-LESLQTQKFTTKSDVW 186

Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTR---EDRHFAAK 117
           SFG++L E  TR  P                          VD+  +T    + R     
Sbjct: 187 SFGVLLWELMTRGAPP----------------------YPDVDSFDITVYLLQGRRLLQP 224

Query: 118 QQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
           + C   ++ + + C    PE R    E+V+ + +I
Sbjct: 225 EYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQI 259

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 43.7 bits (104), Expect = 1e-05
 Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 25/101 (24%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIG-------------------Y 41
           P N+LLD +M   ++DFG AK+L   + S    +  AT                     Y
Sbjct: 130 PENILLDKDMHIKITDFGTAKVL-DPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEY 188

Query: 42  MAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMFSG 82
           ++P E   E     + D+++ G ++ +  T K P    F G
Sbjct: 189 VSP-ELLNEKPAGKSSDLWALGCIIYQMLTGKPP----FRG 224

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 43.6 bits (103), Expect = 1e-05
 Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 5/68 (7%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           PSN+LL       L DFG++  L+    S+  T T  T  YMAP E  +    S   DV+
Sbjct: 133 PSNILLTRKGQVKLCDFGVSGELV---NSLAGTFT-GTSFYMAP-ERIQGKPYSITSDVW 187

Query: 61  SFGIMLME 68
           S G+ L+E
Sbjct: 188 SLGLTLLE 195

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 43.4 bits (102), Expect = 1e-05
 Identities = 34/147 (23%), Positives = 63/147 (42%), Gaps = 20/147 (13%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N L+   +V  + DFG+++ +   D      +T+  I +M P E     + +T  D++SF
Sbjct: 152 NCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPP-ESILYRKFTTESDIWSF 210

Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
           G++L E FT  K            + W      +S  E ++      + R     + C  
Sbjct: 211 GVVLWEIFTYGK------------QPW----YQLSNTEAIEC---ITQGRELERPRTCPP 251

Query: 123 FVFNLAMECTIESPERRINAKEIVTEL 149
            V+ +   C    P++R+  K+I + L
Sbjct: 252 EVYAIMQGCWQREPQQRMVIKDIHSRL 278

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 43.4 bits (102), Expect = 1e-05
 Identities = 39/142 (27%), Positives = 63/142 (44%), Gaps = 25/142 (17%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLAT--IGYMAPVEYGREGRVSTNGDVY 60
           NVLL +   A +SDFG++K L G D S  + ++     + + AP E     + S+  DV+
Sbjct: 125 NVLLVNQHYAKISDFGLSKAL-GADDSYYKARSAGKWPLKWYAP-ECINFRKFSSRSDVW 182

Query: 61  SFGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQ 119
           S+GI + EAF+  +KP  +M   E              VM  ++        +      +
Sbjct: 183 SYGITMWEAFSYGQKPYKKMKGPE--------------VMSFIEQG------KRLDCPAE 222

Query: 120 CVSFVFNLAMECTIESPERRIN 141
           C   ++ L  +C I   E R N
Sbjct: 223 CPPEMYALMKDCWIYKWEDRPN 244

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 43.6 bits (103), Expect = 1e-05
 Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 23/154 (14%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+       ++DFG+AKLL  +++          I +MA  E       +   DV+S+
Sbjct: 139 NVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMAL-ESILHRIYTHKSDVWSY 197

Query: 63  GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G+ + E  T   KP +                  +  +E+ D  LL + +R       C 
Sbjct: 198 GVTVWELMTFGAKPYE-----------------GIPAVEIPD--LLEKGER-LPQPPICT 237

Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI-RD 154
             V+ + ++C +   E R   KE++ E SK+ RD
Sbjct: 238 IDVYMVLVKCWMIDAESRPTFKELINEFSKMARD 271

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 43.5 bits (102), Expect = 1e-05
 Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 4/75 (5%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P N+LLDD+    +SD G+A + + E Q++     + T+GYMAP E  +  R + + D +
Sbjct: 130 PENILLDDHGHIRISDLGLA-VHVPEGQTI--KGRVGTVGYMAP-EVVKNERYTFSPDWW 185

Query: 61  SFGIMLMEAFTRKKP 75
           + G +L E    + P
Sbjct: 186 ALGCLLYEMIAGQSP 200

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 43.2 bits (102), Expect = 2e-05
 Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 20/149 (13%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N L+ +N V  +SDFG+++   G   +++       I + AP E    GR ++  DV+S+
Sbjct: 123 NCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAP-EALNYGRYTSESDVWSY 181

Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
           GI+L E F+          G+       N        E +++           A Q C  
Sbjct: 182 GILLWETFSL---------GDTPYPGMSNQ----QTRERIESGY------RMPAPQLCPE 222

Query: 123 FVFNLAMECTIESPERRINAKEIVTELSK 151
            ++ L ++C    PE R +  EI  EL  
Sbjct: 223 EIYRLMLQCWAYDPENRPSFSEIYNELQI 251

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 43.2 bits (102), Expect = 2e-05
 Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 12/95 (12%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P N+LLD      L+DFG+ K  I E  ++T T    TI YMAP    R G      D +
Sbjct: 128 PENILLDAQGHVKLTDFGLCKESIHEG-TVTHT-FCGTIEYMAPEILMRSGH-GKAVDWW 184

Query: 61  SFGIMLMEAFT---------RKKPTDEMFSGEMTL 86
           S G ++ +  T         RKK  D++  G++ L
Sbjct: 185 SLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNL 219

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 43.2 bits (102), Expect = 2e-05
 Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 1/72 (1%)

Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           SN+LL++     L+DFG+A+L   E+     T  + T+ Y  P     E R     DV+S
Sbjct: 145 SNILLNNKGQIKLADFGLARLYNSEESRP-YTNKVITLWYRPPELLLGEERYGPAIDVWS 203

Query: 62  FGIMLMEAFTRK 73
            G +L E FT+K
Sbjct: 204 CGCILGELFTKK 215

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 43.0 bits (101), Expect = 2e-05
 Identities = 40/157 (25%), Positives = 63/157 (40%), Gaps = 34/157 (21%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTN-GDVYS 61
           NVL+ ++ V  ++DFG+A+ +   D     +     + +MAP       RV T+  DV+S
Sbjct: 164 NVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAP--EALFDRVYTHQSDVWS 221

Query: 62  FGIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA 115
           FGI++ E FT         P +E+F                          L RE     
Sbjct: 222 FGILMWEIFTLGGSPYPGIPVEELFK-------------------------LLREGHRMD 256

Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
               C   ++ L  EC    P +R   K++V  L K+
Sbjct: 257 KPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKV 293

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 42.9 bits (101), Expect = 2e-05
 Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 5/78 (6%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           PSN+L++      L DFG++  LI    S+  T  + T  YM+P E  + G+ +   DV+
Sbjct: 132 PSNILVNSRGQIKLCDFGVSGELI---NSIADT-FVGTSTYMSP-ERIQGGKYTVKSDVW 186

Query: 61  SFGIMLMEAFTRKKPTDE 78
           S GI ++E    K P   
Sbjct: 187 SLGISIIELALGKFPFAF 204

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 43.0 bits (101), Expect = 2e-05
 Identities = 33/95 (34%), Positives = 42/95 (44%), Gaps = 7/95 (7%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P NVLLDD     LSD G+A  L       T TQ   T GYMAP E  +E   S   D +
Sbjct: 123 PENVLLDDQGNCRLSDLGLAVELKD---GKTITQRAGTNGYMAP-EILKEEPYSYPVDWF 178

Query: 61  SFGIMLMEAFTRKKP---TDEMFSGEMTLKRWIND 92
           + G  + E    + P     E  + E   +R + D
Sbjct: 179 AMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLED 213

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 42.7 bits (100), Expect = 2e-05
 Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 1/69 (1%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVLL    +  + DFG+A+ ++ +   +++  T   + +MAP E   +   +T  DV+S+
Sbjct: 267 NVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAP-ESIFDNLYTTLSDVWSY 325

Query: 63  GIMLMEAFT 71
           GI+L E F+
Sbjct: 326 GILLWEIFS 334

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 42.4 bits (100), Expect = 3e-05
 Identities = 37/163 (22%), Positives = 65/163 (39%), Gaps = 28/163 (17%)

Query: 3   NVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           N+L++      + DFG+ K+L   ++    +    + I + AP E   E + S   DV+S
Sbjct: 138 NILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAP-ESLTESKFSVASDVWS 196

Query: 62  FGIMLMEAFT----RKKPTDEMFS-------GEMTLKRWINDLLSVSVMEVVDANLLTRE 110
           FG++L E FT       P  E          G+M +   I                L + 
Sbjct: 197 FGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIE---------------LLKN 241

Query: 111 DRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIR 153
           +    A   C + ++ +  EC    P +R +  E+  ++  IR
Sbjct: 242 NGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAIR 284

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 42.5 bits (100), Expect = 3e-05
 Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 1/69 (1%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVLL    +  + DFG+A+ ++ +   + +      + +MAP E       +   DV+S+
Sbjct: 171 NVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAP-ESIFNCVYTFESDVWSY 229

Query: 63  GIMLMEAFT 71
           GI+L E F+
Sbjct: 230 GILLWEIFS 238

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 42.3 bits (99), Expect = 4e-05
 Identities = 34/149 (22%), Positives = 66/149 (44%), Gaps = 20/149 (13%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N ++ ++    + DFG+ + +   D      + L  + +M+P E  ++G  +T  DV+SF
Sbjct: 149 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP-ESLKDGVFTTYSDVWSF 207

Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
           G++L E  T  +   +  S E  L+             V++  LL + D        C  
Sbjct: 208 GVVLWEIATLAEQPYQGMSNEQVLRF------------VMEGGLLDKPD-------NCPD 248

Query: 123 FVFNLAMECTIESPERRINAKEIVTELSK 151
            +F L   C   +P+ R +  EI++ + +
Sbjct: 249 MLFELMRMCWQYNPKMRPSFLEIISSIKE 277

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 42.3 bits (99), Expect = 4e-05
 Identities = 38/157 (24%), Positives = 64/157 (40%), Gaps = 34/157 (21%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTN-GDVYS 61
           NVL+ ++ V  ++DFG+A+ +   D     T     + +MAP       RV T+  DV+S
Sbjct: 164 NVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAP--EALFDRVYTHQSDVWS 221

Query: 62  FGIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA 115
           FG++L E FT         P +E+F                          L +E     
Sbjct: 222 FGVLLWEIFTLGGSPYPGIPVEELFK-------------------------LLKEGHRMD 256

Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
               C   ++ +  EC    P +R   K++V +L ++
Sbjct: 257 KPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRV 293

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 41.7 bits (98), Expect = 5e-05
 Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 20/86 (23%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQ-TQTLATIGYMAPVEYGREGRVSTN--- 56
           PSN+L++      ++DFG++++L    Q+M     ++ TI YM+P       R++T+   
Sbjct: 196 PSNLLINSAKNVKIADFGVSRIL---AQTMDPCNSSVGTIAYMSP------ERINTDLNH 246

Query: 57  -------GDVYSFGIMLMEAFTRKKP 75
                  GD++S G+ ++E +  + P
Sbjct: 247 GAYDGYAGDIWSLGVSILEFYLGRFP 272

Length = 353

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 41.5 bits (97), Expect = 7e-05
 Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 4/66 (6%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+ +N+ + ++DFG+++   GE+  + +T     + +MA +E       +T  DV+SF
Sbjct: 149 NVLVGENLASKIADFGLSR---GEEVYVKKTMGRLPVRWMA-IESLNYSVYTTKSDVWSF 204

Query: 63  GIMLME 68
           G++L E
Sbjct: 205 GVLLWE 210

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 41.5 bits (97), Expect = 7e-05
 Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 1/69 (1%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+ +  +  + DFG+A+ ++ +   +++  T   + +MAP E       +T  DV+SF
Sbjct: 269 NVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAP-ESIFNNLYTTLSDVWSF 327

Query: 63  GIMLMEAFT 71
           GI+L E FT
Sbjct: 328 GILLWEIFT 336

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 41.2 bits (96), Expect = 7e-05
 Identities = 41/156 (26%), Positives = 61/156 (39%), Gaps = 38/156 (24%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATI--GYMAPVEYGREGRVSTNGDVY 60
           N L+ +  V  +SDFG+++    ED     T  +  I   + AP E    GR S+  DV+
Sbjct: 124 NCLVTEKNVLKISDFGMSRE--EEDGVYASTGGMKQIPVKWTAP-EALNYGRYSSESDVW 180

Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAK--- 117
           SFGI+L EAF                          S+  V  ANL  ++ R    +   
Sbjct: 181 SFGILLWEAF--------------------------SLGAVPYANLSNQQTREAIEQGVR 214

Query: 118 ----QQCVSFVFNLAMECTIESPERRINAKEIVTEL 149
               + C   V+ L   C    P +R +   +  EL
Sbjct: 215 LPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQEL 250

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 40.6 bits (95), Expect = 1e-04
 Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 3/86 (3%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N L+DD     +SDFG+++ ++ +D+  +   +   + +  P E     + S+  DV++F
Sbjct: 130 NCLVDDQGCVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPP-EVLLYSKFSSKSDVWAF 187

Query: 63  GIMLMEAFTR-KKPTDEMFSGEMTLK 87
           G+++ E ++  K P +   + E   K
Sbjct: 188 GVLMWEVYSLGKMPYERFNNSETVEK 213

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 40.8 bits (95), Expect = 1e-04
 Identities = 38/157 (24%), Positives = 64/157 (40%), Gaps = 34/157 (21%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTN-GDVYS 61
           NVL+ +N V  ++DFG+A+ +   D     T     + +MAP       RV T+  DV+S
Sbjct: 167 NVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAP--EALFDRVYTHQSDVWS 224

Query: 62  FGIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA 115
           FG+++ E FT         P +E+F                          L +E     
Sbjct: 225 FGVLMWEIFTLGGSPYPGIPVEELFK-------------------------LLKEGHRMD 259

Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
               C + ++ +  +C    P  R   K++V +L +I
Sbjct: 260 KPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRI 296

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 40.6 bits (95), Expect = 1e-04
 Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N+LL +N V  + DFG+A+ +  +   + +      + +MAP E   +   +T  DV+SF
Sbjct: 203 NILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP-ESIFDKVYTTQSDVWSF 261

Query: 63  GIMLMEAFT 71
           G++L E F+
Sbjct: 262 GVLLWEIFS 270

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 40.5 bits (95), Expect = 1e-04
 Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 9/77 (11%)

Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIG---YMAPVEYGREGRVSTNGD 58
           +N+L+D N V  L+DFG+AK      Q +  +   +  G   +MAP    ++G      D
Sbjct: 131 ANILVDTNGVVKLADFGMAK------QVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAAD 184

Query: 59  VYSFGIMLMEAFTRKKP 75
           ++S G  ++E  T K P
Sbjct: 185 IWSLGCTVLEMATGKPP 201

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 40.3 bits (94), Expect = 1e-04
 Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 1/69 (1%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N L+ ++    ++DFG+++ L   D    Q + +  I +MA  E    G+ +T  DV++F
Sbjct: 159 NCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMA-WESILLGKFTTASDVWAF 217

Query: 63  GIMLMEAFT 71
           G+ L E FT
Sbjct: 218 GVTLWEMFT 226

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 40.5 bits (95), Expect = 2e-04
 Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 25/154 (16%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSM-TQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           NVL+       L DFG+++ L  ED+S    ++    I +MAP E     R ++  DV+ 
Sbjct: 137 NVLVSSPDCVKLGDFGLSRYL--EDESYYKASKGKLPIKWMAP-ESINFRRFTSASDVWM 193

Query: 62  FGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           FG+ + E      KP    F G   +K   ND++            +   +R       C
Sbjct: 194 FGVCMWEILMLGVKP----FQG---VKN--NDVIGR----------IENGER-LPMPPNC 233

Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRD 154
              +++L  +C    P +R    E+  +LS I  
Sbjct: 234 PPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ 267

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 40.2 bits (94), Expect = 2e-04
 Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 6/80 (7%)

Query: 3   NVLLDD-NMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP--VEYGREGRVSTNGDV 59
           NVL++  + V  +SDFG +K L G +   T+T T  T+ YMAP  ++ G  G      D+
Sbjct: 138 NVLVNTYSGVVKISDFGTSKRLAGIN-PCTETFT-GTLQYMAPEVIDKGPRGY-GAPADI 194

Query: 60  YSFGIMLMEAFTRKKPTDEM 79
           +S G  ++E  T K P  E+
Sbjct: 195 WSLGCTIVEMATGKPPFIEL 214

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 40.2 bits (94), Expect = 2e-04
 Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 3/85 (3%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N+ LD      + D G+AKLL   D +      + T  Y++P E   +   +   DV++ 
Sbjct: 131 NLFLDAYDNVKIGDLGVAKLL--SDNTNFANTIVGTPYYLSP-ELCEDKPYNEKSDVWAL 187

Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLK 87
           G++L E  T K P D    G + LK
Sbjct: 188 GVVLYECCTGKHPFDANNQGALILK 212

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 40.4 bits (94), Expect = 2e-04
 Identities = 21/66 (31%), Positives = 41/66 (62%), Gaps = 4/66 (6%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N+L+ +N VA ++DFG+++   G++  + +T     + +MA +E       +TN DV+S+
Sbjct: 154 NILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRWMA-IESLNYSVYTTNSDVWSY 209

Query: 63  GIMLME 68
           G++L E
Sbjct: 210 GVLLWE 215

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 18/90 (20%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIG--EDQSMTQTQTLATIGYMAP------VEYGREGR 52
           PSN+L++++    + DFG+A+ L     +     T+ +AT  Y AP       EY     
Sbjct: 135 PSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEY----- 189

Query: 53  VSTNGDVYSFGIMLMEAFTRKKPTDEMFSG 82
            +T  D++S G +  E   R+    ++F G
Sbjct: 190 -TTAIDMWSVGCIFAEMLGRR----QLFPG 214

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 39.9 bits (93), Expect = 2e-04
 Identities = 37/153 (24%), Positives = 69/153 (45%), Gaps = 23/153 (15%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA---TIGYMAPVEYGREGRVSTNGDV 59
           N+L++ N+V  +SDFG+++ L  +    T T +L     I + AP E     + ++  DV
Sbjct: 136 NILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAP-EAIAYRKFTSASDV 194

Query: 60  YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQ 119
           +S+GI++ E          M  GE    R   D+ +  V+  ++      +D        
Sbjct: 195 WSYGIVMWEV---------MSYGE----RPYWDMSNQDVINAIE------QDYRLPPPMD 235

Query: 120 CVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
           C + +  L ++C  +    R    +IV+ L K+
Sbjct: 236 CPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 39.8 bits (93), Expect = 2e-04
 Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 2/74 (2%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP-VEYGREGRVSTNGDVYS 61
           N+LLD      L+DFG++K  + E++    +    TI YMAP V  G  G      D +S
Sbjct: 135 NILLDSEGHVVLTDFGLSKEFLAEEEERAYS-FCGTIEYMAPEVIRGGSGGHDKAVDWWS 193

Query: 62  FGIMLMEAFTRKKP 75
            G++  E  T   P
Sbjct: 194 LGVLTFELLTGASP 207

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 39.9 bits (93), Expect = 3e-04
 Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 13/103 (12%)

Query: 3   NVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           NVLLD++ +  + DFG+AK +  G +    +    + + + A  E  +E + S   DV+S
Sbjct: 137 NVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAV-ECLKENKFSYASDVWS 195

Query: 62  FGIMLMEAFTRKKPT-------DEMF---SGEMTLKRWINDLL 94
           FG+ L E  T            +EM     G+MT+ R I +LL
Sbjct: 196 FGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLI-ELL 237

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 39.6 bits (92), Expect = 3e-04
 Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N+LL +N V  + DFG+A+ +  +   + +      + +MAP E   +   +T  DV+SF
Sbjct: 204 NILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAP-ESIFDKVYTTQSDVWSF 262

Query: 63  GIMLMEAFT 71
           G++L E F+
Sbjct: 263 GVLLWEIFS 271

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 39.5 bits (93), Expect = 3e-04
 Identities = 30/89 (33%), Positives = 39/89 (43%), Gaps = 20/89 (22%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL-ATIGYMAP-----VEYGREGRVS 54
           P N+LLD N    L DFG AK L    +S  +T T   T  Y+AP       Y       
Sbjct: 121 PENLLLDSNGYVKLVDFGFAKKL----KSGQKTWTFCGTPEYVAPEIILNKGYDF----- 171

Query: 55  TNGDVYSFGIMLMEAFTRKKPTDEMFSGE 83
            + D +S GI+L E  T + P    F  +
Sbjct: 172 -SVDYWSLGILLYELLTGRPP----FGED 195

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 39.6 bits (93), Expect = 3e-04
 Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 22/148 (14%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N L+  N    ++DFG+++ L   D    Q +    I +MA  E    G+ +T  DV++F
Sbjct: 160 NCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMA-WESVLLGKFTTKSDVWAF 218

Query: 63  GIMLMEAFT--RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTRED---RHFAAK 117
           G+ L E  T  R++P +               L    V+E  +A    R+D    +    
Sbjct: 219 GVTLWEILTLCREQPYEH--------------LTDQQVIE--NAGHFFRDDGRQIYLPRP 262

Query: 118 QQCVSFVFNLAMECTIESPERRINAKEI 145
             C   ++ L +EC     E R   +EI
Sbjct: 263 PNCPKDIYELMLECWRRDEEDRPTFREI 290

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 39.6 bits (92), Expect = 3e-04
 Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 1/69 (1%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N+LL +N V  + DFG+A+ +  +   + +      + +MAP E   +   +   DV+SF
Sbjct: 209 NILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP-ETIFDRVYTIQSDVWSF 267

Query: 63  GIMLMEAFT 71
           G++L E F+
Sbjct: 268 GVLLWEIFS 276

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 39.6 bits (92), Expect = 3e-04
 Identities = 36/156 (23%), Positives = 64/156 (41%), Gaps = 32/156 (20%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+ ++ V  ++DFG+A+ +   D     T     + +MAP E   +   +   DV+SF
Sbjct: 170 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP-EALFDRIYTHQSDVWSF 228

Query: 63  GIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAA 116
           G++L E FT         P +E+F                          L +E      
Sbjct: 229 GVLLWEIFTLGGSPYPGVPVEELFK-------------------------LLKEGHRMDK 263

Query: 117 KQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
              C + ++ +  +C    P +R   K++V +L +I
Sbjct: 264 PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 299

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 39.3 bits (92), Expect = 3e-04
 Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 25/146 (17%)

Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGY-MAPVEYGREGRV-STNGDV 59
           +N+L+ +     L DFG+A LL   +Q+ ++  T     Y MAP E   EG+   T  D+
Sbjct: 130 ANILVTNTGNVKLCDFGVAALL---NQNSSKRSTFVGTPYWMAP-EVITEGKYYDTKADI 185

Query: 60  YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQ 119
           +S GI + E  T   P    +S     +         ++M +  +     ED  ++   +
Sbjct: 186 WSLGITIYEMATGNPP----YSDVDAFR---------AMMLIPKSKPPRLEDNGYSKLLR 232

Query: 120 CVSFVFNLAMECTIESPERRINAKEI 145
              FV      C  E P+ R++A+E+
Sbjct: 233 --EFV----AACLDEEPKERLSAEEL 252

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 39.2 bits (91), Expect = 3e-04
 Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 23/154 (14%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+       ++DFG+AKLL  +++          I +MA +E       +   DV+S+
Sbjct: 139 NVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 197

Query: 63  GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G+ + E  T   KP D + + E+                   +++L + +R       C 
Sbjct: 198 GVTVWELMTFGSKPYDGIPASEI-------------------SSILEKGER-LPQPPICT 237

Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI-RD 154
             V+ + ++C +   + R   +E++ E SK+ RD
Sbjct: 238 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 271

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 39.4 bits (92), Expect = 4e-04
 Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 1/69 (1%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVLL D  VA + DFG+A+ ++ +   + +      + +MAP E   +   +   DV+S+
Sbjct: 242 NVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAP-ESIFDCVYTVQSDVWSY 300

Query: 63  GIMLMEAFT 71
           GI+L E F+
Sbjct: 301 GILLWEIFS 309

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 39.2 bits (91), Expect = 4e-04
 Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 1/73 (1%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N+LLD      L+DFG++K  + E++  T +    TI YMAP     +G      D +S 
Sbjct: 135 NILLDSEGHVVLTDFGLSKEFLSEEKERTYS-FCGTIEYMAPEIIRGKGGHGKAVDWWSL 193

Query: 63  GIMLMEAFTRKKP 75
           GI++ E  T   P
Sbjct: 194 GILIFELLTGASP 206

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 39.0 bits (91), Expect = 5e-04
 Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 1/69 (1%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N L+ +NMV  ++DFG+++ +   D           I +M P E     R +T  DV+++
Sbjct: 160 NCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWM-PPESIFYNRYTTESDVWAY 218

Query: 63  GIMLMEAFT 71
           G++L E F+
Sbjct: 219 GVVLWEIFS 227

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 38.9 bits (90), Expect = 5e-04
 Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           +NVL+ ++++  ++DFG+A+ +I +++   +      I + AP E    G  +   DV+S
Sbjct: 132 ANVLVSESLMCKIADFGLAR-VIEDNEYTAREGAKFPIKWTAP-EAINFGSFTIKSDVWS 189

Query: 62  FGIMLMEAFTRKK 74
           FGI+L E  T  K
Sbjct: 190 FGILLYEIVTYGK 202

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 38.8 bits (90), Expect = 5e-04
 Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 4/74 (5%)

Query: 3   NVLLDDN-MVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           N+ L  N MVA L DFGIA+ L   + SM    T     Y    E  +    +   D++S
Sbjct: 131 NIFLSKNGMVAKLGDFGIARQL---NDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWS 187

Query: 62  FGIMLMEAFTRKKP 75
            G +L E  T K P
Sbjct: 188 LGCVLYELCTLKHP 201

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 38.7 bits (90), Expect = 5e-04
 Identities = 36/141 (25%), Positives = 60/141 (42%), Gaps = 27/141 (19%)

Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           +N+L+ + +   ++DFG+A+L I +++   +      I + AP E    G  +   DV+S
Sbjct: 131 ANILVSETLCCKIADFGLARL-IEDNEYTAREGAKFPIKWTAP-EAINYGTFTIKSDVWS 188

Query: 62  FGIMLMEAFTRKK-PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQ-- 118
           FGI+L E  T  + P   M + E                  V  NL    +R +   +  
Sbjct: 189 FGILLTEIVTYGRIPYPGMTNPE------------------VIQNL----ERGYRMPRPD 226

Query: 119 QCVSFVFNLAMECTIESPERR 139
            C   ++ L   C  E PE R
Sbjct: 227 NCPEELYELMRLCWKEKPEER 247

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 38.8 bits (91), Expect = 5e-04
 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 9/76 (11%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIG---YMAPVEYGREGRVSTNGDV 59
           N+LL++   A L+DFG++  L     +M +  T+  IG   +MAP E  +E   +   D+
Sbjct: 129 NILLNEEGQAKLADFGVSGQLTD---TMAKRNTV--IGTPFWMAP-EVIQEIGYNNKADI 182

Query: 60  YSFGIMLMEAFTRKKP 75
           +S GI  +E    K P
Sbjct: 183 WSLGITAIEMAEGKPP 198

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 38.8 bits (90), Expect = 6e-04
 Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 2/74 (2%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP-VEYGREGRVSTNGDVYS 61
           N+LLD N    L+DFG++K    ED+         TI YMAP +  G +G      D +S
Sbjct: 135 NILLDSNGHVVLTDFGLSKEFH-EDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWS 193

Query: 62  FGIMLMEAFTRKKP 75
            G+++ E  T   P
Sbjct: 194 MGVLMYELLTGASP 207

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 38.6 bits (90), Expect = 6e-04
 Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 19/118 (16%)

Query: 34  QTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDL 93
             L  + ++AP E  +E   ST  DV+SFG+++ E FT          GE+      ++ 
Sbjct: 177 NALIPLRWLAP-EAVQEDDFSTKSDVWSFGVLMWEVFT---------QGELPFYGLSDE- 225

Query: 94  LSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSK 151
                 EV+  N L          + C S ++ L   C   +P+ R +  E+V+ L +
Sbjct: 226 ------EVL--NRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 39.1 bits (91), Expect = 7e-04
 Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 9/79 (11%)

Query: 1   PSNVLL---DDNMVAHLSDFGIAKLLIGEDQSMTQTQTLAT--IG---YMAPVEYGREGR 52
           P N+++        A + DFGI  LL G   +   T T  T  +G   Y AP E  R   
Sbjct: 107 PQNIMVSQTGVRPHAKVLDFGIGTLLPGVRDADVATLTRTTEVLGTPTYCAP-EQLRGEP 165

Query: 53  VSTNGDVYSFGIMLMEAFT 71
           V+ N D+Y++G++ +E  T
Sbjct: 166 VTPNSDLYAWGLIFLECLT 184

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 38.5 bits (89), Expect = 7e-04
 Identities = 21/66 (31%), Positives = 41/66 (62%), Gaps = 4/66 (6%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N+L+ +N VA ++DFG+++   G++  + +T     + +MA +E       +TN DV+S+
Sbjct: 142 NILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRWMA-IESLNYSVYTTNSDVWSY 197

Query: 63  GIMLME 68
           G++L E
Sbjct: 198 GVLLWE 203

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 38.7 bits (90), Expect = 7e-04
 Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 1/76 (1%)

Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           +N+LL  N +  L DFG +K+               T  Y+AP E  R    S   D++S
Sbjct: 172 ANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAP-EIWRRKPYSKKADMFS 230

Query: 62  FGIMLMEAFTRKKPTD 77
            G++L E  T K+P D
Sbjct: 231 LGVLLYELLTLKRPFD 246

Length = 496

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 38.4 bits (89), Expect = 8e-04
 Identities = 36/147 (24%), Positives = 62/147 (42%), Gaps = 20/147 (13%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N ++  +    + DFG+ + +   D      + L  + +MAP E  ++G  +T+ D++SF
Sbjct: 149 NCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP-ESLKDGVFTTSSDMWSF 207

Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
           G++L E  +  +   +  S E  LK             V+D   L + D        C  
Sbjct: 208 GVVLWEITSLAEQPYQGLSNEQVLKF------------VMDGGYLDQPD-------NCPE 248

Query: 123 FVFNLAMECTIESPERRINAKEIVTEL 149
            V +L   C   +P+ R    EIV  L
Sbjct: 249 RVTDLMRMCWQFNPKMRPTFLEIVNLL 275

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 38.2 bits (89), Expect = 8e-04
 Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 11/85 (12%)

Query: 3   NVLLDDNMVAHLSDFGIAKL---LIGEDQSMTQTQTLATIGYMAP--VEYGREGRVSTNG 57
           N+L+D + +  +SDFGI+K    +   DQ+M+      ++ +MAP  +    +G  S   
Sbjct: 138 NLLVDADGICKISDFGISKKSDDIYDNDQNMSMQ---GSVFWMAPEVIHSYSQG-YSAKV 193

Query: 58  DVYSFGIMLMEAFTRKKP--TDEMF 80
           D++S G +++E F  ++P   +E  
Sbjct: 194 DIWSLGCVVLEMFAGRRPWSDEEAI 218

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 38.3 bits (89), Expect = 8e-04
 Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)

Query: 11  VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAF 70
           V  + DFG+A+ +   D    + + L  + +MAP E   +G+ +T  DV+SFG+++ E  
Sbjct: 149 VVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAP-ESLLDGKFTTQSDVWSFGVLMWEIL 207

Query: 71  T 71
           T
Sbjct: 208 T 208

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 38.0 bits (89), Expect = 0.001
 Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 3/74 (4%)

Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           +N+L   + V  L+DFG+A  L    +       + T  +MAP E       ST  D++S
Sbjct: 128 ANILTTKDGVVKLADFGVATKLNDVSK--DDASVVGTPYWMAP-EVIEMSGASTASDIWS 184

Query: 62  FGIMLMEAFTRKKP 75
            G  ++E  T   P
Sbjct: 185 LGCTVIELLTGNPP 198

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 37.9 bits (88), Expect = 0.001
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 5/76 (6%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP-VEYGREGRVSTNGDV 59
           P NVLLD++    +SD G+A  L  + QS T+     T G+MAP +  G E   S   D 
Sbjct: 125 PENVLLDNDGNVRISDLGLAVELK-DGQSKTKGYA-GTPGFMAPELLQGEEYDFSV--DY 180

Query: 60  YSFGIMLMEAFTRKKP 75
           ++ G+ L E    + P
Sbjct: 181 FALGVTLYEMIAARGP 196

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 37.6 bits (87), Expect = 0.001
 Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 12/93 (12%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPVEYGREGRVSTNGDV 59
           P+N+LLD++    +SD G+A      D S  +   ++ T GYMAP    +     ++ D 
Sbjct: 125 PANILLDEHGHVRISDLGLAC-----DFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADW 179

Query: 60  YSFGIMLME------AFTRKKPTDEMFSGEMTL 86
           +S G ML +       F + K  D+     MTL
Sbjct: 180 FSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 212

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 37.9 bits (88), Expect = 0.001
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 4/75 (5%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P N+LLDD     +SD G+A + I E +++     + T+GYMAP E  +  R + + D +
Sbjct: 130 PENILLDDYGHIRISDLGLA-VEIPEGETI--RGRVGTVGYMAP-EVVKNERYTFSPDWW 185

Query: 61  SFGIMLMEAFTRKKP 75
             G ++ E    K P
Sbjct: 186 GLGCLIYEMIEGKSP 200

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 37.7 bits (87), Expect = 0.001
 Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 12/93 (12%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPVEYGREGRVSTNGDV 59
           P+N+LLD++    +SD G+A      D S  +   ++ T GYMAP    +     ++ D 
Sbjct: 125 PANILLDEHGHVRISDLGLAC-----DFSKKKPHASVGTHGYMAPEVLQKGTAYDSSADW 179

Query: 60  YSFGIMLME------AFTRKKPTDEMFSGEMTL 86
           +S G ML +       F + K  D+     MTL
Sbjct: 180 FSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 212

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 37.7 bits (88), Expect = 0.001
 Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 14/79 (17%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP------VEYGREGRVS 54
           PSN+LL+ N    + DFG+A+    +   M  T+ + T  Y AP       EY       
Sbjct: 136 PSNLLLNANCDLKICDFGLARTTSEKGDFM--TEYVVTRWYRAPELLLNCSEYT------ 187

Query: 55  TNGDVYSFGIMLMEAFTRK 73
           T  DV+S G +  E   RK
Sbjct: 188 TAIDVWSVGCIFAELLGRK 206

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 37.6 bits (87), Expect = 0.001
 Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 5/86 (5%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           PSN+L++      L DFG++  L+    S+ +T  + T  YMAP     E +   + DV+
Sbjct: 123 PSNMLVNTRGQVKLCDFGVSTQLV---NSIAKTY-VGTNAYMAPERISGE-QYGIHSDVW 177

Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTL 86
           S GI  ME    + P  ++   + +L
Sbjct: 178 SLGISFMELALGRFPYPQIQKNQGSL 203

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 37.6 bits (87), Expect = 0.001
 Identities = 34/161 (21%), Positives = 58/161 (36%), Gaps = 27/161 (16%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL-ATIGYMAPVEYGREGRVSTNGDVYS 61
           NVL++      + DFG+ K +  + +  T    L + + + AP E   + +     DV+S
Sbjct: 139 NVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAP-ECLIQSKFYIASDVWS 197

Query: 62  FGIMLMEAFT----RKKPTDEMFS------GEMTLKRWINDLLSVSVMEVVDANLLTRED 111
           FG+ L E  T       P            G+MT+ R +  L                E 
Sbjct: 198 FGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVL---------------EEG 242

Query: 112 RHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
           +       C   V+ L  +C    P +R   + ++     I
Sbjct: 243 KRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 37.3 bits (87), Expect = 0.001
 Identities = 36/149 (24%), Positives = 64/149 (42%), Gaps = 20/149 (13%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N+L++ N+V  +SDFG+++ L   + + T       I + AP E     + ++  DV+SF
Sbjct: 136 NILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAP-EAIAYRKFTSASDVWSF 194

Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
           GI++ E          M  GE       N      V++ V+      +         C S
Sbjct: 195 GIVMWEV---------MSYGERPYWDMSNQ----DVIKAVE------DGYRLPPPMDCPS 235

Query: 123 FVFNLAMECTIESPERRINAKEIVTELSK 151
            ++ L ++C  +    R    +IV+ L K
Sbjct: 236 ALYQLMLDCWQKDRNERPTFSQIVSTLDK 264

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 37.4 bits (87), Expect = 0.001
 Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)

Query: 11  VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAF 70
           VA ++DFG+A+ +          + +  I +M P E   +G  ++  DV+SFG++L E F
Sbjct: 157 VAKIADFGMARDIYRASYYRKGGRAMLPIKWMPP-EAFLDGIFTSKTDVWSFGVLLWEIF 215

Query: 71  T 71
           +
Sbjct: 216 S 216

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 37.3 bits (86), Expect = 0.002
 Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 4/75 (5%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P N+LLDD     +SD G+A + I E +S+     + T+GYMAP E     R + + D +
Sbjct: 130 PENILLDDYGHIRISDLGLA-VKIPEGESI--RGRVGTVGYMAP-EVLNNQRYTLSPDYW 185

Query: 61  SFGIMLMEAFTRKKP 75
             G ++ E    + P
Sbjct: 186 GLGCLIYEMIEGQSP 200

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 37.2 bits (86), Expect = 0.002
 Identities = 35/151 (23%), Positives = 71/151 (47%), Gaps = 21/151 (13%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGE-DQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           N+L++ N+V  +SDFG++++L  + + + T       I + AP E     + ++  DV+S
Sbjct: 136 NILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAP-EAIAYRKFTSASDVWS 194

Query: 62  FGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           +GI++ E          M  GE     W  ++ +  V++ ++      E     A   C 
Sbjct: 195 YGIVMWEV---------MSYGERPY--W--EMSNQDVIKAIE------EGYRLPAPMDCP 235

Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
           + +  L ++C  +    R   ++IV+ L K+
Sbjct: 236 AALHQLMLDCWQKDRNERPKFEQIVSILDKL 266

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 36.9 bits (85), Expect = 0.002
 Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 3/84 (3%)

Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           +N+L+  ++V  ++DFG+A++ I +++   +      I + AP E    G  +   DV+S
Sbjct: 131 ANILVSASLVCKIADFGLARV-IEDNEYTAREGAKFPIKWTAP-EAINFGSFTIKSDVWS 188

Query: 62  FGIMLMEAFTR-KKPTDEMFSGEM 84
           FGI+LME  T  + P   M + E+
Sbjct: 189 FGILLMEIVTYGRIPYPGMSNPEV 212

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 36.6 bits (85), Expect = 0.003
 Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N ++ +++   + DFG+ + +   D      + L  + +MAP E  ++G  +T  DV+SF
Sbjct: 149 NCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP-ESLKDGVFTTKSDVWSF 207

Query: 63  GIMLMEAFT 71
           G++L E  T
Sbjct: 208 GVVLWEMAT 216

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 36.6 bits (85), Expect = 0.003
 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 5/68 (7%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           PSN+L++      L DFG++  LI    SM  +  + T  YM+P E  +    +   D++
Sbjct: 128 PSNILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSP-ERLQGTHYTVQSDIW 182

Query: 61  SFGIMLME 68
           S G+ L+E
Sbjct: 183 SLGLSLVE 190

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 36.5 bits (85), Expect = 0.003
 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 2/73 (2%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P N+L++   V  L+DFG+A+           T  + T  Y AP     +   ST  D++
Sbjct: 126 PENLLINTEGVLKLADFGLARSFGS--PVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIW 183

Query: 61  SFGIMLMEAFTRK 73
           S G +  E  +R+
Sbjct: 184 SVGCIFAELLSRR 196

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 36.5 bits (84), Expect = 0.003
 Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 23/154 (14%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+       ++DFG+A+LL  ++           I +MA +E     R +   DV+S+
Sbjct: 139 NVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMA-LESILHRRFTHQSDVWSY 197

Query: 63  GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G+ + E  T   KP D                  +   E+ D  LL + +R       C 
Sbjct: 198 GVTVWELMTFGAKPYD-----------------GIPAREIPD--LLEKGER-LPQPPICT 237

Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI-RD 154
             V+ + ++C +   E R   +E+V E S++ RD
Sbjct: 238 IDVYMIMVKCWMIDSECRPRFRELVDEFSRMARD 271

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 36.4 bits (85), Expect = 0.004
 Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 3/66 (4%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N+LL  +    L+DFG A  L  +++S   +  + T  +MAP E  +        D++S 
Sbjct: 146 NILLSKDGSVKLADFGFAAQL-TKEKSKRNSV-VGTPYWMAP-EVIKRKDYGPKVDIWSL 202

Query: 63  GIMLME 68
           GIM +E
Sbjct: 203 GIMCIE 208

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 36.4 bits (84), Expect = 0.004
 Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 5/78 (6%)

Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMT---QTQTL-ATIGYMAPVEYGREGRVSTNG 57
           +N+L+D+     +SDFGI+K L     S        +L  ++ +MAP E  ++   +   
Sbjct: 135 ANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAP-EVVKQTSYTRKA 193

Query: 58  DVYSFGIMLMEAFTRKKP 75
           D++S G +++E  T K P
Sbjct: 194 DIWSLGCLVVEMLTGKHP 211

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 36.3 bits (84), Expect = 0.004
 Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 30/164 (18%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P N+L++ N V  + DFG+A++    D+S   TQ + T  Y AP         ++  D++
Sbjct: 131 PGNLLVNSNCVLKICDFGLARVE-EPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIW 189

Query: 61  SFGIMLMEAFTRKKPTDEMF--SGEMTLKRWINDLLSVSVMEVVD-------ANLLTRED 111
           S G +  E   R+     +F     +     I DLL    +E +        A++L    
Sbjct: 190 SVGCIFAELLGRRI----LFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRG-- 243

Query: 112 RHFAAKQQCVSFVFNLAMECTIES-----------PERRINAKE 144
                K   +  ++ L+ + T E+           P++RI+A +
Sbjct: 244 ---PHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAAD 284

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 36.2 bits (84), Expect = 0.004
 Identities = 38/148 (25%), Positives = 57/148 (38%), Gaps = 28/148 (18%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP-VEYGREGRVSTNGDV 59
           P N L+D +    L+DFG++K ++    S+     + +  YMAP V  G+    +   D 
Sbjct: 129 PENFLIDASGHIKLTDFGLSKGIVTYANSV-----VGSPDYMAPEVLRGKGYDFTV--DY 181

Query: 60  YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTR---EDRHFAA 116
           +S G ML E      P    FSG    + W N L             L R   +D  F  
Sbjct: 182 WSLGCMLYEFLCGFPP----FSGSTPNETWEN-LKYWKET-------LQRPVYDDPRFNL 229

Query: 117 KQQCVSFVFNLAMECTIESPERRINAKE 144
             +    +  L  +     P RR  + E
Sbjct: 230 SDEAWDLITKLIND-----PSRRFGSLE 252

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	164
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.95
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.95
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.94
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.94
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.93
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.93
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.93
KOG0578	550	consensus p21-activated serine/threonine protein k	99.93
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.92
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.92
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.92
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.92
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.92
PHA02988	283	hypothetical protein; Provisional	99.91
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.91
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.91
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.91
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.91
KOG0198	313	consensus MEKK and related serine/threonine protei	99.91
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.91
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.91
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.9
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.9
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.9
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.89
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.89
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.89
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.89
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.89
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.89
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.89
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.89
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.89
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.89
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.89
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.89
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.89
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.88
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.88
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.88
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.88
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.88
PTZ00283	496	serine/threonine protein kinase; Provisional	99.88
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.88
PTZ00036	440	glycogen synthase kinase; Provisional	99.88
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.88
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.88
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.88
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.88
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.88
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.88
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.88
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.87
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.87
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.87
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.87
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.87
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.87
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.87
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.87
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.87
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.87
PHA02882	294	putative serine/threonine kinase; Provisional	99.87
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.87
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.87
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.87
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.87
PTZ00267	478	NIMA-related protein kinase; Provisional	99.87
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.87
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.87
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.87
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.87
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.87
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.87
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.87
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.87
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.87
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.87
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.87
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.87
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.87
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.86
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.86
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.86
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.86
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.86
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.86
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.86
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.86
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.86
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.86
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.86
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.86
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.86
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.86
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.86
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.86
KOG0589	426	consensus Serine/threonine protein kinase [General	99.86
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.86
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.86
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.86
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.86
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.86
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.86
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.86
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.86
PTZ00284	467	protein kinase; Provisional	99.86
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.86
PHA03207	392	serine/threonine kinase US3; Provisional	99.86
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.86
PHA03212	391	serine/threonine kinase US3; Provisional	99.86
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.86
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.86
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.85
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.85
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.85
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.85
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.85
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.85
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.85
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.85
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.85
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.85
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.85
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.85
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.85
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.85
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.85
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.85
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.85
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.85
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.85
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.85
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.85
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.85
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.85
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.85
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.85
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.85
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.85
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.85
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.85
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.84
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.84
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.84
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.84
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.84
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.84
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.84
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.84
PHA03211	461	serine/threonine kinase US3; Provisional	99.84
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.84
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.84
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.84
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.84
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.84
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.84
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.84
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.84
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.84
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.84
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.84
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.84
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.84
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.84
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.84
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.84
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.84
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.84
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.84
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.84
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.84
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.84
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.84
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.84
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.84
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.84
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.84
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.84
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.84
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.84
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.84
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.84
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.84
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.84
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.84
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.84
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.84
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.84
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.84
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.84
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.84
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.83
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.83
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.83
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.83
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.83
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.83
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.83
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.83
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.83
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.83
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.83
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.83
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.83
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.83
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.83
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.83
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.83
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.83
PHA03209	357	serine/threonine kinase US3; Provisional	99.83
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.83
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.83
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.83
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.83
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.83
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.83
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.83
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.83
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.83
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.83
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.83
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.83
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.83
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.83
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.83
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.83
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.83
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.83
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.83
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.82
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.82
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.82
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.82
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.82
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.82
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.82
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.82
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.82
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.82
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.82
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.82
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.82
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.82
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.82
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.82
PHA03210	501	serine/threonine kinase US3; Provisional	99.82
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.82
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.82
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.82
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.82
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.82
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.82
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.82
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.82
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.82
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.82
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.82
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.82
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.82
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.82
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.81
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.81
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.81
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.81
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.81
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.81
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.81
KOG0605	550	consensus NDR and related serine/threonine kinases	99.81
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.81
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.81
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.81
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.81
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.81
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.81
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.81
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.81
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.81
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.81
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.81
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.81
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.81
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.81
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.81
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.81
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.81
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.81
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.81
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.81
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.81
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.81
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.8
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.8
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.8
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.8
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.8
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.8
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.8
PLN00009	294	cyclin-dependent kinase A; Provisional	99.8
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.8
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.8
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.8
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.8
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.8
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.8
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.8
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.8
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.8
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.8
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.8
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.8
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.79
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.79
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.79
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.79
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.79
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.79
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.79
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.79
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.79
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.79
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.79
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.79
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.79
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.79
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.79
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.79
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.79
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.79
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.78
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.78
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.78
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.78
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.78
KOG0584	632	consensus Serine/threonine protein kinase [General	99.78
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.78
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.78
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.77
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.77
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.77
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.77
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.77
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.77
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.77
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.77
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.77
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.77
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.77
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.77
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.77
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.77
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.76
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.76
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.76
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.76
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.76
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.76
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.76
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.76
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.75
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.75
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.75
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.75
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.75
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.75
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.75
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.75
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.75
KOG3653	534	consensus Transforming growth factor beta/activin	99.74
PLN00181	793	protein SPA1-RELATED; Provisional	99.74
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.74
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.74
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.73
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.73
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.73
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.73
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.73
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.72
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.72
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.72
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.72
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.72
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.72
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.71
KOG0610	459	consensus Putative serine/threonine protein kinase	99.71
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.71
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.69
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.69
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.68
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.68
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.66
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.64
KOG0586	596	consensus Serine/threonine protein kinase [General	99.62
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.59
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.59
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.57
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.55
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.55
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.54
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.54
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.5
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.49
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.44
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.42
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.36
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.26
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.15
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.14
KOG1152	772	consensus Signal transduction serine/threonine kin	99.14
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.13
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.11
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.05
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.0
COG0515	384	SPS1 Serine/threonine protein kinase [General func	98.94
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	98.8
KOG0590	601	consensus Checkpoint kinase and related serine/thr	98.75
COG4248	637	Uncharacterized protein with protein kinase and he	98.56
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	98.13
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	97.99
PRK12274	218	serine/threonine protein kinase; Provisional	97.97
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	97.82
KOG2137	700	consensus Protein kinase [Signal transduction mech	97.71
KOG0606	1205	consensus Microtubule-associated serine/threonine	97.5
PRK09188	365	serine/threonine protein kinase; Provisional	97.47
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	97.35
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	97.33
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	97.02
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	97.01
KOG1266	458	consensus Protein kinase [Signal transduction mech	96.31
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	94.08
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	93.16
KOG1093	725	consensus Predicted protein kinase (contains TBC a	92.77
smart00090	237	RIO RIO-like kinase.	92.05
KOG1243	690	consensus Protein kinase [General function predict	91.85
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	91.83
PRK14879	211	serine/threonine protein kinase; Provisional	90.93
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	90.19
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	88.38
PRK09605	535	bifunctional UGMP family protein/serine/threonine	87.68
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	86.09
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	83.01
PRK10345	210	hypothetical protein; Provisional	80.27

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.95  E-value=1.4e-28  Score=172.89  Aligned_cols=132  Identities=32%  Similarity=0.547  Sum_probs=103.3

Q ss_pred             cceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCccc
Q 039452            2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEMF   80 (164)
Q Consensus         2 ~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~~   80 (164)
                      .||||+.+..+||+|||+|+.. ....+........+..|.|| |.+....|+.++||||||+++||++| |+.|+..+.
T Consensus       332 RNiLV~~~~~vKIsDFGLAr~~-~d~~Y~~~~~~kfPIkWtAP-Ea~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~ms  409 (468)
T KOG0197|consen  332 RNILVDEDLVVKISDFGLARLI-GDDEYTASEGGKFPIKWTAP-EALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMS  409 (468)
T ss_pred             hheeeccCceEEEccccccccc-CCCceeecCCCCCCceecCH-HHHhhCCcccccceeehhhhHHHHhccCCCCCCCCC
Confidence            5999999999999999999954 33344444445567899999 55567779999999999999999997 788876542


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDS  155 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~  155 (164)
                      ..+              ..+.+      ....+.+.|..||..+.++|..||+.+|++|||++.+...++.+...
T Consensus       410 n~e--------------v~~~l------e~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~  464 (468)
T KOG0197|consen  410 NEE--------------VLELL------ERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS  464 (468)
T ss_pred             HHH--------------HHHHH------hccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence            211              11111      24455667788999999999999999999999999999988887654

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.95  E-value=1.4e-27  Score=166.70  Aligned_cols=137  Identities=26%  Similarity=0.390  Sum_probs=103.9

Q ss_pred             CcceEecCCc-eEEEeccccceeccCCCCccccccccccccccCchhhhc-cCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDDNM-VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGR-EGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+|||++.++ ++||+|||+++......  ...+...||..|||||.+.. ...++.++||||||+++||+++|..||..
T Consensus       171 ~~NiLv~~~~~~~KI~DFGlsr~~~~~~--~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~  248 (362)
T KOG0192|consen  171 SDNILVDLKGKTLKIADFGLSREKVISK--TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFED  248 (362)
T ss_pred             hhhEEEcCCCCEEEECCCccceeecccc--ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCC
Confidence            6899999997 99999999998752211  33344689999999966654 46799999999999999999999999987


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhhc
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFR  158 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~~  158 (164)
                      ......  ..           ..+.      ...+...+..+++.+..++..||..||++||++.+++..|+.+......
T Consensus       249 ~~~~~~--~~-----------~v~~------~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~  309 (362)
T KOG0192|consen  249 LAPVQV--AS-----------AVVV------GGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISS  309 (362)
T ss_pred             CCHHHH--HH-----------HHHh------cCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence            544111  10           0010      1111222333777799999999999999999999999999999887764

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.94  E-value=1.4e-27  Score=161.71  Aligned_cols=127  Identities=21%  Similarity=0.337  Sum_probs=96.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||||++.|.+||+|||.+..+.+.    .....+||..||+| |.+.+..++.++||||||+.++|+..|+.|+....
T Consensus       207 PsNlLvNskGeVKicDFGVS~~lvnS----~a~tfvGT~~YMsP-ERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~  281 (364)
T KOG0581|consen  207 PSNLLVNSKGEVKICDFGVSGILVNS----IANTFVGTSAYMSP-ERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPN  281 (364)
T ss_pred             HHHeeeccCCCEEeccccccHHhhhh----hcccccccccccCh-hhhcCCcCCcccceecccHHHHHHhhCCCCCCCcC
Confidence            78999999999999999999887332    55678999999999 55556678999999999999999999999987541


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHH-HHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQ-QCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .....            ..++++....   ..+...|. .+++++++++..||+.||.+|||++++++
T Consensus       282 ~~~~~------------~~~Ll~~Iv~---~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~  334 (364)
T KOG0581|consen  282 PPYLD------------IFELLCAIVD---EPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ  334 (364)
T ss_pred             CCCCC------------HHHHHHHHhc---CCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            21111            1122222211   11112233 47888999999999999999999999986

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.94  E-value=4.6e-27  Score=156.03  Aligned_cols=143  Identities=20%  Similarity=0.288  Sum_probs=102.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||||+.+|.+||+|||+|+.+..  .....+..+.|.+|+|||.++...++..++|||++||++.||++|.+.|.+. 
T Consensus       129 PENILit~~gvvKLCDFGFAR~L~~--pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~-  205 (396)
T KOG0593|consen  129 PENILITQNGVVKLCDFGFARTLSA--PGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGR-  205 (396)
T ss_pred             hhheEEecCCcEEeccchhhHhhcC--CcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCc-
Confidence            8999999999999999999998742  2334566789999999988888888999999999999999999999998743 


Q ss_pred             cCchhHHHHHHHhhhhh---hHHHhhhhcc------ccc---chhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVS---VMEVVDANLL------TRE---DRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~------~~~---~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                       ++.+.-..+....+.-   ...++.....      +..   .......+..+..+.+++++||..||++|+|.++++.
T Consensus       206 -SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~  283 (396)
T KOG0593|consen  206 -SDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH  283 (396)
T ss_pred             -chHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence             3333333333333222   1222221110      000   1111112355667899999999999999999999875

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.93  E-value=4.2e-26  Score=150.21  Aligned_cols=126  Identities=23%  Similarity=0.362  Sum_probs=95.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |.||+|+.+|.+||+|||+++.+  .....-....+|||.||+| +.+....++.++||||+||++|||..-++||.+. 
T Consensus       156 PaNIFl~~~gvvKLGDfGL~r~l--~s~~tfA~S~VGTPyYMSP-E~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-  231 (375)
T KOG0591|consen  156 PANIFLTANGVVKLGDFGLGRFL--SSKTTFAHSLVGTPYYMSP-ERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-  231 (375)
T ss_pred             chheEEcCCCceeeccchhHhHh--cchhHHHHhhcCCCcccCH-HHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-
Confidence            78999999999999999999988  3344445678999999999 6666788999999999999999999999999753 


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhH-HHHHHHHHHHHhhccccCccCCCCHHHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAK-QQCVSFVFNLAMECTIESPERRINAKEIVTEL  149 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l  149 (164)
                                      ++..+..+....  ..+ +.| ...+..+..++..|+..||+.||+...++..+
T Consensus       232 ----------------n~~~L~~KI~qg--d~~-~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di  282 (375)
T KOG0591|consen  232 ----------------NLLSLCKKIEQG--DYP-PLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDI  282 (375)
T ss_pred             ----------------cHHHHHHHHHcC--CCC-CCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHH
Confidence                            111222222111  111 122 56677799999999999999999854444433

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=3.7e-26  Score=154.37  Aligned_cols=145  Identities=22%  Similarity=0.237  Sum_probs=103.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|+|++.+..+||+|||+||...........+..+.|.+|+|||.......++.+.||||.||++.||++|++.|.+. 
T Consensus       153 PsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~-  231 (359)
T KOG0660|consen  153 PSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGK-  231 (359)
T ss_pred             hhheeeccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCC-
Confidence            7899999999999999999998743322334467788999999988888888999999999999999999999998742 


Q ss_pred             cCchhHHHHHHHhhhhh------------hHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVS------------VMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                       ...+.-..+-...+.+            ....+..........-....+...+.+++++.+||..||.+|+|+++.++
T Consensus       232 -d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~  309 (359)
T KOG0660|consen  232 -DYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA  309 (359)
T ss_pred             -chHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence             2221112222222111            11222211111222223334567788999999999999999999999876

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=5.5e-26  Score=158.37  Aligned_cols=142  Identities=20%  Similarity=0.229  Sum_probs=101.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||+..+..+||+|||+||.....   ...+..+.|.+|+|||.++....++.+.|+|++||+++|+.+-++.|.+. 
T Consensus       138 PENiLi~~~~~iKiaDFGLARev~Sk---pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~-  213 (538)
T KOG0661|consen  138 PENILISGNDVIKIADFGLAREVRSK---PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGA-  213 (538)
T ss_pred             hhheEecccceeEecccccccccccC---CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCC-
Confidence            79999998889999999999986333   34467889999999999999999999999999999999999999988743 


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhh----------hcccccchh-hhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDA----------NLLTREDRH-FAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~-~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                       .+.+.-..+....+.+..+.+..          ........+ ...-..++.++.+++..|+.+||++||||+++++
T Consensus       214 -sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~  290 (538)
T KOG0661|consen  214 -SEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQ  290 (538)
T ss_pred             -cHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhc
Confidence             33332223333332221111111          110001111 1112347788999999999999999999999987

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=7.6e-26  Score=160.27  Aligned_cols=126  Identities=21%  Similarity=0.307  Sum_probs=98.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      ++|||++.+|.+||+|||++..+.  .........+||++|||| ++.....++++.||||+|++.+||+.|.+||....
T Consensus       397 SDnILL~~~g~vKltDFGFcaqi~--~~~~KR~TmVGTPYWMAP-EVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~  473 (550)
T KOG0578|consen  397 SDNILLTMDGSVKLTDFGFCAQIS--EEQSKRSTMVGTPYWMAP-EVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNEN  473 (550)
T ss_pred             cceeEeccCCcEEEeeeeeeeccc--cccCccccccCCCCccch-hhhhhcccCccccchhhhhHHHHHhcCCCCccCCC
Confidence            479999999999999999998873  333355678899999999 55566779999999999999999999999986321


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      +                +..+..  +.....+....+..+++.+.+++.+||..|+++|+++.+||+
T Consensus       474 P----------------lrAlyL--Ia~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~  522 (550)
T KOG0578|consen  474 P----------------LRALYL--IATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLE  522 (550)
T ss_pred             h----------------HHHHHH--HhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence            1                111111  112233444456778888999999999999999999999987

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.92  E-value=4.6e-26  Score=167.77  Aligned_cols=137  Identities=31%  Similarity=0.532  Sum_probs=110.3

Q ss_pred             cceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCccc
Q 039452            2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEMF   80 (164)
Q Consensus         2 ~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~~   80 (164)
                      .|+||+.+..|||+|||+++-..+...+.......-+..||+| |.+....|++.+||||||+++||+++ |..|+.+..
T Consensus       632 RNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMpp-EsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glS  710 (774)
T KOG1026|consen  632 RNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPP-ESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLS  710 (774)
T ss_pred             hhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCH-HHhhcCcccchhhhhhhhhhhhhhhccccCcccccc
Confidence            6999999999999999999987666666666566778899999 55557789999999999999999996 888988765


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhhcc
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRN  159 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~~~  159 (164)
                      ..+.              .+.++.+      .....|+.||..+++||..||+.+|.+||+++++-..|...-+.-...
T Consensus       711 n~EV--------------Ie~i~~g------~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~~~  769 (774)
T KOG1026|consen  711 NQEV--------------IECIRAG------QLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASPKY  769 (774)
T ss_pred             hHHH--------------HHHHHcC------CcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCccc
Confidence            4332              1222221      125567889999999999999999999999999999999887665543

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.92  E-value=2e-25  Score=159.38  Aligned_cols=122  Identities=21%  Similarity=0.325  Sum_probs=94.1

Q ss_pred             cceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcccc
Q 039452            2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMFS   81 (164)
Q Consensus         2 ~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~~   81 (164)
                      .|++++.+..+||+|||+|..+..  ......+..||+-|.|| |++....++..+||||+||++|.++.|++||+..  
T Consensus       147 GNlfL~~~~~VKIgDFGLAt~le~--~~Erk~TlCGTPNYIAP-EVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk--  221 (592)
T KOG0575|consen  147 GNLFLNENMNVKIGDFGLATQLEY--DGERKKTLCGTPNYIAP-EVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETK--  221 (592)
T ss_pred             hheeecCcCcEEecccceeeeecC--cccccceecCCCcccCh-hHhccCCCCCchhhhhhhhHHHhhhhCCCCcccc--
Confidence            499999999999999999988732  22234467899999999 5555677899999999999999999999999742  


Q ss_pred             CchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           82 GEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                                     .+.+..++...    .....|..++.++.+|+.++|+.||.+|||+++|+.
T Consensus       222 ---------------~vkety~~Ik~----~~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~  268 (592)
T KOG0575|consen  222 ---------------TVKETYNKIKL----NEYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLD  268 (592)
T ss_pred             ---------------hHHHHHHHHHh----cCcccccccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence                           12222222222    122234466777999999999999999999999986

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.92  E-value=6.8e-26  Score=155.55  Aligned_cols=128  Identities=22%  Similarity=0.303  Sum_probs=95.5

Q ss_pred             CcceEecCC---ceEEEeccccceeccCCCCccccccccccccccCchhhhccCc--ccCccchHhHHHHHHHHHhcCCC
Q 039452            1 PSNVLLDDN---MVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGR--VSTNGDVYSFGIMLMEAFTRKKP   75 (164)
Q Consensus         1 p~Nill~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~--~~~~~Di~s~g~~~~~~~~g~~p   75 (164)
                      |+|||++.+   ..+||+|||+|....   .........||+.|.|||++...+.  ...++|+||+||++|-+++|.+|
T Consensus       304 PeNILl~~~~e~~llKItDFGlAK~~g---~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pP  380 (475)
T KOG0615|consen  304 PENILLSNDAEDCLLKITDFGLAKVSG---EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPP  380 (475)
T ss_pred             cceEEeccCCcceEEEecccchhhccc---cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCC
Confidence            899999765   889999999998752   2223345789999999977765443  44578999999999999999999


Q ss_pred             CCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           76 TDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      |+.......             +.+.+.   .............++.+.++++++||..||+.|||++++++
T Consensus       381 FS~~~~~~s-------------l~eQI~---~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~  436 (475)
T KOG0615|consen  381 FSEEYTDPS-------------LKEQIL---KGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALN  436 (475)
T ss_pred             cccccCCcc-------------HHHHHh---cCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence            986433221             111111   12233344455677888999999999999999999999986

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=2.5e-25  Score=153.66  Aligned_cols=124  Identities=23%  Similarity=0.323  Sum_probs=95.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      +.|||+..+|.+|++|||.+..+  ..........+||+.|||||++. ...++.++||||+|++.+||++|.+|+....
T Consensus       139 aanil~s~~g~vkl~DfgVa~ql--~~~~~rr~tfvGTPfwMAPEVI~-~~~Y~~KADIWSLGITaiEla~GePP~s~~h  215 (467)
T KOG0201|consen  139 AANILLSESGDVKLADFGVAGQL--TNTVKRRKTFVGTPFWMAPEVIK-QSGYDTKADIWSLGITAIELAKGEPPHSKLH  215 (467)
T ss_pred             ccceeEeccCcEEEEecceeeee--echhhccccccccccccchhhhc-cccccchhhhhhhhHHHHHHhcCCCCCcccC
Confidence            46999999999999999999887  33333346688999999995554 6679999999999999999999999998765


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      +....+                    ......+......+++.+.+++..||..||+.||||+++++
T Consensus       216 Pmrvlf--------------------lIpk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLK  262 (467)
T KOG0201|consen  216 PMRVLF--------------------LIPKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLK  262 (467)
T ss_pred             cceEEE--------------------eccCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence            432111                    01111111122256677999999999999999999999987

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.92  E-value=3.2e-25  Score=168.27  Aligned_cols=136  Identities=26%  Similarity=0.465  Sum_probs=105.9

Q ss_pred             cceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCccc
Q 039452            2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEMF   80 (164)
Q Consensus         2 ~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~~   80 (164)
                      .|+|++....+||+|||+|+-+.+...+........+..|||| |.+....|+.++||||||+++||+++ |..||....
T Consensus       831 RNCLL~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~P-Esl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~  909 (1025)
T KOG1095|consen  831 RNCLLDERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPP-ESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRS  909 (1025)
T ss_pred             hheeecccCcEEEcccchhHhhhhchheeccCccccceecCCH-HHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcc
Confidence            5999999999999999999966555555444444567899999 55556889999999999999999998 788886533


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhhc
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFR  158 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~~  158 (164)
                      +.+.              ...+      ....+...|..|+..++++|.+||+.+|++||++..+++.+.++.+..-.
T Consensus       910 n~~v--------------~~~~------~~ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~  967 (1025)
T KOG1095|consen  910 NFEV--------------LLDV------LEGGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALG  967 (1025)
T ss_pred             hHHH--------------HHHH------HhCCccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhcc
Confidence            2221              1111      01124556778888899999999999999999999999999998877654

>PHA02988 hypothetical protein; Provisional

Probab=99.91  E-value=7.1e-25  Score=150.35  Aligned_cols=130  Identities=22%  Similarity=0.330  Sum_probs=94.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhc-cCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGR-EGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||+++.+...     .....++..|+|||.... ...++.++|||||||++|++++|..||...
T Consensus       151 p~nill~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~  225 (283)
T PHA02988        151 SVSFLVTENYKLKIICHGLEKILSSP-----PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENL  225 (283)
T ss_pred             hhhEEECCCCcEEEcccchHhhhccc-----cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCC
Confidence            68999999999999999998765221     123467889999965543 256889999999999999999999999743


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRD  154 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~  154 (164)
                      ....  ...           ......      .....+..++..+.+++.+||+.||++|||+.++++.|++++.
T Consensus       226 ~~~~--~~~-----------~i~~~~------~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~  281 (283)
T PHA02988        226 TTKE--IYD-----------LIINKN------NSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF  281 (283)
T ss_pred             CHHH--HHH-----------HHHhcC------CCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence            2111  000           000000      0111222456678999999999999999999999999998863

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.91  E-value=3.1e-25  Score=160.01  Aligned_cols=123  Identities=25%  Similarity=0.319  Sum_probs=99.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|+|++..+.+||+|||+|..-   .........+|++-|.+||.+.+..+.+.++||||+|+|||.+++|+.||.+. 
T Consensus       140 pENlLLd~~~nIKIADFGMAsLe---~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDd-  215 (786)
T KOG0588|consen  140 PENLLLDVKNNIKIADFGMASLE---VPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDD-  215 (786)
T ss_pred             chhhhhhcccCEeeeccceeecc---cCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCc-
Confidence            78999998888999999999763   33445566789999999988887777889999999999999999999999742 


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                                      ++..++    .+.....+..|..++.++.+|+.+|+..||++|.|+++|++
T Consensus       216 ----------------Nir~LL----lKV~~G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~k  262 (786)
T KOG0588|consen  216 ----------------NIRVLL----LKVQRGVFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILK  262 (786)
T ss_pred             ----------------cHHHHH----HHHHcCcccCCCcCCHHHHHHHHHHhccCccccccHHHHhh
Confidence                            112222    22233445566778888999999999999999999999986

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.91  E-value=2.9e-25  Score=158.49  Aligned_cols=134  Identities=26%  Similarity=0.394  Sum_probs=106.2

Q ss_pred             cceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcccc
Q 039452            2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMFS   81 (164)
Q Consensus         2 ~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~~   81 (164)
                      -||||..+-.+||+|||.++.+...   ...-...||..|||| +++...+.+.++||||||+++|||+||..||.....
T Consensus       241 PNiLIs~~d~VKIsDFGTS~e~~~~---STkMSFaGTVaWMAP-EvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVds  316 (904)
T KOG4721|consen  241 PNILISYDDVVKISDFGTSKELSDK---STKMSFAGTVAWMAP-EVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDS  316 (904)
T ss_pred             CceEeeccceEEeccccchHhhhhh---hhhhhhhhhHhhhCH-HHhhcCCcccccceehhHHHHHHHHhcCCCccccch
Confidence            5999999999999999999875222   223346799999999 555567789999999999999999999999986433


Q ss_pred             CchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhhc
Q 039452           82 GEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFR  158 (164)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~~  158 (164)
                      ..+...                   ......+.+.|..|+..+.-|+++||+..|..|||+.+++..|+-...+++.
T Consensus       317 sAIIwG-------------------VGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pell~  374 (904)
T KOG4721|consen  317 SAIIWG-------------------VGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPELLS  374 (904)
T ss_pred             heeEEe-------------------ccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHHHhc
Confidence            221110                   1123345667889999999999999999999999999999999888777764

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.91  E-value=2.2e-24  Score=151.32  Aligned_cols=134  Identities=22%  Similarity=0.399  Sum_probs=94.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+|||++.++.+||+|||+++.+.............++..|+|||.+ ....++.++||||||+++|++++ |..||...
T Consensus       202 p~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~sDiwslG~il~el~~~g~~pf~~~  280 (338)
T cd05102         202 ARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESI-FDKVYTTQSDVWSFGVLLWEIFSLGASPYPGV  280 (338)
T ss_pred             cceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHh-hcCCCCcccCHHHHHHHHHHHHhCCCCCCCCC
Confidence            78999999999999999999765322222222233456789999554 45567899999999999999997 99998753


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRD  154 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~  154 (164)
                      ..... ...            .+....      ....+..+++.+.+++.+||+.||++|||+.++++.|+.+.+
T Consensus       281 ~~~~~-~~~------------~~~~~~------~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~  336 (338)
T cd05102         281 QINEE-FCQ------------RLKDGT------RMRAPENATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQ  336 (338)
T ss_pred             CccHH-HHH------------HHhcCC------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            22111 100            000000      011123345668999999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.91  E-value=2.2e-24  Score=140.86  Aligned_cols=142  Identities=19%  Similarity=0.228  Sum_probs=100.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |.|+||+.+|.+||+|||+++.+.  ......+..+-|.+|+|||.+.+...++..+|+||.||++.|++-|.+.|.+. 
T Consensus       129 PnNLLis~~g~lKiADFGLAr~f~--~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~-  205 (318)
T KOG0659|consen  129 PNNLLISSDGQLKIADFGLARFFG--SPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGD-  205 (318)
T ss_pred             ccceEEcCCCcEEeecccchhccC--CCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCC-
Confidence            789999999999999999999873  33333444578999999988888888999999999999999999988877642 


Q ss_pred             cCchhHHHHHHHhhhhh----------hHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVS----------VMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                       .+...-..+-...+.+          +.+.+.-...+. .........+++++.+++.++|.+||.+|+|+.++++
T Consensus       206 -sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~-~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~  280 (318)
T KOG0659|consen  206 -SDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPK-PPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALK  280 (318)
T ss_pred             -chHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCC-CccccccccccHHHHHHHHhhhccCchhcccHHHHhc
Confidence             2222222222222111          112111111111 1122245567778899999999999999999999887

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.91  E-value=3.1e-25  Score=151.30  Aligned_cols=133  Identities=26%  Similarity=0.314  Sum_probs=94.5

Q ss_pred             CcceEecC-CceEEEeccccceeccC-CCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDD-NMVAHLSDFGIAKLLIG-EDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~-~~~~kl~dfg~~~~~~~-~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+|||++. ++.+||+|||.+..... ...........||+.|++||.+..+......+||||+||++.||++|..||..
T Consensus       145 ~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~  224 (313)
T KOG0198|consen  145 PANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSE  224 (313)
T ss_pred             cceEEEeCCCCeEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchh
Confidence            68999999 79999999999887532 11122234567999999997776533344589999999999999999999874


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSK  151 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~  151 (164)
                      . ...              ...++......   .....|..++..+.+++.+|+..+|++||||+++++..--
T Consensus       225 ~-~~~--------------~~~~~~ig~~~---~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~  279 (313)
T KOG0198|consen  225 F-FEE--------------AEALLLIGRED---SLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFL  279 (313)
T ss_pred             h-cch--------------HHHHHHHhccC---CCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhh
Confidence            2 000              00111111111   1114455678889999999999999999999999985433

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=1.6e-24  Score=150.25  Aligned_cols=136  Identities=20%  Similarity=0.302  Sum_probs=95.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCcc-cc-ccccccccccCchhhhc-cCcccCccchHhHHHHHHHHHhcCCCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSM-TQ-TQTLATIGYMAPVEYGR-EGRVSTNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~-~~-~~~~~~~~~~~pe~~~~-~~~~~~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      +.||||+.+|.|||+|||.+..+....... .. ...+|++.|+|||.+.+ ...|+.++||||||+...|+.+|..||.
T Consensus       154 AgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~  233 (516)
T KOG0582|consen  154 AGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFS  233 (516)
T ss_pred             cccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcc
Confidence            469999999999999999887764333221 11 45689999999977443 4458999999999999999999999998


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ...+..+.+...-+.    . +...      ...............+++++..||..||.+|||++++++
T Consensus       234 k~pPmkvLl~tLqn~----p-p~~~------t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk  292 (516)
T KOG0582|consen  234 KYPPMKVLLLTLQND----P-PTLL------TSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK  292 (516)
T ss_pred             cCChHHHHHHHhcCC----C-CCcc------cccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence            765555433321111    0 0000      000011112234456999999999999999999999986

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.91  E-value=2.8e-23  Score=133.16  Aligned_cols=132  Identities=21%  Similarity=0.251  Sum_probs=91.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+++  ||.++.....       ...+++.|+|||.+ ....++.++||||+||++|++++|..||....
T Consensus        39 p~Nil~~~~~~~~~--fG~~~~~~~~-------~~~g~~~y~aPE~~-~~~~~~~~~DiwSlG~il~elltg~~p~~~~~  108 (176)
T smart00750       39 SGNILLTWDGLLKL--DGSVAFKTPE-------QSRVDPYFMAPEVI-QGQSYTEKADIYSLGITLYEALDYELPYNEER  108 (176)
T ss_pred             cccEeEcCccceee--ccceEeeccc-------cCCCcccccChHHh-cCCCCcchhhHHHHHHHHHHHHhCCCCccccc
Confidence            78999999999999  9998765221       12578999999555 45667889999999999999999999986432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHH--HHHHHHhhccccCccCCCCHHHHHHHHHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS--FVFNLAMECTIESPERRINAKEIVTELSKIRDS  155 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~  155 (164)
                      ............            .. .........+.....  .+.+++..||..+|++|||+.++++.+..+..+
T Consensus       109 ~~~~~~~~~~~~------------~~-~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~  172 (176)
T smart00750      109 ELSAILEILLNG------------MP-ADDPRDRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFAE  172 (176)
T ss_pred             hhcHHHHHHHHH------------hc-cCCccccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence            211111111110            00 000000111222233  589999999999999999999999988877654

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.90  E-value=1.6e-24  Score=155.98  Aligned_cols=135  Identities=22%  Similarity=0.357  Sum_probs=109.4

Q ss_pred             cceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCccc
Q 039452            2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEMF   80 (164)
Q Consensus         2 ~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~~   80 (164)
                      .|||+.+..++|++|||++|.+.....+ ..+....+..|++| +.++...|+.++|||-||+..||++. |..||.+..
T Consensus       520 RNiLVsSp~CVKLaDFGLSR~~ed~~yY-kaS~~kLPIKWmaP-ESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvk  597 (974)
T KOG4257|consen  520 RNILVSSPQCVKLADFGLSRYLEDDAYY-KASRGKLPIKWMAP-ESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVK  597 (974)
T ss_pred             hheeecCcceeeecccchhhhccccchh-hccccccceeecCc-cccchhcccchhhHHHHHHHHHHHHHhcCCcccccc
Confidence            5999999999999999999998554433 33345567899999 77778889999999999999999885 899998755


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhhc
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFR  158 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~~  158 (164)
                      +.+...                    ......+.+.|+.|++.++.+|.+||.++|.+||.+.++...|..+.+....
T Consensus       598 NsDVI~--------------------~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~qeek~  655 (974)
T KOG4257|consen  598 NSDVIG--------------------HIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQEEKI  655 (974)
T ss_pred             ccceEE--------------------EecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHHHhhh
Confidence            443211                    1123445667889999999999999999999999999999999999875443

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.90  E-value=1.6e-23  Score=141.91  Aligned_cols=142  Identities=22%  Similarity=0.232  Sum_probs=101.3

Q ss_pred             CcceEecCC-ceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDDN-MVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+|+|+|.+ |.+||+|||+|+.+..+..   ....+.+..|+|||.+.+...++.+.||||.||++.||+.|++.|.+.
T Consensus       153 PqNlLvD~~tg~LKicDFGSAK~L~~~ep---niSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~  229 (364)
T KOG0658|consen  153 PQNLLVDPDTGVLKICDFGSAKVLVKGEP---NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGD  229 (364)
T ss_pred             hheEEEcCCCCeEEeccCCcceeeccCCC---ceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCC
Confidence            789999965 9999999999998744333   245678999999988888888999999999999999999999999863


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhccc----------ccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLT----------REDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                       ++..++...+ +..+.+..+.+......          ......-.....++++.+++.++|.++|.+|.++.+++.
T Consensus       230 -s~~dQL~eIi-k~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~  305 (364)
T KOG0658|consen  230 -SSVDQLVEII-KVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA  305 (364)
T ss_pred             -CHHHHHHHHH-HHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence             3333333333 33333322222221111          000001123456778999999999999999999998875

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.90  E-value=4.1e-23  Score=145.01  Aligned_cols=147  Identities=37%  Similarity=0.624  Sum_probs=106.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccc-cccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQT-LATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~-~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+|||+|.++.+||+|||+++...  ......... .||.+|++| ++...+..+.++||||||++++|+++|+.+.+..
T Consensus       205 ssNILLD~~~~aKlsDFGLa~~~~--~~~~~~~~~~~gt~gY~~P-Ey~~~g~lt~KsDVySFGVvllElitgr~~~d~~  281 (361)
T KOG1187|consen  205 SSNILLDEDFNAKLSDFGLAKLGP--EGDTSVSTTVMGTFGYLAP-EYASTGKLTEKSDVYSFGVVLLELITGRKAVDQS  281 (361)
T ss_pred             HHHeeECCCCCEEccCccCcccCC--ccccceeeecCCCCccCCh-hhhccCCcCcccccccchHHHHHHHhCCcccCCC
Confidence            579999999999999999996541  101112222 799999999 5555577889999999999999999999887643


Q ss_pred             c-cCchhHHHHHHHhhhh-hhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHH
Q 039452           80 F-SGEMTLKRWINDLLSV-SVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRD  154 (164)
Q Consensus        80 ~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~  154 (164)
                      . .....+..|....... ...+++|..+........    .....+..++..|++.+|..||+|.+|++.|..+..
T Consensus       282 ~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~----~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~  354 (361)
T KOG1187|consen  282 RPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDE----KEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS  354 (361)
T ss_pred             CCcccccHHHHHHHHHHCcchhheeCCCccCCCCChH----HHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence            3 3344466766555543 566667666542111100    334448899999999999999999999998865543

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.89  E-value=1.3e-23  Score=143.91  Aligned_cols=130  Identities=28%  Similarity=0.538  Sum_probs=92.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.++|+|||+++...............++..|+|||.+ ....++.++|+||+||++|++++ |..||...
T Consensus       152 p~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~sDv~slG~il~el~~~g~~p~~~~  230 (283)
T cd05048         152 ARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAI-LYGKFTTESDIWSFGVVLWEIFSYGLQPYYGF  230 (283)
T ss_pred             cceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHh-ccCcCchhhhHHHHHHHHHHHHcCCCCCCCCC
Confidence            78999999999999999998765322222222334567889999654 34557889999999999999997 98898643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSK  151 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~  151 (164)
                      ...+  .            ...+.....      ...+..++..+.+++.+||+.||.+||++.++++.|+.
T Consensus       231 ~~~~--~------------~~~i~~~~~------~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         231 SNQE--V------------IEMIRSRQL------LPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             CHHH--H------------HHHHHcCCc------CCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence            2111  1            111111110      11234556779999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.89  E-value=1e-23  Score=152.29  Aligned_cols=131  Identities=24%  Similarity=0.398  Sum_probs=102.1

Q ss_pred             cceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCccc
Q 039452            2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEMF   80 (164)
Q Consensus         2 ~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~~   80 (164)
                      .|+|+..+..+||+|||++++|.+ ..+..+.....+..|.|| +.+....|+.++|||+||+++||+.+ |-.||.+..
T Consensus       394 RNCLVgEnhiVKvADFGLsRlMtg-DTYTAHAGAKFPIKWTAP-EsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGid  471 (1157)
T KOG4278|consen  394 RNCLVGENHIVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP-ESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID  471 (1157)
T ss_pred             hhccccccceEEeeccchhhhhcC-CceecccCccCcccccCc-ccccccccccchhhHHHHHHHHHHHhcCCCCCCCcc
Confidence            599999999999999999999843 333333444567889999 66667889999999999999999986 778886532


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRD  154 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~  154 (164)
                      ...              ..+++      ...++...|+.|++..++||..||+++|++||++.++.+.++.+..
T Consensus       472 lSq--------------VY~LL------EkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~  525 (1157)
T KOG4278|consen  472 LSQ--------------VYGLL------EKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFS  525 (1157)
T ss_pred             HHH--------------HHHHH------hccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence            111              12222      2334455678889999999999999999999999999999988764

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.89  E-value=2.2e-23  Score=147.53  Aligned_cols=125  Identities=20%  Similarity=0.334  Sum_probs=92.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc-----------cccccccccccccCchhhhccCcccCccchHhHHHHHHHH
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS-----------MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEA   69 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~-----------~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~   69 (164)
                      |+|||++.+++++|+|||.+..+......           ......+||-.|.+| |++.....+..+|+|+|||++|.|
T Consensus       202 PENILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSP-ElL~~~~~~~~sDiWAlGCilyQm  280 (604)
T KOG0592|consen  202 PENILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSP-ELLNDSPAGPSSDLWALGCILYQM  280 (604)
T ss_pred             hhheeEcCCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCH-HHhcCCCCCcccchHHHHHHHHHH
Confidence            79999999999999999999887421111           112457899999999 777788889999999999999999


Q ss_pred             HhcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           70 FTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        70 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      +.|++||....  +               ..++++.+....    ..++..++.+.+|+++.|..||++|+|+.++.+
T Consensus       281 laG~PPFra~N--e---------------yliFqkI~~l~y----~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~  337 (604)
T KOG0592|consen  281 LAGQPPFRAAN--E---------------YLIFQKIQALDY----EFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKA  337 (604)
T ss_pred             hcCCCCCcccc--H---------------HHHHHHHHHhcc----cCCCCCCHHHHHHHHHHHccCccccccHHHHhh
Confidence            99999997421  1               111122111111    122333466889999999999999999988766

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.89  E-value=2.6e-23  Score=142.90  Aligned_cols=143  Identities=21%  Similarity=0.211  Sum_probs=91.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||+++....  .........++..|+|||.+.....++.++|+||+||++|++++|..||....
T Consensus       131 p~Nil~~~~~~~kl~DfG~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~  208 (288)
T cd07871         131 PQNLLINEKGELKLADFGLARAKSV--PTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGST  208 (288)
T ss_pred             HHHEEECCCCCEEECcCcceeeccC--CCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999876421  11122345678899999766655668889999999999999999999996432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhh---------cccc--cchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDAN---------LLTR--EDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~--~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ... .... +.........+.....         ....  ..........+..++.+++.+||+.||.+|||++++++
T Consensus       209 ~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~  284 (288)
T cd07871         209 VKE-ELHL-IFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR  284 (288)
T ss_pred             HHH-HHHH-HHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            211 1111 1111111111111100         0000  00001111234567899999999999999999999875

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.89  E-value=1.1e-23  Score=138.65  Aligned_cols=127  Identities=25%  Similarity=0.385  Sum_probs=93.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhc--cCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGR--EGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~--~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+|||+|..|.+|++|||.+..+..   ....+...|.+.|||||.+.-  ...++.++||||+|+.++|+.+|+.||..
T Consensus       220 PSNILlDe~GniKlCDFGIsGrlvd---SkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~  296 (391)
T KOG0983|consen  220 PSNILLDERGNIKLCDFGISGRLVD---SKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKG  296 (391)
T ss_pred             ccceEEccCCCEEeecccccceeec---ccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCC
Confidence            7999999999999999999987633   333456678999999976632  34478899999999999999999999986


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ...+..-+.            .+++     ..++..+.....++.+.+++..||+.|+.+||-..++++
T Consensus       297 c~tdFe~lt------------kvln-----~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~  348 (391)
T KOG0983|consen  297 CKTDFEVLT------------KVLN-----EEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLE  348 (391)
T ss_pred             CCccHHHHH------------HHHh-----cCCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence            444332222            1121     111111111225667999999999999999999888875

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.89  E-value=4.6e-23  Score=144.56  Aligned_cols=134  Identities=23%  Similarity=0.411  Sum_probs=94.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.++|+|||+++.+.............++..|++||.+ ....++.++|+||+||++|++++ |..||...
T Consensus       201 p~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~  279 (337)
T cd05054         201 ARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESI-FDKVYTTQSDVWSFGVLLWEIFSLGASPYPGV  279 (337)
T ss_pred             cceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHh-cCCCCCccccHHHHHHHHHHHHHcCCCCCCCC
Confidence            78999999999999999999875322222222334456789999544 45668889999999999999997 99998643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRD  154 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~  154 (164)
                      ...+. +.            ..+.....      ...+....+.+.+++.+||+.+|++||++.++++.|+++.+
T Consensus       280 ~~~~~-~~------------~~~~~~~~------~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~  335 (337)
T cd05054         280 QIDEE-FC------------RRLKEGTR------MRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ  335 (337)
T ss_pred             CccHH-HH------------HHHhccCC------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            22111 11            11111100      01122334568899999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.89  E-value=4.1e-23  Score=145.05  Aligned_cols=144  Identities=22%  Similarity=0.233  Sum_probs=100.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      .+|||||.+|.+||+|||+|+++.. ......+..+-|.+|++||.++....++..+|+||.|||+.||+.|++.|.+. 
T Consensus       246 ~SNiLidn~G~LKiaDFGLAr~y~~-~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~-  323 (560)
T KOG0600|consen  246 GSNILIDNNGVLKIADFGLARFYTP-SGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGR-  323 (560)
T ss_pred             ccceEEcCCCCEEeccccceeeccC-CCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCc-
Confidence            3799999999999999999997632 22233556678999999988888888999999999999999999999998742 


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcc---------cccchh-hhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLL---------TREDRH-FAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~-~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                       .+......+-+.-..+..+.+.....         ....+. .......+...++|+..+|..||++|.||.++++
T Consensus       324 -tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~  399 (560)
T KOG0600|consen  324 -TEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ  399 (560)
T ss_pred             -cHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence             22222222222222222222211100         001111 1123456777899999999999999999998876

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.89  E-value=1.3e-23  Score=142.44  Aligned_cols=117  Identities=25%  Similarity=0.249  Sum_probs=85.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++..|+++|+|||+++....  ........+||+.|+||| +.....++..+|.||+|+++|+|++|.+||....
T Consensus       153 PENILLd~~GHi~LtDFgL~k~~~~--~~~~t~tfcGT~eYmAPE-il~~~gy~~~vDWWsLGillYeML~G~pPF~~~~  229 (357)
T KOG0598|consen  153 PENILLDEQGHIKLTDFGLCKEDLK--DGDATRTFCGTPEYMAPE-ILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAED  229 (357)
T ss_pred             HHHeeecCCCcEEEeccccchhccc--CCCccccccCCccccChH-HHhcCCCCcccchHhHHHHHHHHhhCCCCCcCcc
Confidence            7999999999999999999986421  212233468999999994 4455678999999999999999999999997532


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCC
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRI  140 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp  140 (164)
                      ..                 .+.++.....   ....+..++.++++++++.|..||++|.
T Consensus       230 ~~-----------------~~~~~I~~~k---~~~~p~~ls~~ardll~~LL~rdp~~RL  269 (357)
T KOG0598|consen  230 VK-----------------KMYDKILKGK---LPLPPGYLSEEARDLLKKLLKRDPRQRL  269 (357)
T ss_pred             HH-----------------HHHHHHhcCc---CCCCCccCCHHHHHHHHHHhccCHHHhc
Confidence            21                 1122211111   1112233566689999999999999996

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.89  E-value=3e-23  Score=147.98  Aligned_cols=123  Identities=25%  Similarity=0.393  Sum_probs=96.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |.|||++.+|.+|++|||+++.|  .......+...||+.|||| ++..+..++..+|.||+||++||++.|++||... 
T Consensus       128 PqniLl~~~~~~KlcdFg~Ar~m--~~~t~vltsikGtPlYmAP-Elv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~-  203 (808)
T KOG0597|consen  128 PQNILLEKGGTLKLCDFGLARAM--STNTSVLTSIKGTPLYMAP-ELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR-  203 (808)
T ss_pred             cceeeecCCCceeechhhhhhhc--ccCceeeeeccCcccccCH-HHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH-
Confidence            78999999999999999999998  3445566778899999999 5556888999999999999999999999999631 


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                                      ....++..+....    ...|...+..+.+++...|..||.+|.|+.+++.
T Consensus       204 ----------------si~~Lv~~I~~d~----v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~  250 (808)
T KOG0597|consen  204 ----------------SITQLVKSILKDP----VKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG  250 (808)
T ss_pred             ----------------HHHHHHHHHhcCC----CCCcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence                            1112222221111    1122366777999999999999999999998875

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.89  E-value=4.6e-23  Score=141.88  Aligned_cols=134  Identities=27%  Similarity=0.473  Sum_probs=94.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.++|+|||.+................++..|++|| ......++.++|+||+|+++|++++ |..||...
T Consensus       151 p~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~  229 (291)
T cd05094         151 TRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPE-SIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQL  229 (291)
T ss_pred             cceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChH-HhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            789999999999999999987643222222233445678899995 4445667889999999999999998 99998643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDS  155 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~  155 (164)
                      ....  .   .         +........      ..+..++..+.+++.+||+.+|++|||+.++++.|.++.+.
T Consensus       230 ~~~~--~---~---------~~~~~~~~~------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~  285 (291)
T cd05094         230 SNTE--V---I---------ECITQGRVL------ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA  285 (291)
T ss_pred             CHHH--H---H---------HHHhCCCCC------CCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence            2111  0   0         001110000      01122455688999999999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.89  E-value=4.3e-23  Score=141.84  Aligned_cols=134  Identities=26%  Similarity=0.468  Sum_probs=94.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.++|+|||.++...............++..|+||| ......++.++|+||||+++++|++ |..||...
T Consensus       148 p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE-~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~  226 (288)
T cd05093         148 TRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPE-SIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQL  226 (288)
T ss_pred             cceEEEccCCcEEeccCCccccccCCceeecCCCCCccccccCHH-HhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            789999999999999999987653222222223344567899995 4445668889999999999999998 88888643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDS  155 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~  155 (164)
                      ....  ..            ..+.....      ...+..++..+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus       227 ~~~~--~~------------~~i~~~~~------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~  282 (288)
T cd05093         227 SNNE--VI------------ECITQGRV------LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA  282 (288)
T ss_pred             CHHH--HH------------HHHHcCCc------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence            2111  00            00000000      001123445689999999999999999999999999988865

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.89  E-value=2.4e-23  Score=147.79  Aligned_cols=129  Identities=23%  Similarity=0.398  Sum_probs=87.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccC----------cccCccchHhHHHHHHHHH
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREG----------RVSTNGDVYSFGIMLMEAF   70 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~----------~~~~~~Di~s~g~~~~~~~   70 (164)
                      |.|+|+-+ |.+||.|||.|..+............+||+.||+||.+....          ..+.++||||+||++|+|+
T Consensus       488 PANFLlVk-G~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMv  566 (677)
T KOG0596|consen  488 PANFLLVK-GRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMV  566 (677)
T ss_pred             cccEEEEe-eeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHH
Confidence            67888776 679999999998774333344456678999999998764311          2567899999999999999


Q ss_pred             hcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           71 TRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        71 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .|+.||......-       .+     +..+.+..... ..+..+.    ..++.++|+.||.+||++|||+.+||+
T Consensus       567 YgktPf~~~~n~~-------aK-----l~aI~~P~~~I-efp~~~~----~~~li~~mK~CL~rdPkkR~si~eLLq  626 (677)
T KOG0596|consen  567 YGKTPFGQIINQI-------AK-----LHAITDPNHEI-EFPDIPE----NDELIDVMKCCLARDPKKRWSIPELLQ  626 (677)
T ss_pred             hcCCchHHHHHHH-------HH-----HHhhcCCCccc-cccCCCC----chHHHHHHHHHHhcCcccCCCcHHHhc
Confidence            9999996421111       00     11111111100 0000101    112889999999999999999999986

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.89  E-value=7.4e-23  Score=145.34  Aligned_cols=133  Identities=22%  Similarity=0.387  Sum_probs=92.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+|||++.++.+||+|||+++.+.............++..|+|||.+ ....++.++|+||+||++|++++ |..||...
T Consensus       240 p~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~  318 (374)
T cd05106         240 ARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESI-FDCVYTVQSDVWSYGILLWEIFSLGKSPYPGI  318 (374)
T ss_pred             hheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHh-cCCCCCccccHHHHHHHHHHHHhCCCCCCccc
Confidence            68999999999999999998765322221112223345679999554 45568899999999999999997 99998653


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIR  153 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~  153 (164)
                      ..... ..            .......      ....+...++++.+++.+||+.||++|||+.++++.|+++.
T Consensus       319 ~~~~~-~~------------~~~~~~~------~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~  373 (374)
T cd05106         319 LVNSK-FY------------KMVKRGY------QMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL  373 (374)
T ss_pred             cccHH-HH------------HHHHccc------CccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence            22111 11            1111100      00011223566899999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.88  E-value=3.9e-22  Score=136.54  Aligned_cols=134  Identities=25%  Similarity=0.426  Sum_probs=93.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||.++.+.............++..|++||.. ....++.++|+||||+++|++++ |..||...
T Consensus       137 p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~-~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~  215 (279)
T cd05111         137 ARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESI-LFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGM  215 (279)
T ss_pred             cceEEEcCCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHh-ccCCcCchhhHHHHHHHHHHHHcCCCCCCCCC
Confidence            68999999999999999999865322222222334466789999544 45568889999999999999998 99898643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDS  155 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~  155 (164)
                      ....              ..+.+......      ..+..++..+.+++..||..||++|||+.++++.|..+.+.
T Consensus       216 ~~~~--------------~~~~~~~~~~~------~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~  271 (279)
T cd05111         216 RPHE--------------VPDLLEKGERL------AQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD  271 (279)
T ss_pred             CHHH--------------HHHHHHCCCcC------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence            2111              11111111110      01122344578899999999999999999999999887754

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.88  E-value=2.3e-23  Score=134.93  Aligned_cols=136  Identities=21%  Similarity=0.326  Sum_probs=93.7

Q ss_pred             CcceEecCCceEEEeccccceecc----CCCCc---cccccccccccccCchhhh--ccCcccCccchHhHHHHHHHHHh
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLI----GEDQS---MTQTQTLATIGYMAPVEYG--REGRVSTNGDVYSFGIMLMEAFT   71 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~----~~~~~---~~~~~~~~~~~~~~pe~~~--~~~~~~~~~Di~s~g~~~~~~~~   71 (164)
                      |.|||++.++.+++.|||++....    +....   ..+.....|..|+|||.+.  .....+.++||||+||++|.++.
T Consensus       157 P~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf  236 (302)
T KOG2345|consen  157 PANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMF  236 (302)
T ss_pred             cceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHH
Confidence            789999999999999999987642    11111   1123456789999995543  23347789999999999999999


Q ss_pred             cCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHH
Q 039452           72 RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSK  151 (164)
Q Consensus        72 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~  151 (164)
                      |..||+........+            .=.+...     +...+.....+..+.++++.|++.||.+||++.+++..++.
T Consensus       237 ~~sPfe~~~~~GgSl------------aLAv~n~-----q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~  299 (302)
T KOG2345|consen  237 GESPFERIYQQGGSL------------ALAVQNA-----QISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDD  299 (302)
T ss_pred             cCCcchHHhhcCCeE------------EEeeecc-----ccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHh
Confidence            999997432211100            0001111     11111112256679999999999999999999999999887


Q ss_pred             HH
Q 039452          152 IR  153 (164)
Q Consensus       152 ~~  153 (164)
                      +.
T Consensus       300 Li  301 (302)
T KOG2345|consen  300 LI  301 (302)
T ss_pred             hc
Confidence            64

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.88  E-value=6.9e-23  Score=134.95  Aligned_cols=127  Identities=25%  Similarity=0.288  Sum_probs=96.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhc-----cCcccCccchHhHHHHHHHHHhcCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGR-----EGRVSTNGDVYSFGIMLMEAFTRKKP   75 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-----~~~~~~~~Di~s~g~~~~~~~~g~~p   75 (164)
                      |+|||++++..++|+|||++..+..+   .......||++|+|||.+..     ...++...|+|++|+++|.++.|.+|
T Consensus       151 pENILlddn~~i~isDFGFa~~l~~G---ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpP  227 (411)
T KOG0599|consen  151 PENILLDDNMNIKISDFGFACQLEPG---EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPP  227 (411)
T ss_pred             hhheeeccccceEEeccceeeccCCc---hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCc
Confidence            78999999999999999999887322   23456789999999976532     23477889999999999999999999


Q ss_pred             CCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           76 TDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      |-..  ..+               -+++-..........+.....+.+..+++.+||+.||.+|.|+++++.
T Consensus       228 FwHR--kQm---------------lMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~La  282 (411)
T KOG0599|consen  228 FWHR--KQM---------------LMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALA  282 (411)
T ss_pred             hhHH--HHH---------------HHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence            9531  000               112222233344445555677888999999999999999999999986

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.88  E-value=1e-22  Score=142.71  Aligned_cols=145  Identities=20%  Similarity=0.238  Sum_probs=90.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCC-ccccccccccccccCchhhhc-cCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQ-SMTQTQTLATIGYMAPVEYGR-EGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~-~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+|||++.++.+||+|||+++....... ........++..|+|||.+.. ...++.++|+||+||++|++++|+.||..
T Consensus       131 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~  210 (338)
T cd07859         131 PKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPG  210 (338)
T ss_pred             HHHeEECCCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCC
Confidence            6899999999999999999876422111 112234568999999965543 24578899999999999999999999964


Q ss_pred             cccCchhHHHHHHHhhhhhh------------HHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSV------------MEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIV  146 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl  146 (164)
                      ...  ......+........            ...+..................++.+.+++.+||+.||++|||+++++
T Consensus       211 ~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l  288 (338)
T cd07859         211 KNV--VHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEAL  288 (338)
T ss_pred             CCh--HHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHh
Confidence            321  111111111111111            111111100000011111123456688999999999999999999998


Q ss_pred             H
Q 039452          147 T  147 (164)
Q Consensus       147 ~  147 (164)
                      +
T Consensus       289 ~  289 (338)
T cd07859         289 A  289 (338)
T ss_pred             c
Confidence            6

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.88  E-value=1.2e-22  Score=138.28  Aligned_cols=131  Identities=18%  Similarity=0.341  Sum_probs=91.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||.++.+.............++..|++|| ......++.++|+||+|+++|++++ |..||...
T Consensus       141 p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe-~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~  219 (273)
T cd05035         141 ARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIE-SLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGV  219 (273)
T ss_pred             hheEEECCCCeEEECCccceeeccccccccccccccCCccccCHh-hcccCCCCcccchHHHHHHHHHHHhCCCCCCCCC
Confidence            689999999999999999998763322221122233466899995 4455668889999999999999998 88888643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI  152 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~  152 (164)
                      ....  ..            +.+....      ....+..++..+.+++.+||+.||++|||+.++++.|.++
T Consensus       220 ~~~~--~~------------~~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         220 ENHE--IY------------DYLRHGN------RLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             CHHH--HH------------HHHHcCC------CCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            2111  10            1111000      0111234456689999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.88  E-value=8.2e-23  Score=149.55  Aligned_cols=127  Identities=24%  Similarity=0.331  Sum_probs=90.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||+++.+.............|++.|+|||.+ ....++.++||||+||++|++++|..||....
T Consensus       171 P~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~-~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~  249 (496)
T PTZ00283        171 SANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIW-RRKPYSKKADMFSLGVLLYELLTLKRPFDGEN  249 (496)
T ss_pred             HHHEEEeCCCCEEEEecccCeeccccccccccccccCCcceeCHHHh-CCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence            68999999999999999999875322222223345689999999544 45668899999999999999999999996421


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTE  148 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  148 (164)
                      .     .            +.+........   ...+..+++.+.+++.+||+.||.+|||+.+++..
T Consensus       250 ~-----~------------~~~~~~~~~~~---~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~  297 (496)
T PTZ00283        250 M-----E------------EVMHKTLAGRY---DPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM  297 (496)
T ss_pred             H-----H------------HHHHHHhcCCC---CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence            1     0            11111111000   11233456678999999999999999999998763

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.88  E-value=9.9e-23  Score=145.86  Aligned_cols=140  Identities=21%  Similarity=0.304  Sum_probs=99.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhc--cCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGR--EGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~--~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      +.||++..++.|||+|||++..-..-..........|...|+|||.++-  ..+|++.+||||||++.|||++|..||..
T Consensus       516 SnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi  595 (678)
T KOG0193|consen  516 SNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSI  595 (678)
T ss_pred             ccceEEccCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCC
Confidence            4699999999999999999754211111112234567889999977753  34588999999999999999999999983


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHh
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL  156 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~  156 (164)
                      ...+...+.              +-.+.  ...........++.++.+|+..||.+++++||++.+|+..|+.+..++
T Consensus       596 ~~~dqIifm--------------VGrG~--l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~  657 (678)
T KOG0193|consen  596 QNRDQIIFM--------------VGRGY--LMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSL  657 (678)
T ss_pred             CChhheEEE--------------ecccc--cCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhcc
Confidence            222111110              00000  011222234567778999999999999999999999999999888765

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.88  E-value=1.4e-22  Score=146.58  Aligned_cols=142  Identities=23%  Similarity=0.254  Sum_probs=91.1

Q ss_pred             CcceEecCC-ceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDDN-MVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+|||++.+ +.+||+|||+++.+....   ......+++.|+|||.+.....++.++|+||+||++|+|++|..||...
T Consensus       198 p~NILl~~~~~~vkL~DFGla~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~  274 (440)
T PTZ00036        198 PQNLLIDPNTHTLKLCDFGSAKNLLAGQ---RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQ  274 (440)
T ss_pred             HHHEEEcCCCCceeeeccccchhccCCC---CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            689999865 479999999998653211   1223567899999976665556889999999999999999999999753


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhh---h-----c--ccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDA---N-----L--LTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~---~-----~--~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .... .+...+... .....+.+..   .     .  ..........+...+.++.+++.+||+.||.+|||+.+++.
T Consensus       275 ~~~~-~~~~i~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~  350 (440)
T PTZ00036        275 SSVD-QLVRIIQVL-GTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA  350 (440)
T ss_pred             ChHH-HHHHHHHHh-CCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence            3221 111111111 1110000000   0     0  00001111122234567999999999999999999999884

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.88  E-value=8.6e-23  Score=137.40  Aligned_cols=143  Identities=22%  Similarity=0.210  Sum_probs=98.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|+|++..|.+||+|||+||.+  +......+..+-|.+|+|||.++....++++.|+||+|||+.|++.+++.|.+. 
T Consensus       205 ~SNLLm~~~G~lKiaDFGLAR~y--gsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~-  281 (419)
T KOG0663|consen  205 TSNLLLSHKGILKIADFGLAREY--GSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGK-  281 (419)
T ss_pred             hhheeeccCCcEEecccchhhhh--cCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCC-
Confidence            68999999999999999999987  344444566778999999988888888999999999999999999999988743 


Q ss_pred             cCchhHHHHHHHhhhhhhHHHh---------hhhcccccchhhh--hHHH--HHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVV---------DANLLTREDRHFA--AKQQ--CVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~--~~~~--~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                       ++......+-...+.+...++         ........+....  .+..  ++....+++...|.+||.+|.|+++.++
T Consensus       282 -sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~  360 (419)
T KOG0663|consen  282 -SEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK  360 (419)
T ss_pred             -chHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence             222222222222222111111         1111111111111  1111  4477889999999999999999999876

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.88  E-value=1.2e-22  Score=140.61  Aligned_cols=144  Identities=21%  Similarity=0.224  Sum_probs=89.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||++.....  .........++..|+|||.+.....++.++|+||+||++|++++|..||....
T Consensus       131 p~Nill~~~~~~kl~Dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~  208 (303)
T cd07869         131 PQNLLISDTGELKLADFGLARAKSV--PSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMK  208 (303)
T ss_pred             HHHEEECCCCCEEECCCCcceeccC--CCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCc
Confidence            6899999999999999999875421  11122335678899999766555567888999999999999999999997543


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhh----hcccc------cchhhh---hHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDA----NLLTR------EDRHFA---AKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~------~~~~~~---~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .....+...... ...........    .....      ......   .....+..+.+++.+||+.||++|||++++++
T Consensus       209 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~  287 (303)
T cd07869         209 DIQDQLERIFLV-LGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS  287 (303)
T ss_pred             cHHHHHHHHHHH-hCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence            222111111110 00000000000    00000      000000   00112355789999999999999999999986

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.88  E-value=1.2e-22  Score=140.62  Aligned_cols=136  Identities=21%  Similarity=0.344  Sum_probs=88.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh--cCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT--RKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~--g~~p~~~   78 (164)
                      |+|||++.++.+||+|||+++.+.............++..|+|||.+ ....++.++|+||+|+++|++++  +..||..
T Consensus       166 p~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~  244 (304)
T cd05096         166 TRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECI-LMGKFTTASDVWAFGVTLWEILMLCKEQPYGE  244 (304)
T ss_pred             hhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHH-hcCCCCchhhhHHHHHHHHHHHHccCCCCCCc
Confidence            68999999999999999998765322222222333457789999554 45568889999999999999987  4566654


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELS  150 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~  150 (164)
                      .....  ......        .......   .......+..++..+.+++.+||+.||++|||+.+|.+.|+
T Consensus       245 ~~~~~--~~~~~~--------~~~~~~~---~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~  303 (304)
T cd05096         245 LTDEQ--VIENAG--------EFFRDQG---RQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT  303 (304)
T ss_pred             CCHHH--HHHHHH--------HHhhhcc---ccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence            32111  111000        0111000   00001112234566899999999999999999999988775

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.88  E-value=2e-22  Score=138.51  Aligned_cols=142  Identities=20%  Similarity=0.248  Sum_probs=90.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||.++.....   .......++..|+|||.+ ....++.++|+||+||++|++++|..||....
T Consensus       138 p~Nil~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~-~~~~~~~~~DiwslG~il~el~~g~~~f~~~~  213 (290)
T cd07862         138 PQNILVTSSGQIKLADFGLARIYSFQ---MALTSVVVTLWYRAPEVL-LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS  213 (290)
T ss_pred             HHHEEEcCCCCEEEccccceEeccCC---cccccccccccccChHHH-hCCCCCCccchHHHHHHHHHHHcCCCCcCCCC
Confidence            68999999999999999999765221   222345688999999555 45567889999999999999999999997532


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhh------hhccc-ccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVD------ANLLT-REDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .. ..+.............+.-.      ..... ...........++..+.+++.+||+.||++|||+.++++
T Consensus       214 ~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  286 (290)
T cd07862         214 DV-DQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  286 (290)
T ss_pred             HH-HHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence            21 11111111100000000000      00000 000001111234566889999999999999999999885

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.88  E-value=1.2e-22  Score=138.92  Aligned_cols=129  Identities=29%  Similarity=0.502  Sum_probs=90.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.++|+|||.++...............++..|+|||.+ ....++.++|+||+|+++|++++ |..||...
T Consensus       150 p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~  228 (280)
T cd05049         150 TRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESI-MYRKFTTESDVWSFGVVLWEIFTYGKQPWYGL  228 (280)
T ss_pred             cceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhh-ccCCcchhhhHHHHHHHHHHHHhcCCCCCCCC
Confidence            78999999999999999998764222211122334456789999544 45668889999999999999998 99998643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELS  150 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~  150 (164)
                      ....  .            .+.+......      ..+..++..+.+++.+||..||++|||+.++++.|+
T Consensus       229 ~~~~--~------------~~~~~~~~~~------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~  279 (280)
T cd05049         229 SNEE--V------------IECITQGRLL------QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ  279 (280)
T ss_pred             CHHH--H------------HHHHHcCCcC------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence            2111  0            0111111100      111234566899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.88  E-value=2.6e-22  Score=137.80  Aligned_cols=143  Identities=20%  Similarity=0.171  Sum_probs=90.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||++..+.... ........++..|+|||.+ ....++.++|+||+||++|++++|+.||....
T Consensus       128 p~Nill~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~-~~~~~~~~~DiwslGvil~el~~g~~pf~~~~  205 (287)
T cd07848         128 PENLLISHNDVLKLCDFGFARNLSEGS-NANYTEYVATRWYRSPELL-LGAPYGKAVDMWSVGCILGELSDGQPLFPGES  205 (287)
T ss_pred             HHHEEEcCCCcEEEeeccCcccccccc-cccccccccccccCCcHHH-cCCCCCCchhHHhHHHHHHHHHhCCCCCCCCC
Confidence            689999999999999999987652211 1122234688899999554 45557889999999999999999999997532


Q ss_pred             cCchhHHHHHHHhhhhhhHHHh----hhhc-----cc----ccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVV----DANL-----LT----REDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~----~~~~-----~~----~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .... ... +.........+..    ....     ..    ...........++..+.+++.+||+.||++|||++++++
T Consensus       206 ~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~  283 (287)
T cd07848         206 EIDQ-LFT-IQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN  283 (287)
T ss_pred             HHHH-HHH-HHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            2111 111 1111000000000    0000     00    000001111235667999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.88  E-value=2.7e-22  Score=142.56  Aligned_cols=131  Identities=21%  Similarity=0.373  Sum_probs=90.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+|||++.++.+||+|||+++.+.............++..|++||.+ ....++.++|+||||+++|++++ |..||...
T Consensus       242 p~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~  320 (375)
T cd05104         242 ARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESI-FNCVYTFESDVWSYGILLWEIFSLGSSPYPGM  320 (375)
T ss_pred             hhhEEEECCCcEEEecCccceeccCcccccccCCCCCCcceeChhHh-cCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCC
Confidence            78999999999999999998865322221112223345679999544 45668889999999999999997 88888643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSK  151 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~  151 (164)
                      .... ...            ..+.....      ...+...+.++.+++.+||+.||++|||+.++++.|++
T Consensus       321 ~~~~-~~~------------~~~~~~~~------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~  373 (375)
T cd05104         321 PVDS-KFY------------KMIKEGYR------MLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ  373 (375)
T ss_pred             CchH-HHH------------HHHHhCcc------CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence            2211 111            11111100      00112234568899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.87  E-value=9.5e-23  Score=143.53  Aligned_cols=123  Identities=24%  Similarity=0.319  Sum_probs=92.0

Q ss_pred             CcceEecCC-ceEEEeccccceeccCCCCccccccccccccccCchhhhccC-cccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDDN-MVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREG-RVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+|||++.+ +.+||+|||++..+.  ..........|++.|+|||.+.... ....++||||+|+++|.|+.|..||..
T Consensus       148 ~ENilld~~~~~~Kl~DFG~s~~~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d  225 (370)
T KOG0583|consen  148 PENILLDGNEGNLKLSDFGLSAISP--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDD  225 (370)
T ss_pred             HHHEEecCCCCCEEEeccccccccC--CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCC
Confidence            689999999 999999999998752  2333455678999999996665545 446889999999999999999999985


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHH-HHHHHHHHhhccccCccCCCCHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC-VSFVFNLAMECTIESPERRINAKEIV  146 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~cl~~~p~~Rps~~~vl  146 (164)
                      ...                 ..+..+.    .......|..+ +.++..++.+||..||.+|+|+.+++
T Consensus       226 ~~~-----------------~~l~~ki----~~~~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~  273 (370)
T KOG0583|consen  226 SNV-----------------PNLYRKI----RKGEFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEIL  273 (370)
T ss_pred             ccH-----------------HHHHHHH----hcCCccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence            211                 1111111    11112223333 66789999999999999999999998

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.87  E-value=9.5e-23  Score=137.80  Aligned_cols=144  Identities=24%  Similarity=0.208  Sum_probs=96.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||||+.+|.+||+|||+|+...  ......++.+.|.+|+|||.+.....++...||||+||++.||++++..|.+..
T Consensus       148 PQNlLi~~~G~lKlaDFGlAra~~--ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~s  225 (323)
T KOG0594|consen  148 PQNLLISSSGVLKLADFGLARAFS--IPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDS  225 (323)
T ss_pred             cceEEECCCCcEeeeccchHHHhc--CCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCc
Confidence            789999999999999999998652  223335677889999999888777789999999999999999999999987543


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhh----hcccccchhhh----hH---HHHHHHHHHHHhhccccCccCCCCHHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDA----NLLTREDRHFA----AK---QQCVSFVFNLAMECTIESPERRINAKEIVTE  148 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~----~~---~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  148 (164)
                      ..+  ....+-+..+.+..+....    ..+....+...    ..   ....+...+++.+||+++|.+|.|++..+..
T Consensus       226 e~~--ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h  302 (323)
T KOG0594|consen  226 EID--QLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH  302 (323)
T ss_pred             HHH--HHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence            311  1111112221111111110    01111111111    11   1122468899999999999999999988874

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.87  E-value=2.1e-22  Score=138.55  Aligned_cols=133  Identities=24%  Similarity=0.437  Sum_probs=93.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.++|+|||+++...............++..|++||.+ ....++.++|+||+|++++++++ |..||...
T Consensus       155 p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~-~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~  233 (290)
T cd05045         155 ARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESL-FDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI  233 (290)
T ss_pred             hheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHH-ccCCcchHhHHHHHHHHHHHHHhcCCCCCCCC
Confidence            78999999999999999998765322222112223346689999544 45567889999999999999998 88888643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRD  154 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~  154 (164)
                      ...  ..            .+.+....      ....+..++..+.+++..||+.+|++||+++++++.|+++..
T Consensus       234 ~~~--~~------------~~~~~~~~------~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~  288 (290)
T cd05045         234 APE--RL------------FNLLKTGY------RMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV  288 (290)
T ss_pred             CHH--HH------------HHHHhCCC------CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence            211  11            11111111      011123345568899999999999999999999999998865

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.87  E-value=1.4e-22  Score=138.62  Aligned_cols=134  Identities=20%  Similarity=0.334  Sum_probs=94.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||+++.+.............++..|++||.. ....++.++|+||+|+++|++++ |..||...
T Consensus       145 p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~-~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~  223 (280)
T cd05043         145 ARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESL-VNKEYSSASDVWSFGVLLWELMTLGQTPYVEI  223 (280)
T ss_pred             HhhEEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHH-hcCCCCchhhHHHhHHHHHHHhcCCCCCcCcC
Confidence            68999999999999999999865322221112223456789999544 45567889999999999999998 99998643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDS  155 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~  155 (164)
                      ..  .....            .+....      ....+..++..+.+++.+||+.+|++|||+.++++.|..+.++
T Consensus       224 ~~--~~~~~------------~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~  279 (280)
T cd05043         224 DP--FEMAA------------YLKDGY------RLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ  279 (280)
T ss_pred             CH--HHHHH------------HHHcCC------CCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence            11  11111            111110      0011123455689999999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.87  E-value=2.8e-22  Score=139.07  Aligned_cols=143  Identities=18%  Similarity=0.206  Sum_probs=91.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||+++....  .........++..|++||.+.....++.++|+||+|+++|++++|..||....
T Consensus       132 p~Nill~~~~~~kl~Dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~  209 (309)
T cd07872         132 PQNLLINERGELKLADFGLARAKSV--PTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGST  209 (309)
T ss_pred             HHHEEECCCCCEEECccccceecCC--CccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999876421  11122234578899999766655668889999999999999999999996532


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhh---------cccc--cchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDAN---------LLTR--EDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~--~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ... ....... .......+.....         ....  ..........++.++.+++.+||+.||.+|||++++++
T Consensus       210 ~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~  285 (309)
T cd07872         210 VED-ELHLIFR-LLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK  285 (309)
T ss_pred             hHH-HHHHHHH-HhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence            211 1111111 1110000000000         0000  00011122345667899999999999999999999987

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.87  E-value=1.7e-22  Score=137.61  Aligned_cols=131  Identities=21%  Similarity=0.336  Sum_probs=90.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+|||++.++.++|+|||+++.+.............++..|++|| ......++.++|+||+|+++|++++ |..||...
T Consensus       140 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe-~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~  218 (272)
T cd05075         140 ARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIE-SLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGV  218 (272)
T ss_pred             hhheEEcCCCCEEECCCCcccccCcccceecCCcccCCcccCCHH-HccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence            689999999999999999998753222111112234567899994 4445567889999999999999998 78888642


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI  152 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~  152 (164)
                      ..  ....            +.+.....      ...+..++..+.+++.+||..||++|||+.++++.|+++
T Consensus       219 ~~--~~~~------------~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         219 EN--SEIY------------DYLRQGNR------LKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             CH--HHHH------------HHHHcCCC------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            21  1111            11111000      001123455688999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.87  E-value=1.7e-22  Score=140.59  Aligned_cols=135  Identities=23%  Similarity=0.399  Sum_probs=93.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+|||++.++.+||+|||+++.+..............+..|++||.+ ....++.++|+||||+++|++++ |..||...
T Consensus       137 p~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~-~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~  215 (316)
T cd05108         137 ARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESI-LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI  215 (316)
T ss_pred             hhheEecCCCcEEEccccccccccCCCcceeccCCccceeecChHHh-ccCCCCchhhhHHHHHHHHHHHcCCCCCCCCC
Confidence            68999999999999999999876322221111222345679999544 45567889999999999999997 89998643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHh
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL  156 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~  156 (164)
                      ....  .            ...+....      ....+..++..+.+++.+||..+|++|||+.+++..+..+.+.-
T Consensus       216 ~~~~--~------------~~~~~~~~------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~  272 (316)
T cd05108         216 PASE--I------------SSILEKGE------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP  272 (316)
T ss_pred             CHHH--H------------HHHHhCCC------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence            1111  1            11111111      01112234456889999999999999999999999988887543

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.87  E-value=2.7e-22  Score=136.14  Aligned_cols=130  Identities=22%  Similarity=0.396  Sum_probs=90.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||.++....... ........+..|++|| .......+.++|+||+|+++|++++ |..||...
T Consensus       132 p~nil~~~~~~~kl~df~~~~~~~~~~~-~~~~~~~~~~~y~aPE-~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~  209 (263)
T cd05052         132 ARNCLVGENHLVKVADFGLSRLMTGDTY-TAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI  209 (263)
T ss_pred             cceEEEcCCCcEEeCCCcccccccccee-eccCCCCCccccCCHH-HhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCC
Confidence            7899999999999999999876532111 1111223356799995 4455667889999999999999998 88888642


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI  152 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~  152 (164)
                      ...  ...            ..+....      ....+..++..+.+++.+||+.+|++|||+.++++.|+++
T Consensus       210 ~~~--~~~------------~~~~~~~------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         210 DLS--QVY------------ELLEKGY------RMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             CHH--HHH------------HHHHCCC------CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence            111  000            0011100      0112234556799999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.87  E-value=1.9e-22  Score=138.86  Aligned_cols=132  Identities=27%  Similarity=0.447  Sum_probs=90.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||.++.+.............++..|++||.+ ....++.++|+|||||++|++++ |..||...
T Consensus       160 p~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~el~~~g~~p~~~~  238 (293)
T cd05053         160 ARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEAL-FDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI  238 (293)
T ss_pred             eeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHh-ccCCcCcccceeehhhHHHHHhcCCCCCCCCC
Confidence            68999999999999999998865322211112222345679999544 45567889999999999999997 88887642


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIR  153 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~  153 (164)
                      ....  ..            ..+.....      ...+..++..+.+++.+||..||++|||+.++++.|+.+.
T Consensus       239 ~~~~--~~------------~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~  292 (293)
T cd05053         239 PVEE--LF------------KLLKEGYR------MEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML  292 (293)
T ss_pred             CHHH--HH------------HHHHcCCc------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence            2111  00            11111100      0112234556889999999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.87  E-value=1.6e-22  Score=138.59  Aligned_cols=130  Identities=26%  Similarity=0.472  Sum_probs=90.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||+++.+.............+++.|++||.. ....++.++|+||+|+++|++++ |..||...
T Consensus       152 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~  230 (283)
T cd05091         152 TRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAI-MYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY  230 (283)
T ss_pred             hhheEecCCCceEecccccccccccchheeeccCccCCccccCHHHH-hcCCCCcchhHHHHHHHHHHHHcCCCCCCCCC
Confidence            68999999999999999998765322222222334456789999655 44557889999999999999998 77787642


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSK  151 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~  151 (164)
                      ...  ...            +.+.....      ...+..++..+.+++..||+.+|++||++.+++..|++
T Consensus       231 ~~~--~~~------------~~i~~~~~------~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         231 SNQ--DVI------------EMIRNRQV------LPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             CHH--HHH------------HHHHcCCc------CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence            111  110            11111100      11123456668899999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.87  E-value=4.3e-22  Score=137.29  Aligned_cols=135  Identities=17%  Similarity=0.222  Sum_probs=91.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc-----cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS-----MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKP   75 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p   75 (164)
                      |+|||++.++.++|+|||+++.+......     .......|++.|++| ++..+..++.++|+||+||+++++++|..|
T Consensus       154 p~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ap-e~~~~~~~~~~~DiwSlG~~l~el~~g~~P  232 (294)
T PHA02882        154 PENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGL-DAHNGACVTRRGDLESLGYCMLKWAGIKLP  232 (294)
T ss_pred             HHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCH-HHhCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence            68999999999999999999875321111     111224589999999 455566688999999999999999999999


Q ss_pred             CCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHH
Q 039452           76 TDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTEL  149 (164)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l  149 (164)
                      |................     ....+.....        ....++..+.+++..||..+|++||++.++++.+
T Consensus       233 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~  293 (294)
T PHA02882        233 WKGFGHNGNLIHAAKCD-----FIKRLHEGKI--------KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF  293 (294)
T ss_pred             CCccccchHHHHHhHHH-----HHHHhhhhhh--------ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence            97653222111110000     0000000000        1123356688999999999999999999998865

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.87  E-value=1.2e-22  Score=137.77  Aligned_cols=128  Identities=30%  Similarity=0.535  Sum_probs=85.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      ++||+++.++.+||+|||++....................|++| +......++.++||||||+++||+++ |..||...
T Consensus       131 ~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aP-E~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~  209 (259)
T PF07714_consen  131 PSNILLDSNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAP-EVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY  209 (259)
T ss_dssp             GGGEEEETTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-H-HHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccc
Confidence            47999999999999999999875222222222334567789999 45445558899999999999999999 67887643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTEL  149 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l  149 (164)
                      ..  ....            ..+.....      ...+..++..+.+++..||+.+|++|||+.++++.|
T Consensus       210 ~~--~~~~------------~~~~~~~~------~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  210 DN--EEII------------EKLKQGQR------LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             CH--HHHH------------HHHHTTEE------TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             cc--cccc------------cccccccc------ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence            11  1110            11111111      112234456688999999999999999999999876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.87  E-value=5.2e-23  Score=150.16  Aligned_cols=127  Identities=26%  Similarity=0.361  Sum_probs=99.2

Q ss_pred             cceEec-CCceEEEeccccceeccCCCCccccccccccccccCchhhhccCc-ccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            2 SNVLLD-DNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGR-VSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         2 ~Nill~-~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~-~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      .||||+ .+|.+||+|||.++.+-+.+  .......||..|||||.+-++.. +..++|||||||...||.+|++||-.+
T Consensus       704 DNVLvNTySGvlKISDFGTsKRLAgin--P~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~El  781 (1226)
T KOG4279|consen  704 DNVLVNTYSGVLKISDFGTSKRLAGIN--PCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVEL  781 (1226)
T ss_pred             CcEEEeeccceEEecccccchhhccCC--ccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeec
Confidence            589997 68999999999998763322  23456779999999977765544 889999999999999999999999754


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTE  148 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  148 (164)
                      .+..               ..+++-+   ....+.+.|..++.++.+++.+|+.++|.+||+++++++.
T Consensus       782 gspq---------------AAMFkVG---myKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~D  832 (1226)
T KOG4279|consen  782 GSPQ---------------AAMFKVG---MYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQD  832 (1226)
T ss_pred             CChh---------------Hhhhhhc---ceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence            3322               1222222   2345566778888999999999999999999999999874

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.87  E-value=6.4e-22  Score=135.66  Aligned_cols=146  Identities=20%  Similarity=0.309  Sum_probs=93.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc-cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS-MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+||+++.++.++|+|||+++.+...... .......++..|++|| .......+.++|+||+|++++++++|..|+...
T Consensus       135 p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE-~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~  213 (283)
T cd05080         135 ARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVE-CLKENKFSYASDVWSFGVTLYELLTHCDSKQSP  213 (283)
T ss_pred             hheEEEcCCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHh-HhcccCCCcccccHHHHHHHHHHHhCCCCCCCC
Confidence            68999999999999999998765321111 1112233556799995 444556788999999999999999999987542


Q ss_pred             ccCchhHHHHHH-HhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWIN-DLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIR  153 (164)
Q Consensus        80 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~  153 (164)
                      ............ ........+......      ....+..++..+.+++.+||+.+|++|||++++++.|+.+.
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~  282 (283)
T cd05080         214 PKKFEEMIGPKQGQMTVVRLIELLERGM------RLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH  282 (283)
T ss_pred             cchhhhhhcccccccchhhhhhhhhcCC------CCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence            211100000000 000001111111111      11112345567999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.87  E-value=5.6e-22  Score=139.40  Aligned_cols=140  Identities=21%  Similarity=0.202  Sum_probs=89.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||+++....     ......++..|+|||.+.....++.++|+||+||++|+|++|..||....
T Consensus       146 p~Nil~~~~~~~kl~Dfg~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  220 (343)
T cd07878         146 PSNVAVNEDCELRILDFGLARQADD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGND  220 (343)
T ss_pred             hhhEEECCCCCEEEcCCccceecCC-----CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCC
Confidence            6899999999999999999886521     12234688999999766555568889999999999999999999986422


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhc--------c----cccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANL--------L----TREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------~----~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .. ..+.... ...............        .    ..............+.+.+++.+||+.||.+|||++++++
T Consensus       221 ~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~  297 (343)
T cd07878         221 YI-DQLKRIM-EVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA  297 (343)
T ss_pred             HH-HHHHHHH-HHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            11 1111111 100011111110000        0    0000000001123445789999999999999999999986

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.87  E-value=3.3e-22  Score=145.98  Aligned_cols=126  Identities=21%  Similarity=0.259  Sum_probs=89.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||+++.+.............|++.|+||| +.....++.++|+||+||++|+|++|..||....
T Consensus       197 p~NIll~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE-~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~  275 (478)
T PTZ00267        197 SANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPE-LWERKRYSKKADMWSLGVILYELLTLHRPFKGPS  275 (478)
T ss_pred             HHhEEECCCCcEEEEeCcCceecCCccccccccccCCCccccCHh-HhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC
Confidence            689999999999999999998763322222233456899999995 4445668889999999999999999999986421


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ..                 +++.........   ..+..++..+.+++.+||..||++|||+++++.
T Consensus       276 ~~-----------------~~~~~~~~~~~~---~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~  322 (478)
T PTZ00267        276 QR-----------------EIMQQVLYGKYD---PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH  322 (478)
T ss_pred             HH-----------------HHHHHHHhCCCC---CCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence            10                 011111100000   112234566899999999999999999999865

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.87  E-value=4.9e-22  Score=140.51  Aligned_cols=142  Identities=19%  Similarity=0.205  Sum_probs=89.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||+++....   ........++..|+|||.+ .+..++.++|+||+||++|+|++|..||....
T Consensus       151 p~NIl~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~t~~y~aPE~~-~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~  226 (359)
T cd07876         151 PSNIVVKSDCTLKILDFGLARTACT---NFMMTPYVVTRYYRAPEVI-LGMGYKENVDIWSVGCIMGELVKGSVIFQGTD  226 (359)
T ss_pred             HHHEEECCCCCEEEecCCCcccccc---CccCCCCcccCCCCCchhc-cCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999875421   1122345678899999554 45668889999999999999999999997432


Q ss_pred             cCchhHHHHHHHhhhhh-----------hHHHhhhhc-ccccc-----------hhhhhHHHHHHHHHHHHhhccccCcc
Q 039452           81 SGEMTLKRWINDLLSVS-----------VMEVVDANL-LTRED-----------RHFAAKQQCVSFVFNLAMECTIESPE  137 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~-----------~~~~~~~~~-~~~~~-----------~~~~~~~~~~~~~~~l~~~cl~~~p~  137 (164)
                      .. ......... ....           ......... .....           .........+..+.+++.+||..||+
T Consensus       227 ~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~  304 (359)
T cd07876         227 HI-DQWNKVIEQ-LGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPD  304 (359)
T ss_pred             HH-HHHHHHHHh-cCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcc
Confidence            11 111111110 0000           000100000 00000           00001112345688999999999999


Q ss_pred             CCCCHHHHHHH
Q 039452          138 RRINAKEIVTE  148 (164)
Q Consensus       138 ~Rps~~~vl~~  148 (164)
                      +|||+++++..
T Consensus       305 ~R~t~~e~l~h  315 (359)
T cd07876         305 KRISVDEALRH  315 (359)
T ss_pred             cCCCHHHHhcC
Confidence            99999999873

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.87  E-value=4.7e-22  Score=148.29  Aligned_cols=133  Identities=29%  Similarity=0.447  Sum_probs=97.1

Q ss_pred             cceEecCCceEEEeccccceeccCCCCcccc-ccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQ-TQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         2 ~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      .|||+..+..+||+|||+++...+...+... +...-+..|+|| +.+....++.++||||||+++||+++ |..||.+.
T Consensus       447 RNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmAp-Esl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~  525 (609)
T KOG0200|consen  447 RNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAP-ESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGI  525 (609)
T ss_pred             hhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCH-HHhccCcccccchhhHHHHHHHHHhhCCCCCCCCC
Confidence            5999999999999999999865333333211 111145679999 55555889999999999999999997 77888652


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRD  154 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~  154 (164)
                      .....             +.+.+      ....+...|..|+.+++++|+.||+.+|++||++.++.+.+.....
T Consensus       526 ~~~~~-------------l~~~l------~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~  581 (609)
T KOG0200|consen  526 PPTEE-------------LLEFL------KEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQ  581 (609)
T ss_pred             CcHHH-------------HHHHH------hcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHH
Confidence            21111             11111      1223344567778889999999999999999999999999999654

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.87  E-value=7.2e-22  Score=134.24  Aligned_cols=133  Identities=17%  Similarity=0.269  Sum_probs=92.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.+..+..  .........++..|++||.. ....++.++|+||+|+++|++++|..||....
T Consensus       134 ~~nil~~~~~~~~l~d~g~~~~~~~--~~~~~~~~~~~~~~~aPE~~-~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~  210 (267)
T cd08228         134 PANVFITATGVVKLGDLGLGRFFSS--KTTAAHSLVGTPYYMSPERI-HENGYNFKSDIWSLGCLLYEMAALQSPFYGDK  210 (267)
T ss_pred             HHHEEEcCCCCEEECccccceeccc--hhHHHhcCCCCccccChhhh-ccCCCCchhhHHHHHHHHHHHhcCCCCCcccc
Confidence            6899999999999999999876521  11112234577889999544 45567889999999999999999999986432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIR  153 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~  153 (164)
                      .......   .         .+....     .........+..+.+++.+||..+|++|||+.++++.+.++.
T Consensus       211 ~~~~~~~---~---------~~~~~~-----~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~  266 (267)
T cd08228         211 MNLFSLC---Q---------KIEQCD-----YPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH  266 (267)
T ss_pred             ccHHHHH---H---------HHhcCC-----CCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence            2111111   0         011000     000111234556889999999999999999999999998763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.87  E-value=3.2e-22  Score=135.32  Aligned_cols=132  Identities=25%  Similarity=0.417  Sum_probs=91.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCcc-ccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSM-TQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~   78 (164)
                      |+||+++.++.+||+|||.++.+....... ......++..|++||.. ....++.++|+||+|+++|++++ |..||..
T Consensus       123 p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~  201 (257)
T cd05060         123 ARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECI-NYGKFSSKSDVWSYGVTLWEAFSYGAKPYGE  201 (257)
T ss_pred             cceEEEcCCCcEEeccccccceeecCCcccccccCccccccccCHHHh-cCCCCCccchHHHHHHHHHHHHcCCCCCccc
Confidence            689999999999999999987653222111 11112234579999544 55568889999999999999997 8999864


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIR  153 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~  153 (164)
                      ...  ......            +....      ....+..++..+.+++.+||..+|++|||+.++++.|+.+.
T Consensus       202 ~~~--~~~~~~------------~~~~~------~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~  256 (257)
T cd05060         202 MKG--AEVIAM------------LESGE------RLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP  256 (257)
T ss_pred             CCH--HHHHHH------------HHcCC------cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence            321  111111            11100      01122334566889999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.87  E-value=2.6e-22  Score=137.44  Aligned_cols=129  Identities=25%  Similarity=0.447  Sum_probs=89.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.++|+|||++..+.............++..|++|| ......++.++|+|||||++|++++ |..||...
T Consensus       150 p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~  228 (280)
T cd05092         150 TRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPE-SILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQL  228 (280)
T ss_pred             HhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHH-HhccCCcCchhhHHHHHHHHHHHHcCCCCCCccC
Confidence            689999999999999999987653222212222334567899995 4445567889999999999999998 88888542


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELS  150 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~  150 (164)
                      ....  ..            .......      ....+..+++.+.+++.+||+.||.+||++.++.+.|.
T Consensus       229 ~~~~--~~------------~~~~~~~------~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~  279 (280)
T cd05092         229 SNTE--AI------------ECITQGR------ELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ  279 (280)
T ss_pred             CHHH--HH------------HHHHcCc------cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence            2111  00            0000000      01112234566889999999999999999999998775

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.87  E-value=5.1e-22  Score=137.45  Aligned_cols=134  Identities=25%  Similarity=0.410  Sum_probs=93.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||.++.+.............++..|+|||.+ ....++.++|+||+|+++|++++ |..||...
T Consensus       165 p~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~  243 (304)
T cd05101         165 ARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEAL-FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI  243 (304)
T ss_pred             cceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhh-ccCCCCchhhHHHHHHHHHHHHcCCCCCcccC
Confidence            78999999999999999999875322222122223456789999544 45567889999999999999998 77777532


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDS  155 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~  155 (164)
                      ....  ..            ..+....      ....+..++..+.+++.+||+.+|.+|||+.++++.|.++...
T Consensus       244 ~~~~--~~------------~~~~~~~------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~  299 (304)
T cd05101         244 PVEE--LF------------KLLKEGH------RMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL  299 (304)
T ss_pred             CHHH--HH------------HHHHcCC------cCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence            1111  00            1111100      0111234556689999999999999999999999999888754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.87  E-value=1.3e-21  Score=133.88  Aligned_cols=135  Identities=23%  Similarity=0.371  Sum_probs=93.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+|||++.++.+||+|||+++.+.............++..|++||.. ....++.++|+|||||++|++++ |..||...
T Consensus       137 p~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~-~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~  215 (279)
T cd05109         137 ARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESI-LHRRFTHQSDVWSYGVTVWELMTFGAKPYDGI  215 (279)
T ss_pred             cceEEEcCCCcEEECCCCceeecccccceeecCCCccchhhCCHHHh-ccCCCCchhHHHHHHHHHHHHHcCCCCCCCCC
Confidence            78999999999999999999876322211111222345679999554 45567889999999999999998 88888642


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHh
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL  156 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~  156 (164)
                      ..  ..            ....+......      ..+..++..+.+++.+||..||++||++.++++.|..+....
T Consensus       216 ~~--~~------------~~~~~~~~~~~------~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~  272 (279)
T cd05109         216 PA--RE------------IPDLLEKGERL------PQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP  272 (279)
T ss_pred             CH--HH------------HHHHHHCCCcC------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence            11  11            11111111110      111234556889999999999999999999999988876544

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.87  E-value=5.6e-22  Score=136.86  Aligned_cols=134  Identities=24%  Similarity=0.356  Sum_probs=92.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+|||++.++.+||+|||++....   ..........+..|++|| ......++.++|+||+|+++|+|++ |..||...
T Consensus       147 p~Nill~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~y~aPE-~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~  222 (297)
T cd05089         147 ARNVLVGENLASKIADFGLSRGEE---VYVKKTMGRLPVRWMAIE-SLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGM  222 (297)
T ss_pred             cceEEECCCCeEEECCcCCCcccc---ceeccCCCCcCccccCch-hhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCC
Confidence            789999999999999999986421   111111122345799995 4445567889999999999999997 99998643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhhc
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFR  158 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~~  158 (164)
                      ....  .   .         ..+....      ....+..++..+.+++.+||+.+|.+|||++++++.|..+.+....
T Consensus       223 ~~~~--~---~---------~~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~~  281 (297)
T cd05089         223 TCAE--L---Y---------EKLPQGY------RMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARKA  281 (297)
T ss_pred             CHHH--H---H---------HHHhcCC------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence            2111  0   0         0000000      0111223456689999999999999999999999999998876543

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.87  E-value=5.6e-22  Score=140.44  Aligned_cols=141  Identities=18%  Similarity=0.174  Sum_probs=88.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||+++...   .........++..|+|||.+ .+..++.++|+||+||++|+|++|..||....
T Consensus       154 p~NIll~~~~~~kL~DfG~a~~~~---~~~~~~~~~~t~~y~aPE~~-~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~  229 (364)
T cd07875         154 PSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI-LGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD  229 (364)
T ss_pred             HHHEEECCCCcEEEEeCCCccccC---CCCcccCCcccCCcCCHHHH-hCCCCCchhhHHhHHHHHHHHHhCCCCCCCCC
Confidence            689999999999999999997642   11222345688999999544 55668889999999999999999999996432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhh------------cccccc-----------hhhhhHHHHHHHHHHHHhhccccCcc
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDAN------------LLTRED-----------RHFAAKQQCVSFVFNLAMECTIESPE  137 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~-----------~~~~~~~~~~~~~~~l~~~cl~~~p~  137 (164)
                      ... .....+.. ......+.....            ......           ............+.+++.+||+.||.
T Consensus       230 ~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~  307 (364)
T cd07875         230 HID-QWNKVIEQ-LGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDAS  307 (364)
T ss_pred             HHH-HHHHHHHh-cCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcc
Confidence            111 11111110 000000100000            000000           00000111234578999999999999


Q ss_pred             CCCCHHHHHH
Q 039452          138 RRINAKEIVT  147 (164)
Q Consensus       138 ~Rps~~~vl~  147 (164)
                      +|||+.++++
T Consensus       308 ~R~t~~e~L~  317 (364)
T cd07875         308 KRISVDEALQ  317 (364)
T ss_pred             cCCCHHHHhc
Confidence            9999999987

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.87  E-value=5.2e-22  Score=141.90  Aligned_cols=134  Identities=22%  Similarity=0.414  Sum_probs=94.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+|||++.++.+||+|||+++...............++..|++||.+ ....++.++||||||+++|++++ |..||...
T Consensus       265 p~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~  343 (400)
T cd05105         265 ARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESI-FDNLYTTLSDVWSYGILLWEIFSLGGTPYPGM  343 (400)
T ss_pred             hHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhh-cCCCCCchhhHHHHHHHHHHHHHCCCCCCccc
Confidence            68999999999999999998765322222222334567789999544 45567889999999999999997 88888643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRD  154 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~  154 (164)
                      .......             ..+....      ....+..++..+.+++.+||+.+|++|||+.+|.+.|.++.+
T Consensus       344 ~~~~~~~-------------~~~~~~~------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~  399 (400)
T cd05105         344 IVDSTFY-------------NKIKSGY------RMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP  399 (400)
T ss_pred             chhHHHH-------------HHHhcCC------CCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence            2211100             0111100      111223456678999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.87  E-value=2.7e-22  Score=137.12  Aligned_cols=129  Identities=23%  Similarity=0.441  Sum_probs=87.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.++|+|||+++...............++..|+|||.+ ....++.++|+||+|+++|++++ |..||...
T Consensus       147 p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~  225 (277)
T cd05062         147 ARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL-KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGM  225 (277)
T ss_pred             hheEEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHh-hcCCcCchhHHHHHHHHHHHHHcCCCCCCCCC
Confidence            78999999999999999998754221111111223446789999544 45668889999999999999998 67887643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELS  150 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~  150 (164)
                      ....  ..            ........      ...+..++..+.+++.+||+.+|++|||+.++++.|+
T Consensus       226 ~~~~--~~------------~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  276 (277)
T cd05062         226 SNEQ--VL------------RFVMEGGL------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK  276 (277)
T ss_pred             CHHH--HH------------HHHHcCCc------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence            2111  00            00000000      0012234556899999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.87  E-value=6.1e-22  Score=140.63  Aligned_cols=144  Identities=22%  Similarity=0.289  Sum_probs=91.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||+++...... ........++..|+|||.+.....++.++|+||+||++|+|++|+.||....
T Consensus       131 p~Nili~~~~~~kL~Dfg~a~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  209 (372)
T cd07853         131 PGNLLVNSNCVLKICDFGLARVEEPDE-SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQS  209 (372)
T ss_pred             hHHEEECCCCCEEeccccceeecccCc-cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCC
Confidence            689999999999999999987642111 1122334578899999766555557889999999999999999999997532


Q ss_pred             cCchhHHHHHHHhhhhhhH-----------HHhhhhcccccch--hhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVM-----------EVVDANLLTREDR--HFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ...  ....+.........           ..+..........  ........++.+.+++.+||+.||.+|||+++++.
T Consensus       210 ~~~--~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  287 (372)
T cd07853         210 PIQ--QLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALA  287 (372)
T ss_pred             HHH--HHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence            211  11111111111000           0000000000000  00111223566889999999999999999999986

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.87  E-value=1e-21  Score=138.66  Aligned_cols=143  Identities=20%  Similarity=0.206  Sum_probs=89.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||+++...   .........++..|+|||.+ .+..++.++|+||+||++|+|++|..||....
T Consensus       147 p~Nill~~~~~~kl~Dfg~~~~~~---~~~~~~~~~~t~~y~aPE~~-~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  222 (355)
T cd07874         147 PSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI-LGMGYKENVDIWSVGCIMGEMVRHKILFPGRD  222 (355)
T ss_pred             hHHEEECCCCCEEEeeCcccccCC---CccccCCccccCCccCHHHH-cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            689999999999999999997642   11222345688999999554 45568889999999999999999999997432


Q ss_pred             cCchhHHHHHHHhhh----------hhhHHHhhhhc-cc---------cc--chhhhhHHHHHHHHHHHHhhccccCccC
Q 039452           81 SGEMTLKRWINDLLS----------VSVMEVVDANL-LT---------RE--DRHFAAKQQCVSFVFNLAMECTIESPER  138 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~----------~~~~~~~~~~~-~~---------~~--~~~~~~~~~~~~~~~~l~~~cl~~~p~~  138 (164)
                      ... .....+.....          ........... ..         ..  .............+.+++.+||+.||++
T Consensus       223 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~  301 (355)
T cd07874         223 YID-QWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK  301 (355)
T ss_pred             HHH-HHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchh
Confidence            111 11111111000          00000100000 00         00  0000011123456789999999999999


Q ss_pred             CCCHHHHHHH
Q 039452          139 RINAKEIVTE  148 (164)
Q Consensus       139 Rps~~~vl~~  148 (164)
                      |||+.++++.
T Consensus       302 Rps~~ell~h  311 (355)
T cd07874         302 RISVDEALQH  311 (355)
T ss_pred             cCCHHHHhcC
Confidence            9999999874

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.86  E-value=8.4e-22  Score=137.00  Aligned_cols=137  Identities=25%  Similarity=0.400  Sum_probs=94.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||.++.+.............++..|++||.+ ....++.++|+||+|+++|++++ |..||...
T Consensus       162 p~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~  240 (314)
T cd05099         162 ARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEAL-FDRVYTHQSDVWSFGILMWEIFTLGGSPYPGI  240 (314)
T ss_pred             ceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHH-ccCCcCccchhhHHHHHHHHHHhCCCCCCCCC
Confidence            68999999999999999999765221111111122344679999554 45567889999999999999998 88888542


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhhc
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFR  158 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~~  158 (164)
                      ....  ..            ..+....      ....+..++..+.+++.+||..+|++|||+.++++.|..+......
T Consensus       241 ~~~~--~~------------~~~~~~~------~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~~  299 (314)
T cd05099         241 PVEE--LF------------KLLREGH------RMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAVSE  299 (314)
T ss_pred             CHHH--HH------------HHHHcCC------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHhcC
Confidence            1111  10            1111110      0111233455688999999999999999999999999999876543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.86  E-value=8.4e-22  Score=135.06  Aligned_cols=145  Identities=23%  Similarity=0.168  Sum_probs=89.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.++.+..  .........++..|++||.+.....++.++|+||+|+++|+|++|..|+....
T Consensus       127 ~~nil~~~~~~~~l~dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~  204 (284)
T cd07839         127 PQNLLINKNGELKLADFGLARAFGI--PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN  204 (284)
T ss_pred             HHHEEEcCCCcEEECccchhhccCC--CCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCC
Confidence            6799999999999999999876421  11122334567889999766555557889999999999999999988864322


Q ss_pred             cCchhHHHHHHHhhh---hhhHHHh---hhhcccccc---hhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLS---VSVMEVV---DANLLTRED---RHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~---~~~~~~~---~~~~~~~~~---~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .....+.........   .......   +........   ........++..+.+++.+||+.||.+|||+++++.
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~  280 (284)
T cd07839         205 DVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ  280 (284)
T ss_pred             CHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence            222111111110000   0000000   000000000   001112245677899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.86  E-value=5.1e-22  Score=134.38  Aligned_cols=131  Identities=24%  Similarity=0.391  Sum_probs=91.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc-cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS-MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~   78 (164)
                      |.||+++.++.+||+|||.++.+...... .......++..|++||.+ .....+.++|+||+|+++|++++ |..||..
T Consensus       123 p~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~~l~el~t~g~~p~~~  201 (257)
T cd05116         123 ARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECM-NYYKFSSKSDVWSFGVLMWEAFSYGQKPYKG  201 (257)
T ss_pred             hhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHh-ccCCcCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence            68999999999999999998765322111 111222345789999544 45567889999999999999997 8999864


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI  152 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~  152 (164)
                      ....  ..            ...++....      ...+..++..+.+++.+||+.||++||++.+|.+.|.+.
T Consensus       202 ~~~~--~~------------~~~i~~~~~------~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~  255 (257)
T cd05116         202 MKGN--EV------------TQMIESGER------MECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY  255 (257)
T ss_pred             CCHH--HH------------HHHHHCCCC------CCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence            3211  11            111111110      112234566789999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.86  E-value=4.7e-22  Score=134.79  Aligned_cols=130  Identities=22%  Similarity=0.422  Sum_probs=90.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.++|+|||.+..+..... .......++..|++||. .....++.++|+||+|+++|++++ |..||...
T Consensus       131 p~nili~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~  208 (261)
T cd05072         131 AANVLVSESLMCKIADFGLARVIEDNEY-TAREGAKFPIKWTAPEA-INFGSFTIKSDVWSFGILLYEIVTYGKIPYPGM  208 (261)
T ss_pred             hhhEEecCCCcEEECCCccceecCCCce-eccCCCccceecCCHHH-hccCCCChhhhhhhhHHHHHHHHccCCCCCCCC
Confidence            6899999999999999999987532111 11122345678999954 445567888999999999999998 88998643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI  152 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~  152 (164)
                      ....  ...            .+....      .......++..+.+++.+||..+|++|||++++.+.|+++
T Consensus       209 ~~~~--~~~------------~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  261 (261)
T cd05072         209 SNSD--VMS------------ALQRGY------RMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF  261 (261)
T ss_pred             CHHH--HHH------------HHHcCC------CCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence            2111  110            000000      0111123455688999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.86  E-value=6.9e-22  Score=138.36  Aligned_cols=139  Identities=22%  Similarity=0.342  Sum_probs=89.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.++|+|||++..+...    ......++..|+|||.+ .+..++.++|+||+||++|++++|..||....
T Consensus       132 p~Nil~~~~~~~kl~Dfg~~~~~~~~----~~~~~~g~~~y~aPE~~-~~~~~~~~~DiwslG~il~el~tg~~p~~~~~  206 (331)
T cd06649         132 PSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERL-QGTHYSVQSDIWSMGLSLVELAIGRYPIPPPD  206 (331)
T ss_pred             hhhEEEcCCCcEEEccCccccccccc----ccccCCCCcCcCCHhHh-cCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence            68999999999999999998764211    12334688999999544 45568889999999999999999999996422


Q ss_pred             cCchhHHHHHHHhhh-------------------------------hhhHHHhhhhcccccchhhhhHHHHHHHHHHHHh
Q 039452           81 SGEMTLKRWINDLLS-------------------------------VSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAM  129 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  129 (164)
                      ...  +.........                               ....+..+......  .........+.++.+++.
T Consensus       207 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~  282 (331)
T cd06649         207 AKE--LEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEP--PPKLPNGVFTPDFQEFVN  282 (331)
T ss_pred             HHH--HHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCC--CcCCCCccccHHHHHHHH
Confidence            111  1111100000                               00000000000000  000001134567899999


Q ss_pred             hccccCccCCCCHHHHHHH
Q 039452          130 ECTIESPERRINAKEIVTE  148 (164)
Q Consensus       130 ~cl~~~p~~Rps~~~vl~~  148 (164)
                      +||+.||++|||++++++.
T Consensus       283 ~~L~~~P~~Rpt~~ell~h  301 (331)
T cd06649         283 KCLIKNPAERADLKMLMNH  301 (331)
T ss_pred             HHccCCcccCCCHHHHhcC
Confidence            9999999999999999874

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.86  E-value=2.5e-21  Score=134.67  Aligned_cols=78  Identities=19%  Similarity=0.284  Sum_probs=60.2

Q ss_pred             CcceEe----cCCceEEEeccccceeccCCCCc-cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCC
Q 039452            1 PSNVLL----DDNMVAHLSDFGIAKLLIGEDQS-MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKP   75 (164)
Q Consensus         1 p~Nill----~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p   75 (164)
                      |+|||+    +.++.+||+|||+++.+...... .......+++.|+|||.+.....++.++|+||+||++|++++|..|
T Consensus       136 p~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~  215 (317)
T cd07868         136 PANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPI  215 (317)
T ss_pred             HHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCC
Confidence            689999    45678999999999875322111 1223456789999997666555688899999999999999999999


Q ss_pred             CCc
Q 039452           76 TDE   78 (164)
Q Consensus        76 ~~~   78 (164)
                      |..
T Consensus       216 f~~  218 (317)
T cd07868         216 FHC  218 (317)
T ss_pred             ccC
Confidence            964

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.86  E-value=3.7e-22  Score=137.06  Aligned_cols=126  Identities=20%  Similarity=0.281  Sum_probs=87.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.++|+|||++..+....   ......|+..|+|||.+ ....++.++|+||+||++|++++|..||....
T Consensus       130 p~Nill~~~~~~kl~Dfg~~~~~~~~~---~~~~~~g~~~y~aPE~~-~~~~~~~~~DvwslGvil~el~~g~~pf~~~~  205 (285)
T cd05631         130 PENILLDDRGHIRISDLGLAVQIPEGE---TVRGRVGTVGYMAPEVI-NNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRK  205 (285)
T ss_pred             HHHEEECCCCCEEEeeCCCcEEcCCCC---eecCCCCCCCccCHhhh-cCCCCCcccCchhHHHHHHHHHhCCCCCCCCC
Confidence            689999999999999999987652111   12344689999999544 45668889999999999999999999997532


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCC-----HHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRIN-----AKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~vl~  147 (164)
                      .... ....         ...+..       .....+...+..+.+++.+||+.||.+||+     ++++++
T Consensus       206 ~~~~-~~~~---------~~~~~~-------~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~  260 (285)
T cd05631         206 ERVK-REEV---------DRRVKE-------DQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ  260 (285)
T ss_pred             cchh-HHHH---------HHHhhc-------ccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence            2110 0000         000000       001112234556889999999999999997     778776

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.86  E-value=8.5e-22  Score=133.55  Aligned_cols=133  Identities=22%  Similarity=0.418  Sum_probs=89.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc--cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhc-CCCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS--MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTR-KKPTD   77 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g-~~p~~   77 (164)
                      |+|||++.++.+||+|||+++.+......  .......++..|++||.. ....++.++|+||||+++|++++| ..||.
T Consensus       126 ~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~~l~el~~~~~~~~~  204 (262)
T cd05058         126 ARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAPPYP  204 (262)
T ss_pred             cceEEEcCCCcEEECCccccccccCCcceeecccccCcCCccccChhHh-ccCccchHHHHHHHHHHHHHHHcCCCCCCC
Confidence            68999999999999999998765221110  111223456789999544 455688899999999999999995 55554


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHH
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRD  154 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~  154 (164)
                      ...  .....            ..+....      ....+..++..+.+++.+||..+|++||++.+++..|.++..
T Consensus       205 ~~~--~~~~~------------~~~~~~~------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~  261 (262)
T cd05058         205 DVD--SFDIT------------VYLLQGR------RLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS  261 (262)
T ss_pred             CCC--HHHHH------------HHHhcCC------CCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence            321  11110            0010000      001112234568899999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.86  E-value=1.3e-21  Score=132.91  Aligned_cols=133  Identities=17%  Similarity=0.242  Sum_probs=92.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++++|||.+..+...  ........++..|++|| ......++.++|+||+|+++|++++|..||....
T Consensus       134 p~nili~~~~~~~l~dfg~~~~~~~~--~~~~~~~~~~~~~~ape-~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~  210 (267)
T cd08229         134 PANVFITATGVVKLGDLGLGRFFSSK--TTAAHSLVGTPYYMSPE-RIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK  210 (267)
T ss_pred             HHHEEEcCCCCEEECcchhhhccccC--CcccccccCCcCccCHH-HhcCCCccchhhHHHHHHHHHHHHhCCCCccccc
Confidence            68999999999999999998765221  11122345788999995 4445567788999999999999999999986422


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIR  153 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~  153 (164)
                      ...   ....         ..+.....     ........+..+.+++.+||..+|.+|||+.+|++.+.++.
T Consensus       211 ~~~---~~~~---------~~~~~~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~  266 (267)
T cd08229         211 MNL---YSLC---------KKIEQCDY-----PPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH  266 (267)
T ss_pred             chH---HHHh---------hhhhcCCC-----CCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence            111   1000         00000000     00011234566899999999999999999999999988764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.86  E-value=7.6e-22  Score=133.71  Aligned_cols=129  Identities=29%  Similarity=0.530  Sum_probs=90.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||.+..+..  .........++..|++||.. ....++.++|+||+|++++++++ |..||...
T Consensus       132 ~~nilv~~~~~~kl~d~g~~~~~~~--~~~~~~~~~~~~~~~~PE~~-~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~  208 (261)
T cd05148         132 ARNILVGEDLVCKVADFGLARLIKE--DVYLSSDKKIPYKWTAPEAA-SHGTFSTKSDVWSFGILLYEMFTYGQVPYPGM  208 (261)
T ss_pred             cceEEEcCCceEEEccccchhhcCC--ccccccCCCCceEecCHHHH-ccCCCCchhhHHHHHHHHHHHHcCCCCCCCcC
Confidence            6899999999999999999876522  11112233456789999544 45567889999999999999998 88898643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI  152 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~  152 (164)
                      ..... +             ......      .....+..++..+.+++.+||+.||++|||++++++.|+.+
T Consensus       209 ~~~~~-~-------------~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~  261 (261)
T cd05148         209 NNHEV-Y-------------DQITAG------YRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI  261 (261)
T ss_pred             CHHHH-H-------------HHHHhC------CcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence            21110 0             000000      00111234456688999999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.86  E-value=2.7e-21  Score=131.32  Aligned_cols=133  Identities=18%  Similarity=0.297  Sum_probs=92.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.++.+..  .........++..|.+||.. ....++.++|+||+|+++|++++|..||....
T Consensus       134 p~nil~~~~~~~~l~d~~~~~~~~~--~~~~~~~~~~~~~y~apE~~-~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  210 (267)
T cd08224         134 PANVFITATGVVKLGDLGLGRFFSS--KTTAAHSLVGTPYYMSPERI-HENGYNFKSDIWSLGCLLYEMAALQSPFYGDK  210 (267)
T ss_pred             hhhEEECCCCcEEEeccceeeeccC--CCcccceecCCccccCHHHh-ccCCCCchhcHHHHHHHHHHHHHCCCCcccCC
Confidence            6899999999999999999876522  11122334577889999544 45667889999999999999999999986432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIR  153 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~  153 (164)
                      ..   ......         .+.......     ......+..+.+++.+||..+|++|||+.++++.|.++.
T Consensus       211 ~~---~~~~~~---------~~~~~~~~~-----~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~  266 (267)
T cd08224         211 MN---LYSLCK---------KIEKCDYPP-----LPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH  266 (267)
T ss_pred             cc---HHHHHh---------hhhcCCCCC-----CChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence            11   111000         000000000     001134556889999999999999999999999998875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.86  E-value=4.6e-22  Score=140.37  Aligned_cols=128  Identities=20%  Similarity=0.364  Sum_probs=87.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhc----cCcccCccchHhHHHHHHHHHhcCCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGR----EGRVSTNGDVYSFGIMLMEAFTRKKPT   76 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~----~~~~~~~~Di~s~g~~~~~~~~g~~p~   76 (164)
                      |+|||++.++.+||+|||+++.+..  .........|+..|++||.+..    +...+.++|||||||++|++++|..||
T Consensus       196 p~NIll~~~~~~kL~DfG~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf  273 (353)
T PLN00034        196 PSNLLINSAKNVKIADFGVSRILAQ--TMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPF  273 (353)
T ss_pred             HHHEEEcCCCCEEEcccccceeccc--ccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCC
Confidence            5799999999999999999887521  1112234568999999965532    223446899999999999999999999


Q ss_pred             CccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           77 DEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .......  ...            ........   .....+..++..+.+++.+||+.||++|||++++++
T Consensus       274 ~~~~~~~--~~~------------~~~~~~~~---~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~  327 (353)
T PLN00034        274 GVGRQGD--WAS------------LMCAICMS---QPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQ  327 (353)
T ss_pred             CCCCCcc--HHH------------HHHHHhcc---CCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            6321111  110            00000000   001112344566899999999999999999999987

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.86  E-value=1.3e-21  Score=134.95  Aligned_cols=136  Identities=21%  Similarity=0.344  Sum_probs=88.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh--cCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT--RKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~--g~~p~~~   78 (164)
                      |+||+++.++.++|+|||.++.+.............++..|++||.. ....++.++|+||+||++|++++  |..||..
T Consensus       158 p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~-~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~  236 (296)
T cd05095         158 TRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESI-LLGKFTTASDVWAFGVTLWEILTLCKEQPYSQ  236 (296)
T ss_pred             hheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHH-hcCCccchhhhhHHHHHHHHHHHhCCCCCccc
Confidence            78999999999999999998765322211112223346789999654 44568889999999999999998  6677754


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELS  150 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~  150 (164)
                      ......  ...        ..........   ......+..++..+.+++.+||+.||++|||+.++.+.|.
T Consensus       237 ~~~~~~--~~~--------~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~  295 (296)
T cd05095         237 LSDEQV--IEN--------TGEFFRDQGR---QVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL  295 (296)
T ss_pred             cChHHH--HHH--------HHHHHhhccc---cccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            321111  000        0011110000   0001112234566889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.86  E-value=8.5e-22  Score=136.18  Aligned_cols=143  Identities=18%  Similarity=0.157  Sum_probs=90.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.+.....  .........++..|++||.+.....++.++|+||+|+++|+|++|..||....
T Consensus       132 p~Nil~~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~  209 (301)
T cd07873         132 PQNLLINERGELKLADFGLARAKSI--PTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGST  209 (301)
T ss_pred             HHHEEECCCCcEEECcCcchhccCC--CCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999875421  11122234568899999766555567889999999999999999999997432


Q ss_pred             cCchhHHHHHHHhhhhh----hHHHhhhhcccccc-------hhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVS----VMEVVDANLLTRED-------RHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ..  .....+.......    ...+..........       ........++..+.+++.+||+.||.+|||++++++
T Consensus       210 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~  285 (301)
T cd07873         210 VE--EQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK  285 (301)
T ss_pred             HH--HHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            21  1111111111111    11111110000000       000111234566889999999999999999999987

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.86  E-value=1.5e-21  Score=133.78  Aligned_cols=143  Identities=25%  Similarity=0.261  Sum_probs=89.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||++..+..  .........++..|+|||.+.....++.++|+||+|++++++++|..||....
T Consensus       129 p~nil~~~~~~~~l~dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~  206 (285)
T cd07861         129 PQNLLIDNKGVIKLADFGLARAFGI--PVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDS  206 (285)
T ss_pred             HHHEEEcCCCcEEECcccceeecCC--CcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence            6799999999999999999876421  11122334567889999766555557889999999999999999999986422


Q ss_pred             cCchhHHHHHHHhhh---h------hhHHHhhhhccc-ccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLS---V------SVMEVVDANLLT-REDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~---~------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ... ...........   .      ...+. ...... ...........++.++.+++.+||..||.+|||+.+++.
T Consensus       207 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~  281 (285)
T cd07861         207 EID-QLFRIFRILGTPTEDVWPGVTSLPDY-KNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN  281 (285)
T ss_pred             HHH-HHHHHHHHhCCCChhhhhcchhhHHH-HhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence            111 11110000000   0      00000 000000 000001112235667889999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.86  E-value=3.3e-21  Score=133.43  Aligned_cols=136  Identities=22%  Similarity=0.369  Sum_probs=94.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||+++.+.............++..|++||. .....++.++|+||+|+++|++++ |..||...
T Consensus       137 p~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~-~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~  215 (303)
T cd05110         137 ARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC-IHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGI  215 (303)
T ss_pred             cceeeecCCCceEEccccccccccCcccccccCCCccccccCCHHH-hccCCCChHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            7899999999999999999987532222212222345678999954 455667889999999999999997 88888643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhh
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLF  157 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~  157 (164)
                      ..  ...            ...+......      ..+..++..+.+++..||..+|++||+++++++.|..+.+...
T Consensus       216 ~~--~~~------------~~~~~~~~~~------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~~  273 (303)
T cd05110         216 PT--REI------------PDLLEKGERL------PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDPQ  273 (303)
T ss_pred             CH--HHH------------HHHHHCCCCC------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhchh
Confidence            11  111            1111111100      1112234558899999999999999999999999999876554

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.86  E-value=3.4e-22  Score=140.23  Aligned_cols=125  Identities=23%  Similarity=0.264  Sum_probs=97.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      +.||++++++.+||+|||+|+.+  ..........+||+.|++| ++..+..++.++||||+||++|||++-+.+|... 
T Consensus       134 ~~Nifltk~~~VkLgDfGlaK~l--~~~~~~a~tvvGTp~YmcP-Eil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~-  209 (426)
T KOG0589|consen  134 CANIFLTKDKKVKLGDFGLAKIL--NPEDSLASTVVGTPYYMCP-EILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKAS-  209 (426)
T ss_pred             hhhhhccccCceeecchhhhhhc--CCchhhhheecCCCcccCH-HHhCCCCCCccCcchhhcchHHHHHhcccccCcc-
Confidence            36999999999999999999987  3333355678899999999 7777888999999999999999999999999742 


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTE  148 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  148 (164)
                                      +...++.+.....   ..+.+...+.++..++..||+.+|..||++.+++..
T Consensus       210 ----------------~m~~Li~ki~~~~---~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  210 ----------------NMSELILKINRGL---YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             ----------------chHHHHHHHhhcc---CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence                            1112222221111   223445566779999999999999999999999987

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.86  E-value=1e-21  Score=127.64  Aligned_cols=126  Identities=21%  Similarity=0.240  Sum_probs=95.2

Q ss_pred             CcceEec---CCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCC
Q 039452            1 PSNVLLD---DNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         1 p~Nill~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      |+|+|+.   .+..+|++|||++..+.   ....+....|++.|++| +++...+++..+|||+.|+++|-++.|..||.
T Consensus       138 P~nllLASK~~~A~vKL~~FGvAi~l~---~g~~~~G~~GtP~fmaP-Evvrkdpy~kpvDiW~cGViLfiLL~G~~PF~  213 (355)
T KOG0033|consen  138 PENLLLASKAKGAAVKLADFGLAIEVN---DGEAWHGFAGTPGYLSP-EVLKKDPYSKPVDIWACGVILYILLVGYPPFW  213 (355)
T ss_pred             hhheeeeeccCCCceeecccceEEEeC---CccccccccCCCcccCH-HHhhcCCCCCcchhhhhhHHHHHHHhCCCCCC
Confidence            6788884   34568999999998873   33345567899999999 55566778999999999999999999999997


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      +....                 .+....+......+.+..+.+++...+++++||..||.+|.|+.+.++
T Consensus       214 ~~~~~-----------------rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~  266 (355)
T KOG0033|consen  214 DEDQH-----------------RLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK  266 (355)
T ss_pred             CccHH-----------------HHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence            53211                 112222233344444445677788999999999999999999998774

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.86  E-value=1.5e-21  Score=135.10  Aligned_cols=132  Identities=22%  Similarity=0.401  Sum_probs=90.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.++++|||.++.+.............++..|++||.+ ....++.++|+||+|+++|++++ |..||...
T Consensus       169 p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~DiwslGvil~el~t~g~~p~~~~  247 (302)
T cd05055         169 ARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESI-FNCVYTFESDVWSYGILLWEIFSLGSNPYPGM  247 (302)
T ss_pred             cceEEEcCCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhh-ccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCC
Confidence            78999999999999999998765322221122223456789999544 45557889999999999999998 89998643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI  152 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~  152 (164)
                      ..... .            ...+.....      ...+...+..+.+++.+||..+|++|||+.++++.|.++
T Consensus       248 ~~~~~-~------------~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         248 PVDSK-F------------YKLIKEGYR------MAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             CchHH-H------------HHHHHcCCc------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence            22111 0            011111100      001122345689999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.86  E-value=1.2e-21  Score=133.22  Aligned_cols=131  Identities=24%  Similarity=0.460  Sum_probs=90.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.++|+|||.++.+.............++..|++|| ......++.++|+||+|+++|++++ |..||...
T Consensus       134 p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe-~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~  212 (266)
T cd05033         134 ARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPE-AIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDM  212 (266)
T ss_pred             cceEEEcCCCCEEECccchhhcccccccceeccCCCCCccccChh-hhccCCCccccchHHHHHHHHHHHccCCCCCCCC
Confidence            689999999999999999998763212211122233456899995 4445668889999999999999997 88888542


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI  152 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~  152 (164)
                      ....  ..            ..+.....      ...+..++..+.+++.+||+.+|++||++.++++.|..+
T Consensus       213 ~~~~--~~------------~~~~~~~~------~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         213 SNQD--VI------------KAVEDGYR------LPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             CHHH--HH------------HHHHcCCC------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            1111  10            11110000      011123455688999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.86  E-value=1e-21  Score=135.96  Aligned_cols=134  Identities=25%  Similarity=0.378  Sum_probs=91.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+|||++.++.+||+|||++...   ...........+..|++|| ......++.++|+||+|+++|++++ |..||...
T Consensus       152 p~Nili~~~~~~kl~dfg~~~~~---~~~~~~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~  227 (303)
T cd05088         152 ARNILVGENYVAKIADFGLSRGQ---EVYVKKTMGRLPVRWMAIE-SLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM  227 (303)
T ss_pred             hheEEecCCCcEEeCccccCccc---chhhhcccCCCcccccCHH-HHhccCCcccccchhhhhHHHHHHhcCCCCcccC
Confidence            78999999999999999988642   1111111122356799995 4455567889999999999999998 99998643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhhc
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFR  158 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~~  158 (164)
                      ....  ..            ..+....      ....+..++..+.+++.+||+.+|++||++++++..|..+.+.-..
T Consensus       228 ~~~~--~~------------~~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~~  286 (303)
T cd05088         228 TCAE--LY------------EKLPQGY------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT  286 (303)
T ss_pred             ChHH--HH------------HHHhcCC------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhhh
Confidence            2111  00            0000000      0001122345688999999999999999999999999988766553

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.86  E-value=2.2e-21  Score=133.25  Aligned_cols=142  Identities=22%  Similarity=0.232  Sum_probs=89.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||+++....   ........++..|+|||.+ ....++.++|+||+||++|++++|..||....
T Consensus       136 p~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~-~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~  211 (288)
T cd07863         136 PENILVTSGGQVKLADFGLARIYSC---QMALTPVVVTLWYRAPEVL-LQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS  211 (288)
T ss_pred             HHHEEECCCCCEEECccCccccccC---cccCCCccccccccCchHh-hCCCCCCcchhhhHHHHHHHHHhCCcCcCCCC
Confidence            6899999999999999999876521   1122335678899999655 45568889999999999999999999986432


Q ss_pred             cCchhHHHHHHHhh---hhhhHHHhh---hhcccc-cchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLL---SVSVMEVVD---ANLLTR-EDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~---~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .. ...........   .........   ...... ..........++..+.+++.+||+.||++|||+++++.
T Consensus       212 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~  284 (288)
T cd07863         212 EA-DQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ  284 (288)
T ss_pred             HH-HHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            11 11111111000   000000000   000000 00001111235566889999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.86  E-value=9.8e-22  Score=133.92  Aligned_cols=129  Identities=25%  Similarity=0.396  Sum_probs=88.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.+|++|||++...   ...........+..|++|| +.....++.++|+||||++++++++ |..||...
T Consensus       140 p~nili~~~~~~kl~dfgl~~~~---~~~~~~~~~~~~~~y~apE-~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~  215 (270)
T cd05047         140 ARNILVGENYVAKIADFGLSRGQ---EVYVKKTMGRLPVRWMAIE-SLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM  215 (270)
T ss_pred             cceEEEcCCCeEEECCCCCcccc---chhhhccCCCCccccCChH-HHccCCCCchhhHHHHHHHHHHHHcCCCCCcccc
Confidence            78999999999999999987532   1111111122356799995 4455668889999999999999997 89998542


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIR  153 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~  153 (164)
                      ....  .   ..         .+....      ....+..++..+.+++.+||+.+|.+|||+.+++..|.++.
T Consensus       216 ~~~~--~---~~---------~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~  269 (270)
T cd05047         216 TCAE--L---YE---------KLPQGY------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  269 (270)
T ss_pred             CHHH--H---HH---------HHhCCC------CCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence            1110  0   00         000000      00111223456889999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.86  E-value=1.9e-21  Score=134.04  Aligned_cols=136  Identities=24%  Similarity=0.375  Sum_probs=88.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh--cCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT--RKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~--g~~p~~~   78 (164)
                      |+||+++.++.++|+|||.++.+.............++..|++||.. ....++.++|+||+|+++|++++  +..||..
T Consensus       158 p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~  236 (296)
T cd05051         158 TRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESV-LLGKFTTKSDVWAFGVTLWEILTLCREQPYEH  236 (296)
T ss_pred             hhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHh-hcCCCCccchhhhhHHHHHHHHhcCCCCCCCC
Confidence            78999999999999999998765322211222334456789999544 44567889999999999999987  6667653


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELS  150 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~  150 (164)
                      .....  ......        ......   ........+..++.++.+++.+||+.||.+|||+.++++.|.
T Consensus       237 ~~~~~--~~~~~~--------~~~~~~---~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~  295 (296)
T cd05051         237 LTDQQ--VIENAG--------HFFRDD---GRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ  295 (296)
T ss_pred             cChHH--HHHHHH--------hccccc---cccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence            22111  100000        000000   000001112234466899999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.86  E-value=1.1e-21  Score=136.03  Aligned_cols=134  Identities=24%  Similarity=0.410  Sum_probs=92.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.++|+|||.++.+.............++..|++||.. ....++.++|+||+|+++|++++ |..||...
T Consensus       168 p~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~  246 (307)
T cd05098         168 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL-FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV  246 (307)
T ss_pred             HHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHh-ccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcC
Confidence            68999999999999999998765221111111122344679999544 45557889999999999999998 77887532


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDS  155 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~  155 (164)
                      ..  ...            ...+....      ....+..++..+.+++.+||..+|.+|||+.++++.|.++.+.
T Consensus       247 ~~--~~~------------~~~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~  302 (307)
T cd05098         247 PV--EEL------------FKLLKEGH------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL  302 (307)
T ss_pred             CH--HHH------------HHHHHcCC------CCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence            11  000            01111110      0111234456688999999999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PTZ00284 protein kinase; Provisional

Probab=99.86  E-value=2e-21  Score=141.72  Aligned_cols=139  Identities=17%  Similarity=0.202  Sum_probs=85.8

Q ss_pred             CcceEecCCc----------------eEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHH
Q 039452            1 PSNVLLDDNM----------------VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGI   64 (164)
Q Consensus         1 p~Nill~~~~----------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~   64 (164)
                      |+|||++.++                .+||+|||.+...     ........|+..|+|||.+ .+..++.++||||+||
T Consensus       260 P~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~-----~~~~~~~~gt~~Y~APE~~-~~~~~~~~~DiwSlGv  333 (467)
T PTZ00284        260 PENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDE-----RHSRTAIVSTRHYRSPEVV-LGLGWMYSTDMWSMGC  333 (467)
T ss_pred             HHHEEEecCCcccccccccccCCCCceEEECCCCccccC-----ccccccccCCccccCcHHh-hcCCCCcHHHHHHHHH
Confidence            6899998665                4999999987542     1122345789999999554 4566888999999999


Q ss_pred             HHHHHHhcCCCCCccccCchhHHHHHHHhhhhhh------------HHHhhhhcccc---cchhh-------hh-HHHHH
Q 039452           65 MLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSV------------MEVVDANLLTR---EDRHF-------AA-KQQCV  121 (164)
Q Consensus        65 ~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~---~~~~~-------~~-~~~~~  121 (164)
                      ++|+|++|+.||.....  ......+........            .++.+......   .....       .. .....
T Consensus       334 il~elltG~~pf~~~~~--~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  411 (467)
T PTZ00284        334 IIYELYTGKLLYDTHDN--LEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRD  411 (467)
T ss_pred             HHHHHHhCCCCCCCCCh--HHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhch
Confidence            99999999999975322  111111111110000            01111000000   00000       00 00113


Q ss_pred             HHHHHHHhhccccCccCCCCHHHHHH
Q 039452          122 SFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus       122 ~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      +.+.+|+.+||++||.+|||++++++
T Consensus       412 ~~~~dli~~mL~~dP~~R~ta~e~L~  437 (467)
T PTZ00284        412 DLLCDLIYGLLHYDRQKRLNARQMTT  437 (467)
T ss_pred             HHHHHHHHHhCCcChhhCCCHHHHhc
Confidence            45779999999999999999999987

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.86  E-value=7.3e-22  Score=134.88  Aligned_cols=129  Identities=24%  Similarity=0.424  Sum_probs=89.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||.++.+.............++..|++||.. .....+.++|+||+|+++|++++ |..||...
T Consensus       147 p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~el~t~g~~p~~~~  225 (277)
T cd05032         147 ARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESL-KDGVFTTKSDVWSFGVVLWEMATLAEQPYQGL  225 (277)
T ss_pred             hheEEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHH-hcCCCCcccchHHHHHHHHHhhccCCCCCccC
Confidence            68999999999999999998765322221122233456789999554 45557889999999999999998 88888532


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELS  150 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~  150 (164)
                      ..  ....            ..+....      ....+..++..+.+++.+||+.+|++|||+.++++.|+
T Consensus       226 ~~--~~~~------------~~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         226 SN--EEVL------------KFVIDGG------HLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK  276 (277)
T ss_pred             CH--HHHH------------HHHhcCC------CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence            11  1111            1111100      00112223566899999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.86  E-value=1.1e-21  Score=140.19  Aligned_cols=147  Identities=18%  Similarity=0.092  Sum_probs=92.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.++|+|||+++.+.............|+..|++|| +.....++.++|+||+||++|+|++|..||....
T Consensus       213 p~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE-~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~  291 (392)
T PHA03207        213 TENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPE-LLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQ  291 (392)
T ss_pred             HHHEEEcCCCCEEEccCccccccCcccccccccccccccCccCHh-HhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence            689999999999999999987653322222233456899999995 5556668889999999999999999999987543


Q ss_pred             cCc--hhHHHHHHHhhhhh----------hHHHhhhhcccccc-h---hhhhHHHHHHHHHHHHhhccccCccCCCCHHH
Q 039452           81 SGE--MTLKRWINDLLSVS----------VMEVVDANLLTRED-R---HFAAKQQCVSFVFNLAMECTIESPERRINAKE  144 (164)
Q Consensus        81 ~~~--~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~  144 (164)
                      ...  ..+...+.......          ....+......... .   ........+.++.+++.+||..||.+|||+.+
T Consensus       292 ~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e  371 (392)
T PHA03207        292 VKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQD  371 (392)
T ss_pred             CCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHH
Confidence            221  11222111110000          00000000000000 0   00001123456788999999999999999999


Q ss_pred             HHHH
Q 039452          145 IVTE  148 (164)
Q Consensus       145 vl~~  148 (164)
                      ++..
T Consensus       372 ~l~~  375 (392)
T PHA03207        372 ILSL  375 (392)
T ss_pred             HhhC
Confidence            9874

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.86  E-value=9.4e-22  Score=132.99  Aligned_cols=126  Identities=27%  Similarity=0.427  Sum_probs=88.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||++.......     .....+..|++|| +.....++.++|+||+||++|++++ |..||...
T Consensus       130 p~nil~~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE-~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~  203 (256)
T cd05082         130 ARNVLVSEDNVAKVSDFGLTKEASSTQ-----DTGKLPVKWTAPE-ALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI  203 (256)
T ss_pred             hheEEEcCCCcEEecCCccceeccccC-----CCCccceeecCHH-HHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC
Confidence            789999999999999999987642111     1223456799995 4455567889999999999999997 88888532


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI  152 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~  152 (164)
                      ..     ....         ..+...      .....+..++..+.+++.+||+.+|++|||+.++++.|+++
T Consensus       204 ~~-----~~~~---------~~~~~~------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~  256 (256)
T cd05082         204 PL-----KDVV---------PRVEKG------YKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI  256 (256)
T ss_pred             CH-----HHHH---------HHHhcC------CCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence            11     1000         001100      00112234566789999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.86  E-value=3.6e-21  Score=137.38  Aligned_cols=145  Identities=17%  Similarity=0.097  Sum_probs=89.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||+++...... ........||+.|+|||. .....++.++|+||+||++|++++|..||....
T Consensus       210 P~NIll~~~~~vkL~DFG~a~~~~~~~-~~~~~~~~gt~~y~aPE~-~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~  287 (391)
T PHA03212        210 AENIFINHPGDVCLGDFGAACFPVDIN-ANKYYGWAGTIATNAPEL-LARDPYGPAVDIWSAGIVLFEMATCHDSLFEKD  287 (391)
T ss_pred             hHhEEEcCCCCEEEEeCCccccccccc-ccccccccCccCCCChhh-hcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcc
Confidence            789999999999999999986532111 112223568999999954 445668899999999999999999998764321


Q ss_pred             c------CchhHHHHHHHhhh----------hhhHHHh----hhhccccc-chhhhhHHHHHHHHHHHHhhccccCccCC
Q 039452           81 S------GEMTLKRWINDLLS----------VSVMEVV----DANLLTRE-DRHFAAKQQCVSFVFNLAMECTIESPERR  139 (164)
Q Consensus        81 ~------~~~~~~~~~~~~~~----------~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  139 (164)
                      .      ....+...+.....          .......    ........ ..........+.++.+++.+||+.||.+|
T Consensus       288 ~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~R  367 (391)
T PHA03212        288 GLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHR  367 (391)
T ss_pred             cccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhC
Confidence            1      11111111111000          0000000    00000000 01111122456678999999999999999


Q ss_pred             CCHHHHHH
Q 039452          140 INAKEIVT  147 (164)
Q Consensus       140 ps~~~vl~  147 (164)
                      ||++++++
T Consensus       368 pta~elL~  375 (391)
T PHA03212        368 PSAEALLD  375 (391)
T ss_pred             CCHHHHhc
Confidence            99999986

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.86  E-value=1.2e-21  Score=134.23  Aligned_cols=129  Identities=28%  Similarity=0.500  Sum_probs=89.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||++..+.............++..|++|| .......+.++|+||+|+++|++++ |..||...
T Consensus       152 p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE-~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~  230 (283)
T cd05090         152 ARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPE-AIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGF  230 (283)
T ss_pred             cceEEEcCCCcEEeccccccccccCCcceecccCCCccceecChH-HhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCC
Confidence            789999999999999999987653222222222334567799995 4445567889999999999999998 88888642


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELS  150 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~  150 (164)
                      ..  ....            +.+.....      ...+..++..+.+++.+||+.||++||++.++.+.|.
T Consensus       231 ~~--~~~~------------~~~~~~~~------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~  281 (283)
T cd05090         231 SN--QEVI------------EMVRKRQL------LPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLR  281 (283)
T ss_pred             CH--HHHH------------HHHHcCCc------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhh
Confidence            11  1111            11111100      1122334566889999999999999999999988775

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.86  E-value=2.9e-22  Score=139.83  Aligned_cols=123  Identities=20%  Similarity=0.262  Sum_probs=86.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||+++.....  ........|++.|+|||. .....++.++|+||+||++|+|++|..||....
T Consensus       123 p~NIll~~~~~~kl~DfG~a~~~~~~--~~~~~~~~gt~~y~aPE~-~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~  199 (323)
T cd05571         123 LENLMLDKDGHIKITDFGLCKEGISD--GATMKTFCGTPEYLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD  199 (323)
T ss_pred             HHHEEECCCCCEEEeeCCCCcccccC--CCcccceecCccccChhh-hcCCCCCccccCcccchhhhhhhcCCCCCCCCC
Confidence            68999999999999999998753211  112233568999999954 445668889999999999999999999996421


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCC-----CHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRI-----NAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~vl~  147 (164)
                      .  ....   .        .+...        ....+..++..+.+++.+||+.||++||     ++.++++
T Consensus       200 ~--~~~~---~--------~~~~~--------~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~  250 (323)
T cd05571         200 H--EKLF---E--------LILME--------EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME  250 (323)
T ss_pred             H--HHHH---H--------HHHcC--------CCCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence            1  0000   0        00000        0011233456689999999999999999     7888865

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.85  E-value=1.6e-21  Score=134.43  Aligned_cols=136  Identities=24%  Similarity=0.346  Sum_probs=88.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh--cCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT--RKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~--g~~p~~~   78 (164)
                      |+||+++.++.+||+|||++..+.............++..|++||.. ....++.++|+||||++++++++  +..||..
T Consensus       157 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~  235 (295)
T cd05097         157 TRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESI-LLGKFTTASDVWAFGVTLWEMFTLCKEQPYSL  235 (295)
T ss_pred             hhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhh-ccCCcCchhhHHHHHHHHHHHHHcCCCCCCcc
Confidence            78999999999999999998765322211122233456789999554 45557889999999999999988  5567653


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELS  150 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~  150 (164)
                      .....  .....        ....+...   .......+..++..+.+++.+||+.||++|||++++++.|.
T Consensus       236 ~~~~~--~~~~~--------~~~~~~~~---~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         236 LSDEQ--VIENT--------GEFFRNQG---RQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             cChHH--HHHHH--------HHhhhhcc---ccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence            22111  11000        00000000   00000112224456899999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.85  E-value=9.7e-23  Score=149.65  Aligned_cols=132  Identities=25%  Similarity=0.487  Sum_probs=100.7

Q ss_pred             cceEecCCceEEEeccccceeccCCCC-ccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            2 SNVLLDDNMVAHLSDFGIAKLLIGEDQ-SMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         2 ~Nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      .|||++.+..+|++|||++|.+.+... ........-+..|.|| +.+...+|+.++||||||+++||+++ |..||=.+
T Consensus       760 RNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAP-EAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdm  838 (996)
T KOG0196|consen  760 RNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAP-EAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM  838 (996)
T ss_pred             hheeeccceEEEeccccceeecccCCCccccccCCccceeecCh-hHhhhcccCchhhccccceEEEEecccCCCccccc
Confidence            599999999999999999998743331 1111112336789999 55557779999999999999999885 88887543


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRD  154 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~  154 (164)
                      .+.+                 .+..   ....++.+.|..|+..+.+||..||+.|=.+||.+.+++..|+++.+
T Consensus       839 SNQd-----------------VIka---Ie~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr  893 (996)
T KOG0196|consen  839 SNQD-----------------VIKA---IEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR  893 (996)
T ss_pred             chHH-----------------HHHH---HHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence            2211                 1111   12345566677899999999999999999999999999999998875

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=3.5e-22  Score=138.80  Aligned_cols=123  Identities=23%  Similarity=0.294  Sum_probs=85.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||+++.....  ........|++.|+|||.+ ....++.++|+||+||++|++++|..||....
T Consensus       121 p~Nili~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwslGvil~el~tg~~pf~~~~  197 (312)
T cd05585         121 PENILLDYQGHIALCDFGLCKLNMKD--DDKTNTFCGTPEYLAPELL-LGHGYTKAVDWWTLGVLLYEMLTGLPPFYDEN  197 (312)
T ss_pred             HHHeEECCCCcEEEEECcccccCccC--CCccccccCCcccCCHHHH-cCCCCCCccceechhHHHHHHHhCCCCcCCCC
Confidence            68999999999999999998753211  1122345689999999554 45567889999999999999999999996421


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCC---HHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRIN---AKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps---~~~vl~  147 (164)
                      ..     ....        .+...        ....+..++..+.+++.+||+.||++||+   +.+++.
T Consensus       198 ~~-----~~~~--------~~~~~--------~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~  246 (312)
T cd05585         198 VN-----EMYR--------KILQE--------PLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKN  246 (312)
T ss_pred             HH-----HHHH--------HHHcC--------CCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence            11     0000        11110        01112334566889999999999999985   455543

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.85  E-value=1.4e-21  Score=132.36  Aligned_cols=131  Identities=27%  Similarity=0.417  Sum_probs=90.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc-cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS-MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~   78 (164)
                      |+||+++.++.+||+|||.++.+...... .......++..|++||. .....++.++|+||||+++|++++ |..||..
T Consensus       123 p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~  201 (257)
T cd05115         123 ARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPEC-INFRKFSSRSDVWSYGITMWEAFSYGQKPYKK  201 (257)
T ss_pred             hheEEEcCCCcEEeccCCccccccCCccceeccCCCCCCcccCCHHH-HccCCCCchhhHHHHHHHHHHHhcCCCCCcCc
Confidence            68999999999999999998754221111 11111223568999954 445567889999999999999996 9999864


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI  152 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~  152 (164)
                      .....              ....+....      ....+..+++++.+++.+||+.+|++||++.++.+.|+.+
T Consensus       202 ~~~~~--------------~~~~~~~~~------~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         202 MKGPE--------------VMSFIEQGK------RLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY  255 (257)
T ss_pred             CCHHH--------------HHHHHHCCC------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence            32111              011111111      0112234466788999999999999999999999988765

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.85  E-value=2.7e-21  Score=138.23  Aligned_cols=133  Identities=23%  Similarity=0.399  Sum_probs=92.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+|||++.++.+||+|||+++...............++..|++||.+ ....++.++|+||+|+++|++++ |..||...
T Consensus       267 p~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~  345 (401)
T cd05107         267 ARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESI-FNNLYTTLSDVWSFGILLWEIFTLGGTPYPEL  345 (401)
T ss_pred             cceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHh-cCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCC
Confidence            68999999999999999998764222211122234567789999544 45567889999999999999998 88888643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIR  153 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~  153 (164)
                      .....             ....+....      ....+..++..+.+++.+||..+|.+||++++|++.|+.+.
T Consensus       346 ~~~~~-------------~~~~~~~~~------~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~  400 (401)
T cd05107         346 PMNEQ-------------FYNAIKRGY------RMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL  400 (401)
T ss_pred             CchHH-------------HHHHHHcCC------CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence            21111             001111110      01112334567899999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.85  E-value=2e-21  Score=131.36  Aligned_cols=128  Identities=27%  Similarity=0.479  Sum_probs=90.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.++|+|||.++.+.............++..|++||... ...++.++|+||+|++++++++ |..||...
T Consensus       133 p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~~g~~p~~~~  211 (262)
T cd00192         133 ARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLK-DGIFTSKSDVWSFGVLLWEIFTLGATPYPGL  211 (262)
T ss_pred             cceEEECCCCcEEEcccccccccccccccccccCCCcCccccCHHHhc-cCCcchhhccHHHHHHHHHHHhcCCCCCCCC
Confidence            789999999999999999998764322222233445678899996544 4468889999999999999998 58888754


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTEL  149 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l  149 (164)
                      ..  ....            ..+..      ......+..++..+.+++.+||..+|++|||+.++++.|
T Consensus       212 ~~--~~~~------------~~~~~------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l  261 (262)
T cd00192         212 SN--EEVL------------EYLRK------GYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERL  261 (262)
T ss_pred             CH--HHHH------------HHHHc------CCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence            11  1110            00100      011112334466789999999999999999999999876

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.85  E-value=3.5e-21  Score=130.98  Aligned_cols=129  Identities=24%  Similarity=0.461  Sum_probs=88.4

Q ss_pred             CcceEecCCc-----eEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCC
Q 039452            1 PSNVLLDDNM-----VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKK   74 (164)
Q Consensus         1 p~Nill~~~~-----~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~   74 (164)
                      |+||+++.++     .++++|||++..+.............++..|++||.+ ....++.++|+||||+++|++++ |..
T Consensus       134 p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Dv~slG~il~ellt~g~~  212 (269)
T cd05044         134 ARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESL-LDGKFTTQSDVWSFGVLMWEILTLGQQ  212 (269)
T ss_pred             hheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccCHHHH-ccCCcccchhHHHHHHHHHHHHHcCCC
Confidence            6899999877     8999999998765322111112223456789999544 45568899999999999999998 899


Q ss_pred             CCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHH
Q 039452           75 PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELS  150 (164)
Q Consensus        75 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~  150 (164)
                      ||.....  .....            .+...      .....+..++..+.+++.+||..+|.+||+++++++.|.
T Consensus       213 p~~~~~~--~~~~~------------~~~~~------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~  268 (269)
T cd05044         213 PYPALNN--QEVLQ------------HVTAG------GRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ  268 (269)
T ss_pred             CCcccCH--HHHHH------------HHhcC------CccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            9863211  11110            00000      011122334566889999999999999999999998875

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.85  E-value=2.9e-21  Score=130.21  Aligned_cols=129  Identities=29%  Similarity=0.495  Sum_probs=87.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.++|+|||.+.................+..|++||.+ ....++.++|+||+|+++|++++ |..||...
T Consensus       121 p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~-~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~  199 (251)
T cd05041         121 ARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEAL-NYGRYTSESDVWSYGILLWETFSLGDTPYPGM  199 (251)
T ss_pred             cceEEEcCCCcEEEeeccccccccCCcceeccccCcceeccCChHhh-ccCCCCcchhHHHHHHHHHHHHhccCCCCccC
Confidence            78999999999999999998764211111111112235679999544 45568889999999999999998 78887543


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELS  150 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~  150 (164)
                      ....  ..            ..+....      ....+..++..+.+++.+||+.+|.+|||+.++++.|.
T Consensus       200 ~~~~--~~------------~~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         200 SNQQ--TR------------ERIESGY------RMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             CHHH--HH------------HHHhcCC------CCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence            2111  11            0011000      01112234556899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.85  E-value=1.9e-21  Score=133.71  Aligned_cols=138  Identities=22%  Similarity=0.361  Sum_probs=92.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.++|+|||+++...............++..|++||.. ....++.++|+||+||++|++++ |..||...
T Consensus       147 p~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~-~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~  225 (288)
T cd05061         147 ARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESL-KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGL  225 (288)
T ss_pred             hheEEEcCCCcEEECcCCccccccccccccccCCCcccccccCHHHh-ccCCCChHhHHHHHHHHHHHHHhCCCCCCCCC
Confidence            68999999999999999998764221211111223346679999544 45567889999999999999998 77787542


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhhcc
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRN  159 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~~~  159 (164)
                      ...+  ..            +.+.....      ...+..++..+.+++.+||+.+|++|||+.++++.|......-+..
T Consensus       226 ~~~~--~~------------~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~  285 (288)
T cd05061         226 SNEQ--VL------------KFVMDGGY------LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPE  285 (288)
T ss_pred             CHHH--HH------------HHHHcCCC------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCC
Confidence            1111  00            11100000      0011233456899999999999999999999999888765544433

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.85  E-value=2.5e-21  Score=131.27  Aligned_cols=129  Identities=26%  Similarity=0.448  Sum_probs=88.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.++|+|||++....... .........+..|++|| ......++.++|+||+|++++++++ |..||...
T Consensus       131 p~Nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~  208 (261)
T cd05068         131 ARNVLVGENNICKVADFGLARVIKEDI-YEAREGAKFPIKWTAPE-AALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGM  208 (261)
T ss_pred             cceEEEcCCCCEEECCcceEEEccCCc-ccccCCCcCceeccCcc-ccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCC
Confidence            789999999999999999998753111 11111122345799994 5455668889999999999999998 99898643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSK  151 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~  151 (164)
                      ....  ..            ..+....      ....+..++..+.+++.+||+.+|.+||++.++.+.|+.
T Consensus       209 ~~~~--~~------------~~~~~~~------~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~  260 (261)
T cd05068         209 TNAE--VL------------QQVDQGY------RMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED  260 (261)
T ss_pred             CHHH--HH------------HHHHcCC------CCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence            2111  00            0111100      001122345568999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.85  E-value=2.7e-21  Score=135.49  Aligned_cols=133  Identities=24%  Similarity=0.414  Sum_probs=91.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||+++.+.............++..|++||.+ ....++.++|+||+|+++|++++ |..||...
T Consensus       162 p~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~el~~~g~~p~~~~  240 (334)
T cd05100         162 ARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEAL-FDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI  240 (334)
T ss_pred             cceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHh-ccCCcCchhhhHHHHHHHHHHHhcCCCCCCCC
Confidence            78999999999999999998765322212112223345679999544 45567889999999999999998 78887542


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRD  154 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~  154 (164)
                      ....     .         ...+.....      ...+..++..+.+++.+||+.+|++|||+.++++.|..+..
T Consensus       241 ~~~~-----~---------~~~~~~~~~------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~  295 (334)
T cd05100         241 PVEE-----L---------FKLLKEGHR------MDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT  295 (334)
T ss_pred             CHHH-----H---------HHHHHcCCC------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence            1111     0         011111100      01122344568899999999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.85  E-value=1.8e-21  Score=133.76  Aligned_cols=129  Identities=26%  Similarity=0.386  Sum_probs=88.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.++|+|||.++.+..............+..|++||. .....++.++|+||+||++|++++ |..||...
T Consensus       158 p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~  236 (288)
T cd05050         158 TRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPES-IFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGM  236 (288)
T ss_pred             HhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHH-HhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999876532221111222344567999954 445568889999999999999997 77787533


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELS  150 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~  150 (164)
                      ....     ..         ..+......      ..+..++..+.+++.+||+.+|++|||+.++++.|+
T Consensus       237 ~~~~-----~~---------~~~~~~~~~------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~  287 (288)
T cd05050         237 AHEE-----VI---------YYVRDGNVL------SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ  287 (288)
T ss_pred             CHHH-----HH---------HHHhcCCCC------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence            2111     00         011111000      112234566899999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.85  E-value=3.5e-21  Score=130.50  Aligned_cols=129  Identities=28%  Similarity=0.477  Sum_probs=88.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.++|+|||.+..+..... .......++..|+|||. ......+.++|+||||+++|++++ |..||...
T Consensus       130 p~Nili~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~  207 (260)
T cd05070         130 SANILVGDGLVCKIADFGLARLIEDNEY-TARQGAKFPIKWTAPEA-ALYGRFTIKSDVWSFGILLTELVTKGRVPYPGM  207 (260)
T ss_pred             cceEEEeCCceEEeCCceeeeeccCccc-ccccCCCCCccccChHH-HhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCC
Confidence            6899999999999999999976532111 11112234567999954 445667889999999999999998 88888643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSK  151 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~  151 (164)
                      ....  ..            ..+...      .....+...+..+.+++.+||..+|++|||+.++.+.|++
T Consensus       208 ~~~~--~~------------~~~~~~------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         208 NNRE--VL------------EQVERG------YRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             CHHH--HH------------HHHHcC------CCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            2111  00            000000      0011123345568999999999999999999999988864

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.85  E-value=1.6e-21  Score=135.63  Aligned_cols=78  Identities=19%  Similarity=0.284  Sum_probs=59.9

Q ss_pred             CcceEe----cCCceEEEeccccceeccCCCCc-cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCC
Q 039452            1 PSNVLL----DDNMVAHLSDFGIAKLLIGEDQS-MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKP   75 (164)
Q Consensus         1 p~Nill----~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p   75 (164)
                      |+||++    +.++.+||+|||+++........ .......++..|+|||.+.....++.++|+||+||++|++++|..|
T Consensus       136 p~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~  215 (317)
T cd07867         136 PANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPI  215 (317)
T ss_pred             HHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCC
Confidence            689999    46689999999999875322111 1223346788999997665555678899999999999999999999


Q ss_pred             CCc
Q 039452           76 TDE   78 (164)
Q Consensus        76 ~~~   78 (164)
                      |..
T Consensus       216 f~~  218 (317)
T cd07867         216 FHC  218 (317)
T ss_pred             ccc
Confidence            864

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.85  E-value=1.8e-21  Score=131.24  Aligned_cols=129  Identities=26%  Similarity=0.402  Sum_probs=86.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||.+.................+..|++||. .....++.++|+||+|+++|++++ |..||...
T Consensus       122 p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~  200 (252)
T cd05084         122 ARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEA-LNYGRYSSESDVWSFGILLWEAFSLGAVPYANL  200 (252)
T ss_pred             hheEEEcCCCcEEECccccCcccccccccccCCCCCCceeecCchh-hcCCCCChHHHHHHHHHHHHHHHhCCCCCcccc
Confidence            6899999999999999999876422111111111123456999954 445557889999999999999997 88887532


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELS  150 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~  150 (164)
                      ....              ....+.....      ...+..++..+.+++.+||+.+|++|||+.++++.|.
T Consensus       201 ~~~~--------------~~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         201 SNQQ--------------TREAIEQGVR------LPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             CHHH--------------HHHHHHcCCC------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence            1110              1111111100      0112234556889999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.85  E-value=3.9e-21  Score=130.93  Aligned_cols=133  Identities=23%  Similarity=0.405  Sum_probs=92.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.++++|||+++.+...... ......++..|++||.+ ....++.++|+||+|++++++++ |..||...
T Consensus       135 p~nili~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~el~~~g~~pf~~~  212 (270)
T cd05056         135 ARNVLVSSPDCVKLGDFGLSRYLEDESYY-KASKGKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILMLGVKPFQGV  212 (270)
T ss_pred             hheEEEecCCCeEEccCceeeecccccce-ecCCCCccccccChhhh-ccCCCCchhhhHHHHHHHHHHHHcCCCCCCCC
Confidence            68999999999999999998875332211 11122345679999544 45567889999999999999886 99998643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDS  155 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~  155 (164)
                      ....  ....            +...      .....+..++..+.+++.+||..+|++|||+.++++.|..+..+
T Consensus       213 ~~~~--~~~~------------~~~~------~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~  268 (270)
T cd05056         213 KNND--VIGR------------IENG------ERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE  268 (270)
T ss_pred             CHHH--HHHH------------HHcC------CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence            2111  0000            0000      00112234456689999999999999999999999999987754

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.85  E-value=2.9e-21  Score=130.58  Aligned_cols=130  Identities=22%  Similarity=0.421  Sum_probs=89.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc-cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS-MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~   78 (164)
                      |+||+++.++.+||+|||.++.+...... .......++..|++| +......++.++|+||+|+++|+|++ |..||..
T Consensus       125 p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~p-E~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~  203 (257)
T cd05040         125 ARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAP-ESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAG  203 (257)
T ss_pred             cccEEEecCCEEEeccccccccccccccceecccCCCCCceecCH-HHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence            78999999999999999998875322111 111223467789999 45555667889999999999999998 9999864


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELS  150 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~  150 (164)
                      .....  ...            .+...     ......+...+..+.+++.+||+.+|++|||+.++++.|.
T Consensus       204 ~~~~~--~~~------------~~~~~-----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         204 LSGSQ--ILK------------KIDKE-----GERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             CCHHH--HHH------------HHHhc-----CCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence            32111  000            00000     0011112234556889999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.85  E-value=1.1e-21  Score=136.80  Aligned_cols=118  Identities=21%  Similarity=0.267  Sum_probs=83.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||+++.....  ........|++.|+|||. .....++.++|+||+||++|++++|..||....
T Consensus       124 p~NIli~~~~~~kL~DfG~~~~~~~~--~~~~~~~~gt~~y~aPE~-~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~  200 (320)
T cd05590         124 LDNVLLDHEGHCKLADFGMCKEGIFN--GKTTSTFCGTPDYIAPEI-LQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAEN  200 (320)
T ss_pred             HHHeEECCCCcEEEeeCCCCeecCcC--CCcccccccCccccCHHH-HcCCCCCCccchhhhHHHHHHHhhCCCCCCCCC
Confidence            68999999999999999998753211  112233568999999954 455667889999999999999999999996432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINA  142 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  142 (164)
                      ...  ..   .        .+....        ...+..++..+.+++.+||+.||++|+++
T Consensus       201 ~~~--~~---~--------~i~~~~--------~~~~~~~~~~~~~li~~~L~~dP~~R~~~  241 (320)
T cd05590         201 EDD--LF---E--------AILNDE--------VVYPTWLSQDAVDILKAFMTKNPTMRLGS  241 (320)
T ss_pred             HHH--HH---H--------HHhcCC--------CCCCCCCCHHHHHHHHHHcccCHHHCCCC
Confidence            111  00   0        011000        01122345668899999999999999998

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.85  E-value=1.2e-21  Score=136.52  Aligned_cols=123  Identities=20%  Similarity=0.250  Sum_probs=86.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||+++....  .........++..|+|||. ..+..++.++|+||+||++|++++|..||....
T Consensus       124 p~Nill~~~~~~kl~Dfg~~~~~~~--~~~~~~~~~g~~~y~aPE~-~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~  200 (318)
T cd05570         124 LDNVLLDSEGHIKIADFGMCKEGIL--GGVTTSTFCGTPDYIAPEI-LSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDD  200 (318)
T ss_pred             HHHeEECCCCcEEecccCCCeecCc--CCCcccceecCccccCHHH-hcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCC
Confidence            6899999999999999999865311  1112233458899999954 455668889999999999999999999996432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCH-----HHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINA-----KEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~-----~~vl~  147 (164)
                      .  ....   .        .+....        ...+..++..+.+++.+||+.||++|||+     .+++.
T Consensus       201 ~--~~~~---~--------~i~~~~--------~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~  251 (318)
T cd05570         201 E--DELF---Q--------SILEDE--------VRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG  251 (318)
T ss_pred             H--HHHH---H--------HHHcCC--------CCCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence            1  1000   0        011000        01122345668999999999999999999     77764

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.85  E-value=5.7e-21  Score=134.36  Aligned_cols=134  Identities=22%  Similarity=0.381  Sum_probs=91.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||++..+.............++..|++||.+ ....++.++|+||+|+++|++++ |..||...
T Consensus       207 p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~  285 (343)
T cd05103         207 ARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI-FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV  285 (343)
T ss_pred             cCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHh-cCCCCCchhhHHHHHHHHHHHHHCCCCCCCCc
Confidence            78999999999999999998765322222222223355679999554 45567889999999999999996 88888643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRD  154 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~  154 (164)
                      ..... ..            ..+.....      ...+...++.+.+++..||+.+|++|||+.++++.|+.+.+
T Consensus       286 ~~~~~-~~------------~~~~~~~~------~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~  341 (343)
T cd05103         286 KIDEE-FC------------RRLKEGTR------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  341 (343)
T ss_pred             cccHH-HH------------HHHhccCC------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            22111 00            00000000      00111234458899999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.85  E-value=3.7e-21  Score=138.70  Aligned_cols=139  Identities=21%  Similarity=0.237  Sum_probs=91.1

Q ss_pred             CcceEecC--CceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDD--NMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+||||..  ...+||+|||+|...   ... .. ..+.+..|+|| |++.+.+++.+.||||||||+.||++|.+.|.+
T Consensus       317 PENILL~~~~r~~vKVIDFGSSc~~---~q~-vy-tYiQSRfYRAP-EVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG  390 (586)
T KOG0667|consen  317 PENILLKDPKRSRIKVIDFGSSCFE---SQR-VY-TYIQSRFYRAP-EVILGLPYDTAIDMWSLGCILAELFTGEPLFPG  390 (586)
T ss_pred             hhheeeccCCcCceeEEeccccccc---CCc-ce-eeeeccccccc-hhhccCCCCCccceeehhhhHHhHhcCccccCC
Confidence            89999964  347999999999874   222 22 67899999999 555678899999999999999999999888864


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhccc-----c---------------------------------cch------hh
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLT-----R---------------------------------EDR------HF  114 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~---------------------------------~~~------~~  114 (164)
                      .  .+...-..+....+.+...+++.....     .                                 ..+      ..
T Consensus       391 ~--ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~  468 (586)
T KOG0667|consen  391 D--NEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLES  468 (586)
T ss_pred             C--CHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccch
Confidence            2  222222222222222222222211000     0                                 000      00


Q ss_pred             hhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452          115 AAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus       115 ~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .........+.+++++||.+||.+|+|..+.++
T Consensus       469 ~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~  501 (586)
T KOG0667|consen  469 GLPKADDKLFIDFLKRCLEWDPAERITPAQALN  501 (586)
T ss_pred             hcccccHHHHHHHHHHHhccCchhcCCHHHHhc
Confidence            000122345889999999999999999998876

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.85  E-value=2.3e-21  Score=132.82  Aligned_cols=127  Identities=19%  Similarity=0.280  Sum_probs=87.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhh----ccCcccCccchHhHHHHHHHHHhcCCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYG----REGRVSTNGDVYSFGIMLMEAFTRKKPT   76 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~----~~~~~~~~~Di~s~g~~~~~~~~g~~p~   76 (164)
                      |+||+++.++.++|+|||++.....  .........++..|++||.+.    ....++.++|+||+||++|++++|..||
T Consensus       131 p~nili~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~  208 (282)
T cd06643         131 AGNILFTLDGDIKLADFGVSAKNTR--TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPH  208 (282)
T ss_pred             cccEEEccCCCEEEccccccccccc--cccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCc
Confidence            6899999999999999999876421  111223345788999996553    2344677899999999999999999998


Q ss_pred             CccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           77 DEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .........             ......     .......+..++..+.+++.+||+.||.+|||+.++++
T Consensus       209 ~~~~~~~~~-------------~~~~~~-----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  261 (282)
T cd06643         209 HELNPMRVL-------------LKIAKS-----EPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ  261 (282)
T ss_pred             cccCHHHHH-------------HHHhhc-----CCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            643211100             000000     00011122334566899999999999999999998875

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.85  E-value=3.6e-22  Score=152.99  Aligned_cols=128  Identities=23%  Similarity=0.286  Sum_probs=93.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCcc--ccccccccccccCchhhhccC--cccCccchHhHHHHHHHHHhcCCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSM--TQTQTLATIGYMAPVEYGREG--RVSTNGDVYSFGIMLMEAFTRKKPT   76 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~--~~~~~~Di~s~g~~~~~~~~g~~p~   76 (164)
                      |+||+++.+|.+|++|||.|+.+.+.....  ......||+.|||||.+....  ....+.||||+||++.||+||+.||
T Consensus      1362 ~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW 1441 (1509)
T KOG4645|consen 1362 PANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPW 1441 (1509)
T ss_pred             ccceeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCch
Confidence            689999999999999999999875443221  233568999999997776543  3557899999999999999999998


Q ss_pred             CccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           77 DEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ......-..                .-+.-   -....+.|..++.+.++++..||..||+.|+++.++++
T Consensus      1442 ~~~dne~aI----------------My~V~---~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1442 AELDNEWAI----------------MYHVA---AGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred             hhccchhHH----------------HhHHh---ccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence            753222110                00000   00112234457888999999999999999999987765

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.85  E-value=5e-21  Score=129.95  Aligned_cols=130  Identities=26%  Similarity=0.464  Sum_probs=90.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.++|+|||.++.+..... .......++..|++|| ......++.++|+||+|+++|++++ |..||...
T Consensus       130 p~Nill~~~~~~~L~dfg~~~~~~~~~~-~~~~~~~~~~~y~~PE-~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~  207 (262)
T cd05071         130 AANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPE-AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM  207 (262)
T ss_pred             cccEEEcCCCcEEeccCCceeecccccc-ccccCCcccceecCHh-HhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCC
Confidence            7899999999999999999876532111 1112234567899995 4445567889999999999999999 78888643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI  152 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~  152 (164)
                      .....     ..        ... ..      .....+..++..+.+++.+||+.+|++||+++++++.|+..
T Consensus       208 ~~~~~-----~~--------~~~-~~------~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~  260 (262)
T cd05071         208 VNREV-----LD--------QVE-RG------YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  260 (262)
T ss_pred             ChHHH-----HH--------HHh-cC------CCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence            21110     00        000 00      00111233456688999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.85  E-value=1.5e-21  Score=132.78  Aligned_cols=130  Identities=22%  Similarity=0.310  Sum_probs=86.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhh--ccCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYG--REGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~--~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+||+++.++.++|+|||++..+..  .........++..|++||.+.  ....++.++|+||+|+++|++++|..||..
T Consensus       134 p~nill~~~~~~~l~dfg~~~~~~~--~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~  211 (267)
T cd06646         134 GANILLTDNGDVKLADFGVAAKITA--TIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFD  211 (267)
T ss_pred             HHHEEECCCCCEEECcCccceeecc--cccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccc
Confidence            6799999999999999999876521  111122345778999996553  233467789999999999999999999853


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTE  148 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  148 (164)
                      ........             ......   ...........++..+.+++.+||..+|++|||++++++.
T Consensus       212 ~~~~~~~~-------------~~~~~~---~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  265 (267)
T cd06646         212 LHPMRALF-------------LMSKSN---FQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTH  265 (267)
T ss_pred             cchhhhhe-------------eeecCC---CCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence            22111000             000000   0000011112345668899999999999999999998864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.85  E-value=2.2e-21  Score=132.62  Aligned_cols=129  Identities=26%  Similarity=0.442  Sum_probs=86.4

Q ss_pred             CcceEecCCc---eEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCC
Q 039452            1 PSNVLLDDNM---VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPT   76 (164)
Q Consensus         1 p~Nill~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~   76 (164)
                      |+||+++.++   .+||+|||+++.+..............+..|++||.+ ....++.++||||+||++|++++ |..||
T Consensus       144 p~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~DiwslG~il~el~~~g~~pf  222 (277)
T cd05036         144 ARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAF-LDGIFTSKTDVWSFGVLLWEIFSLGYMPY  222 (277)
T ss_pred             hheEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHH-hcCCcCchhHHHHHHHHHHHHHcCCCCCC
Confidence            6899998654   6899999998765221111111222345679999555 45568899999999999999996 88898


Q ss_pred             CccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHH
Q 039452           77 DEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELS  150 (164)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~  150 (164)
                      .......  ..            +.+....      ....+..++..+.+++.+||+.+|++|||+.+|++.|.
T Consensus       223 ~~~~~~~--~~------------~~~~~~~------~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         223 PGRTNQE--VM------------EFVTGGG------RLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             CCCCHHH--HH------------HHHHcCC------cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence            6432111  11            1111100      00112234556889999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.85  E-value=1.2e-21  Score=136.95  Aligned_cols=123  Identities=22%  Similarity=0.314  Sum_probs=86.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||+++....  .........|++.|+|||.+ ....++.++|+||+||++|++++|..||....
T Consensus       123 p~NIll~~~~~~kL~DfG~~~~~~~--~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslGvil~elltG~~Pf~~~~  199 (328)
T cd05593         123 LENLMLDKDGHIKITDFGLCKEGIT--DAATMKTFCGTPEYLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD  199 (328)
T ss_pred             HHHeEECCCCcEEEecCcCCccCCC--cccccccccCCcCccChhhh-cCCCCCccCCccccchHHHHHhhCCCCCCCCC
Confidence            6899999999999999999875321  11122335689999999554 45567889999999999999999999996421


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCC-----CHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRI-----NAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~vl~  147 (164)
                      ...  .               .......    ....+..++..+.+++.+||..||.+|+     ++.++++
T Consensus       200 ~~~--~---------------~~~~~~~----~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~  250 (328)
T cd05593         200 HEK--L---------------FELILME----DIKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMR  250 (328)
T ss_pred             HHH--H---------------HHHhccC----CccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhc
Confidence            110  0               0000000    0011233456688999999999999997     7888875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.85  E-value=4.2e-21  Score=130.12  Aligned_cols=129  Identities=28%  Similarity=0.460  Sum_probs=89.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.++|+|||.+..+.... ........++..|++|| .......+.++|+||+|+++|++++ |..||...
T Consensus       130 ~~Nill~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~~y~~Pe-~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~  207 (260)
T cd05069         130 AANILVGDNLVCKIADFGLARLIEDNE-YTARQGAKFPIKWTAPE-AALYGRFTIKSDVWSFGILLTELVTKGRVPYPGM  207 (260)
T ss_pred             cceEEEcCCCeEEECCCccceEccCCc-ccccCCCccchhhCCHH-HhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            689999999999999999987652211 11112233567799995 4445667889999999999999998 88888643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSK  151 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~  151 (164)
                      ....  ...           .+.. ..      ....+...+..+.+++.+||..||++||++.++++.|++
T Consensus       208 ~~~~--~~~-----------~~~~-~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         208 VNRE--VLE-----------QVER-GY------RMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             CHHH--HHH-----------HHHc-CC------CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            2111  000           0000 00      001122345668999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.85  E-value=7.3e-21  Score=130.20  Aligned_cols=141  Identities=20%  Similarity=0.227  Sum_probs=89.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++. +.+||+|||.++.+....   ......++..|++||.+.....++.++|+||+||++|++++|..||....
T Consensus       128 p~ni~l~~-~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~  203 (282)
T cd07831         128 PENILIKD-DILKLADFGSCRGIYSKP---PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTN  203 (282)
T ss_pred             HHHEEEcC-CCeEEEecccccccccCC---CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCC
Confidence            67999999 999999999987653221   11234578899999766555567889999999999999999999996432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcc---ccc-------chhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLL---TRE-------DRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .  ......+.................   ...       ..........+..+.+++.+||+.+|++|||++++++
T Consensus       204 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~  278 (282)
T cd07831         204 E--LDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR  278 (282)
T ss_pred             H--HHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence            2  111111111111111111000000   000       0001111245677999999999999999999999886

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.84  E-value=2.9e-21  Score=131.69  Aligned_cols=131  Identities=20%  Similarity=0.353  Sum_probs=89.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.+|++|||+++.+.............++..|++|| ......++.++|+||+|+++|++++ |..||...
T Consensus       141 p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe-~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~  219 (273)
T cd05074         141 ARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALE-SLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGV  219 (273)
T ss_pred             hhhEEEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHh-HHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCC
Confidence            689999999999999999988653222121222334567789995 4445557789999999999999998 78887532


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI  152 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~  152 (164)
                      ..  ......            ......      ...+...+..+.+++.+||+.+|++|||+.++++.|+.+
T Consensus       220 ~~--~~~~~~------------~~~~~~------~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         220 EN--SEIYNY------------LIKGNR------LKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             CH--HHHHHH------------HHcCCc------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            11  111100            000000      001122345689999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.84  E-value=1.5e-21  Score=136.31  Aligned_cols=123  Identities=23%  Similarity=0.312  Sum_probs=86.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||+++......  .......|++.|+|||.+ ....++.++||||+|+++|+|++|..||....
T Consensus       128 p~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~G~~pf~~~~  204 (323)
T cd05584         128 PENILLDAQGHVKLTDFGLCKESIHEG--TVTHTFCGTIEYMAPEIL-MRSGHGKAVDWWSLGALMYDMLTGAPPFTAEN  204 (323)
T ss_pred             HHHeEECCCCCEEEeeCcCCeecccCC--CcccccCCCccccChhhc-cCCCCCCcceecccHHHHHHHhcCCCCCCCCC
Confidence            689999999999999999987532111  122334688999999554 45557889999999999999999999996421


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCC-----CHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRI-----NAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~vl~  147 (164)
                      ...     .        ...+....        ...+..++..+.+++.+||+.+|++||     ++.++++
T Consensus       205 ~~~-----~--------~~~~~~~~--------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~  255 (323)
T cd05584         205 RKK-----T--------IDKILKGK--------LNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS  255 (323)
T ss_pred             HHH-----H--------HHHHHcCC--------CCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence            100     0        00111100        111233456688999999999999999     7887766

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.84  E-value=2.7e-21  Score=132.80  Aligned_cols=129  Identities=29%  Similarity=0.383  Sum_probs=87.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhcc--CcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGRE--GRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~--~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+||+++.++.++|+|||+++.+...   .......++..|++||.+...  ..++.++|+||+|+++|++++|..||..
T Consensus       136 p~Nil~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~  212 (288)
T cd06616         136 PSNILLDRNGNIKLCDFGISGQLVDS---IAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPK  212 (288)
T ss_pred             HHHEEEccCCcEEEeecchhHHhccC---CccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchh
Confidence            67999999999999999998765221   112334578889999665444  3578899999999999999999999864


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ...    ....        ........   ........+..++..+.+++.+||+.+|++|||+++++.
T Consensus       213 ~~~----~~~~--------~~~~~~~~---~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~  266 (288)
T cd06616         213 WNS----VFDQ--------LTQVVKGD---PPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLE  266 (288)
T ss_pred             cch----HHHH--------HhhhcCCC---CCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            210    0000        00100000   000011111235666899999999999999999999887

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.84  E-value=1.8e-21  Score=135.43  Aligned_cols=123  Identities=21%  Similarity=0.309  Sum_probs=85.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||+++......  .......|+..|+|||.+ ....++.++|+||+||++|+|++|..||....
T Consensus       124 p~Nill~~~~~~kL~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~  200 (316)
T cd05592         124 LDNVLLDKDGHIKIADFGMCKENMNGE--GKASTFCGTPDYIAPEIL-KGQKYNESVDWWSFGVLLYEMLIGQSPFHGED  200 (316)
T ss_pred             HHHeEECCCCCEEEccCcCCeECCCCC--CccccccCCccccCHHHH-cCCCCCCcccchhHHHHHHHHHhCCCCCCCCC
Confidence            689999999999999999987642211  223345689999999544 45567889999999999999999999997432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHH-HHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAK-EIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~-~vl~  147 (164)
                      ...  .   ..        .+.. .   .    ...+..++..+.+++.+||+.||++||++. ++++
T Consensus       201 ~~~--~---~~--------~i~~-~---~----~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05592         201 EDE--L---FD--------SILN-D---R----PHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQ  247 (316)
T ss_pred             HHH--H---HH--------HHHc-C---C----CCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence            111  0   00        0000 0   0    011223455688999999999999999875 4543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.84  E-value=3e-21  Score=140.81  Aligned_cols=129  Identities=22%  Similarity=0.383  Sum_probs=97.6

Q ss_pred             cceEecCCceEEEeccccceeccCC-CCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            2 SNVLLDDNMVAHLSDFGIAKLLIGE-DQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         2 ~Nill~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      .|+|+...-.+||+|||+.|.+... ..+.......-+..|.|| |.+....|+.++|+|+||+.+|||++ |.-||.+.
T Consensus       241 RNlllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaP-EsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~  319 (1039)
T KOG0199|consen  241 RNLLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAP-ESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGC  319 (1039)
T ss_pred             hhheecccceeeeecccceeccCCCCcceEecCCCcCcccccCH-hHhccccccccchhhhhhhhHHhhhccCCCCCCCC
Confidence            5899988889999999999987533 333344445567899999 66667789999999999999999997 77888653


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSK  151 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~  151 (164)
                      ....              ..+.++      ...+.+.+..|+.+++++|+.||..+|.+|||+.++.+.+-.
T Consensus       320 ~g~q--------------IL~~iD------~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~l  371 (1039)
T KOG0199|consen  320 RGIQ--------------ILKNID------AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVL  371 (1039)
T ss_pred             CHHH--------------HHHhcc------ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHH
Confidence            2111              111121      233455678899999999999999999999999999865443

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.84  E-value=5.1e-21  Score=129.22  Aligned_cols=124  Identities=22%  Similarity=0.346  Sum_probs=87.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.+..+...  ........++..|++|| +.....++.++|+||+|++++++++|..||....
T Consensus       129 ~~nili~~~~~~~l~df~~~~~~~~~--~~~~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  205 (256)
T cd08529         129 SLNLFLDAYDNVKIGDLGVAKLLSDN--TNFANTIVGTPYYLSPE-LCEDKPYNEKSDVWALGVVLYECCTGKHPFDANN  205 (256)
T ss_pred             cceEEEeCCCCEEEcccccceeccCc--cchhhccccCccccCHH-HhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Confidence            68999999999999999998765321  11222345778899995 4445557889999999999999999999986432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ...  ..           .......       ....+..++..+.+++.+||+.+|++||++.++++
T Consensus       206 ~~~--~~-----------~~~~~~~-------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~  252 (256)
T cd08529         206 QGA--LI-----------LKIIRGV-------FPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLR  252 (256)
T ss_pred             HHH--HH-----------HHHHcCC-------CCCCccccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence            110  00           0001000       00111234556899999999999999999999886

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.84  E-value=7e-22  Score=138.35  Aligned_cols=129  Identities=23%  Similarity=0.276  Sum_probs=87.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||+++.+..... .......|+..|+|||.+.....++.++||||+||++|+|++|..||....
T Consensus       133 p~Nili~~~~~~kl~DfG~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~  211 (332)
T cd05614         133 LENILLDSEGHVVLTDFGLSKEFLSEEK-ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEG  211 (332)
T ss_pred             HHHeEECCCCCEEEeeCcCCccccccCC-CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCC
Confidence            6899999999999999999876422111 112234689999999666544457788999999999999999999996432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCC-----CHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRI-----NAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~vl~  147 (164)
                      .... ......        .+..    ..    ...+..++..+.+++.+||+.||++||     +++++++
T Consensus       212 ~~~~-~~~~~~--------~~~~----~~----~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~  266 (332)
T cd05614         212 ERNT-QSEVSR--------RILK----CD----PPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE  266 (332)
T ss_pred             CCCC-HHHHHH--------HHhc----CC----CCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence            2111 000000        0000    00    011223455688999999999999999     6777765

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.84  E-value=1.9e-21  Score=135.78  Aligned_cols=123  Identities=20%  Similarity=0.293  Sum_probs=85.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||+++.....  ........|++.|+|||.+ ....++.++|+||+||++|++++|..||....
T Consensus       129 p~Nill~~~~~~kL~Dfg~~~~~~~~--~~~~~~~~g~~~y~aPE~~-~~~~~~~~~DiwslG~il~el~~G~~pf~~~~  205 (324)
T cd05589         129 LDNLLLDTEGFVKIADFGLCKEGMGF--GDRTSTFCGTPEFLAPEVL-TETSYTRAVDWWGLGVLIYEMLVGESPFPGDD  205 (324)
T ss_pred             HHHeEECCCCcEEeCcccCCccCCCC--CCcccccccCccccCHhHh-cCCCCCcccchhhHHHHHHHHHhCCCCCCCCC
Confidence            68999999999999999998653211  1122345688999999544 45667889999999999999999999996421


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCC-----CHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRI-----NAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~vl~  147 (164)
                      ...  .   .        ..+....        ...+..++..+.+++.+||+.||.+||     ++.++++
T Consensus       206 ~~~--~---~--------~~i~~~~--------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~  256 (324)
T cd05589         206 EEE--V---F--------DSIVNDE--------VRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK  256 (324)
T ss_pred             HHH--H---H--------HHHHhCC--------CCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence            110  0   0        0011100        011223456688999999999999999     4556554

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.84  E-value=1.2e-20  Score=136.79  Aligned_cols=146  Identities=18%  Similarity=0.133  Sum_probs=88.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.++|+|||+++.+.............|+..|++||.+ .+..++.++|||||||++|++++|..++....
T Consensus       288 P~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~-~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~  366 (461)
T PHA03211        288 TENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVL-AGDPYTPSVDIWSAGLVIFEAAVHTASLFSAS  366 (461)
T ss_pred             HHHEEECCCCCEEEcccCCceecccccccccccccCCCcCCcCHHHH-cCCCCCchHHHHHHHHHHHHHHHcCCCcccCC
Confidence            68999999999999999999865322222122234689999999554 45668889999999999999998876543321


Q ss_pred             cC------chhHHHHHHHhhh--hh--------hHHHhhhhccc-----ccchhhhhHHHHHHHHHHHHhhccccCccCC
Q 039452           81 SG------EMTLKRWINDLLS--VS--------VMEVVDANLLT-----REDRHFAAKQQCVSFVFNLAMECTIESPERR  139 (164)
Q Consensus        81 ~~------~~~~~~~~~~~~~--~~--------~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  139 (164)
                      ..      ...+...+.....  ..        +..........     ...............+.+++.+||+.||.+|
T Consensus       367 ~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~R  446 (461)
T PHA03211        367 RGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARR  446 (461)
T ss_pred             cccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhC
Confidence            11      1111111111000  00        00000000000     0000011111234568899999999999999


Q ss_pred             CCHHHHHH
Q 039452          140 INAKEIVT  147 (164)
Q Consensus       140 ps~~~vl~  147 (164)
                      ||+.++++
T Consensus       447 Psa~elL~  454 (461)
T PHA03211        447 PSAAELLR  454 (461)
T ss_pred             cCHHHHhh
Confidence            99999987

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.84  E-value=1.1e-20  Score=127.75  Aligned_cols=131  Identities=26%  Similarity=0.373  Sum_probs=89.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.+..+  ...........++..|.|||.+......+.++|+||+|+++++|++|..||... 
T Consensus       126 p~NIl~~~~~~~~l~Dfg~~~~~--~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~-  202 (260)
T PF00069_consen  126 PENILLDENGEVKLIDFGSSVKL--SENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEES-  202 (260)
T ss_dssp             GGGEEESTTSEEEESSGTTTEES--TSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTS-
T ss_pred             ccccccccccccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccc-
Confidence            68999999999999999998764  122223345667889999965543677889999999999999999999998754 


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                       .................            .............+.+++.+||+.||++|||+.++++
T Consensus       203 -~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~  256 (260)
T PF00069_consen  203 -NSDDQLEIIEKILKRPL------------PSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLK  256 (260)
T ss_dssp             -SHHHHHHHHHHHHHTHH------------HHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred             -cchhhhhhhhhcccccc------------cccccccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence             11111111111100000            0000000111256899999999999999999999875

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.84  E-value=5.8e-21  Score=128.97  Aligned_cols=126  Identities=21%  Similarity=0.352  Sum_probs=87.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.+.......  .......++..|++||. ..+..++.++|+||+|+++|++++|..||....
T Consensus       127 ~~ni~~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~~PE~-~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~  203 (256)
T cd06612         127 AGNILLNEEGQAKLADFGVSGQLTDTM--AKRNTVIGTPFWMAPEV-IQEIGYNNKADIWSLGITAIEMAEGKPPYSDIH  203 (256)
T ss_pred             cceEEECCCCcEEEcccccchhcccCc--cccccccCCccccCHHH-HhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcc
Confidence            689999999999999999987652211  12233457788999954 455567889999999999999999999986432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ......             . ..    .........+..++..+.+++.+||+.||++|||++++++
T Consensus       204 ~~~~~~-------------~-~~----~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~  252 (256)
T cd06612         204 PMRAIF-------------M-IP----NKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ  252 (256)
T ss_pred             hhhhhh-------------h-hc----cCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence            111000             0 00    0001111122334566899999999999999999999886

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.84  E-value=1.4e-21  Score=136.30  Aligned_cols=123  Identities=20%  Similarity=0.276  Sum_probs=86.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||++.....  .........|+..|+||| +.....++.++|+||+||++|++++|..||....
T Consensus       124 p~Nill~~~~~~kL~Dfg~~~~~~~--~~~~~~~~~gt~~y~aPE-~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~  200 (321)
T cd05591         124 LDNILLDAEGHCKLADFGMCKEGIL--NGVTTTTFCGTPDYIAPE-ILQELEYGPSVDWWALGVLMYEMMAGQPPFEADN  200 (321)
T ss_pred             HHHeEECCCCCEEEeecccceeccc--CCccccccccCccccCHH-HHcCCCCCCccceechhHHHHHHhcCCCCCCCCC
Confidence            6899999999999999999875321  112223456889999995 4455668889999999999999999999997432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCC-------CHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRI-------NAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-------s~~~vl~  147 (164)
                      ...  ..           ..+....        ...+..++.++.+++.+||+.||++|+       ++.++++
T Consensus       201 ~~~--~~-----------~~i~~~~--------~~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~  253 (321)
T cd05591         201 EDD--LF-----------ESILHDD--------VLYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ  253 (321)
T ss_pred             HHH--HH-----------HHHHcCC--------CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence            111  00           0111100        001122455688999999999999999       7777764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.84  E-value=9.3e-21  Score=128.36  Aligned_cols=129  Identities=19%  Similarity=0.334  Sum_probs=87.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhcc--CcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGRE--GRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~--~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+||+++.++.++|+|||.+......  ........++..|++||.+...  ..++.++|+||+|+++|+|++|..||..
T Consensus       129 p~ni~i~~~~~~~l~d~g~~~~~~~~--~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~  206 (262)
T cd06613         129 GANILLTEDGDVKLADFGVSAQLTAT--IAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFD  206 (262)
T ss_pred             hhhEEECCCCCEEECccccchhhhhh--hhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCC
Confidence            68999999999999999998765221  1122234577889999554322  2577889999999999999999999864


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ........             . ......  ...........+..+.+++.+||..+|..|||+++++.
T Consensus       207 ~~~~~~~~-------------~-~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  259 (262)
T cd06613         207 LHPMRALF-------------L-ISKSNF--PPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ  259 (262)
T ss_pred             CCHHHHHH-------------H-HHhccC--CCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            32111100             0 000000  00111122344566899999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.84  E-value=3.1e-22  Score=133.74  Aligned_cols=125  Identities=26%  Similarity=0.404  Sum_probs=98.9

Q ss_pred             cceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcccc
Q 039452            2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMFS   81 (164)
Q Consensus         2 ~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~~   81 (164)
                      .|||++.+|..||+|||.+..+  ...-......+||+.|+|| +++..-.++..+||||+|+...||..|++||.+..+
T Consensus       158 GNILLNT~G~AKLADFGVAGQL--TDTMAKRNTVIGTPFWMAP-EVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHP  234 (502)
T KOG0574|consen  158 GNILLNTDGIAKLADFGVAGQL--TDTMAKRNTVIGTPFWMAP-EVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHP  234 (502)
T ss_pred             ccEEEcccchhhhhhccccchh--hhhHHhhCccccCcccccH-HHHHHhccchhhhHhhhcchhhhhhcCCCCcccccc
Confidence            5999999999999999999876  2222233457899999999 555666688999999999999999999999987655


Q ss_pred             CchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           82 GEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .+..+.                  +.+..++.+..|+..+.++.+++++||..+|++|.|+-++++
T Consensus       235 MRAIFM------------------IPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~  282 (502)
T KOG0574|consen  235 MRAIFM------------------IPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCE  282 (502)
T ss_pred             cceeEe------------------ccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence            432111                  112344455667888999999999999999999999988876

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.84  E-value=4.3e-21  Score=129.75  Aligned_cols=127  Identities=20%  Similarity=0.416  Sum_probs=85.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.++|+|||.++..... .........++..|+|||.+ ....++.++|+||+|+++|++++ |..||...
T Consensus       128 p~ni~i~~~~~~kl~d~g~~~~~~~~-~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~  205 (256)
T cd05114         128 ARNCLVSSTGVVKVSDFGMTRYVLDD-EYTSSSGAKFPVKWSPPEVF-NFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKK  205 (256)
T ss_pred             cceEEEcCCCeEEECCCCCccccCCC-ceeccCCCCCchhhCChhhc-ccCccchhhhhHHHHHHHHHHHcCCCCCCCCC
Confidence            68999999999999999988764211 11111222345679999554 45567889999999999999999 88898643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTEL  149 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l  149 (164)
                      ..  ......            +....   .   ...+...+..+.+++.+||..+|.+|||++++++.|
T Consensus       206 ~~--~~~~~~------------i~~~~---~---~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l  255 (256)
T cd05114         206 SN--YEVVEM------------ISRGF---R---LYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI  255 (256)
T ss_pred             CH--HHHHHH------------HHCCC---C---CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence            21  111100            00000   0   001112344588999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.84  E-value=1.5e-21  Score=129.42  Aligned_cols=112  Identities=21%  Similarity=0.289  Sum_probs=84.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||+|.+|++||+|||+|..+.+     ......||+.|+|| +++....++.++|-|+||++.|||+.|.+||....
T Consensus       172 PENiLlD~~G~iKitDFGFAK~v~~-----rT~TlCGTPeYLAP-Eii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~  245 (355)
T KOG0616|consen  172 PENLLLDQNGHIKITDFGFAKRVSG-----RTWTLCGTPEYLAP-EIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDN  245 (355)
T ss_pred             hHHeeeccCCcEEEEeccceEEecC-----cEEEecCCccccCh-HHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCC
Confidence            7999999999999999999988622     23456799999999 66667779999999999999999999999997543


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCC
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERR  139 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  139 (164)
                      +  +..           ..+++...        ...|...++++.+|+.+.|+.|-.+|
T Consensus       246 ~--~~i-----------Y~KI~~~~--------v~fP~~fs~~~kdLl~~LL~vD~t~R  283 (355)
T KOG0616|consen  246 P--IQI-----------YEKILEGK--------VKFPSYFSSDAKDLLKKLLQVDLTKR  283 (355)
T ss_pred             h--HHH-----------HHHHHhCc--------ccCCcccCHHHHHHHHHHHhhhhHhh
Confidence            3  111           11111111        11234445568889999999998888

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.84  E-value=2.9e-21  Score=131.56  Aligned_cols=126  Identities=18%  Similarity=0.253  Sum_probs=86.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhc----cCcccCccchHhHHHHHHHHHhcCCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGR----EGRVSTNGDVYSFGIMLMEAFTRKKPT   76 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~----~~~~~~~~Di~s~g~~~~~~~~g~~p~   76 (164)
                      |+||+++.++.++|+|||++.....  .........++..|++||.+..    ...++.++|+||+||++|++++|..||
T Consensus       139 ~~nili~~~~~~~l~Dfg~~~~~~~--~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~  216 (272)
T cd06637         139 GQNVLLTENAEVKLVDFGVSAQLDR--TVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL  216 (272)
T ss_pred             HHHEEECCCCCEEEccCCCceeccc--ccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence            5799999999999999999876521  1112234567889999966532    234677899999999999999999998


Q ss_pred             CccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           77 DEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ..........             ....      ..........++..+.+++.+||..+|.+|||++++++
T Consensus       217 ~~~~~~~~~~-------------~~~~------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  268 (272)
T cd06637         217 CDMHPMRALF-------------LIPR------NPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK  268 (272)
T ss_pred             cccCHHHHHH-------------HHhc------CCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence            6432111000             0000      00000111234456889999999999999999999875

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.84  E-value=5.6e-21  Score=129.97  Aligned_cols=131  Identities=24%  Similarity=0.473  Sum_probs=88.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccc-cccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMT-QTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~   78 (164)
                      |+||+++.++.++++|||++..+........ ......+..|++||.+ ....++.++|+||+|+++|++++ |..||..
T Consensus       135 p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~-~~~~~~~~~Dv~slG~il~ell~~g~~p~~~  213 (268)
T cd05063         135 ARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAI-AYRKFTSASDVWSFGIVMWEVMSFGERPYWD  213 (268)
T ss_pred             hhhEEEcCCCcEEECCCccceecccccccceeccCCCcCceecCHHHh-hcCCcChHhHHHHHHHHHHHHHhCCCCCCCc
Confidence            6899999999999999999876532111111 1112234579999544 45567889999999999999987 9999853


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI  152 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~  152 (164)
                      ....  ...            ..+....      ..+.+..++..+.+++.+||..+|++||++.++++.|.++
T Consensus       214 ~~~~--~~~------------~~i~~~~------~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         214 MSNH--EVM------------KAINDGF------RLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             CCHH--HHH------------HHHhcCC------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            2111  010            1111110      0011123455688999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.84  E-value=1.7e-21  Score=136.00  Aligned_cols=123  Identities=20%  Similarity=0.264  Sum_probs=86.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||++.....  .........|++.|+|||.+ ....++.++|+||+||++|++++|..||....
T Consensus       123 p~NIll~~~~~~kL~Dfg~~~~~~~--~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~  199 (323)
T cd05595         123 LENLMLDKDGHIKITDFGLCKEGIS--DGATMKTFCGTPEYLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD  199 (323)
T ss_pred             HHHEEEcCCCCEEecccHHhccccC--CCCccccccCCcCcCCcccc-cCCCCCchhchhhhHHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999875321  11122335688999999554 45567889999999999999999999986421


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCC-----CHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRI-----NAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~vl~  147 (164)
                      ...  ..           ..+....        ...+..+++.+.+++.+||+.||.+|+     ++.++++
T Consensus       200 ~~~--~~-----------~~~~~~~--------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~  250 (323)
T cd05595         200 HER--LF-----------ELILMEE--------IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  250 (323)
T ss_pred             HHH--HH-----------HHHhcCC--------CCCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence            111  00           0000000        011233456688999999999999998     7888765

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.84  E-value=2.3e-21  Score=140.54  Aligned_cols=117  Identities=22%  Similarity=0.296  Sum_probs=89.3

Q ss_pred             cceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcccc
Q 039452            2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMFS   81 (164)
Q Consensus         2 ~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~~   81 (164)
                      +|||+|..|++||+|||+++...+  .-...++..||+.|+|| +++....|+.++|.|+||+++|+|+.|+.||.+...
T Consensus       497 dNiLLD~eGh~kiADFGlcKe~m~--~g~~TsTfCGTpey~aP-Eil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddE  573 (694)
T KOG0694|consen  497 DNLLLDTEGHVKIADFGLCKEGMG--QGDRTSTFCGTPEFLAP-EVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDE  573 (694)
T ss_pred             hheEEcccCcEEecccccccccCC--CCCccccccCChhhcCh-hhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCH
Confidence            699999999999999999987432  22245667899999999 777788899999999999999999999999975321


Q ss_pred             CchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCH
Q 039452           82 GEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINA  142 (164)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  142 (164)
                      .                 ++.+......    ...|..++.++.++|.++|..||++|..+
T Consensus       574 e-----------------e~FdsI~~d~----~~yP~~ls~ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  574 E-----------------EVFDSIVNDE----VRYPRFLSKEAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             H-----------------HHHHHHhcCC----CCCCCcccHHHHHHHHHHhccCcccccCC
Confidence            1                 1222222111    11244566778999999999999999854

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.84  E-value=1.2e-21  Score=137.01  Aligned_cols=127  Identities=19%  Similarity=0.246  Sum_probs=83.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||+++......  .......|+..|+|||.+ ....++.++|+||+||++|++++|..||....
T Consensus       124 p~Nili~~~~~~kL~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~  200 (329)
T cd05618         124 LDNVLLDSEGHIKLTDYGMCKEGLRPG--DTTSTFCGTPNYIAPEIL-RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVG  200 (329)
T ss_pred             HHHEEECCCCCEEEeeCCccccccCCC--CccccccCCccccCHHHH-cCCCCCCccceecccHHHHHHhhCCCCCccCC
Confidence            689999999999999999987532111  122345689999999544 45667889999999999999999999996432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINA  142 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  142 (164)
                      .........     .......+...       ....+..++..+.+++.+||+.||++|||+
T Consensus       201 ~~~~~~~~~-----~~~~~~~i~~~-------~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~  250 (329)
T cd05618         201 SSDNPDQNT-----EDYLFQVILEK-------QIRIPRSLSVKAASVLKSFLNKDPKERLGC  250 (329)
T ss_pred             CcCCccccc-----HHHHHHHHhcC-------CCCCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence            211100000     00000101000       011223345568899999999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.84  E-value=4.5e-22  Score=130.48  Aligned_cols=130  Identities=25%  Similarity=0.272  Sum_probs=91.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCc-ccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGR-VSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~-~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+|||++..|.+||+|||.+..+.   .....+...|...|+|||.+..... ++.++|+||+|+.++|+.+|..|+...
T Consensus       196 PSNILldr~G~vKLCDFGIcGqLv---~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w  272 (361)
T KOG1006|consen  196 PSNILLDRHGDVKLCDFGICGQLV---DSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKW  272 (361)
T ss_pred             hhheEEecCCCEeeecccchHhHH---HHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchH
Confidence            799999999999999999998762   2334456678999999987754444 889999999999999999999998753


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .+.-.++.+.    ..+..+.+.          ........+..+..++..|+..|-++||...++++
T Consensus       273 ~svfeql~~V----v~gdpp~l~----------~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~  326 (361)
T KOG1006|consen  273 DSVFEQLCQV----VIGDPPILL----------FDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK  326 (361)
T ss_pred             HHHHHHHHHH----HcCCCCeec----------CcccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence            2211111111    001100000          00001123455889999999999999999998875

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.84  E-value=9.2e-21  Score=129.92  Aligned_cols=144  Identities=22%  Similarity=0.168  Sum_probs=87.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.+..+..  .........++..|++||.+......+.++|+||+|+++|++++|..||....
T Consensus       128 p~nill~~~~~~~l~dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~  205 (284)
T cd07860         128 PQNLLINTEGAIKLADFGLARAFGV--PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS  205 (284)
T ss_pred             HHHEEECCCCCEEEeeccchhhccc--CccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence            6799999999999999999876421  11122333467889999665544446788999999999999999999986422


Q ss_pred             cCchhHHHHHHHhhhh--h-------hHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSV--S-------VMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~--~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ... ...+........  .       ......................++..+.+++.+||+.||++|||+++++.
T Consensus       206 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  280 (284)
T cd07860         206 EID-QLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA  280 (284)
T ss_pred             HHH-HHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence            111 111111100000  0       00000000000000001111234566889999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.84  E-value=8e-21  Score=130.30  Aligned_cols=144  Identities=22%  Similarity=0.251  Sum_probs=90.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||++..+....  .......++..|++||.......++.++|+||+|+++|++++|..||....
T Consensus       128 p~ni~~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~  205 (286)
T cd07846         128 PENILVSQSGVVKLCDFGFARTLAAPG--EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDS  205 (286)
T ss_pred             HHHEEECCCCcEEEEeeeeeeeccCCc--cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCc
Confidence            689999999999999999987653222  222334578899999766544557788999999999999999998886432


Q ss_pred             cCchhHHHHHHHhh--hhhhHHHh------hhhcc---cccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLL--SVSVMEVV------DANLL---TREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~--~~~~~~~~------~~~~~---~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ... ..........  ........      .....   ..........+.++..+.+++.+||+.+|++||+++++++
T Consensus       206 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  282 (286)
T cd07846         206 DID-QLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH  282 (286)
T ss_pred             hHH-HHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence            111 1111000000  00000000      00000   0001111112345677999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.84  E-value=6.9e-21  Score=130.30  Aligned_cols=134  Identities=24%  Similarity=0.392  Sum_probs=92.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||.++.+.............++..|++||.. ....++.++|+||+|+++|++++ |..||...
T Consensus       137 p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~-~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~  215 (279)
T cd05057         137 ARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESI-LHRIYTHKSDVWSYGVTVWELMTFGAKPYEGI  215 (279)
T ss_pred             cceEEEcCCCeEEECCCcccccccCcccceecCCCcccccccCHHHh-hcCCcCchhhHHHHHHHHHHHhcCCCCCCCCC
Confidence            68999999999999999999875322221111122235679999544 45567889999999999999998 99998643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDS  155 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~  155 (164)
                      ....  ..            ..+....      ....+..++..+.+++.+||..+|.+|||+.++++.|.++.+.
T Consensus       216 ~~~~--~~------------~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~  271 (279)
T cd05057         216 PAVE--IP------------DLLEKGE------RLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARD  271 (279)
T ss_pred             CHHH--HH------------HHHhCCC------CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence            2111  11            1111110      0111222344578999999999999999999999999988653

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.84  E-value=8.5e-21  Score=133.15  Aligned_cols=147  Identities=22%  Similarity=0.240  Sum_probs=92.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc---cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS---MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      |+||+++.++.+||+|||.+..+......   .......++..|++||.+.....++.++|+||+|+++|++++|+.||.
T Consensus       135 p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~  214 (337)
T cd07852         135 PSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFP  214 (337)
T ss_pred             HHHEEEcCCCcEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCC
Confidence            68999999999999999998765322211   122334678899999766555567889999999999999999999986


Q ss_pred             ccccCchhHHHHHHHh-----------hhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHH
Q 039452           78 EMFSGEMTLKRWINDL-----------LSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIV  146 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl  146 (164)
                      ....... ........           .......++.................++..+.+++.+||+.||++|||+.+++
T Consensus       215 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il  293 (337)
T cd07852         215 GTSTLNQ-LEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEAL  293 (337)
T ss_pred             CCChHHH-HHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHh
Confidence            4322111 11110000           00000111111100111111111123567789999999999999999999999


Q ss_pred             HH
Q 039452          147 TE  148 (164)
Q Consensus       147 ~~  148 (164)
                      +.
T Consensus       294 ~~  295 (337)
T cd07852         294 EH  295 (337)
T ss_pred             hC
Confidence            73

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.84  E-value=1.9e-21  Score=135.74  Aligned_cols=118  Identities=20%  Similarity=0.281  Sum_probs=82.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||+++....  .........|++.|+|||. .....++.++|+||+||++|+|++|..||....
T Consensus       129 p~Nill~~~~~~kL~DfG~~~~~~~--~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~  205 (323)
T cd05616         129 LDNVMLDSEGHIKIADFGMCKENMW--DGVTTKTFCGTPDYIAPEI-IAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED  205 (323)
T ss_pred             HHHeEECCCCcEEEccCCCceecCC--CCCccccCCCChhhcCHHH-hcCCCCCCccchhchhHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999875311  1112234568899999954 445668899999999999999999999997432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINA  142 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  142 (164)
                      .  .....           .+....        ...+...+..+.+++.+||+.||.+|++.
T Consensus       206 ~--~~~~~-----------~i~~~~--------~~~p~~~s~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05616         206 E--DELFQ-----------SIMEHN--------VAYPKSMSKEAVAICKGLMTKHPGKRLGC  246 (323)
T ss_pred             H--HHHHH-----------HHHhCC--------CCCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence            1  11110           011000        01122345568899999999999999984

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.84  E-value=2.2e-21  Score=135.08  Aligned_cols=122  Identities=20%  Similarity=0.207  Sum_probs=84.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.++|+|||+++...  ..........|+..|+|||. .....++.++|+||+||++|++++|..||....
T Consensus       124 p~Nil~~~~~~~kl~Dfg~~~~~~--~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~  200 (316)
T cd05620         124 LDNVMLDRDGHIKIADFGMCKENV--FGDNRASTFCGTPDYIAPEI-LQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDD  200 (316)
T ss_pred             HHHeEECCCCCEEeCccCCCeecc--cCCCceeccCCCcCccCHHH-HcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC
Confidence            689999999999999999986531  11112234568999999954 445568889999999999999999999996431


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHH-HHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAK-EIV  146 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~-~vl  146 (164)
                      .  ....            +.+....       ...+..++.++.+++.+||+.||++|+++. +++
T Consensus       201 ~--~~~~------------~~~~~~~-------~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~  246 (316)
T cd05620         201 E--DELF------------ESIRVDT-------PHYPRWITKESKDILEKLFERDPTRRLGVVGNIR  246 (316)
T ss_pred             H--HHHH------------HHHHhCC-------CCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence            1  1100            0010000       011123455688999999999999999974 554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.84  E-value=9.8e-21  Score=132.80  Aligned_cols=146  Identities=21%  Similarity=0.211  Sum_probs=91.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc-cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS-MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+||+++.++.++|+|||++......... .......++..|+|||.+.....++.++|+||+|+++|++++|+.||...
T Consensus       134 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~  213 (336)
T cd07849         134 PSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGK  213 (336)
T ss_pred             HHHEEECCCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            57999999999999999998765221111 11223457889999976655556788999999999999999999998642


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhc------------ccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANL------------LTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .  .......+.........+......            ...........+..+..+.+++.+||+.+|++|||+.++++
T Consensus       214 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~  291 (336)
T cd07849         214 D--YLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALA  291 (336)
T ss_pred             C--HHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            1  111111111111111111111000            00000000011233566889999999999999999999987


Q ss_pred             H
Q 039452          148 E  148 (164)
Q Consensus       148 ~  148 (164)
                      .
T Consensus       292 h  292 (336)
T cd07849         292 H  292 (336)
T ss_pred             C
Confidence            4

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.84  E-value=5e-21  Score=132.12  Aligned_cols=126  Identities=20%  Similarity=0.263  Sum_probs=87.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.+......  ........+++.|++|| ......++.++|+||||+++|++++|..||....
T Consensus       144 p~Nill~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE-~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~  220 (296)
T cd06654         144 SDNILLGMDGSVKLTDFGFCAQITPE--QSKRSTMVGTPYWMAPE-VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN  220 (296)
T ss_pred             HHHEEEcCCCCEEECccccchhcccc--ccccCcccCCccccCHH-HHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Confidence            68999999999999999988764211  11122345788999995 4445567889999999999999999999996432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ......             ....     ........+...+..+.+++.+||..+|.+|||+++++.
T Consensus       221 ~~~~~~-------------~~~~-----~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~  269 (296)
T cd06654         221 PLRALY-------------LIAT-----NGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (296)
T ss_pred             HHHhHH-------------HHhc-----CCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence            111000             0000     000111112334556889999999999999999999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.84  E-value=1.1e-20  Score=132.45  Aligned_cols=145  Identities=21%  Similarity=0.205  Sum_probs=92.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc--cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS--MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+||+++.++.+||+|||.+.........  .......++..|++||.+.....++.++|+||+|+++|++++|..||..
T Consensus       135 p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~  214 (334)
T cd07855         135 PSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPG  214 (334)
T ss_pred             HHHEEEcCCCcEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCC
Confidence            67999999999999999998765322211  1112346788999997665545578899999999999999999999964


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhh------------hhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVD------------ANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIV  146 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl  146 (164)
                      .....  ....+.........+...            .................+..+.+++.+||+.+|++|||+++++
T Consensus       215 ~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l  292 (334)
T cd07855         215 KNYVH--QLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQAL  292 (334)
T ss_pred             CChHH--HHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence            32211  111111111111111111            0000000000111223467799999999999999999999988


Q ss_pred             H
Q 039452          147 T  147 (164)
Q Consensus       147 ~  147 (164)
                      .
T Consensus       293 ~  293 (334)
T cd07855         293 Q  293 (334)
T ss_pred             h
Confidence            7

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.84  E-value=5e-21  Score=130.20  Aligned_cols=130  Identities=22%  Similarity=0.366  Sum_probs=88.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.++++|||.+....... ........++..|+||| ......++.++|+||+||++|++++ |..||...
T Consensus       135 p~nili~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~  212 (266)
T cd05064         135 AHKVLVNSDLVCKISGFRRLQEDKSEA-IYTTMSGKSPVLWAAPE-AIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDM  212 (266)
T ss_pred             HhhEEEcCCCcEEECCCcccccccccc-hhcccCCCCceeecCHH-HHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcC
Confidence            689999999999999999865431111 11111223456899995 4455668889999999999999775 99998643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI  152 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~  152 (164)
                      ....  ..            +.+....      ..+.+..++..+.+++..||+.+|++|||++++++.|..+
T Consensus       213 ~~~~--~~------------~~~~~~~------~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         213 SGQD--VI------------KAVEDGF------RLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             CHHH--HH------------HHHHCCC------CCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence            2111  00            1111110      0112334566689999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.84  E-value=5.8e-21  Score=133.81  Aligned_cols=73  Identities=29%  Similarity=0.499  Sum_probs=58.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+|||++.++.+||+|||++..+...    ......++..|+|||.+ .+..++.++|+||+||++|++++|..||..
T Consensus       132 p~Nili~~~~~~kL~Dfg~~~~~~~~----~~~~~~~~~~y~aPE~~-~~~~~~~~~DvwslG~il~~l~~g~~p~~~  204 (333)
T cd06650         132 PSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERL-QGTHYSVQSDIWSMGLSLVEMAIGRYPIPP  204 (333)
T ss_pred             hhhEEEcCCCCEEEeeCCcchhhhhh----ccccCCCCccccCHHHh-cCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence            68999999999999999998754211    12234578899999544 455678899999999999999999999864

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.84  E-value=2.4e-21  Score=133.43  Aligned_cols=120  Identities=21%  Similarity=0.276  Sum_probs=85.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||+++.+...     .....|++.|+|||. .....++.++||||+||++|++++|..||....
T Consensus       129 p~NIli~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~-~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~  202 (291)
T cd05612         129 PENILLDKEGHIKLTDFGFAKKLRDR-----TWTLCGTPEYLAPEV-IQSKGHNKAVDWWALGILIYEMLVGYPPFFDDN  202 (291)
T ss_pred             HHHeEECCCCCEEEEecCcchhccCC-----cccccCChhhcCHHH-HcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            68999999999999999998765221     123458899999954 445567889999999999999999999996432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCC-----HHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRIN-----AKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~vl~  147 (164)
                      ...  ..           ..+....        ...+...+..+.+++.+||+.||.+|++     ++++++
T Consensus       203 ~~~--~~-----------~~i~~~~--------~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~  253 (291)
T cd05612         203 PFG--IY-----------EKILAGK--------LEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN  253 (291)
T ss_pred             HHH--HH-----------HHHHhCC--------cCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence            111  00           0111100        0111223456889999999999999995     777765

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.84  E-value=7e-22  Score=137.99  Aligned_cols=123  Identities=21%  Similarity=0.287  Sum_probs=86.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||+++.....  ........|+..|+|||.+ ....++.++|+||+||++|++++|..||....
T Consensus       124 p~NIll~~~~~~kL~Dfg~~~~~~~~--~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~  200 (325)
T cd05594         124 LENLMLDKDGHIKITDFGLCKEGIKD--GATMKTFCGTPEYLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD  200 (325)
T ss_pred             CCeEEECCCCCEEEecCCCCeecCCC--CcccccccCCcccCCHHHH-ccCCCCCccccccccceeeeeccCCCCCCCCC
Confidence            78999999999999999998753211  1122234689999999544 45568899999999999999999999996421


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCC-----CHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRI-----NAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~vl~  147 (164)
                      ...  ..            ..+...   .    ...+...++.+.+++.+||+.||++|+     +++++++
T Consensus       201 ~~~--~~------------~~i~~~---~----~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~  251 (325)
T cd05594         201 HEK--LF------------ELILME---E----IRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ  251 (325)
T ss_pred             HHH--HH------------HHHhcC---C----CCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence            110  00            000000   0    011223455688999999999999997     8888875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.84  E-value=1.1e-20  Score=129.22  Aligned_cols=125  Identities=22%  Similarity=0.329  Sum_probs=88.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++++|||.+..+....  .......++..|++||.. ....++.++|+||+|+++|++++|..||....
T Consensus       129 p~Nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~apE~~-~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~  205 (277)
T cd06640         129 AANVLLSEQGDVKLADFGVAGQLTDTQ--IKRNTFVGTPFWMAPEVI-QQSAYDSKADIWSLGITAIELAKGEPPNSDMH  205 (277)
T ss_pred             hhhEEEcCCCCEEEcccccceeccCCc--cccccccCcccccCHhHh-ccCCCccHHHHHHHHHHHHHHHHCCCCCCCcC
Confidence            689999999999999999987653221  112234567889999544 45567889999999999999999999986432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTE  148 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  148 (164)
                      .....              .....      ......+..++..+.+++.+||+.+|++||++++++..
T Consensus       206 ~~~~~--------------~~~~~------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06640         206 PMRVL--------------FLIPK------NNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH  253 (277)
T ss_pred             hHhHh--------------hhhhc------CCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence            11100              00000      00111233456678899999999999999999999775

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.84  E-value=2.8e-21  Score=130.58  Aligned_cols=125  Identities=23%  Similarity=0.263  Sum_probs=87.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++++|||.+..+....  .......++..|++|| +......+.++|+||+|+++|++++|..||....
T Consensus       128 p~nili~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~~~aPE-~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~  204 (255)
T cd08219         128 SKNIFLTQNGKVKLGDFGSARLLTSPG--AYACTYVGTPYYVPPE-IWENMPYNNKSDIWSLGCILYELCTLKHPFQANS  204 (255)
T ss_pred             cceEEECCCCcEEEcccCcceeecccc--cccccccCCccccCHH-HHccCCcCchhhhhhhchhheehhhccCCCCCCC
Confidence            689999999999999999987753211  1222345788899995 4445567889999999999999999999986421


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTE  148 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  148 (164)
                      ...  .   .        ... ....      ....+..++..+.+++.+||+.||++|||+++++..
T Consensus       205 ~~~--~---~--------~~~-~~~~------~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         205 WKN--L---I--------LKV-CQGS------YKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             HHH--H---H--------HHH-hcCC------CCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            100  0   0        000 0000      001122345568899999999999999999998863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.84  E-value=4.4e-21  Score=131.44  Aligned_cols=127  Identities=22%  Similarity=0.276  Sum_probs=87.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.+..+....  .......+++.|++||.+ ....++.++|+||+|+++|++++|..||....
T Consensus       125 p~Nili~~~~~~~l~dfg~~~~~~~~~--~~~~~~~g~~~y~aPE~~-~~~~~~~~~DvwslG~il~el~~g~~pf~~~~  201 (280)
T cd05608         125 PENVLLDNDGNVRISDLGLAVELKDGQ--SKTKGYAGTPGFMAPELL-QGEEYDFSVDYFALGVTLYEMIAARGPFRARG  201 (280)
T ss_pred             HHHEEECCCCCEEEeeCccceecCCCC--ccccccCCCcCccCHHHh-cCCCCCccccHHHHHHHHHHHHhCCCCCCCCC
Confidence            679999999999999999987652211  122234688899999544 45667889999999999999999999996432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCC-----CHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRI-----NAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~vl~  147 (164)
                      ... ....            .......    .....+..++..+.+++.+||+.||++||     +++++++
T Consensus       202 ~~~-~~~~------------~~~~~~~----~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~  256 (280)
T cd05608         202 EKV-ENKE------------LKQRILN----DSVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT  256 (280)
T ss_pred             cch-hHHH------------HHHhhcc----cCCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence            111 0000            0000000    01112234556688999999999999999     6677775

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.84  E-value=5.4e-21  Score=129.30  Aligned_cols=127  Identities=26%  Similarity=0.465  Sum_probs=86.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||.++...... ........++..|++|| ......++.++|+||+|+++|++++ |..||...
T Consensus       128 p~ni~i~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~~y~~Pe-~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~  205 (256)
T cd05059         128 ARNCLVGEDNVVKVSDFGLARYVLDDQ-YTSSQGTKFPVKWAPPE-VFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERF  205 (256)
T ss_pred             HhhEEECCCCcEEECCcccceeccccc-ccccCCCCCCccccCHH-HhccCCCCchhhHHHHHHHHHHHhccCCCCCCCC
Confidence            689999999999999999987652111 11111122345799995 4445567889999999999999998 78888643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTEL  149 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l  149 (164)
                      ....  ..            ..+....      ....+..++..+.+++.+||..+|++|||+.++++.|
T Consensus       206 ~~~~--~~------------~~~~~~~------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         206 SNSE--VV------------ESVSAGY------RLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             CHHH--HH------------HHHHcCC------cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence            2111  00            0010000      0111223456689999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.84  E-value=7e-21  Score=130.43  Aligned_cols=144  Identities=22%  Similarity=0.200  Sum_probs=88.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.++.+...  ........++..|++||.+.....++.++|+||+|+++|++++|..||....
T Consensus       127 p~nil~~~~~~~~l~df~~~~~~~~~--~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~  204 (283)
T cd07835         127 PQNLLIDREGALKLADFGLARAFGVP--VRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDS  204 (283)
T ss_pred             HHHEEEcCCCcEEEeecccccccCCC--ccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            67999999999999999998764211  1112233567889999655444456788999999999999999999986432


Q ss_pred             cCchhHHHHHHHhhh---h------hhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLS---V------SVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~---~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ... ...........   .      ...+....................+..+.+++.+||+.+|.+|||++++++
T Consensus       205 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~  279 (283)
T cd07835         205 EID-QLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ  279 (283)
T ss_pred             HHH-HHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            211 11111110000   0      000000000000001111112334566889999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.84  E-value=3e-21  Score=134.34  Aligned_cols=123  Identities=23%  Similarity=0.283  Sum_probs=85.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||++.....  .........|+..|+|||. .....++.++|+||+||++|++++|..||....
T Consensus       124 p~Nil~~~~~~~kl~Dfg~~~~~~~--~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~  200 (316)
T cd05619         124 LDNILLDTDGHIKIADFGMCKENML--GDAKTCTFCGTPDYIAPEI-LLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHD  200 (316)
T ss_pred             HHHEEECCCCCEEEccCCcceECCC--CCCceeeecCCccccCHHH-HcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999875311  1112234568899999954 445568899999999999999999999996432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHH-HHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAK-EIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~-~vl~  147 (164)
                      ...  ..            ..+....       ...+..++..+.+++.+||+.||++||++. ++++
T Consensus       201 ~~~--~~------------~~i~~~~-------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05619         201 EEE--LF------------QSIRMDN-------PCYPRWLTREAKDILVKLFVREPERRLGVKGDIRQ  247 (316)
T ss_pred             HHH--HH------------HHHHhCC-------CCCCccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence            110  00            0011000       001123445688999999999999999996 5543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.84  E-value=6.4e-21  Score=131.28  Aligned_cols=127  Identities=20%  Similarity=0.283  Sum_probs=86.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhh----ccCcccCccchHhHHHHHHHHHhcCCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYG----REGRVSTNGDVYSFGIMLMEAFTRKKPT   76 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~----~~~~~~~~~Di~s~g~~~~~~~~g~~p~   76 (164)
                      |+||+++.++.++|+|||.+.....  .........++..|++||.+.    ....++.++|+||+|+++|++++|..||
T Consensus       138 p~Nili~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~  215 (292)
T cd06644         138 AGNVLLTLDGDIKLADFGVSAKNVK--TLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPH  215 (292)
T ss_pred             cceEEEcCCCCEEEccCccceeccc--cccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCC
Confidence            6899999999999999998865421  111223345788999996553    2334677899999999999999999998


Q ss_pred             CccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           77 DEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ........ .            .....     ........+..++..+.+++.+||+.+|++||+++++++
T Consensus       216 ~~~~~~~~-~------------~~~~~-----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  268 (292)
T cd06644         216 HELNPMRV-L------------LKIAK-----SEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE  268 (292)
T ss_pred             ccccHHHH-H------------HHHhc-----CCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            64321110 0            00000     001111112334556889999999999999999999976

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.84  E-value=6e-21  Score=136.75  Aligned_cols=137  Identities=22%  Similarity=0.377  Sum_probs=104.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh--cCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT--RKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~--g~~p~~~   78 (164)
                      +.|||++.++++||+|||++|.+.....+......+.+..|+|+|.++ -++|++++|+|+||+.+||+++  ...||..
T Consensus       665 ~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsil-lgkFttaSDvWafgvTlwE~~~~C~e~Py~~  743 (807)
T KOG1094|consen  665 TRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESIL-LGKFTTASDVWAFGVTLWEVFMLCREQPYSQ  743 (807)
T ss_pred             ccceeecCcccEEecCcccccccccCCceeeecceeeeeeehhHHHHH-hccccchhhhhhhHHHHHHHHHHHhhCchhh
Confidence            479999999999999999999887767776777778889999995554 5669999999999999999886  5678765


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSK  151 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~  151 (164)
                      +.....          -.+...+++..   ........|..|+..++++|..||+.+.++|||++++...|.+
T Consensus       744 lt~e~v----------ven~~~~~~~~---~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~  803 (807)
T KOG1094|consen  744 LTDEQV----------VENAGEFFRDQ---GRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQE  803 (807)
T ss_pred             hhHHHH----------HHhhhhhcCCC---CcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHH
Confidence            433221          11222222211   2223344567788899999999999999999999999887765

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.84  E-value=2e-21  Score=135.92  Aligned_cols=120  Identities=18%  Similarity=0.224  Sum_probs=84.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||+++.....     .....|++.|+|||.+ ....++.++|+||+||++|+|++|..||....
T Consensus       146 p~NIll~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~elltg~~pf~~~~  219 (329)
T PTZ00263        146 PENLLLDNKGHVKVTDFGFAKKVPDR-----TFTLCGTPEYLAPEVI-QSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDT  219 (329)
T ss_pred             HHHEEECCCCCEEEeeccCceEcCCC-----cceecCChhhcCHHHH-cCCCCCCcceeechHHHHHHHHcCCCCCCCCC
Confidence            68999999999999999998865211     1234688999999544 45567889999999999999999999996421


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCC-----HHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRIN-----AKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~vl~  147 (164)
                      ...  ..           ..+....        ...+..++..+.+++.+||+.||.+|++     +++++.
T Consensus       220 ~~~--~~-----------~~i~~~~--------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~  270 (329)
T PTZ00263        220 PFR--IY-----------EKILAGR--------LKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN  270 (329)
T ss_pred             HHH--HH-----------HHHhcCC--------cCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence            100  00           0011000        0111223455889999999999999997     566664

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.84  E-value=9e-21  Score=133.06  Aligned_cols=144  Identities=22%  Similarity=0.244  Sum_probs=92.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||+++......  .......++..|++||.+.....++.++|+||+|+++|++++|..||....
T Consensus       136 p~Nil~~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~  213 (337)
T cd07858         136 PSNLLLNANCDLKICDFGLARTTSEKG--DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKD  213 (337)
T ss_pred             HHHEEEcCCCCEEECcCccccccCCCc--ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCC
Confidence            679999999999999999987652211  112234578889999766655568889999999999999999999986431


Q ss_pred             cCchhHHHHHHHhhhh------------hhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHH
Q 039452           81 SGEMTLKRWINDLLSV------------SVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTE  148 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  148 (164)
                      .  ......+......            .....+...............+.++..+.+++.+||+.+|++|||++++++.
T Consensus       214 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h  291 (337)
T cd07858         214 Y--VHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH  291 (337)
T ss_pred             h--HHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence            1  1111111111100            0011111100001111111223456778999999999999999999999875

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.84  E-value=5.4e-21  Score=131.98  Aligned_cols=126  Identities=21%  Similarity=0.263  Sum_probs=87.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||++.......  .......++..|++||. .....++.++|+||+|+++|++++|..||....
T Consensus       143 p~Nili~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~-~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~  219 (296)
T cd06655         143 SDNVLLGMDGSVKLTDFGFCAQITPEQ--SKRSTMVGTPYWMAPEV-VTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNEN  219 (296)
T ss_pred             HHHEEECCCCCEEEccCccchhccccc--ccCCCcCCCccccCcch-hcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            689999999999999999887642111  11223457788999954 445567889999999999999999999986432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ......             . +..    ........+..++..+.+++.+||..||.+|||+.+++.
T Consensus       220 ~~~~~~-------------~-~~~----~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~  268 (296)
T cd06655         220 PLRALY-------------L-IAT----NGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ  268 (296)
T ss_pred             HHHHHH-------------H-HHh----cCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence            111000             0 000    001111122334556889999999999999999999885

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.84  E-value=7e-21  Score=129.02  Aligned_cols=129  Identities=23%  Similarity=0.415  Sum_probs=89.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.++|+|||.+....... ........++..|++|| .......+.++|+||+|++++++++ |..||...
T Consensus       130 p~ni~i~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~~y~~pe-~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~  207 (260)
T cd05067         130 AANILVSETLCCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPE-AINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGM  207 (260)
T ss_pred             HHhEEEcCCCCEEEccCcceeecCCCC-cccccCCcccccccCHH-HhccCCcCcccchHHHHHHHHHHHhCCCCCCCCC
Confidence            689999999999999999987653111 11112233567899995 5455567889999999999999998 99998643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSK  151 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~  151 (164)
                      ..  .....            .+....      ....+...+..+.+++.+||..+|++|||+++++..|+.
T Consensus       208 ~~--~~~~~------------~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         208 TN--PEVIQ------------NLERGY------RMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             Ch--HHHHH------------HHHcCC------CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence            21  11110            010000      001122334568999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.84  E-value=4.3e-21  Score=139.19  Aligned_cols=126  Identities=20%  Similarity=0.313  Sum_probs=95.5

Q ss_pred             cceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhh----ccCcccCccchHhHHHHHHHHHhcCCCCC
Q 039452            2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYG----REGRVSTNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         2 ~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~----~~~~~~~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      .|||++-+|.++|+|||.+...  ..........+||++|||||++.    ...+|+.++||||||+.+.+|..+.+|-.
T Consensus       159 GNiL~TldGdirLADFGVSAKn--~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHh  236 (1187)
T KOG0579|consen  159 GNILLTLDGDIRLADFGVSAKN--KSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHH  236 (1187)
T ss_pred             cceEEEecCcEeeecccccccc--hhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCcc
Confidence            5999999999999999998753  12222334678999999997664    35568899999999999999999999865


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ...+....+                  .+.+..++....|..++..+.+++.+||..||..||+++++++
T Consensus       237 elnpMRVll------------------KiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~  288 (1187)
T KOG0579|consen  237 ELNPMRVLL------------------KIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK  288 (1187)
T ss_pred             ccchHHHHH------------------HHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence            433222111                  1123344445556677888999999999999999999999885

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.84  E-value=5.9e-21  Score=129.17  Aligned_cols=127  Identities=19%  Similarity=0.388  Sum_probs=86.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||.++...... ........++..|++||.. ....++.++|+||+|+++|++++ |..||...
T Consensus       128 p~nili~~~~~~kl~d~g~~~~~~~~~-~~~~~~~~~~~~y~~pe~~-~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~  205 (256)
T cd05113         128 ARNCLVDDQGCVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVL-LYSKFSSKSDVWAFGVLMWEVYSLGKMPYERF  205 (256)
T ss_pred             cceEEEcCCCCEEECCCccceecCCCc-eeecCCCccChhhCCHHHH-hcCcccchhHHHHHHHHHHHHhcCCCCCcCcC
Confidence            689999999999999999987652211 1111122345679999544 44557889999999999999998 88888643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTEL  149 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l  149 (164)
                      ....  ...           .+.+ .   ...   ..+...+..+.+++.+||+.+|++|||+.+++..|
T Consensus       206 ~~~~--~~~-----------~~~~-~---~~~---~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~  255 (256)
T cd05113         206 NNSE--TVE-----------KVSQ-G---LRL---YRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSI  255 (256)
T ss_pred             CHHH--HHH-----------HHhc-C---CCC---CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhh
Confidence            2111  000           0110 0   000   01112345689999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.84  E-value=9.4e-21  Score=129.06  Aligned_cols=127  Identities=23%  Similarity=0.298  Sum_probs=86.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhc----cCcccCccchHhHHHHHHHHHhcCCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGR----EGRVSTNGDVYSFGIMLMEAFTRKKPT   76 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~----~~~~~~~~Di~s~g~~~~~~~~g~~p~   76 (164)
                      |+||+++.++.++|+|||.+.....  .........++..|+|||.+..    ...++.++|+||+|++++++++|..||
T Consensus       141 p~ni~~~~~~~~~l~d~~~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~  218 (275)
T cd06608         141 GQNILLTKNAEVKLVDFGVSAQLDS--TLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPL  218 (275)
T ss_pred             HHHEEEccCCeEEECCCccceeccc--chhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCc
Confidence            6899999999999999999876422  1112233457889999965532    233667899999999999999999999


Q ss_pred             CccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           77 DEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ........ ..            .+...     .......+...+..+.+++.+||..||.+|||+.++++
T Consensus       219 ~~~~~~~~-~~------------~~~~~-----~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         219 CDMHPMRA-LF------------KIPRN-----PPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE  271 (275)
T ss_pred             cccchHHH-HH------------Hhhcc-----CCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            64321110 00            00000     01111122334566889999999999999999999876

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.83  E-value=7.5e-21  Score=128.95  Aligned_cols=127  Identities=22%  Similarity=0.248  Sum_probs=87.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccc-cccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMT-QTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+||+++.++.++|+|||.++.......... .....++..|+|||.. .....+.++|+||+|+++|++++|+.||...
T Consensus       132 p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~el~~g~~p~~~~  210 (263)
T cd06625         132 GANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVI-SGEGYGRKADVWSVGCTVVEMLTEKPPWAEF  210 (263)
T ss_pred             HHHEEEcCCCCEEEeecccceeccccccccccccCCCcCccccCccee-ccCCCCchhhhHHHHHHHHHHHhCCCCcccc
Confidence            6799999999999999999876522111111 1234567889999554 4555888999999999999999999998642


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .....             ......      .......+..++..+.+++.+||..+|.+|||+.++++
T Consensus       211 ~~~~~-------------~~~~~~------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  259 (263)
T cd06625         211 EAMAA-------------IFKIAT------QPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLR  259 (263)
T ss_pred             chHHH-------------HHHHhc------cCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhh
Confidence            11100             000000      00111122344566889999999999999999999986

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.83  E-value=3.5e-21  Score=134.47  Aligned_cols=118  Identities=22%  Similarity=0.291  Sum_probs=82.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||++.....  .........|+..|+|||.+ ....++.++|+||+||++|+|++|..||....
T Consensus       129 p~Nill~~~~~~kL~Dfg~~~~~~~--~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslGvil~elltG~~pf~~~~  205 (324)
T cd05587         129 LDNVMLDAEGHIKIADFGMCKENIF--GGKTTRTFCGTPDYIAPEII-AYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED  205 (324)
T ss_pred             HHHeEEcCCCCEEEeecCcceecCC--CCCceeeecCCccccChhhh-cCCCCCcccchhhhHHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999865311  11122345689999999554 45567889999999999999999999996432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINA  142 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  142 (164)
                      ...  ..           ..+....        ...+..++..+.+++.+||..||.+|++.
T Consensus       206 ~~~--~~-----------~~i~~~~--------~~~~~~~~~~~~~li~~~l~~~P~~R~~~  246 (324)
T cd05587         206 EDE--LF-----------QSIMEHN--------VSYPKSLSKEAVSICKGLLTKHPAKRLGC  246 (324)
T ss_pred             HHH--HH-----------HHHHcCC--------CCCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence            111  00           0011000        01122345568899999999999999976

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.83  E-value=1.5e-20  Score=128.87  Aligned_cols=143  Identities=21%  Similarity=0.281  Sum_probs=90.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.+........  ......++..|++||.+.....++.++|+||+|+++|++++|..||....
T Consensus       128 p~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~  205 (286)
T cd07847         128 PENILITKQGQIKLCDFGFARILTGPGD--DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKS  205 (286)
T ss_pred             hhhEEEcCCCcEEECccccceecCCCcc--cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999987532221  12234567889999766554567889999999999999999999997533


Q ss_pred             cCchhHHHHHHHhhhh---hhHHHhhhh------cccccc---hhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSV---SVMEVVDAN------LLTRED---RHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~---~~~~~~~~~------~~~~~~---~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ..+. .. .+......   .........      ......   .........+..+.+++.+||+.+|++|||+.+++.
T Consensus       206 ~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  282 (286)
T cd07847         206 DVDQ-LY-LIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE  282 (286)
T ss_pred             hHHH-HH-HHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence            2211 11 01100000   000000000      000000   000111234667899999999999999999998875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.83  E-value=1.1e-20  Score=131.13  Aligned_cols=143  Identities=21%  Similarity=0.164  Sum_probs=89.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.+..+....  .......++..|++||.+.....++.++|+||+|+++|++++|..||....
T Consensus       136 p~nil~~~~~~~kL~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~  213 (309)
T cd07845         136 VSNLLLTDKGCLKIADFGLARTYGLPA--KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKS  213 (309)
T ss_pred             HHHEEECCCCCEEECccceeeecCCcc--CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            679999999999999999988753211  122233457789999666555567889999999999999999999997432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHh---h------hhccccc--chhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVV---D------ANLLTRE--DRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~---~------~~~~~~~--~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .. ..+.. +............   .      .......  ..........++.+.+++.+||+.||++|||+++++.
T Consensus       214 ~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~  289 (309)
T cd07845         214 EI-EQLDL-IIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE  289 (309)
T ss_pred             HH-HHHHH-HHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            11 11111 1111100000000   0      0000000  0000011224566889999999999999999999886

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.83  E-value=4.2e-21  Score=134.49  Aligned_cols=129  Identities=19%  Similarity=0.207  Sum_probs=88.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||++.....     ......|++.|+|||.+ ....++.++|+||+||++|+|++|..||....
T Consensus       129 p~Nil~~~~~~~kL~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwslG~il~ell~g~~pf~~~~  202 (333)
T cd05600         129 PENFLIDASGHIKLTDFGLSKGIVT-----YANSVVGSPDYMAPEVL-RGKGYDFTVDYWSLGCMLYEFLCGFPPFSGST  202 (333)
T ss_pred             HHHEEECCCCCEEEEeCcCCccccc-----ccCCcccCccccChhHh-cCCCCCCccceecchHHHhhhhhCCCCCCCCC
Confidence            6899999999999999999876421     22345688999999554 45578899999999999999999999996432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTE  148 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  148 (164)
                      ....  ..           .+..................++..+.+++.+||..+|.+|||++++++.
T Consensus       203 ~~~~--~~-----------~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h  257 (333)
T cd05600         203 PNET--WE-----------NLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH  257 (333)
T ss_pred             HHHH--HH-----------HHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence            1110  00           0000000000000000012345668899999999999999999999864

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.83  E-value=1e-20  Score=127.48  Aligned_cols=128  Identities=27%  Similarity=0.407  Sum_probs=87.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.++|+|||+++...... ........++..|++|| +.....++.++|+||+|+++|++++ |..||...
T Consensus       121 p~nili~~~~~~~l~d~g~~~~~~~~~-~~~~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~  198 (250)
T cd05085         121 ARNCLVGENNVLKISDFGMSRQEDDGI-YSSSGLKQIPIKWTAPE-ALNYGRYSSESDVWSYGILLWETFSLGVCPYPGM  198 (250)
T ss_pred             hheEEEcCCCeEEECCCccceeccccc-cccCCCCCCcccccCHH-HhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCC
Confidence            689999999999999999987542111 11111223456799995 4455667889999999999999998 88898643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELS  150 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~  150 (164)
                      ....  ...            .+....      ....+..++..+.+++.+||..+|++|||+.++++.|.
T Consensus       199 ~~~~--~~~------------~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         199 TNQQ--ARE------------QVEKGY------RMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             CHHH--HHH------------HHHcCC------CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence            2111  000            000000      00112234566899999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.83  E-value=6.6e-21  Score=130.35  Aligned_cols=127  Identities=26%  Similarity=0.300  Sum_probs=86.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||++......   .......++..|++||.+ ....++.++|+||+||++|++++|..||....
T Consensus       123 p~Nili~~~~~~~l~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~-~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~  198 (277)
T cd05607         123 PENVLLDDQGNCRLSDLGLAVELKDG---KTITQRAGTNGYMAPEIL-KEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHK  198 (277)
T ss_pred             hHhEEEcCCCCEEEeeceeeeecCCC---ceeeccCCCCCccCHHHH-ccCCCCCchhHHHHHHHHHHHHhCCCCCCCCc
Confidence            68999999999999999998765221   122334678899999554 45558899999999999999999999986432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .... ......        ......    ...   ....++..+.+++.+||+.||.+||++.++++
T Consensus       199 ~~~~-~~~~~~--------~~~~~~----~~~---~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~  249 (277)
T cd05607         199 EKVA-KEELKR--------RTLEDE----VKF---EHQNFTEESKDICRLFLAKKPEDRLGSREKND  249 (277)
T ss_pred             chhh-HHHHHH--------Hhhccc----ccc---ccccCCHHHHHHHHHHhccCHhhCCCCccchh
Confidence            1111 000000        001000    000   01234556899999999999999999976653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.83  E-value=1.3e-21  Score=136.96  Aligned_cols=128  Identities=21%  Similarity=0.310  Sum_probs=87.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhc-----cCcccCccchHhHHHHHHHHHhcCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGR-----EGRVSTNGDVYSFGIMLMEAFTRKKP   75 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-----~~~~~~~~Di~s~g~~~~~~~~g~~p   75 (164)
                      |+|||++.++.+||+|||++..+.... ........+++.|+|||.+..     ...++.++|+||+||++|+|++|..|
T Consensus       130 p~NIll~~~~~~kL~Dfg~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~P  208 (330)
T cd05601         130 PENVLIDRTGHIKLADFGSAARLTANK-MVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSP  208 (330)
T ss_pred             hHheEECCCCCEEeccCCCCeECCCCC-ceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCC
Confidence            689999999999999999998753221 112233468899999966542     34567889999999999999999999


Q ss_pred             CCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           76 TDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      |........             ...+....    .....+....++..+.+++.+||+ +|++|||+.+++.
T Consensus       209 f~~~~~~~~-------------~~~i~~~~----~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~  262 (330)
T cd05601         209 FHEGTSAKT-------------YNNIMNFQ----RFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC  262 (330)
T ss_pred             CCCCCHHHH-------------HHHHHcCC----CccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence            964321110             01111100    000111112345668899999998 9999999999875

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.83  E-value=9.3e-21  Score=128.82  Aligned_cols=129  Identities=19%  Similarity=0.317  Sum_probs=86.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhh--ccCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYG--REGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~--~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+||+++.++.++|+|||.+..+.  ..........++..|+|||...  ....++.++|+||+||++|++++|..||..
T Consensus       134 p~nili~~~~~~~l~dfg~~~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~  211 (267)
T cd06645         134 GANILLTDNGHVKLADFGVSAQIT--ATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFD  211 (267)
T ss_pred             HHHEEECCCCCEEECcceeeeEcc--CcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCccc
Confidence            679999999999999999987652  1112223456888999996543  233467899999999999999999999864


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .........             ......   ..........++..+.+++.+||..+|++|||++++++
T Consensus       212 ~~~~~~~~~-------------~~~~~~---~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~  264 (267)
T cd06645         212 LHPMRALFL-------------MTKSNF---QPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ  264 (267)
T ss_pred             ccchhhHHh-------------hhccCC---CCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence            321111000             000000   00000011123455889999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.83  E-value=1.3e-21  Score=139.52  Aligned_cols=133  Identities=23%  Similarity=0.357  Sum_probs=97.1

Q ss_pred             cceEecCCceEEEeccccceeccCCCCccccc-cccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQT-QTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         2 ~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~-~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      .|||++.++.+||+|||+++.-   ..+.... ...-+..|+|||.+ ....++.++|||||||++||+++ |..||.+.
T Consensus       291 RNcL~~~~~~vKISDFGLs~~~---~~~~~~~~~~klPirWLAPEtl-~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~  366 (474)
T KOG0194|consen  291 RNCLYSKKGVVKISDFGLSRAG---SQYVMKKFLKKLPIRWLAPETL-NTGIFSFKTDVWSFGVLLWEIFENGAEPYPGM  366 (474)
T ss_pred             HHheecCCCeEEeCccccccCC---cceeeccccccCcceecChhhh-ccCccccccchhheeeeEEeeeccCCCCCCCC
Confidence            5999999999999999998763   1222222 23467899999554 45589999999999999999997 78898754


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhh
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLF  157 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~  157 (164)
                      .....  ..           .+      .....+...+...+..+..++.+||..+|++||||.++.+.++.+.....
T Consensus       367 ~~~~v--~~-----------kI------~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~  425 (474)
T KOG0194|consen  367 KNYEV--KA-----------KI------VKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE  425 (474)
T ss_pred             CHHHH--HH-----------HH------HhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence            32211  00           00      01122223334556678899999999999999999999999999987755

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.83  E-value=5.3e-21  Score=133.90  Aligned_cols=128  Identities=21%  Similarity=0.299  Sum_probs=90.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCC---CccccccccccccccCchhhhccC---cccCccchHhHHHHHHHHHhcCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGED---QSMTQTQTLATIGYMAPVEYGREG---RVSTNGDVYSFGIMLMEAFTRKK   74 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~~~~~~~pe~~~~~~---~~~~~~Di~s~g~~~~~~~~g~~   74 (164)
                      |+|+||+.+|++||+|||.+..+..+.   .........||+.|+|||.+..+.   .-+.+.||||+|+++|.++.|+.
T Consensus       238 PsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~  317 (576)
T KOG0585|consen  238 PSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQL  317 (576)
T ss_pred             hhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccC
Confidence            789999999999999999987652111   111223478999999997766533   24578999999999999999999


Q ss_pred             CCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           75 PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        75 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ||.+..                 ..+..++...  .....+..+.+...+.++++++|..||.+|.++.+|..
T Consensus       318 PF~~~~-----------------~~~l~~KIvn--~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~  371 (576)
T KOG0585|consen  318 PFFDDF-----------------ELELFDKIVN--DPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKL  371 (576)
T ss_pred             Ccccch-----------------HHHHHHHHhc--CcccCCCcccccHHHHHHHHHHhhcChhheeehhhhee
Confidence            996421                 1122222211  11112222345666889999999999999999988764

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.83  E-value=8.9e-21  Score=129.42  Aligned_cols=125  Identities=20%  Similarity=0.321  Sum_probs=87.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.++.+....  .......++..|++||.. ....++.++|+||+|+++|++++|..||....
T Consensus       126 p~ni~i~~~~~~~l~d~g~~~~~~~~~--~~~~~~~~~~~y~~PE~~-~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~  202 (274)
T cd06609         126 AANILLSEEGDVKLADFGVSGQLTSTM--SKRNTFVGTPFWMAPEVI-KQSGYDEKADIWSLGITAIELAKGEPPLSDLH  202 (274)
T ss_pred             HHHEEECCCCCEEEcccccceeecccc--cccccccCCccccChhhh-ccCCCCchhhHHHHHHHHHHHHhCCCCcccCc
Confidence            679999999999999999998763221  222344677889999554 45558899999999999999999999986432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ...  ..   .         .+....    ..... ...++..+.+++.+||..+|++|||+++++.
T Consensus       203 ~~~--~~---~---------~~~~~~----~~~~~-~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~  250 (274)
T cd06609         203 PMR--VL---F---------LIPKNN----PPSLE-GNKFSKPFKDFVSLCLNKDPKERPSAKELLK  250 (274)
T ss_pred             hHH--HH---H---------HhhhcC----CCCCc-ccccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence            111  00   0         000000    00000 0114556889999999999999999999976

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.83  E-value=5.3e-21  Score=131.01  Aligned_cols=126  Identities=19%  Similarity=0.256  Sum_probs=86.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhc----cCcccCccchHhHHHHHHHHHhcCCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGR----EGRVSTNGDVYSFGIMLMEAFTRKKPT   76 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~----~~~~~~~~Di~s~g~~~~~~~~g~~p~   76 (164)
                      |+||+++.++.++|+|||.+......  ........++..|+|||.+..    ...++.++|+||+|+++|++++|..||
T Consensus       149 ~~nili~~~~~~~l~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~  226 (282)
T cd06636         149 GQNVLLTENAEVKLVDFGVSAQLDRT--VGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPL  226 (282)
T ss_pred             HHHEEECCCCCEEEeeCcchhhhhcc--ccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCc
Confidence            57999999999999999998754211  112233567889999976542    234677899999999999999999998


Q ss_pred             CccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           77 DEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .........             ..... .     .........++..+.+++.+||+.||.+|||+.++++
T Consensus       227 ~~~~~~~~~-------------~~~~~-~-----~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~  278 (282)
T cd06636         227 CDMHPMRAL-------------FLIPR-N-----PPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK  278 (282)
T ss_pred             cccCHHhhh-------------hhHhh-C-----CCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence            643211100             00000 0     0000111234556899999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.83  E-value=4.1e-20  Score=126.50  Aligned_cols=143  Identities=21%  Similarity=0.170  Sum_probs=91.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.+.......  .......++..|.+||........+.++|+||+|++++++++|+.||....
T Consensus       126 p~nili~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~  203 (283)
T cd05118         126 PENLLINTEGVLKLADFGLARSFGSPV--RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKS  203 (283)
T ss_pred             HHHEEECCCCcEEEeeeeeeEecCCCc--ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence            679999999999999999987753221  122334577889999666544467889999999999999999999986432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhc-------c----cccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANL-------L----TREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~----~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ...  ....+................       .    ............++..+.+++.+||+.||.+||++++++.
T Consensus       204 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~  279 (283)
T cd05118         204 EID--QLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA  279 (283)
T ss_pred             HHH--HHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence            111  111111110000000000000       0    0000111122346778999999999999999999999875

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.83  E-value=1.5e-20  Score=127.99  Aligned_cols=134  Identities=21%  Similarity=0.304  Sum_probs=84.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhcc------CcccCccchHhHHHHHHHHHh-cC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGRE------GRVSTNGDVYSFGIMLMEAFT-RK   73 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~------~~~~~~~Di~s~g~~~~~~~~-g~   73 (164)
                      |+||+++.++.++|+|||.+................++..|++||.+...      ..++.++|+||+|+++|++++ |.
T Consensus       128 p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~  207 (269)
T cd05087         128 LRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGS  207 (269)
T ss_pred             cceEEEcCCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCC
Confidence            68999999999999999998654222211222234567789999655321      125678999999999999996 99


Q ss_pred             CCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHH
Q 039452           74 KPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELS  150 (164)
Q Consensus        74 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~  150 (164)
                      .||........  ...           ...........  .......+..+.+++..|| .+|++|||+++|+..|.
T Consensus       208 ~p~~~~~~~~~--~~~-----------~~~~~~~~~~~--~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         208 QPYRHLSDEQV--LTY-----------TVREQQLKLPK--PRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             CCCCCCChHHH--HHH-----------HhhcccCCCCC--CccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence            99864322111  000           00000000000  0001123445788999999 68999999999998763

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.83  E-value=1.2e-20  Score=139.70  Aligned_cols=132  Identities=19%  Similarity=0.217  Sum_probs=95.6

Q ss_pred             cceEecCCceEEEeccccceeccCCCCcc----ccc---cccccccccCchhhhc--cCcccCccchHhHHHHHHHHHhc
Q 039452            2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSM----TQT---QTLATIGYMAPVEYGR--EGRVSTNGDVYSFGIMLMEAFTR   72 (164)
Q Consensus         2 ~Nill~~~~~~kl~dfg~~~~~~~~~~~~----~~~---~~~~~~~~~~pe~~~~--~~~~~~~~Di~s~g~~~~~~~~g   72 (164)
                      +||||+.+|..||||||.+.--...-...    ...   ...-|+.|++||.+-.  +...+.++|||++||+||.++..
T Consensus       175 ENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~  254 (738)
T KOG1989|consen  175 ENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYF  254 (738)
T ss_pred             hheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHh
Confidence            79999999999999999875421111000    001   1235789999977643  44578999999999999999999


Q ss_pred             CCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHH
Q 039452           73 KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI  152 (164)
Q Consensus        73 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~  152 (164)
                      ..||+.-....                 +      ....+..+..+.....+.+|+..||+.||++||++-+|+..+-.+
T Consensus       255 t~PFe~sg~la-----------------I------lng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l  311 (738)
T KOG1989|consen  255 TTPFEESGKLA-----------------I------LNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFEL  311 (738)
T ss_pred             CCCcCcCccee-----------------E------EeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHH
Confidence            99997431111                 1      112233333456677799999999999999999999999998888


Q ss_pred             HHHh
Q 039452          153 RDSL  156 (164)
Q Consensus       153 ~~~~  156 (164)
                      .+.-
T Consensus       312 ~~~~  315 (738)
T KOG1989|consen  312 ANKP  315 (738)
T ss_pred             hcCC
Confidence            7643

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.83  E-value=3.4e-21  Score=134.77  Aligned_cols=129  Identities=19%  Similarity=0.287  Sum_probs=86.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||+++......  .......|+..|+|||.+ ....++.++|+||+||++|++++|..||....
T Consensus       124 p~Nili~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~  200 (329)
T cd05588         124 LDNVLLDAEGHIKLTDYGMCKEGIRPG--DTTSTFCGTPNYIAPEIL-RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVG  200 (329)
T ss_pred             HHHeEECCCCCEEECcCccccccccCC--CccccccCCccccCHHHH-cCCCCCCccceechHHHHHHHHHCCCCccccc
Confidence            689999999999999999986532111  122345689999999544 45667889999999999999999999996432


Q ss_pred             cCch---hHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCC------HHHHHH
Q 039452           81 SGEM---TLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRIN------AKEIVT  147 (164)
Q Consensus        81 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps------~~~vl~  147 (164)
                      ....   ....+.        ...+...       ....+..++..+.+++.+||+.||.+|+|      ++++++
T Consensus       201 ~~~~~~~~~~~~~--------~~~~~~~-------~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~  261 (329)
T cd05588         201 MSDNPDQNTEDYL--------FQVILEK-------QIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS  261 (329)
T ss_pred             ccccccccchHHH--------HHHHHcC-------CCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence            2110   000000        0101000       01122334566889999999999999997      556653

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.83  E-value=1.2e-20  Score=129.13  Aligned_cols=145  Identities=21%  Similarity=0.404  Sum_probs=92.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc-cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS-MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+||+++.++.++|+|||.+......... .......++..|++||.. ....++.++|+||+|++++++++|..|+...
T Consensus       137 p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~-~~~~~~~~~Di~slG~~l~el~tg~~p~~~~  215 (284)
T cd05038         137 ARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECL-RTSKFSSASDVWSFGVTLYELFTYGDPSQSP  215 (284)
T ss_pred             HHhEEEcCCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHH-ccCCCCcccchHHHhhhhheeeccCCCcccc
Confidence            68999999999999999999876322111 111122345678999544 4556788999999999999999999987643


Q ss_pred             ccCchhHHHHHH-HhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWIN-DLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI  152 (164)
Q Consensus        80 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~  152 (164)
                      ............ ........+.+....      ....+..++..+.+++.+||+.+|++|||+.++++.|..+
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         216 PAEFLRMIGIAQGQMIVTRLLELLKEGE------RLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             cchhccccccccccccHHHHHHHHHcCC------cCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence            221110000000 000001111111111      1111234456689999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.83  E-value=3.4e-20  Score=131.10  Aligned_cols=143  Identities=18%  Similarity=0.171  Sum_probs=84.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCC-Ccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPT-DEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~-~~~   79 (164)
                      |+|||++.++.++|+|||.++....   ........|+..|++||.+ ....++.++|+||+||++|+++++..++ ...
T Consensus       185 p~Nill~~~~~~kl~DfG~a~~~~~---~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~  260 (357)
T PHA03209        185 TENIFINDVDQVCIGDLGAAQFPVV---APAFLGLAGTVETNAPEVL-ARDKYNSKADIWSAGIVLFEMLAYPSTIFEDP  260 (357)
T ss_pred             HHHEEECCCCCEEEecCcccccccc---CcccccccccccccCCeec-CCCCCCchhhHHHHHHHHHHHHHcCCccccCC
Confidence            6899999999999999999875311   1112234588999999544 4556889999999999999999865544 322


Q ss_pred             ccCchh--------HHHHHHHhhh--h-----h----hHHHhhhhccccc---chhhhhHHHHHHHHHHHHhhccccCcc
Q 039452           80 FSGEMT--------LKRWINDLLS--V-----S----VMEVVDANLLTRE---DRHFAAKQQCVSFVFNLAMECTIESPE  137 (164)
Q Consensus        80 ~~~~~~--------~~~~~~~~~~--~-----~----~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~cl~~~p~  137 (164)
                      ......        +...+.....  .     .    ...+++.......   .........++..+.+++.+||+.||.
T Consensus       261 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~  340 (357)
T PHA03209        261 PSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAA  340 (357)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcc
Confidence            111110        1110100000  0     0    0000000000000   000001113345677899999999999


Q ss_pred             CCCCHHHHHH
Q 039452          138 RRINAKEIVT  147 (164)
Q Consensus       138 ~Rps~~~vl~  147 (164)
                      +|||+.++++
T Consensus       341 ~Rpta~e~l~  350 (357)
T PHA03209        341 MRPSAEEILN  350 (357)
T ss_pred             cCcCHHHHhc
Confidence            9999999986

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.83  E-value=1.9e-21  Score=135.79  Aligned_cols=121  Identities=23%  Similarity=0.262  Sum_probs=84.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||+++.....  ........|++.|+|||. .....++.++|+||+||++|+|++|..||....
T Consensus       124 p~Nili~~~~~~kl~DfG~a~~~~~~--~~~~~~~~gt~~y~aPE~-~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  200 (325)
T cd05602         124 PENILLDSQGHIVLTDFGLCKENIEH--NGTTSTFCGTPEYLAPEV-LHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN  200 (325)
T ss_pred             HHHeEECCCCCEEEccCCCCcccccC--CCCcccccCCccccCHHH-HcCCCCCCccccccccHHHHHHhcCCCCCCCCC
Confidence            68999999999999999998754211  112234568999999954 455668889999999999999999999996422


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEI  145 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v  145 (164)
                      ....     .        ..+....        ...+..++..+.+++.+||+.||.+|+++.+.
T Consensus       201 ~~~~-----~--------~~i~~~~--------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~  244 (325)
T cd05602         201 TAEM-----Y--------DNILNKP--------LQLKPNITNSARHLLEGLLQKDRTKRLGAKDD  244 (325)
T ss_pred             HHHH-----H--------HHHHhCC--------cCCCCCCCHHHHHHHHHHcccCHHHCCCCCCC
Confidence            1110     0        0111110        01112345568899999999999999998743

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.83  E-value=2.8e-20  Score=131.32  Aligned_cols=141  Identities=20%  Similarity=0.179  Sum_probs=88.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||.++....   ........++..|++||.+ ....++.++|+||+||++|+|++|..||....
T Consensus       146 p~Nil~~~~~~~kL~Dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~-~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~  221 (353)
T cd07850         146 PSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVI-LGMGYKENVDIWSVGCIMGEMIRGTVLFPGTD  221 (353)
T ss_pred             HHHEEECCCCCEEEccCccceeCCC---CCCCCCCcccccccCHHHH-hCCCCCCchhhHhHHHHHHHHHHCCCCCCCCC
Confidence            6899999999999999999986521   1112234578889999554 45668899999999999999999999986432


Q ss_pred             cCchhHHHHHHHhhhhhhHHH-----------hhhhcccc-cc---------h---hhhhHHHHHHHHHHHHhhccccCc
Q 039452           81 SGEMTLKRWINDLLSVSVMEV-----------VDANLLTR-ED---------R---HFAAKQQCVSFVFNLAMECTIESP  136 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~-~~---------~---~~~~~~~~~~~~~~l~~~cl~~~p  136 (164)
                      . ......... .......++           ........ ..         .   ........+..+.+++.+||+.||
T Consensus       222 ~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  299 (353)
T cd07850         222 H-IDQWNKIIE-QLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDP  299 (353)
T ss_pred             H-HHHHHHHHH-hcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCCh
Confidence            1 111111110 000110010           00000000 00         0   000011235568899999999999


Q ss_pred             cCCCCHHHHHH
Q 039452          137 ERRINAKEIVT  147 (164)
Q Consensus       137 ~~Rps~~~vl~  147 (164)
                      .+|||+.+++.
T Consensus       300 ~~R~t~~eiL~  310 (353)
T cd07850         300 EKRISVDDALQ  310 (353)
T ss_pred             hhCcCHHHHhc
Confidence            99999999986

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.83  E-value=5.7e-21  Score=137.36  Aligned_cols=121  Identities=24%  Similarity=0.378  Sum_probs=91.5

Q ss_pred             cceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhh--ccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYG--REGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         2 ~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~--~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      .|||++.+|.|||+|||.+..+.      .....+||++|||||+++  ..+.++-++||||+|+.+.++...++|+..+
T Consensus       155 GNILLse~g~VKLaDFGSAsi~~------PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnM  228 (948)
T KOG0577|consen  155 GNILLSEPGLVKLADFGSASIMA------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM  228 (948)
T ss_pred             cceEecCCCeeeeccccchhhcC------chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCc
Confidence            59999999999999999998752      234578999999997764  4667899999999999999999999997643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ....             .+.++.+.      ..+......++..+++++..||+.-|.+|||.++++.
T Consensus       229 NAMS-------------ALYHIAQN------esPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~  277 (948)
T KOG0577|consen  229 NAMS-------------ALYHIAQN------ESPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLK  277 (948)
T ss_pred             hHHH-------------HHHHHHhc------CCCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence            2111             11122211      1111123456777999999999999999999998875

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.83  E-value=2.1e-20  Score=126.72  Aligned_cols=129  Identities=26%  Similarity=0.476  Sum_probs=89.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.++|+|||.+...... .........++..|++||.+ ....++.++|+||+|++++++++ |..||...
T Consensus       130 p~ni~i~~~~~~~l~d~~~~~~~~~~-~~~~~~~~~~~~~y~~PE~~-~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~  207 (260)
T cd05073         130 AANILVSASLVCKIADFGLARVIEDN-EYTAREGAKFPIKWTAPEAI-NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM  207 (260)
T ss_pred             cceEEEcCCCcEEECCCcceeeccCC-CcccccCCcccccccCHhHh-ccCCcCccccchHHHHHHHHHHhcCCCCCCCC
Confidence            68999999999999999998765221 11112223456779999544 45567889999999999999998 88898643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSK  151 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~  151 (164)
                      ....  ....            +....      ....+...+..+.+++.+||+.+|++||++.++++.|+.
T Consensus       208 ~~~~--~~~~------------~~~~~------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         208 SNPE--VIRA------------LERGY------RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             CHHH--HHHH------------HhCCC------CCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            2111  1110            00000      001112344568899999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.83  E-value=1.8e-20  Score=128.11  Aligned_cols=126  Identities=21%  Similarity=0.353  Sum_probs=87.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.+..+....  .......++..|++||....+..++.++|+||+|+++|++++|..||....
T Consensus       129 p~ni~i~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~  206 (277)
T cd06917         129 AANILVTNTGNVKLCDFGVAALLNQNS--SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVD  206 (277)
T ss_pred             HHHEEEcCCCCEEEccCCceeecCCCc--cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCC
Confidence            689999999999999999987753222  222334678889999766555557889999999999999999999986432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ....  .            ......    ..... .....+..+.+++.+||+.||++||++.+++.
T Consensus       207 ~~~~--~------------~~~~~~----~~~~~-~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~  254 (277)
T cd06917         207 AFRA--M------------MLIPKS----KPPRL-EDNGYSKLLREFVAACLDEEPKERLSAEELLK  254 (277)
T ss_pred             hhhh--h------------hccccC----CCCCC-CcccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence            1110  0            000000    00000 00113456889999999999999999999976

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.83  E-value=1.3e-20  Score=127.37  Aligned_cols=126  Identities=29%  Similarity=0.491  Sum_probs=88.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.++|+|||.++......     .....+..|++||.+ ....++.++|+||+|++++++++ |..||...
T Consensus       130 p~Nili~~~~~~~l~d~g~~~~~~~~~-----~~~~~~~~~~ape~~-~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~  203 (256)
T cd05039         130 ARNVLVSEDLVAKVSDFGLAKEASQGQ-----DSGKLPVKWTAPEAL-REKKFSTKSDVWSFGILLWEIYSFGRVPYPRI  203 (256)
T ss_pred             cceEEEeCCCCEEEccccccccccccc-----ccCCCcccccCchhh-cCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence            689999999999999999987652111     122345679999544 45567789999999999999997 88888632


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI  152 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~  152 (164)
                      ....  .            ...+....      ....+..++..+.+++.+||..+|++|||++++++.|.++
T Consensus       204 ~~~~--~------------~~~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~  256 (256)
T cd05039         204 PLKD--V------------VPHVEKGY------RMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI  256 (256)
T ss_pred             CHHH--H------------HHHHhcCC------CCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence            1110  0            01111110      0111223456688999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.83  E-value=9.3e-21  Score=134.49  Aligned_cols=130  Identities=20%  Similarity=0.270  Sum_probs=88.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhcc---CcccCccchHhHHHHHHHHHhcCCCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGRE---GRVSTNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~---~~~~~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      |+|||++.++.+||+|||++..+.... ........|++.|+|||.+...   ..++.++|+||+||++|+|++|..||.
T Consensus       170 p~NILl~~~~~~kL~DfG~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~  248 (370)
T cd05596         170 PDNMLLDKSGHLKLADFGTCMKMDANG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY  248 (370)
T ss_pred             HHHEEEcCCCCEEEEeccceeeccCCC-cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcC
Confidence            689999999999999999987652211 1122345689999999665432   237789999999999999999999997


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccC--CCCHHHHHHH
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPER--RINAKEIVTE  148 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rps~~~vl~~  148 (164)
                      ......             ....+....    .....+....++..+.+++.+||+.+|.+  |+|++++++.
T Consensus       249 ~~~~~~-------------~~~~i~~~~----~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h  304 (370)
T cd05596         249 ADSLVG-------------TYSKIMDHK----NSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH  304 (370)
T ss_pred             CCCHHH-------------HHHHHHcCC----CcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence            432110             011111110    00011111234566889999999999987  9999999753

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.83  E-value=4.4e-21  Score=134.73  Aligned_cols=120  Identities=18%  Similarity=0.214  Sum_probs=85.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||++..+..     ......|++.|+|||.+ ....++.++|+||+||++|+|++|..||....
T Consensus       159 p~NILl~~~~~ikL~DFG~a~~~~~-----~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~  232 (340)
T PTZ00426        159 PENLLLDKDGFIKMTDFGFAKVVDT-----RTYTLCGTPEYIAPEIL-LNVGHGKAADWWTLGIFIYEILVGCPPFYANE  232 (340)
T ss_pred             HHHEEECCCCCEEEecCCCCeecCC-----CcceecCChhhcCHHHH-hCCCCCccccccchhhHHHHHhcCCCCCCCCC
Confidence            6899999999999999999976521     12235688999999554 45557889999999999999999999996431


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCC-----CHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRI-----NAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~vl~  147 (164)
                      ...  .           ...+.....        ..+...+..+.+++++||+.||.+|+     |++++++
T Consensus       233 ~~~--~-----------~~~i~~~~~--------~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~  283 (340)
T PTZ00426        233 PLL--I-----------YQKILEGII--------YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE  283 (340)
T ss_pred             HHH--H-----------HHHHhcCCC--------CCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence            110  0           001111100        01223345588999999999999995     7888875

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.83  E-value=1.4e-20  Score=128.07  Aligned_cols=133  Identities=20%  Similarity=0.285  Sum_probs=84.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhc------cCcccCccchHhHHHHHHHHHh-cC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGR------EGRVSTNGDVYSFGIMLMEAFT-RK   73 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~------~~~~~~~~Di~s~g~~~~~~~~-g~   73 (164)
                      |+||+++.++.+||+|||.++...............++..|++||.+..      ....+.++|+||+||++|++++ |.
T Consensus       128 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~  207 (269)
T cd05042         128 LRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAAD  207 (269)
T ss_pred             HhheEecCCCcEEEeccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCC
Confidence            6899999999999999999865322111111222345667999966532      2346778999999999999998 77


Q ss_pred             CCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHH
Q 039452           74 KPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTEL  149 (164)
Q Consensus        74 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l  149 (164)
                      .||....... ..            ...+......  ......+..++..+.+++..|| .||++|||+++|++.|
T Consensus       208 ~p~~~~~~~~-~~------------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l  267 (269)
T cd05042         208 QPYPDLSDEQ-VL------------KQVVREQDIK--LPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL  267 (269)
T ss_pred             CCCCcCCHHH-HH------------HHHhhccCcc--CCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence            7875432111 00            0111111000  0011112334555778899998 5999999999999876

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.83  E-value=3.7e-20  Score=127.53  Aligned_cols=144  Identities=21%  Similarity=0.168  Sum_probs=89.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.++.+....  .......++..|++||.+.....++.++|+||+|++++++++|..||....
T Consensus       134 p~nili~~~~~~~l~d~g~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~  211 (293)
T cd07843         134 TSNLLLNNRGILKICDFGLAREYGSPL--KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKS  211 (293)
T ss_pred             HHHEEECCCCcEEEeecCceeeccCCc--cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            689999999999999999988753221  122334567889999666544456789999999999999999999987532


Q ss_pred             cCchhHHHHHHHhh---hhhhHHHhhhhccc-----ccc--h-hhhhHHH-HHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLL---SVSVMEVVDANLLT-----RED--R-HFAAKQQ-CVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-----~~~--~-~~~~~~~-~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .... .........   .........-....     ...  . ....+.. ++..+.+++.+||+.+|++|||+++++.
T Consensus       212 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~  289 (293)
T cd07843         212 EIDQ-LNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK  289 (293)
T ss_pred             hHHH-HHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence            2111 111110000   00000000000000     000  0 0001111 3566889999999999999999999985

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.83  E-value=1.7e-20  Score=128.77  Aligned_cols=128  Identities=17%  Similarity=0.276  Sum_probs=86.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhc----cCcccCccchHhHHHHHHHHHhcCCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGR----EGRVSTNGDVYSFGIMLMEAFTRKKPT   76 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~----~~~~~~~~Di~s~g~~~~~~~~g~~p~   76 (164)
                      |+||+++.++.++|+|||+++.+...  ........++..|++||.+..    ...++.++|+||+|+++|++++|..||
T Consensus       152 p~nili~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~  229 (286)
T cd06638         152 GNNILLTTEGGVKLVDFGVSAQLTST--RLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPL  229 (286)
T ss_pred             HHhEEECCCCCEEEccCCceeecccC--CCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCC
Confidence            67999999999999999998765221  112233468889999965532    234678899999999999999999998


Q ss_pred             CccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHH
Q 039452           77 DEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTE  148 (164)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  148 (164)
                      ........    .         .... .    ........+..++..+.+++.+||+.||++|||+.++++.
T Consensus       230 ~~~~~~~~----~---------~~~~-~----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  283 (286)
T cd06638         230 ADLHPMRA----L---------FKIP-R----NPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH  283 (286)
T ss_pred             CCCchhHH----H---------hhcc-c----cCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence            64321110    0         0000 0    0000011122234558899999999999999999999874

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.83  E-value=1.3e-20  Score=129.46  Aligned_cols=126  Identities=23%  Similarity=0.334  Sum_probs=86.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||++..+....   ......++..|++||.+ ....++.++|+||+|+++|++++|..||....
T Consensus       130 p~Nil~~~~~~~~l~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~-~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~  205 (285)
T cd05605         130 PENILLDDYGHIRISDLGLAVEIPEGE---TIRGRVGTVGYMAPEVV-KNERYTFSPDWWGLGCLIYEMIEGKSPFRQRK  205 (285)
T ss_pred             HHHEEECCCCCEEEeeCCCceecCCCC---ccccccCCCCccCcHHh-cCCCCCccccchhHHHHHHHHHHCCCCCCCCc
Confidence            679999999999999999987652211   11234678899999554 45567889999999999999999999997422


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCC-----CHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRI-----NAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~vl~  147 (164)
                      ... ....         ....+...       ....+...+..+.+++.+||..||++||     ++++++.
T Consensus       206 ~~~-~~~~---------~~~~~~~~-------~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05605         206 EKV-KREE---------VERRVKED-------QEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA  260 (285)
T ss_pred             hhh-HHHH---------HHHHhhhc-------ccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence            111 0000         00001100       0111223455688999999999999999     7888865

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.83  E-value=4.9e-21  Score=134.94  Aligned_cols=129  Identities=23%  Similarity=0.344  Sum_probs=87.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCC---------------------------CccccccccccccccCchhhhccCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGED---------------------------QSMTQTQTLATIGYMAPVEYGREGRV   53 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~pe~~~~~~~~   53 (164)
                      |+||+++.++.+||+|||++..+....                           .........|++.|+|||.+ ....+
T Consensus       129 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~  207 (350)
T cd05573         129 PDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVL-RGTPY  207 (350)
T ss_pred             HHHeEECCCCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHH-cCCCC
Confidence            689999999999999999987653222                           00122345689999999544 45578


Q ss_pred             cCccchHhHHHHHHHHHhcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccc
Q 039452           54 STNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTI  133 (164)
Q Consensus        54 ~~~~Di~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  133 (164)
                      +.++||||+||++|+|++|..||........             ...+....    .....+....+++.+.+++.+||.
T Consensus       208 ~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~-------------~~~i~~~~----~~~~~p~~~~~~~~~~~li~~ll~  270 (350)
T cd05573         208 GLECDWWSLGVILYEMLYGFPPFYSDTLQET-------------YNKIINWK----ESLRFPPDPPVSPEAIDLICRLLC  270 (350)
T ss_pred             CCceeeEecchhhhhhccCCCCCCCCCHHHH-------------HHHHhccC----CcccCCCCCCCCHHHHHHHHHHcc
Confidence            8999999999999999999999974321110             00111100    000010111145668899999997


Q ss_pred             cCccCCCC-HHHHHHH
Q 039452          134 ESPERRIN-AKEIVTE  148 (164)
Q Consensus       134 ~~p~~Rps-~~~vl~~  148 (164)
                       ||.+||+ ++++++.
T Consensus       271 -dp~~R~~s~~~ll~h  285 (350)
T cd05573         271 -DPEDRLGSFEEIKSH  285 (350)
T ss_pred             -ChhhcCCCHHHHhcC
Confidence             9999999 9999873

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.83  E-value=1.9e-20  Score=127.95  Aligned_cols=124  Identities=23%  Similarity=0.318  Sum_probs=87.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++++|||++..+...  ........++..|++||. .....++.++|+||+|++++++++|..|+....
T Consensus       129 p~ni~i~~~~~~~l~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~  205 (277)
T cd06642         129 AANVLLSEQGDVKLADFGVAGQLTDT--QIKRNTFVGTPFWMAPEV-IKQSAYDFKADIWSLGITAIELAKGEPPNSDLH  205 (277)
T ss_pred             hheEEEeCCCCEEEccccccccccCc--chhhhcccCcccccCHHH-hCcCCCchhhhHHHHHHHHHHHHhCCCCCcccc
Confidence            68999999999999999998765321  111223457788999954 445567889999999999999999999986432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .....              ..+....      .......++..+.+++.+||+.+|++|||+.+++.
T Consensus       206 ~~~~~--------------~~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  252 (277)
T cd06642         206 PMRVL--------------FLIPKNS------PPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLK  252 (277)
T ss_pred             hhhHH--------------hhhhcCC------CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            11110              0000000      00111234556889999999999999999999997

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.83  E-value=1.2e-20  Score=130.26  Aligned_cols=126  Identities=21%  Similarity=0.272  Sum_probs=87.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.+.......  .......+++.|++||.+ ....++.++|+||+|+++|++++|..||....
T Consensus       143 p~Nili~~~~~~~l~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~  219 (297)
T cd06656         143 SDNILLGMDGSVKLTDFGFCAQITPEQ--SKRSTMVGTPYWMAPEVV-TRKAYGPKVDIWSLGIMAIEMVEGEPPYLNEN  219 (297)
T ss_pred             HHHEEECCCCCEEECcCccceEccCCc--cCcCcccCCccccCHHHH-cCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            689999999999999999987642111  112234578889999544 45667889999999999999999999996422


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ......             .     ...........+...+..+.+++.+||+.+|++||+++++++
T Consensus       220 ~~~~~~-------------~-----~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  268 (297)
T cd06656         220 PLRALY-------------L-----IATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ  268 (297)
T ss_pred             cchhee-------------e-----eccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            111000             0     000011111122334556889999999999999999999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.83  E-value=2e-20  Score=126.47  Aligned_cols=124  Identities=20%  Similarity=0.280  Sum_probs=86.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.+..+...  ........++..|+|||. .....++.++|+||+|++++++++|..||....
T Consensus       130 p~nil~~~~~~~~l~df~~~~~~~~~--~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~  206 (257)
T cd08223         130 TQNVFLTRTNIIKVGDLGIARVLENQ--CDMASTLIGTPYYMSPEL-FSNKPYNYKSDVWALGCCVYEMATLKHAFNAKD  206 (257)
T ss_pred             chhEEEecCCcEEEecccceEEeccc--CCccccccCCcCccChhH-hcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC
Confidence            68999999999999999998776321  112233457889999954 445567788999999999999999999986321


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ...     ...        ...... ..      ..+...+..+.+++.+||+.+|.+|||+.++++
T Consensus       207 ~~~-----~~~--------~~~~~~-~~------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  253 (257)
T cd08223         207 MNS-----LVY--------RIIEGK-LP------PMPKDYSPELGELIATMLSKRPEKRPSVKSILR  253 (257)
T ss_pred             HHH-----HHH--------HHHhcC-CC------CCccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            100     000        000000 00      011234456889999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.83  E-value=2.8e-20  Score=128.90  Aligned_cols=144  Identities=21%  Similarity=0.234  Sum_probs=88.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc--cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS--MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+||+++.++.+||+|||.+..+......  .......++..|+|||.......++.++|+||+|+++|++++|..||..
T Consensus       147 p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~  226 (310)
T cd07865         147 AANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQG  226 (310)
T ss_pred             HHHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCC
Confidence            67999999999999999998765322211  1112345678899997665444567889999999999999999999864


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHh---------hhhcccccchhhhhH-----HHHHHHHHHHHhhccccCccCCCCHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVV---------DANLLTREDRHFAAK-----QQCVSFVFNLAMECTIESPERRINAKE  144 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~cl~~~p~~Rps~~~  144 (164)
                      ..  .......+.........+..         +........ ....+     ......+.+++.+||+.||++|||+++
T Consensus       227 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e  303 (310)
T cd07865         227 NT--EQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQ-KRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADT  303 (310)
T ss_pred             CC--HHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCcc-chhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHH
Confidence            22  11111111111111000000         000000000 00000     012345779999999999999999999


Q ss_pred             HHH
Q 039452          145 IVT  147 (164)
Q Consensus       145 vl~  147 (164)
                      +++
T Consensus       304 ~l~  306 (310)
T cd07865         304 ALN  306 (310)
T ss_pred             Hhc
Confidence            875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.83  E-value=1.8e-20  Score=127.20  Aligned_cols=132  Identities=20%  Similarity=0.280  Sum_probs=89.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCcc--ccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSM--TQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+||+++.++.++|+|||.+..+.......  ......++..|++||.+.....++.++|+||+|++++++++|..||..
T Consensus       130 p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~  209 (267)
T cd06610         130 AGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSK  209 (267)
T ss_pred             HHhEEEcCCCCEEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccc
Confidence            679999999999999999987664322221  122345788999996665444688899999999999999999999864


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ...... ..            .......  ...........++..+.+++.+||..||++|||++++++
T Consensus       210 ~~~~~~-~~------------~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~  263 (267)
T cd06610         210 YPPMKV-LM------------LTLQNDP--PSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK  263 (267)
T ss_pred             cChhhh-HH------------HHhcCCC--CCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            322110 10            0010000  000000011244566889999999999999999999876

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.83  E-value=4.5e-20  Score=128.24  Aligned_cols=147  Identities=19%  Similarity=0.162  Sum_probs=89.8

Q ss_pred             CcceEecC----CceEEEeccccceeccCCCC-ccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCC
Q 039452            1 PSNVLLDD----NMVAHLSDFGIAKLLIGEDQ-SMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKP   75 (164)
Q Consensus         1 p~Nill~~----~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p   75 (164)
                      |+||+++.    ++.+||+|||++..+..... ........++..|+|||.+.....++.++|+||+|++++++++|..|
T Consensus       136 p~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~  215 (316)
T cd07842         136 PANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPI  215 (316)
T ss_pred             HHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCC
Confidence            67999998    99999999999886532221 11122345678899997666555678899999999999999999999


Q ss_pred             CCccccCch--------hHHHHHHHhhhh------------hhHHHhhhhcccccc---hhhhhHH--HHHHHHHHHHhh
Q 039452           76 TDEMFSGEM--------TLKRWINDLLSV------------SVMEVVDANLLTRED---RHFAAKQ--QCVSFVFNLAME  130 (164)
Q Consensus        76 ~~~~~~~~~--------~~~~~~~~~~~~------------~~~~~~~~~~~~~~~---~~~~~~~--~~~~~~~~l~~~  130 (164)
                      |........        ........+...            ......+........   .......  .....+.+++.+
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  295 (316)
T cd07842         216 FKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRK  295 (316)
T ss_pred             CcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHH
Confidence            975432210        011110000000            000000000000000   0000011  334568899999


Q ss_pred             ccccCccCCCCHHHHHH
Q 039452          131 CTIESPERRINAKEIVT  147 (164)
Q Consensus       131 cl~~~p~~Rps~~~vl~  147 (164)
                      ||+.||++|||+.+++.
T Consensus       296 ~l~~~P~~Rps~~eil~  312 (316)
T cd07842         296 LLEYDPTKRITAEEALE  312 (316)
T ss_pred             HhcCCcccCcCHHHHhc
Confidence            99999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.82  E-value=3.4e-20  Score=127.16  Aligned_cols=142  Identities=23%  Similarity=0.403  Sum_probs=89.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccc-cccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMT-QTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+||+++.++.++|+|||+++.+........ .....++..|++||.. ....++.++|+||+|++++++++|..++...
T Consensus       136 p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~~l~el~~~~~~~~~~  214 (284)
T cd05081         136 TRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESL-TESKFSVASDVWSFGVVLYELFTYSDKSCSP  214 (284)
T ss_pred             HhhEEECCCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHh-ccCCcChHHHHHHHHHHHHHHhhcCCcCCCc
Confidence            6899999999999999999987532221111 1112234568999544 4556788999999999999999987665322


Q ss_pred             ccCchhHHHHHHHhh-----hhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLL-----SVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI  152 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~  152 (164)
                      ...   ....+....     ...+.+.+...      .....+..++..+.+++.+||..+|++|||+.++++.|+.+
T Consensus       215 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         215 PAE---FMRMMGNDKQGQMIVYHLIELLKNN------GRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             chh---hhhhcccccccccchHHHHHHHhcC------CcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence            110   000000000     00011111111      01111234456689999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.82  E-value=2.5e-21  Score=135.15  Aligned_cols=119  Identities=24%  Similarity=0.276  Sum_probs=83.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||++.....  .........|++.|+|||.+ ....++.++|+||+||++|+|++|..||....
T Consensus       124 p~NIll~~~~~~kl~Dfg~~~~~~~--~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwslG~il~ell~g~~pf~~~~  200 (323)
T cd05575         124 PENILLDSQGHVVLTDFGLCKEGIE--HSKTTSTFCGTPEYLAPEVL-RKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRD  200 (323)
T ss_pred             HHHeEECCCCcEEEeccCCCccccc--CCCccccccCChhhcChhhh-cCCCCCccccccccchhhhhhhcCCCCCCCCC
Confidence            6899999999999999999865321  11122344689999999554 45668889999999999999999999996421


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAK  143 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~  143 (164)
                      ...     ..        ..+....        ...+...+..+.+++.+||+.||.+||++.
T Consensus       201 ~~~-----~~--------~~i~~~~--------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (323)
T cd05575         201 TAE-----MY--------DNILNKP--------LRLKPNISVSARHLLEGLLQKDRTKRLGAK  242 (323)
T ss_pred             HHH-----HH--------HHHHcCC--------CCCCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence            110     00        0111110        011123355688999999999999999985

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.82  E-value=1.3e-20  Score=128.95  Aligned_cols=131  Identities=22%  Similarity=0.341  Sum_probs=87.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||++..+...    ......++..|++|| ......++.++|+||+|+++|++++|..||....
T Consensus       123 p~Nill~~~~~~~l~dfg~~~~~~~~----~~~~~~~~~~y~aPE-~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~  197 (279)
T cd06619         123 PSNMLVNTRGQVKLCDFGVSTQLVNS----IAKTYVGTNAYMAPE-RISGEQYGIHSDVWSLGISFMELALGRFPYPQIQ  197 (279)
T ss_pred             HHHEEECCCCCEEEeeCCcceecccc----cccCCCCChhhcCce-eecCCCCCCcchHHHHHHHHHHHHhCCCCchhhc
Confidence            67999999999999999998765221    123346788999995 4445568889999999999999999999986432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTE  148 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  148 (164)
                      ........      ...........     .. .......+..+.+++.+||+.+|++||+++++++.
T Consensus       198 ~~~~~~~~------~~~~~~~~~~~-----~~-~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~  253 (279)
T cd06619         198 KNQGSLMP------LQLLQCIVDED-----PP-VLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDH  253 (279)
T ss_pred             ccccccch------HHHHHHHhccC-----CC-CCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence            21110000      00000000000     00 00011234458899999999999999999998763

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.82  E-value=2.2e-20  Score=131.30  Aligned_cols=140  Identities=18%  Similarity=0.135  Sum_probs=88.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||+++....     ......++..|++||.+.....++.++|+||+|+++|++++|+.||....
T Consensus       145 p~NIll~~~~~~kL~dfg~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~  219 (342)
T cd07879         145 PGNLAVNEDCELKILDFGLARHADA-----EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD  219 (342)
T ss_pred             HHHEEECCCCCEEEeeCCCCcCCCC-----CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            6799999999999999999875311     11234567889999666554557889999999999999999999997421


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcc------------cccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLL------------TREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .. ......+. ........+.+....            .............+..+.+++.+||+.||++||++++++.
T Consensus       220 ~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~  296 (342)
T cd07879         220 YL-DQLTQILK-VTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALE  296 (342)
T ss_pred             HH-HHHHHHHH-hcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            11 11111111 000001111110000            0000000011234556889999999999999999999985

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.82  E-value=2.2e-20  Score=127.18  Aligned_cols=131  Identities=24%  Similarity=0.469  Sum_probs=87.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCcccccccc---ccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL---ATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPT   76 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~---~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~   76 (164)
                      |+||+++.++.++++|||.+................   .+..|++||. .....++.++|+||+|+++|++++ |..||
T Consensus       134 p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~-~~~~~~~~~~DvwslG~~l~e~l~~g~~p~  212 (269)
T cd05065         134 ARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEA-IAYRKFTSASDVWSYGIVMWEVMSYGERPY  212 (269)
T ss_pred             hheEEEcCCCcEEECCCccccccccCccccccccccCCCcceeecCHhH-hccCcccchhhhhhhHHHHHHHhcCCCCCC
Confidence            689999999999999999987653221111111111   2357999954 455667889999999999999886 88888


Q ss_pred             CccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHH
Q 039452           77 DEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI  152 (164)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~  152 (164)
                      ......  ....            .+...      .....+..++..+.+++.+||+.+|++||++.+++..|+.+
T Consensus       213 ~~~~~~--~~~~------------~i~~~------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         213 WDMSNQ--DVIN------------AIEQD------YRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             CCCCHH--HHHH------------HHHcC------CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            642211  1110            01000      01111233455688999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.82  E-value=2.5e-20  Score=128.26  Aligned_cols=137  Identities=26%  Similarity=0.357  Sum_probs=105.4

Q ss_pred             cceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCccc
Q 039452            2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEMF   80 (164)
Q Consensus         2 ~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~~   80 (164)
                      .|++|++.-.+||+|-.++|-+-....+........+..||++ +.+....++.++|+||||+++||+++ |+.|+....
T Consensus       425 RNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMsl-Eal~n~~yssasDvWsfGVllWELmtlg~~PyaeID  503 (563)
T KOG1024|consen  425 RNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSL-EALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEID  503 (563)
T ss_pred             hcceehhheeEEeccchhccccCcccccccCCCCCCcccccCH-HHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccC
Confidence            5999999999999999888865333322222334457789999 55556669999999999999999997 888987543


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhhcc
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRN  159 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~~~  159 (164)
                      +.++.              ..      ....++...|..||+++..+|.=||...|++||++++++..|.++..++...
T Consensus       504 PfEm~--------------~y------lkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~qlt~Y  562 (563)
T KOG1024|consen  504 PFEME--------------HY------LKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQLTRY  562 (563)
T ss_pred             HHHHH--------------HH------HhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHhhc
Confidence            33321              11      1234556677889999999999999999999999999999999998887643

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.82  E-value=2.3e-20  Score=128.03  Aligned_cols=145  Identities=17%  Similarity=0.324  Sum_probs=90.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc-cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS-MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+||+++.++.++|+|||+++.+...... .......++..|++||.. ....++.++|+||+|+++|+++++..|....
T Consensus       137 p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~-~~~~~~~~~Di~slG~il~ellt~~~~~~~~  215 (284)
T cd05079         137 ARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECL-IQSKFYIASDVWSFGVTLYELLTYCDSESSP  215 (284)
T ss_pred             hheEEEcCCCCEEECCCccccccccCccceeecCCCCCCccccCHHHh-ccCCCCccccchhhhhhhhhhhcCCCCCccc
Confidence            68999999999999999998765322211 111233456779999654 4455778999999999999999977654321


Q ss_pred             ccCchhHHH-HHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHH
Q 039452           80 FSGEMTLKR-WINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI  152 (164)
Q Consensus        80 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~  152 (164)
                      ......... .............+...      .....+..++..+.+++.+||+.+|.+|||++++++.++.+
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         216 MTLFLKMIGPTHGQMTVTRLVRVLEEG------KRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             cchhhhhcccccccccHHHHHHHHHcC------ccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence            110000000 00000000000111110      01111233556799999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.82  E-value=2e-20  Score=127.17  Aligned_cols=126  Identities=20%  Similarity=0.285  Sum_probs=86.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc----cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS----MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPT   76 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~----~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~   76 (164)
                      |+||+++.++.++|+|||.++........    .......++..|++||.+ ....++.++|+||+|+++|++++|..||
T Consensus       134 p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~-~~~~~~~~~Dv~slG~il~~l~~g~~p~  212 (267)
T cd06628         134 GANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVV-KQTSYTRKADIWSLGCLVVEMLTGKHPF  212 (267)
T ss_pred             HHHEEEcCCCCEEecccCCCcccccccccCCccccccccCCCcCccChhHh-ccCCCCchhhhHHHHHHHHHHhhCCCCC
Confidence            68999999999999999998765311111    111223477889999544 4555778899999999999999999999


Q ss_pred             CccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           77 DEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .......    ..         .....       ......+..++..+.+++.+||+.||.+||++.++++
T Consensus       213 ~~~~~~~----~~---------~~~~~-------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  263 (267)
T cd06628         213 PDCTQLQ----AI---------FKIGE-------NASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK  263 (267)
T ss_pred             CCccHHH----HH---------HHHhc-------cCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence            6431110    00         00000       0001112334566889999999999999999999876

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.82  E-value=2e-20  Score=127.35  Aligned_cols=127  Identities=21%  Similarity=0.317  Sum_probs=88.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.+.......   ......++..|++||.. ....++.++|+||+|+++|++++|..||....
T Consensus       142 ~~nil~~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~~~Pe~~-~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~  217 (269)
T cd08528         142 PNNIMLGEDDKVTITDFGLAKQKQPES---KLTSVVGTILYSCPEIV-KNEPYGEKADVWAFGCILYQMCTLQPPFYSTN  217 (269)
T ss_pred             HHHEEECCCCcEEEecccceeeccccc---ccccccCcccCcChhhh-cCCCCchHHHHHHHHHHHHHHHhCCCcccccC
Confidence            579999999999999999987652211   22345578889999544 45668889999999999999999999985321


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELS  150 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~  150 (164)
                      .  ....            ..+......     .......+..+.+++.+||+.||++||++.++...+.
T Consensus       218 ~--~~~~------------~~~~~~~~~-----~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         218 M--LSLA------------TKIVEAVYE-----PLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             H--HHHH------------HHHhhccCC-----cCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence            1  0000            000000000     0001123456889999999999999999999988764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.82  E-value=2.3e-20  Score=128.46  Aligned_cols=127  Identities=20%  Similarity=0.287  Sum_probs=85.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccC----cccCccchHhHHHHHHHHHhcCCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREG----RVSTNGDVYSFGIMLMEAFTRKKPT   76 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~----~~~~~~Di~s~g~~~~~~~~g~~p~   76 (164)
                      |+||+++.++.++|+|||.++.+....  .......++..|++||.+....    .++.++|+||+|+++|++++|..||
T Consensus       156 p~nili~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~  233 (291)
T cd06639         156 GNNILLTTEGGVKLVDFGVSAQLTSTR--LRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPL  233 (291)
T ss_pred             HHHEEEcCCCCEEEeecccchhccccc--ccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCC
Confidence            679999999999999999987652111  1122345788899996553322    2578999999999999999999998


Q ss_pred             CccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           77 DEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ........ .            ......     .......+......+.+++.+||+.+|++||++.++++
T Consensus       234 ~~~~~~~~-~------------~~~~~~-----~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~  286 (291)
T cd06639         234 FDMHPVKT-L------------FKIPRN-----PPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE  286 (291)
T ss_pred             CCCcHHHH-H------------HHHhcC-----CCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            64321110 0            000000     00011112233455889999999999999999999876

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.82  E-value=4.2e-20  Score=127.29  Aligned_cols=143  Identities=21%  Similarity=0.222  Sum_probs=88.4

Q ss_pred             CcceEecC-CceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDD-NMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+||+++. ++.++|+|||.++.+..  .........+++.|+|||.+.....++.++|+||+|+++|+|++|..||...
T Consensus       138 ~~nil~~~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~  215 (295)
T cd07837         138 PQNLLVDKQKGLLKIADLGLGRAFSI--PVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGD  215 (295)
T ss_pred             hHHEEEecCCCeEEEeecccceecCC--CccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Confidence            68999998 89999999999876421  1112223356788999976655555788999999999999999999998643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHh-------hhhcccc--cchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVV-------DANLLTR--EDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~--~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ..... ...... ..........       .......  ........+.++..+.+++.+||..||.+|||+++++.
T Consensus       216 ~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~  290 (295)
T cd07837         216 SELQQ-LLHIFK-LLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT  290 (295)
T ss_pred             CHHHH-HHHHHH-HhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence            21111 000000 0000000000       0000000  00001111235667899999999999999999999875

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.82  E-value=1.8e-20  Score=126.98  Aligned_cols=129  Identities=28%  Similarity=0.497  Sum_probs=87.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.++++|||.+..+.. ...........+..|++||.. .....+.++|+||+|++++++++ |..||...
T Consensus       131 p~nili~~~~~~~l~d~g~~~~~~~-~~~~~~~~~~~~~~y~~PE~~-~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~  208 (261)
T cd05034         131 ARNILVGENLVCKIADFGLARLIED-DEYTAREGAKFPIKWTAPEAA-NYGRFTIKSDVWSFGILLTEIVTYGRVPYPGM  208 (261)
T ss_pred             hheEEEcCCCCEEECccccceeccc-hhhhhhhccCCCccccCHHHh-ccCCcCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999876522 111111122345679999544 45567889999999999999998 89998642


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSK  151 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~  151 (164)
                      .... ...            .... ..      ....+...+..+.+++.+||+.+|++||+++++.+.|+.
T Consensus       209 ~~~~-~~~------------~~~~-~~------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         209 TNRE-VLE------------QVER-GY------RMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             CHHH-HHH------------HHHc-CC------CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence            1110 000            0000 00      011112234568899999999999999999999988864

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.82  E-value=2e-20  Score=128.43  Aligned_cols=126  Identities=20%  Similarity=0.258  Sum_probs=86.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++++|||.+......  ........++..|++||.. ....++.++|+||+|+++|++++|..||....
T Consensus       143 p~Nil~~~~~~~~l~d~g~~~~~~~~--~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~  219 (285)
T cd06648         143 SDSILLTSDGRVKLSDFGFCAQVSKE--VPRRKSLVGTPYWMAPEVI-SRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEP  219 (285)
T ss_pred             hhhEEEcCCCcEEEcccccchhhccC--CcccccccCCccccCHHHh-cCCCCCCcccHHHHHHHHHHHHhCCCCCcCCC
Confidence            68999999999999999987654211  1112234578899999554 45557889999999999999999999986421


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ...  .   ..         .+...    .......+..++..+.+++.+||+.+|++|||+.++++
T Consensus       220 ~~~--~---~~---------~~~~~----~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~  268 (285)
T cd06648         220 PLQ--A---MK---------RIRDN----LPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLN  268 (285)
T ss_pred             HHH--H---HH---------HHHhc----CCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence            100  0   00         00000    00111111224556899999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.82  E-value=2e-20  Score=129.25  Aligned_cols=127  Identities=18%  Similarity=0.253  Sum_probs=87.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||++..+...  ........++..|++||.+ ....++.++|+||+|++++++++|..||....
T Consensus       145 p~Nill~~~~~~kL~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~  221 (297)
T cd06659         145 SDSILLTLDGRVKLSDFGFCAQISKD--VPKRKSLVGTPYWMAPEVI-SRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDS  221 (297)
T ss_pred             HHHeEEccCCcEEEeechhHhhcccc--cccccceecCccccCHHHH-ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            67999999999999999998654211  1112335678899999544 45567889999999999999999999986321


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTE  148 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  148 (164)
                      ...  ..            ..+...    ...........+..+.+++.+||+.+|.+||+++++++.
T Consensus       222 ~~~--~~------------~~~~~~----~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~  271 (297)
T cd06659         222 PVQ--AM------------KRLRDS----PPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDH  271 (297)
T ss_pred             HHH--HH------------HHHhcc----CCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence            110  00            000000    000011112334558899999999999999999999883

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.82  E-value=6.6e-20  Score=126.53  Aligned_cols=143  Identities=19%  Similarity=0.180  Sum_probs=89.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.++......  .......++..|++||.+.....++.++|+||+||+++++++|..+|....
T Consensus       130 p~nill~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~  207 (298)
T cd07841         130 PNNLLIASDGVLKLADFGLARSFGSPN--RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDS  207 (298)
T ss_pred             hhhEEEcCCCCEEEccceeeeeccCCC--ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCc
Confidence            689999999999999999987652211  122334567789999766555567889999999999999999977775432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHh----hhhcc-----cccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVV----DANLL-----TREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ... .+..... ..........    .....     .............+..+.+++.+||+.+|++|||+++++.
T Consensus       208 ~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~  281 (298)
T cd07841         208 DID-QLGKIFE-ALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE  281 (298)
T ss_pred             cHH-HHHHHHH-HcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence            211 1111110 0000000000    00000     0000011112234567889999999999999999999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.82  E-value=3.7e-20  Score=127.43  Aligned_cols=144  Identities=19%  Similarity=0.199  Sum_probs=86.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.++.......  ......++..|++||.+.....++.++|+||+|+++|++++|..||....
T Consensus       131 p~Nil~~~~~~~~l~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~  208 (291)
T cd07870         131 PQNLLISYLGELKLADFGLARAKSIPSQ--TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVS  208 (291)
T ss_pred             hHHEEEcCCCcEEEeccccccccCCCCC--CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCch
Confidence            6899999999999999999875421111  12233467889999655444457788999999999999999999997533


Q ss_pred             cCchhHHHHHHHhhhhhhHHHh----------hhhcccccchhhhh---HHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVV----------DANLLTREDRHFAA---KQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~---~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .....+...... .........          ..............   .-.....+.+++.+|+..||++|||+++++.
T Consensus       209 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~  287 (291)
T cd07870         209 DVFEQLEKIWTV-LGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL  287 (291)
T ss_pred             hHHHHHHHHHHH-cCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence            211111111000 000000000          00000000000000   0011356789999999999999999999875

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.82  E-value=1.1e-19  Score=133.46  Aligned_cols=145  Identities=14%  Similarity=0.118  Sum_probs=88.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCC-CCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKP-TDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p-~~~~   79 (164)
                      |+|||++.++.+||+|||+++.+..... .......|+..|++||. ..+..++.++||||+||++|+|++|..+ +...
T Consensus       295 P~NILl~~~~~vkL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~-~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~  372 (501)
T PHA03210        295 LENIFLNCDGKIVLGDFGTAMPFEKERE-AFDYGWVGTVATNSPEI-LAGDGYCEITDIWSCGLILLDMLSHDFCPIGDG  372 (501)
T ss_pred             HHHEEECCCCCEEEEeCCCceecCcccc-cccccccCCcCCCCchh-hcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCC
Confidence            6899999999999999999987632211 11223568999999954 4556688899999999999999998754 3321


Q ss_pred             ccCc-hhHHHHHHHhh--h-------hhhHHHhhhhcccccc---hhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHH
Q 039452           80 FSGE-MTLKRWINDLL--S-------VSVMEVVDANLLTRED---RHFAAKQQCVSFVFNLAMECTIESPERRINAKEIV  146 (164)
Q Consensus        80 ~~~~-~~~~~~~~~~~--~-------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl  146 (164)
                      .... ..+...+....  .       ....+.+.........   ........++..+.+++.+||++||.+|||+.+++
T Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL  452 (501)
T PHA03210        373 GGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELL  452 (501)
T ss_pred             CCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHh
Confidence            1111 11211111100  0       0011111111110000   00001112345577889999999999999999998


Q ss_pred             H
Q 039452          147 T  147 (164)
Q Consensus       147 ~  147 (164)
                      .
T Consensus       453 ~  453 (501)
T PHA03210        453 A  453 (501)
T ss_pred             h
Confidence            6

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.82  E-value=1.1e-20  Score=132.18  Aligned_cols=124  Identities=19%  Similarity=0.282  Sum_probs=83.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||++......  ........|++.|+|||.+ ....++.++|+||+|+++|+|++|..||....
T Consensus       124 p~Nili~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslGvil~ell~g~~pf~~~~  200 (327)
T cd05617         124 LDNVLLDADGHIKLTDYGMCKEGLGP--GDTTSTFCGTPNYIAPEIL-RGEEYGFSVDWWALGVLMFEMMAGRSPFDIIT  200 (327)
T ss_pred             HHHEEEeCCCCEEEeccccceeccCC--CCceecccCCcccCCHHHH-CCCCCCchheeehhHHHHHHHHhCCCCCCccC
Confidence            68999999999999999998753211  1122345689999999544 45667889999999999999999999996432


Q ss_pred             cCch-hHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCH
Q 039452           81 SGEM-TLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINA  142 (164)
Q Consensus        81 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  142 (164)
                      .... .......       ......        ....+..++..+.+++.+||+.||++|+++
T Consensus       201 ~~~~~~~~~~~~-------~~~~~~--------~~~~p~~~~~~~~~li~~~L~~dP~~R~~~  248 (327)
T cd05617         201 DNPDMNTEDYLF-------QVILEK--------PIRIPRFLSVKASHVLKGFLNKDPKERLGC  248 (327)
T ss_pred             CCcccccHHHHH-------HHHHhC--------CCCCCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence            2111 0000000       000000        011222345568899999999999999985

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.82  E-value=3.8e-20  Score=125.88  Aligned_cols=131  Identities=23%  Similarity=0.445  Sum_probs=89.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccc-cccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMT-QTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~   78 (164)
                      |+||+++.++.++++|||.++.+........ .....++..|++|| ......++.++|+||+|+++|++++ |..||..
T Consensus       134 p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe-~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~  212 (267)
T cd05066         134 ARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPE-AIAYRKFTSASDVWSYGIVMWEVMSYGERPYWE  212 (267)
T ss_pred             hhcEEECCCCeEEeCCCCcccccccccceeeecCCCccceeecCHh-HhccCccCchhhhHHHHHHHHHHhcCCCCCccc
Confidence            6899999999999999999887532211111 11122346799995 4445567889999999999999886 9999864


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI  152 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~  152 (164)
                      .....  ....            +....      ..+.+..++..+.+++.+||+.+|.+|||+.++++.|..+
T Consensus       213 ~~~~~--~~~~------------~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         213 MSNQD--VIKA------------IEEGY------RLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             CCHHH--HHHH------------HhCCC------cCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence            32111  1000            00000      0111223455688999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.82  E-value=7.4e-20  Score=128.17  Aligned_cols=145  Identities=21%  Similarity=0.196  Sum_probs=89.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc--cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS--MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+||+++.++.++|+|||.++.+......  .......++..|++||.......++.++|+||+|+++|++++|..||..
T Consensus       133 p~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~  212 (332)
T cd07857         133 PGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKG  212 (332)
T ss_pred             HHHeEEcCCCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCC
Confidence            68999999999999999998765321111  1122346788999996665445678899999999999999999999864


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhh-----------cccccchh-hhhHHHHHHHHHHHHhhccccCccCCCCHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDAN-----------LLTREDRH-FAAKQQCVSFVFNLAMECTIESPERRINAKEIV  146 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~-~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl  146 (164)
                      ... ........... .....+.+...           ........ ......++..+.+++.+||+.||++|||+++++
T Consensus       213 ~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll  290 (332)
T cd07857         213 KDY-VDQLNQILQVL-GTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEAL  290 (332)
T ss_pred             CCH-HHHHHHHHHHh-CCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHh
Confidence            221 11111111100 00000000000           00000000 001112345688999999999999999999987


Q ss_pred             H
Q 039452          147 T  147 (164)
Q Consensus       147 ~  147 (164)
                      .
T Consensus       291 ~  291 (332)
T cd07857         291 E  291 (332)
T ss_pred             c
Confidence            5

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=4.6e-21  Score=134.13  Aligned_cols=125  Identities=21%  Similarity=0.248  Sum_probs=84.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.++|+|||+++.....  ........|+..|+|||.+.....++.++|+||+||++|+|++|..||....
T Consensus       124 p~Nili~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~  201 (330)
T cd05586         124 PENILLDATGHIALCDFGLSKANLTD--NKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAED  201 (330)
T ss_pred             HHHeEECCCCCEEEecCCcCcCCCCC--CCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCC
Confidence            68999999999999999998653211  1122345689999999766555557889999999999999999999986421


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCC----CHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRI----NAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp----s~~~vl~  147 (164)
                      ...     ...        .+.. .....  .    ...++..+.+++.+||+.||.+||    ++.++++
T Consensus       202 ~~~-----~~~--------~i~~-~~~~~--~----~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~  252 (330)
T cd05586         202 TQQ-----MYR--------NIAF-GKVRF--P----KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE  252 (330)
T ss_pred             HHH-----HHH--------HHHc-CCCCC--C----CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence            110     000        0000 00000  0    012345578999999999999998    4555554

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.82  E-value=5.1e-20  Score=126.37  Aligned_cols=144  Identities=20%  Similarity=0.241  Sum_probs=89.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.+........ .......++..|++||.......++.++|+||+|+++|++++|..||....
T Consensus       128 ~~ni~~~~~~~~kl~d~g~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~  206 (288)
T cd07833         128 PENILVSESGVLKLCDFGFARALRARPA-SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDS  206 (288)
T ss_pred             HHHeEECCCCCEEEEeeecccccCCCcc-ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            5799999999999999999877532221 122335677889999665544367889999999999999999999986432


Q ss_pred             cCchhHHHHHHHhhhhhh---HHHhhh-hcc-c----ccc----hhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSV---MEVVDA-NLL-T----RED----RHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~---~~~~~~-~~~-~----~~~----~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ... .... .........   ...... ... .    ...    .....+..++..+.+++.+||..+|++|||+++++.
T Consensus       207 ~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         207 DID-QLYL-IQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             HHH-HHHH-HHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence            111 1110 000000000   000000 000 0    000    000112234677999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.82  E-value=6.3e-20  Score=129.09  Aligned_cols=140  Identities=22%  Similarity=0.242  Sum_probs=88.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.+......     .....++..|++||.+......+.++|+||+|+++|++++|..||....
T Consensus       146 p~Nill~~~~~~kL~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~  220 (343)
T cd07851         146 PSNIAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSD  220 (343)
T ss_pred             HHHeEECCCCCEEEcccccccccccc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence            67999999999999999998765211     2234567889999666544467789999999999999999999986422


Q ss_pred             cCchhHHHHHHHhhhhhhHHH------------hhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEV------------VDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .. ..+.... .........+            +..................+..+.+++.+||+.+|++|||+.+++.
T Consensus       221 ~~-~~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~  297 (343)
T cd07851         221 HI-DQLKRIM-NLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA  297 (343)
T ss_pred             hH-HHHHHHH-HhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence            11 1111111 1000001111            1100000000001111234567899999999999999999999876

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.82  E-value=3.3e-20  Score=125.39  Aligned_cols=127  Identities=25%  Similarity=0.469  Sum_probs=86.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.++|+|||.++...... ........++..|++||.. ....++.++|+||+|+++|++++ |..||...
T Consensus       128 p~ni~i~~~~~~~l~d~g~~~~~~~~~-~~~~~~~~~~~~~~aPe~~-~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~  205 (256)
T cd05112         128 ARNCLVGENQVVKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWSSPEVF-SFSKYSSKSDVWSFGVLMWEVFSEGKTPYENR  205 (256)
T ss_pred             cceEEEcCCCeEEECCCcceeecccCc-ccccCCCccchhhcCHhHh-ccCCcChHHHHHHHHHHHHHHHcCCCCCCCcC
Confidence            689999999999999999987642211 1111223345689999544 45567889999999999999998 88888642


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTEL  149 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l  149 (164)
                      ....  ..            +.+......      ..+...+..+.+++.+||..+|++|||+.++++.|
T Consensus       206 ~~~~--~~------------~~~~~~~~~------~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l  255 (256)
T cd05112         206 SNSE--VV------------ETINAGFRL------YKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQL  255 (256)
T ss_pred             CHHH--HH------------HHHhCCCCC------CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence            2111  00            000100000      00111245588999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.82  E-value=2.5e-20  Score=128.45  Aligned_cols=126  Identities=21%  Similarity=0.259  Sum_probs=86.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||++.......  .......++..|+|||. .....++.++|+||+|+++|++++|..||....
T Consensus       146 p~Nill~~~~~~kL~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~-~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~  222 (292)
T cd06658         146 SDSILLTSDGRIKLSDFGFCAQVSKEV--PKRKSLVGTPYWMAPEV-ISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEP  222 (292)
T ss_pred             HHHEEEcCCCCEEEccCcchhhccccc--ccCceeecCccccCHHH-HccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            679999999999999999987542211  11223457889999954 445567889999999999999999999986421


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ...  ..           .. +....    ..........+..+.+++.+||..||.+|||++++++
T Consensus       223 ~~~--~~-----------~~-~~~~~----~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~  271 (292)
T cd06658         223 PLQ--AM-----------RR-IRDNL----PPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQ  271 (292)
T ss_pred             HHH--HH-----------HH-HHhcC----CCccccccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            100  00           00 00000    0000011123445788999999999999999999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.82  E-value=3.2e-20  Score=125.41  Aligned_cols=124  Identities=25%  Similarity=0.449  Sum_probs=86.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.++|+|||.+......     ......+..|++||. .....++.++|+||+|+++|++++ |..||...
T Consensus       128 p~nili~~~~~~kl~Dfg~~~~~~~~-----~~~~~~~~~y~~pe~-~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~  201 (254)
T cd05083         128 ARNILVSEDGVAKVSDFGLARVGSMG-----VDNSKLPVKWTAPEA-LKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKM  201 (254)
T ss_pred             cceEEEcCCCcEEECCCccceecccc-----CCCCCCCceecCHHH-hccCCcCchhhHHHHHHHHHHHHhCCCCCCccC
Confidence            78999999999999999998753111     112234567999954 445567889999999999999997 88888643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELS  150 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~  150 (164)
                      ....  .            ...+.....      ...+..++..+.+++.+||+.+|++||+++++++.|+
T Consensus       202 ~~~~--~------------~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  252 (254)
T cd05083         202 SLKE--V------------KECVEKGYR------MEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLE  252 (254)
T ss_pred             CHHH--H------------HHHHhCCCC------CCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHc
Confidence            2111  0            011111100      0011234566889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.82  E-value=1.9e-20  Score=128.80  Aligned_cols=75  Identities=31%  Similarity=0.488  Sum_probs=62.7

Q ss_pred             CcceEecCC------ceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCC
Q 039452            1 PSNVLLDDN------MVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKK   74 (164)
Q Consensus         1 p~Nill~~~------~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~   74 (164)
                      |.||||+..      -.+||+|||+|+.+.   .........|++.|||| |+.....++.++|+||+|+++|++++|+.
T Consensus       137 PQNiLLs~~~~~~~~~~LKIADFGfAR~L~---~~~~a~tlcGSplYMAP-EV~~~~~YdAKADLWSiG~Ilyq~l~g~~  212 (429)
T KOG0595|consen  137 PQNILLSTTARNDTSPVLKIADFGFARFLQ---PGSMAETLCGSPLYMAP-EVIMSQQYDAKADLWSIGTILYQCLTGKP  212 (429)
T ss_pred             cceEEeccCCCCCCCceEEecccchhhhCC---chhHHHHhhCCccccCH-HHHHhccccchhhHHHHHHHHHHHHhCCC
Confidence            789999754      468999999999872   33345567899999999 55557779999999999999999999999


Q ss_pred             CCCcc
Q 039452           75 PTDEM   79 (164)
Q Consensus        75 p~~~~   79 (164)
                      ||...
T Consensus       213 Pf~a~  217 (429)
T KOG0595|consen  213 PFDAE  217 (429)
T ss_pred             Ccccc
Confidence            99753

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=3.1e-20  Score=127.10  Aligned_cols=128  Identities=20%  Similarity=0.335  Sum_probs=87.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhh----ccCcccCccchHhHHHHHHHHHhcCCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYG----REGRVSTNGDVYSFGIMLMEAFTRKKPT   76 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~----~~~~~~~~~Di~s~g~~~~~~~~g~~p~   76 (164)
                      |+||+++.++.++|+|||.+.....  .........++..|++||.+.    ....++.++|+||+|+++|++++|..||
T Consensus       131 p~nili~~~~~~~l~d~g~~~~~~~--~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~  208 (280)
T cd06611         131 AGNILLTLDGDVKLADFGVSAKNKS--TLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPH  208 (280)
T ss_pred             hhhEEECCCCCEEEccCccchhhcc--cccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCc
Confidence            6899999999999999998765421  111223345788899996653    2334677899999999999999999998


Q ss_pred             CccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHH
Q 039452           77 DEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTE  148 (164)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  148 (164)
                      ........     ..        ....     ........+..++..+.+++.+||+.+|.+||++.++++.
T Consensus       209 ~~~~~~~~-----~~--------~~~~-----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  262 (280)
T cd06611         209 HELNPMRV-----LL--------KILK-----SEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH  262 (280)
T ss_pred             ccCCHHHH-----HH--------HHhc-----CCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence            64321110     00        0000     0001111223345568899999999999999999999763

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.82  E-value=6.3e-20  Score=126.23  Aligned_cols=144  Identities=21%  Similarity=0.195  Sum_probs=86.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.++....  .........++..|++||.+.....++.++|+||+|+++|+|++|..||....
T Consensus       131 p~nil~~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~  208 (291)
T cd07844         131 PQNLLISERGELKLADFGLARAKSV--PSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGST  208 (291)
T ss_pred             HHHEEEcCCCCEEECccccccccCC--CCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCc
Confidence            6799999999999999999865311  11111223467789999666544557889999999999999999999986433


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcc----------cc-cchhhhhHHHHH--HHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLL----------TR-EDRHFAAKQQCV--SFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~-~~~~~~~~~~~~--~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .......... ................          .. ............  ..+.+++.+||+.+|++|||+++++.
T Consensus       209 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~  287 (291)
T cd07844         209 DVEDQLHKIF-RVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK  287 (291)
T ss_pred             cHHHHHHHHH-HhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence            1111111111 1100000010000000          00 000000001122  56789999999999999999999875

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.82  E-value=1.2e-19  Score=124.31  Aligned_cols=142  Identities=18%  Similarity=0.216  Sum_probs=88.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |.||+++.++.++|+|||.+.......   ......++..|++||.+.....++.++|+||||++++++++|..||....
T Consensus       127 ~~ni~i~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~  203 (283)
T cd07830         127 PENLLVSGPEVVKIADFGLAREIRSRP---PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSS  203 (283)
T ss_pred             hhhEEEcCCCCEEEeecccceeccCCC---CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCC
Confidence            689999999999999999987652211   22334578889999766555567889999999999999999999986432


Q ss_pred             cCchhHHHHHHHhhhhhh----HHH------hhhhcccc-cchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSV----MEV------VDANLLTR-EDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~----~~~------~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .... ..... .......    .+.      .+...... ...........+..+.+++.+||+.+|++|||+++++.
T Consensus       204 ~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  279 (283)
T cd07830         204 EIDQ-LYKIC-SVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ  279 (283)
T ss_pred             hHHH-HHHHH-HhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence            2111 11100 0000000    000      00000000 00000111122466889999999999999999999875

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.82  E-value=9.3e-20  Score=123.17  Aligned_cols=125  Identities=23%  Similarity=0.295  Sum_probs=87.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||.+.......  .......++..|.+||.. .+..++.++|+||+|+++|++++|..||....
T Consensus       129 p~ni~~~~~~~~kl~d~~~~~~~~~~~--~~~~~~~~~~~y~ape~~-~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~  205 (256)
T cd08221         129 TLNIFLTKAGLIKLGDFGISKILGSEY--SMAETVVGTPYYMSPELC-QGVKYNFKSDIWALGCVLYELLTLKRTFDATN  205 (256)
T ss_pred             hHhEEEeCCCCEEECcCcceEEccccc--ccccccCCCccccCHhhc-CCCCCCCcchhHHHHHHHHHHHHCCCCCCCCC
Confidence            689999999999999999987652222  122345678899999544 44457788999999999999999999986421


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTE  148 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  148 (164)
                      ..                 +...........   ..+..++..+.+++.+||+.+|++|||++++++.
T Consensus       206 ~~-----------------~~~~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~  253 (256)
T cd08221         206 PL-----------------NLVVKIVQGNYT---PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ  253 (256)
T ss_pred             HH-----------------HHHHHHHcCCCC---CCccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence            10                 001000000000   0113345568899999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.81  E-value=2.1e-20  Score=130.44  Aligned_cols=120  Identities=26%  Similarity=0.331  Sum_probs=85.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||+|.+|+++|+|+|+|..+..+..   ....+||.+|||| +++....++...|.|++||++|+|+.|+.||....
T Consensus       315 PeNILLDd~GhvRISDLGLAvei~~g~~---~~~rvGT~GYMAP-Evl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~K  390 (591)
T KOG0986|consen  315 PENILLDDHGHVRISDLGLAVEIPEGKP---IRGRVGTVGYMAP-EVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRK  390 (591)
T ss_pred             hhheeeccCCCeEeeccceEEecCCCCc---cccccCcccccCH-HHHcCCcccCCccHHHHHhHHHHHHcccCchhhhh
Confidence            7999999999999999999988743222   2334899999999 55555559999999999999999999999996421


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCC
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRIN  141 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps  141 (164)
                      ....              .+-++.....   .....+...++++.++....|..||++|..
T Consensus       391 eKvk--------------~eEvdrr~~~---~~~ey~~kFS~eakslc~~LL~Kdp~~RLG  434 (591)
T KOG0986|consen  391 EKVK--------------REEVDRRTLE---DPEEYSDKFSEEAKSLCEGLLTKDPEKRLG  434 (591)
T ss_pred             hhhh--------------HHHHHHHHhc---chhhcccccCHHHHHHHHHHHccCHHHhcc
Confidence            1110              0011111111   111123455677889999999999999864

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.81  E-value=8.3e-20  Score=126.61  Aligned_cols=146  Identities=18%  Similarity=0.171  Sum_probs=88.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc---------cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS---------MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT   71 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~---------~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~   71 (164)
                      |+||+++.++.++|+|||+++........         .......++..|++||.+.....++.++|+||+|+++|++++
T Consensus       143 p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~  222 (311)
T cd07866         143 AANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFT  222 (311)
T ss_pred             HHHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHh
Confidence            67999999999999999998765321111         011223567889999766555557889999999999999999


Q ss_pred             cCCCCCccccCchhHHHHHHHhhhhh---hH--HHhhh----hcc-cccchhhhhHHHHHHHHHHHHhhccccCccCCCC
Q 039452           72 RKKPTDEMFSGEMTLKRWINDLLSVS---VM--EVVDA----NLL-TREDRHFAAKQQCVSFVFNLAMECTIESPERRIN  141 (164)
Q Consensus        72 g~~p~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~----~~~-~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps  141 (164)
                      |..||...... ..............   ..  ..+..    ... ..............+.+.+++.+||+.||++|||
T Consensus       223 g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t  301 (311)
T cd07866         223 RRPILQGKSDI-DQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLT  301 (311)
T ss_pred             CCCCCCCCCHH-HHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcC
Confidence            99998643221 11111111000000   00  00000    000 0000001111233466889999999999999999


Q ss_pred             HHHHHH
Q 039452          142 AKEIVT  147 (164)
Q Consensus       142 ~~~vl~  147 (164)
                      +.+++.
T Consensus       302 ~~ell~  307 (311)
T cd07866         302 ASDALE  307 (311)
T ss_pred             HHHHhc
Confidence            998875

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.81  E-value=4.3e-20  Score=125.42  Aligned_cols=121  Identities=21%  Similarity=0.311  Sum_probs=82.4

Q ss_pred             CcceEecCCce-------EEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHH-hc
Q 039452            1 PSNVLLDDNMV-------AHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAF-TR   72 (164)
Q Consensus         1 p~Nill~~~~~-------~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~-~g   72 (164)
                      |+|||++.++.       ++++|||.+..+..      .....++..|+|||.+.....++.++||||+|+++|+++ .|
T Consensus       133 p~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~  206 (262)
T cd05077         133 TKNILLAREGIDGECGPFIKLSDPGIPITVLS------RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNG  206 (262)
T ss_pred             cccEEEecCCccCCCCceeEeCCCCCCccccC------cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCC
Confidence            78999986553       89999998865421      123356788999965554566888999999999999997 57


Q ss_pred             CCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHH
Q 039452           73 KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTEL  149 (164)
Q Consensus        73 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l  149 (164)
                      ..|+........              ..+......        ........+.+++.+||+.||.+||++.++++.+
T Consensus       207 ~~p~~~~~~~~~--------------~~~~~~~~~--------~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~  261 (262)
T cd05077         207 EIPLKDKTLAEK--------------ERFYEGQCM--------LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI  261 (262)
T ss_pred             CCCCCCcchhHH--------------HHHHhcCcc--------CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence            777753211110              000000000        0011234578999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.81  E-value=1.3e-19  Score=125.88  Aligned_cols=142  Identities=18%  Similarity=0.266  Sum_probs=89.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc-----cccccccccccccCchhhhcc-CcccCccchHhHHHHHHHHHhcCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS-----MTQTQTLATIGYMAPVEYGRE-GRVSTNGDVYSFGIMLMEAFTRKK   74 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~-~~~~~~~Di~s~g~~~~~~~~g~~   74 (164)
                      |+||+++.++.++++|||.+..+......     .......++..|++||.+... ..++.++|+||+|+++|++++|..
T Consensus       129 ~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~  208 (314)
T cd08216         129 ASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHV  208 (314)
T ss_pred             cceEEEecCCceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCC
Confidence            68999999999999999988765321111     111223466789999665432 347788999999999999999999


Q ss_pred             CCCccccCchhHHHHHHHhhhhhhHHHhhhhc------------------ccccchhhhhHHHHHHHHHHHHhhccccCc
Q 039452           75 PTDEMFSGEMTLKRWINDLLSVSVMEVVDANL------------------LTREDRHFAAKQQCVSFVFNLAMECTIESP  136 (164)
Q Consensus        75 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  136 (164)
                      ||.............     .......+....                  ..............+..+.+++.+||+.||
T Consensus       209 pf~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P  283 (314)
T cd08216         209 PFKDMPATQMLLEKV-----RGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDP  283 (314)
T ss_pred             CCCCCCHHHHHHHHH-----hccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCC
Confidence            997532222111110     000000000000                  000111122233456678899999999999


Q ss_pred             cCCCCHHHHHH
Q 039452          137 ERRINAKEIVT  147 (164)
Q Consensus       137 ~~Rps~~~vl~  147 (164)
                      ++|||++++++
T Consensus       284 ~~Rpt~~~ll~  294 (314)
T cd08216         284 ESRPSASQLLN  294 (314)
T ss_pred             CcCcCHHHHhc
Confidence            99999999987

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.81  E-value=4.7e-20  Score=126.58  Aligned_cols=126  Identities=21%  Similarity=0.326  Sum_probs=86.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccC-----cccCccchHhHHHHHHHHHhcCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREG-----RVSTNGDVYSFGIMLMEAFTRKKP   75 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-----~~~~~~Di~s~g~~~~~~~~g~~p   75 (164)
                      |+||+++.++.++|+|||.+..+...    ......++..|++||.+....     .++.++|+||+||++|++++|..|
T Consensus       131 p~nil~~~~~~~~l~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~p  206 (286)
T cd06622         131 PTNVLVNGNGQVKLCDFGVSGNLVAS----LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYP  206 (286)
T ss_pred             HHHEEECCCCCEEEeecCCcccccCC----ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCC
Confidence            67999999999999999998764211    122345778899996553221     247789999999999999999999


Q ss_pred             CCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           76 TDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      |.......  ..            ..+.....   ......+..++..+.+++.+||+.+|++||++++++.
T Consensus       207 f~~~~~~~--~~------------~~~~~~~~---~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  261 (286)
T cd06622         207 YPPETYAN--IF------------AQLSAIVD---GDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE  261 (286)
T ss_pred             CCCcchhh--HH------------HHHHHHhh---cCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence            86421111  00            00000000   0011122335667889999999999999999999987

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.81  E-value=5.9e-20  Score=125.82  Aligned_cols=125  Identities=22%  Similarity=0.302  Sum_probs=87.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++++|||++......    ......++..|++||.......++.++|+||+|++++++++|..||....
T Consensus       125 p~Nil~~~~~~~~l~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~  200 (279)
T cd05633         125 PANILLDEHGHVRISDLGLACDFSKK----KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHK  200 (279)
T ss_pred             HHHEEECCCCCEEEccCCcceecccc----CccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCC
Confidence            68999999999999999998754211    11234688999999665444557889999999999999999999996432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCC-----CHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRI-----NAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~vl~  147 (164)
                      .......               +....   ......+...+..+.+++.+||+.||++||     |++++++
T Consensus       201 ~~~~~~~---------------~~~~~---~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~  254 (279)
T cd05633         201 TKDKHEI---------------DRMTL---TVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKE  254 (279)
T ss_pred             CcCHHHH---------------HHHhh---cCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence            2211100               00000   001112233456688999999999999999     5888876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.81  E-value=4.2e-20  Score=125.17  Aligned_cols=124  Identities=21%  Similarity=0.324  Sum_probs=87.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||.+.......  .......++..|++||.+ .....+.++|+||+|++++++++|..||....
T Consensus       138 p~nili~~~~~~kl~d~g~~~~~~~~~--~~~~~~~~~~~~~~pE~~-~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~  214 (265)
T cd08217         138 PANIFLDANNNVKLGDFGLAKILGHDS--SFAKTYVGTPYYMSPEQL-NHMSYDEKSDIWSLGCLIYELCALSPPFTARN  214 (265)
T ss_pred             HHHEEEecCCCEEEecccccccccCCc--ccccccccCCCccChhhh-cCCCCCchhHHHHHHHHHHHHHHCCCcccCcC
Confidence            679999999999999999987753211  112334678899999544 45557888999999999999999999986432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                        .....            ..+.....      ...+...+..+.+++.+||+.+|++|||++++++
T Consensus       215 --~~~~~------------~~~~~~~~------~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~  261 (265)
T cd08217         215 --QLQLA------------SKIKEGKF------RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ  261 (265)
T ss_pred             --HHHHH------------HHHhcCCC------CCCccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence              11111            11111110      1112234566899999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.81  E-value=1.5e-20  Score=133.11  Aligned_cols=122  Identities=22%  Similarity=0.258  Sum_probs=83.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCC----------------C-----cc-----c-------------------cccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGED----------------Q-----SM-----T-------------------QTQT   35 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~----------------~-----~~-----~-------------------~~~~   35 (164)
                      |+|+|||..|++||+|||++..+....                .     ..     .                   .-..
T Consensus       269 PdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~St  348 (550)
T KOG0605|consen  269 PDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYST  348 (550)
T ss_pred             hhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcc
Confidence            799999999999999999985432100                0     00     0                   0124


Q ss_pred             cccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhh
Q 039452           36 LATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA  115 (164)
Q Consensus        36 ~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (164)
                      +|||.|+|||++. +..++...|.||+|||+|||+.|.+||....+...             ..++++...    ....+
T Consensus       349 VGTPDYiAPEVll-~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T-------------~rkI~nwr~----~l~fP  410 (550)
T KOG0605|consen  349 VGTPDYIAPEVLL-GKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQET-------------YRKIVNWRE----TLKFP  410 (550)
T ss_pred             cCCccccchHHHh-cCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHH-------------HHHHHHHhh----hccCC
Confidence            7999999995555 55588999999999999999999999985433221             122222211    11112


Q ss_pred             hHHHHHHHHHHHHhhccccCccCCCC
Q 039452          116 AKQQCVSFVFNLAMECTIESPERRIN  141 (164)
Q Consensus       116 ~~~~~~~~~~~l~~~cl~~~p~~Rps  141 (164)
                      ....+.+++.+++.+|+. ||++|..
T Consensus       411 ~~~~~s~eA~DLI~rll~-d~~~RLG  435 (550)
T KOG0605|consen  411 EEVDLSDEAKDLITRLLC-DPENRLG  435 (550)
T ss_pred             CcCcccHHHHHHHHHHhc-CHHHhcC
Confidence            223344779999999999 9999975

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.81  E-value=8.5e-20  Score=125.12  Aligned_cols=145  Identities=22%  Similarity=0.232  Sum_probs=89.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.+........ .......++..|++||.+.....++.++|+||+|+++|++++|..||....
T Consensus       128 p~nil~~~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~  206 (287)
T cd07840         128 GSNILINNDGVLKLADFGLARPYTKRNS-ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGST  206 (287)
T ss_pred             HHHeEEcCCCCEEEccccceeeccCCCc-ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            6799999999999999999887532221 112234567789999656544557889999999999999999999987533


Q ss_pred             cCchhHHHHHHHhhhh---hhHHHhh----hhccccc--ch-hhhhHHH-HHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSV---SVMEVVD----ANLLTRE--DR-HFAAKQQ-CVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~---~~~~~~~----~~~~~~~--~~-~~~~~~~-~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .. .............   ......+    .......  .. ....... ++..+.+++.+||+.+|.+||+++++++
T Consensus       207 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  283 (287)
T cd07840         207 EL-EQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ  283 (287)
T ss_pred             hH-HHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            21 1111111100000   0000000    0000000  00 0001111 3667899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.81  E-value=1.3e-19  Score=123.46  Aligned_cols=134  Identities=19%  Similarity=0.334  Sum_probs=82.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhc------cCcccCccchHhHHHHHHHHHh-cC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGR------EGRVSTNGDVYSFGIMLMEAFT-RK   73 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~------~~~~~~~~Di~s~g~~~~~~~~-g~   73 (164)
                      |+|||++.++.++|+|||++................++..|++||.+..      ....+.++|+||||+++|++++ +.
T Consensus       127 p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~  206 (268)
T cd05086         127 LRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAA  206 (268)
T ss_pred             cceEEEcCCccEEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCC
Confidence            6899999999999999998764311111111223456788999965432      1235678999999999999997 46


Q ss_pred             CCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHH
Q 039452           74 KPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELS  150 (164)
Q Consensus        74 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~  150 (164)
                      .||......     ...............          ...........+.+++..|| .+|.+|||++++++.|.
T Consensus       207 ~p~~~~~~~-----~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         207 QPYSHLSDR-----EVLNHVIKDQQVKLF----------KPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             CCCCCCCHH-----HHHHHHHhhcccccC----------CCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence            677532110     011111000000000          01111123455788999999 68999999999988763

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.81  E-value=2.9e-20  Score=129.82  Aligned_cols=118  Identities=20%  Similarity=0.308  Sum_probs=82.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||+++....  .........|+..|+|||.+ ....++.++|+||+||++|++++|..||....
T Consensus       129 p~Nill~~~~~ikL~Dfg~~~~~~~--~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslGvil~elltG~~pf~~~~  205 (323)
T cd05615         129 LDNVMLDSEGHIKIADFGMCKEHMV--DGVTTRTFCGTPDYIAPEII-AYQPYGKSVDWWAYGVLLYEMLAGQPPFDGED  205 (323)
T ss_pred             HHHeEECCCCCEEEeccccccccCC--CCccccCccCCccccCHHHH-cCCCCCCccchhhhHHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999875321  11122334588999999544 45668889999999999999999999997432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINA  142 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  142 (164)
                      ...  ..           ..+....        ...+..++..+.+++.+||+.+|.+|++.
T Consensus       206 ~~~--~~-----------~~i~~~~--------~~~p~~~~~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05615         206 EDE--LF-----------QSIMEHN--------VSYPKSLSKEAVSICKGLMTKHPSKRLGC  246 (323)
T ss_pred             HHH--HH-----------HHHHhCC--------CCCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence            110  00           0111100        01122344568899999999999999975

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.81  E-value=3.3e-20  Score=125.37  Aligned_cols=124  Identities=19%  Similarity=0.234  Sum_probs=86.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++++|||.+......  ........++..|++|| +......+.++|+||+|++++++++|..||....
T Consensus       129 ~~nil~~~~~~~~l~d~~~~~~~~~~--~~~~~~~~~~~~~~~pe-~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~  205 (256)
T cd08218         129 SQNIFLTKDGTIKLGDFGIARVLNST--VELARTCIGTPYYLSPE-ICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGN  205 (256)
T ss_pred             HHHEEEcCCCCEEEeeccceeecCcc--hhhhhhccCCccccCHH-HhCCCCCCCccchhHHHHHHHHHHcCCCCccCCC
Confidence            57999999999999999998765221  11122345778899994 4455667889999999999999999999986321


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ..                 +..........   ...+..++..+.+++.+||+.+|++||++++|++
T Consensus       206 ~~-----------------~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~  252 (256)
T cd08218         206 MK-----------------NLVLKIIRGSY---PPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE  252 (256)
T ss_pred             HH-----------------HHHHHHhcCCC---CCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence            10                 11111110000   0112334556899999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.81  E-value=7.3e-20  Score=123.62  Aligned_cols=127  Identities=29%  Similarity=0.547  Sum_probs=86.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.++++|||.+......... ......++..|++||.. .....+.++|+||+|++++++++ |..||...
T Consensus       131 ~~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~~Pe~~-~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~  208 (258)
T smart00219      131 ARNCLVGENLVVKISDFGLSRDLYDDDYY-KKKGGKLPIRWMAPESL-KDGKFTSKSDVWSFGVLLWEIFTLGESPYPGM  208 (258)
T ss_pred             cceEEEccCCeEEEcccCCceeccccccc-ccccCCCcccccChHHh-ccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Confidence            68999999999999999998765322111 11123367789999655 55667889999999999999998 77887542


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTEL  149 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l  149 (164)
                      ..  ....            ..+.....      ...+..++..+.+++.+||..+|++|||+.++++.|
T Consensus       209 ~~--~~~~------------~~~~~~~~------~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      209 SN--EEVL------------EYLKKGYR------LPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             CH--HHHH------------HHHhcCCC------CCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence            11  1000            00111000      011122456689999999999999999999998754

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.81  E-value=1.4e-19  Score=127.26  Aligned_cols=146  Identities=16%  Similarity=0.174  Sum_probs=88.3

Q ss_pred             CcceEec-CCceEEEeccccceeccCCCCc-cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLD-DNMVAHLSDFGIAKLLIGEDQS-MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~-~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+||+++ .++.++++|||.++.+...... .......++..|+|||.+.....++.++|+||+||++|++++|..||..
T Consensus       142 p~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~  221 (342)
T cd07854         142 PANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAG  221 (342)
T ss_pred             HHHEEEcCCCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            5799997 4567899999998765221111 1112235678899997665555678899999999999999999999964


Q ss_pred             cccCchhHHHHHHHhhh----------hhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLS----------VSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ...... ..........          .........................+.++.+++.+||+.||++|||+++++.
T Consensus       222 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  299 (342)
T cd07854         222 AHELEQ-MQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM  299 (342)
T ss_pred             CCHHHH-HHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence            322111 1000000000          0000000000000011111111235567889999999999999999999985

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.81  E-value=1.4e-19  Score=124.12  Aligned_cols=145  Identities=17%  Similarity=0.194  Sum_probs=89.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.+..+..... .......++..|++||.+.....++.++|+||+|++++++++|..+|....
T Consensus       127 p~ni~~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~  205 (286)
T cd07832         127 PANLLISADGVLKIADFGLARLFSEEEP-RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEN  205 (286)
T ss_pred             HHHEEEcCCCcEEEeeeeecccccCCCC-CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCC
Confidence            5799999999999999999876532211 122345678899999766555557889999999999999999987775322


Q ss_pred             cCchhHHHHHHHhhhh---hhHHHh-----hhhccccc-c-hhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSV---SVMEVV-----DANLLTRE-D-RHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~---~~~~~~-----~~~~~~~~-~-~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .. ..+..........   ...+..     ........ . .........+..+.+++.+||+.+|.+|||+++++.
T Consensus       206 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~  281 (286)
T cd07832         206 DI-EQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR  281 (286)
T ss_pred             HH-HHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            11 1111111100000   000000     00000000 0 000111234567899999999999999999999876

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.81  E-value=8.1e-20  Score=126.69  Aligned_cols=122  Identities=25%  Similarity=0.356  Sum_probs=85.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhh--ccCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYG--REGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~--~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+||+++.++.++|+|||.+.....      .....++..|++||.+.  ....++.++|+||||+++|++++|..||..
T Consensus       143 p~nIl~~~~~~~kL~dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~  216 (307)
T cd06607         143 AGNILLTEPGTVKLADFGSASLVSP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN  216 (307)
T ss_pred             cccEEECCCCCEEEeecCcceecCC------CCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCC
Confidence            6899999999999999998875411      12345678899996553  234577899999999999999999999864


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ......  .           .....      .......+..++..+.+++.+||+.+|++||++.+++.
T Consensus       217 ~~~~~~--~-----------~~~~~------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  266 (307)
T cd06607         217 MNAMSA--L-----------YHIAQ------NDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLK  266 (307)
T ss_pred             ccHHHH--H-----------HHHhc------CCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            211110  0           00000      00000111234556899999999999999999999986

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.81  E-value=4e-21  Score=133.84  Aligned_cols=120  Identities=24%  Similarity=0.318  Sum_probs=83.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||++......  ........|+..|++||. .....++.++|+||+||++|+|++|..||....
T Consensus       126 p~Nil~~~~~~~kL~Dfg~~~~~~~~--~~~~~~~~g~~~y~aPE~-~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~  202 (318)
T cd05582         126 PENILLDEEGHIKLTDFGLSKESIDH--EKKAYSFCGTVEYMAPEV-VNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKD  202 (318)
T ss_pred             HHHeEECCCCcEEEeeccCCcccCCC--CCceecccCChhhcCHHH-HcCCCCCCccceeccceEeeeeccCCCCCCCCC
Confidence            67999999999999999998764221  112233568899999954 445567889999999999999999999996421


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKE  144 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~  144 (164)
                      .  ....           ..+....        ...+..++..+.+++.+||+.||++|||+.+
T Consensus       203 ~--~~~~-----------~~i~~~~--------~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~  245 (318)
T cd05582         203 R--KETM-----------TMILKAK--------LGMPQFLSPEAQSLLRALFKRNPANRLGAGP  245 (318)
T ss_pred             H--HHHH-----------HHHHcCC--------CCCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence            1  1000           0011000        0112334566889999999999999999544

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.81  E-value=7.1e-20  Score=128.10  Aligned_cols=145  Identities=21%  Similarity=0.228  Sum_probs=91.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCC-ccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQ-SMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |.||+++.++.++|+|||.+........ ........++..|++||.+......+.++|+||+|+++|++++|..||...
T Consensus       131 p~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~  210 (330)
T cd07834         131 PSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGR  210 (330)
T ss_pred             HHHEEEcCCCCEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCC
Confidence            6799999999999999999887532211 012234567889999965554436888999999999999999999999753


Q ss_pred             ccCchhHHHHHHHhhhhh------------hHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVS------------VMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ..... ... +.......            ..+.+..................+..+.+++.+||+.+|++|||+++++.
T Consensus       211 ~~~~~-~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~  288 (330)
T cd07834         211 DYIDQ-LNL-IVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALA  288 (330)
T ss_pred             CHHHH-HHH-HHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence            32111 110 00000000            01111100000000011111234667899999999999999999999987

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.81  E-value=1.3e-19  Score=125.28  Aligned_cols=144  Identities=25%  Similarity=0.248  Sum_probs=89.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||.+..+..... .......++..|++||.+.....++.++|+||+|++++++++|+.||....
T Consensus       144 p~nili~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~  222 (302)
T cd07864         144 CSNILLNNKGQIKLADFGLARLYNSEES-RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQ  222 (302)
T ss_pred             HHHEEECCCCcEEeCcccccccccCCcc-cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence            5799999999999999999876532221 111223457789999766544557789999999999999999999986421


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhccc-----------ccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLT-----------REDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                        .......+..................           ...........++..+.+++.+||+.+|++|||+++++.
T Consensus       223 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  298 (302)
T cd07864         223 --ELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN  298 (302)
T ss_pred             --hHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence              11111111111111111100000000           000001112234667899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.81  E-value=9.1e-20  Score=124.89  Aligned_cols=126  Identities=28%  Similarity=0.380  Sum_probs=85.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhcc---CcccCccchHhHHHHHHHHHhcCCCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGRE---GRVSTNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~---~~~~~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      |+||+++.++.+||+|||.++.+...   .......++..|++||.+...   ..++.++|+||+|+++|++++|..||.
T Consensus       132 p~nil~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~  208 (283)
T cd06617         132 PSNVLINRNGQVKLCDFGISGYLVDS---VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYD  208 (283)
T ss_pred             HHHEEECCCCCEEEeecccccccccc---cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCC
Confidence            68999999999999999998765221   112234577889999655321   336788999999999999999999986


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ..........            .......     . ......++..+.+++.+||..+|++||+++++++
T Consensus       209 ~~~~~~~~~~------------~~~~~~~-----~-~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~  260 (283)
T cd06617         209 SWKTPFQQLK------------QVVEEPS-----P-QLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ  260 (283)
T ss_pred             ccccCHHHHH------------HHHhcCC-----C-CCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            4221111111            1110000     0 0001124566899999999999999999999986

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.81  E-value=1.1e-20  Score=131.86  Aligned_cols=119  Identities=22%  Similarity=0.257  Sum_probs=82.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||+++....  .........|++.|+|||.+ ....++.++|+||+||++|+|++|..||....
T Consensus       124 p~NIll~~~~~~kl~Dfg~~~~~~~--~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  200 (321)
T cd05603         124 PENILLDSQGHVVLTDFGLCKEGVE--PEETTSTFCGTPEYLAPEVL-RKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD  200 (321)
T ss_pred             HHHeEECCCCCEEEccCCCCccCCC--CCCccccccCCcccCCHHHh-cCCCCCCcCcccccchhhhhhhcCCCCCCCCC
Confidence            6899999999999999999875311  11222345688999999554 45568889999999999999999999996421


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAK  143 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~  143 (164)
                      .  ...   .        ..+....        ...+...+..+.+++.+||+.||.+|+++.
T Consensus       201 ~--~~~---~--------~~i~~~~--------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (321)
T cd05603         201 V--SQM---Y--------DNILHKP--------LQLPGGKTVAACDLLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             H--HHH---H--------HHHhcCC--------CCCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence            1  000   0        0111110        111122344588999999999999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.81  E-value=2.9e-19  Score=122.57  Aligned_cols=142  Identities=21%  Similarity=0.257  Sum_probs=88.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.+..+...   .......++..|++||.. ....++.++|+||+|+++|+|++|..||....
T Consensus       135 ~~nili~~~~~~~l~dfg~~~~~~~~---~~~~~~~~~~~~~~PE~~-~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~  210 (287)
T cd07838         135 PQNILVTSDGQVKIADFGLARIYSFE---MALTSVVVTLWYRAPEVL-LQSSYATPVDMWSVGCIFAELFRRRPLFRGTS  210 (287)
T ss_pred             hhhEEEccCCCEEEeccCcceeccCC---cccccccccccccChHHh-ccCCCCCcchhhhHHHHHHHHHhCCCcccCCC
Confidence            68999999999999999998765221   112233467889999554 45567889999999999999999999886532


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhh-----hhcccc--cchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVD-----ANLLTR--EDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~--~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ... ...................     ......  ...........+..+.+++.+||+.||++||++++++.
T Consensus       211 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~  283 (287)
T cd07838         211 EAD-QLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ  283 (287)
T ss_pred             hHH-HHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence            211 1111111100000000000     000000  00111112345567889999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.81  E-value=6.6e-20  Score=124.65  Aligned_cols=126  Identities=20%  Similarity=0.230  Sum_probs=83.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCC-ccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQ-SMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+||+++.++.++|+|||+++.+..... ........++..|+|||.+ ....++.++|+||+||++|++++|..||...
T Consensus       134 p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~  212 (266)
T cd06651         134 GANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVI-SGEGYGRKADVWSLGCTVVEMLTEKPPWAEY  212 (266)
T ss_pred             HHHEEECCCCCEEEccCCCccccccccccCCccccCCccccccCHHHh-CCCCCCchhhhHHHHHHHHHHHHCCCCcccc
Confidence            6799999999999999999876521111 1111234577889999554 4566888999999999999999999998642


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ....                .......   .......+..+...+.+++ +||..+|++||++++++.
T Consensus       213 ~~~~----------------~~~~~~~---~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~  260 (266)
T cd06651         213 EAMA----------------AIFKIAT---QPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLR  260 (266)
T ss_pred             chHH----------------HHHHHhc---CCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence            1100                0000000   0001111233444566777 688899999999999975

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.81  E-value=6.7e-20  Score=125.74  Aligned_cols=137  Identities=19%  Similarity=0.313  Sum_probs=89.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||++..+...    ......++..|++||.+ ....++.++|+||+||++|++++|..||....
T Consensus       132 p~nil~~~~~~~~l~d~gl~~~~~~~----~~~~~~~~~~~~aPE~~-~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~  206 (284)
T cd06620         132 PSNILVNSRGQIKLCDFGVSGELINS----IADTFVGTSTYMSPERI-QGGKYTVKSDVWSLGISIIELALGKFPFAFSN  206 (284)
T ss_pred             HHHEEECCCCcEEEccCCcccchhhh----ccCccccCcccCCHHHH-ccCCCCccchHHHHHHHHHHHHhCCCCCcccc
Confidence            67999999999999999988654211    11234678899999544 45567889999999999999999999997533


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELS  150 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~  150 (164)
                      ......  .    ......+.+...... ..... ....++..+.+++.+||+.||++|||++++++..-
T Consensus       207 ~~~~~~--~----~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~  268 (284)
T cd06620         207 IDDDGQ--D----DPMGILDLLQQIVQE-PPPRL-PSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPP  268 (284)
T ss_pred             hhhhhh--h----hhhHHHHHHHHHhhc-cCCCC-CchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence            211100  0    000011111111100 00000 01124556889999999999999999999998643

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.81  E-value=7.9e-20  Score=125.52  Aligned_cols=126  Identities=21%  Similarity=0.265  Sum_probs=85.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||++.......   ......++..|++||.+ ....++.++|+||+|+++|++++|..||....
T Consensus       130 p~Nili~~~~~~kl~Dfg~~~~~~~~~---~~~~~~g~~~~~aPE~~-~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~  205 (285)
T cd05632         130 PENILLDDYGHIRISDLGLAVKIPEGE---SIRGRVGTVGYMAPEVL-NNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRK  205 (285)
T ss_pred             HHHEEECCCCCEEEecCCcceecCCCC---cccCCCCCcCccChHHh-cCCCCCcccchHHHHHHHHHHHhCCCCCCCCC
Confidence            579999999999999999987642111   12234688999999554 45568889999999999999999999997432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCC-----HHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRIN-----AKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~vl~  147 (164)
                      .... .....         ..+....       ...+..++..+.+++..||+.||++||+     +++++.
T Consensus       206 ~~~~-~~~~~---------~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05632         206 EKVK-REEVD---------RRVLETE-------EVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR  260 (285)
T ss_pred             HHHH-HHHHH---------Hhhhccc-------cccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence            1110 00000         0000000       0011233455789999999999999999     666665

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.81  E-value=2.3e-20  Score=127.39  Aligned_cols=130  Identities=19%  Similarity=0.203  Sum_probs=88.5

Q ss_pred             ceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccccCchhHHHH
Q 039452           10 MVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRW   89 (164)
Q Consensus        10 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~   89 (164)
                      ..++|.|||.|..-     +......+.|.-|+|| |++.+..|+.+.||||+||++.|+.+|...|....  ......+
T Consensus       249 ~~I~vIDFGsAtf~-----~e~hs~iVsTRHYRAP-EViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHe--n~EHLaM  320 (415)
T KOG0671|consen  249 TAIKVIDFGSATFD-----HEHHSTIVSTRHYRAP-EVILGLGWSQPCDVWSIGCILVELYTGETLFQTHE--NLEHLAM  320 (415)
T ss_pred             cceEEEecCCccee-----ccCcceeeeccccCCc-hheeccCcCCccCceeeeeEEEEeeccceecccCC--cHHHHHH
Confidence            45899999999763     2223556789999999 55557779999999999999999999999997533  2222244


Q ss_pred             HHHhhhhhhHHHhhhhcc---------------ccc--------c----hhhhhHHHHHHHHHHHHhhccccCccCCCCH
Q 039452           90 INDLLSVSVMEVVDANLL---------------TRE--------D----RHFAAKQQCVSFVFNLAMECTIESPERRINA  142 (164)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~---------------~~~--------~----~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  142 (164)
                      +...++..+..++.+...               ...        .    ............+.+|+.+||.+||.+|+|+
T Consensus       321 MerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl  400 (415)
T KOG0671|consen  321 MERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITL  400 (415)
T ss_pred             HHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccH
Confidence            555555444444443300               000        0    0011112344568999999999999999999


Q ss_pred             HHHHH
Q 039452          143 KEIVT  147 (164)
Q Consensus       143 ~~vl~  147 (164)
                      .|++.
T Consensus       401 ~EAL~  405 (415)
T KOG0671|consen  401 REALS  405 (415)
T ss_pred             HHHhc
Confidence            99876

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.81  E-value=7.9e-21  Score=132.73  Aligned_cols=120  Identities=28%  Similarity=0.296  Sum_probs=82.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||+++...  ..........|+..|+|||. .....++.++|+||+||++|+|++|..||....
T Consensus       124 p~NIll~~~~~~kL~DfG~~~~~~--~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~  200 (325)
T cd05604         124 PENILLDSQGHVVLTDFGLCKEGI--AQSDTTTTFCGTPEYLAPEV-IRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRD  200 (325)
T ss_pred             HHHeEECCCCCEEEeecCCcccCC--CCCCCcccccCChhhCCHHH-HcCCCCCCcCccccccceehhhhcCCCCCCCCC
Confidence            689999999999999999987531  11112234568899999954 455667889999999999999999999996421


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKE  144 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~  144 (164)
                      ...     ..        ........        ..+...+..+.+++.+||+.+|.+||++.+
T Consensus       201 ~~~-----~~--------~~~~~~~~--------~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~  243 (325)
T cd05604         201 VAE-----MY--------DNILHKPL--------VLRPGASLTAWSILEELLEKDRQRRLGAKE  243 (325)
T ss_pred             HHH-----HH--------HHHHcCCc--------cCCCCCCHHHHHHHHHHhccCHHhcCCCCC
Confidence            111     00        01111000        011123455789999999999999998753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.81  E-value=5.8e-20  Score=126.20  Aligned_cols=126  Identities=24%  Similarity=0.331  Sum_probs=86.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||++.......   ......|+..|+|||.+ ....++.++|+||+|+++|++++|..||....
T Consensus       130 p~Nil~~~~~~~~l~Dfg~~~~~~~~~---~~~~~~g~~~y~aPE~~-~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~  205 (285)
T cd05630         130 PENILLDDHGHIRISDLGLAVHVPEGQ---TIKGRVGTVGYMAPEVV-KNERYTFSPDWWALGCLLYEMIAGQSPFQQRK  205 (285)
T ss_pred             HHHEEECCCCCEEEeeccceeecCCCc---cccCCCCCccccChHHH-cCCCCCCccccHHHHHHHHHHHhCCCCCCCCC
Confidence            679999999999999999987642111   11234688999999554 45668889999999999999999999997432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCC-----HHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRIN-----AKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~vl~  147 (164)
                      .... ..         ..........       ...+..++..+.+++.+||+.||++|||     ++++++
T Consensus       206 ~~~~-~~---------~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~  260 (285)
T cd05630         206 KKIK-RE---------EVERLVKEVQ-------EEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE  260 (285)
T ss_pred             ccch-HH---------HHHhhhhhhh-------hhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence            1110 00         0001110000       0112234556889999999999999999     788876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.81  E-value=1.2e-19  Score=126.99  Aligned_cols=141  Identities=21%  Similarity=0.234  Sum_probs=89.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.+.....     ......++..|++||.+.....++.++|+||+|+++|++++|..||....
T Consensus       136 p~Nili~~~~~~~l~dfg~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~  210 (328)
T cd07856         136 PSNILINENCDLKICDFGLARIQDP-----QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKD  210 (328)
T ss_pred             HHHEeECCCCCEEeCccccccccCC-----CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            6799999999999999999875411     11233567789999655444567889999999999999999999986432


Q ss_pred             cCchhHHHHHHHhhhhhh------------HHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSV------------MEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTE  148 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  148 (164)
                      .  ......+........            .++................+.++..+.+++.+||+.+|++|||+++++..
T Consensus       211 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~  288 (328)
T cd07856         211 H--VNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH  288 (328)
T ss_pred             H--HHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            1  111111111111111            11111110000111111112345678999999999999999999998764

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.81  E-value=9.1e-20  Score=123.76  Aligned_cols=127  Identities=23%  Similarity=0.299  Sum_probs=86.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.+.......    .....++..|++|| ......++.++|+||+|++++++++|..||....
T Consensus       129 ~~ni~~~~~~~~~l~d~g~~~~~~~~~----~~~~~~~~~y~~PE-~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~  203 (265)
T cd06605         129 PSNILVNSRGQIKLCDFGVSGQLVNSL----AKTFVGTSSYMAPE-RIQGNDYSVKSDIWSLGLSLIELATGRFPYPPEN  203 (265)
T ss_pred             HHHEEECCCCCEEEeecccchhhHHHH----hhcccCChhccCHH-HHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccc
Confidence            579999999999999999986642111    11256778899995 4455678889999999999999999999986432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHH-HHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQ-QCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .......            +.........   ....+. .++..+.+++.+||..||++|||+.+++.
T Consensus       204 ~~~~~~~------------~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  256 (265)
T cd06605         204 DPPDGIF------------ELLQYIVNEP---PPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLE  256 (265)
T ss_pred             cccccHH------------HHHHHHhcCC---CCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence            1111111            1111111000   000111 15666899999999999999999999886

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.80  E-value=7.4e-20  Score=131.84  Aligned_cols=119  Identities=23%  Similarity=0.255  Sum_probs=88.2

Q ss_pred             CcceEe-cCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLL-DDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill-~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+|||+ +..++++|+|||.++.....     .....-|..|.|| ++.....++.+.|+||+|+++|+|++|+.||...
T Consensus       443 p~NIL~~~~~g~lrltyFG~a~~~~~~-----~~tp~~t~~y~AP-Evl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~  516 (612)
T KOG0603|consen  443 PGNILLDGSAGHLRLTYFGFWSELERS-----CDTPALTLQYVAP-EVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAH  516 (612)
T ss_pred             hhheeecCCCCcEEEEEechhhhCchh-----hcccchhhcccCh-hhhccCCCCcchhhHHHHHHHHHHHhCCCccccC
Confidence            789999 68999999999999875221     2233456789999 5555777999999999999999999999999753


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ..+ .               ++..........      ..++..+.+|+.+||+.||.+|++++++..
T Consensus       517 P~~-~---------------ei~~~i~~~~~s------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~  562 (612)
T KOG0603|consen  517 PAG-I---------------EIHTRIQMPKFS------ECVSDEAKDLLQQLLQVDPALRLGADEIGA  562 (612)
T ss_pred             Cch-H---------------HHHHhhcCCccc------cccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence            322 1               111111111100      455677999999999999999999998865

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.80  E-value=1.8e-19  Score=120.85  Aligned_cols=78  Identities=22%  Similarity=0.319  Sum_probs=64.5

Q ss_pred             CcceEecCC----ceEEEeccccceeccCCCCcc-ccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCC
Q 039452            1 PSNVLLDDN----MVAHLSDFGIAKLLIGEDQSM-TQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKP   75 (164)
Q Consensus         1 p~Nill~~~----~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p   75 (164)
                      |.|||+..+    |.|||+|+|++|.+.+..... .....+-|.+|+|||.++....++.+.|+|++||++.|+++..+.
T Consensus       160 PaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~Pl  239 (438)
T KOG0666|consen  160 PANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPL  239 (438)
T ss_pred             cceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCcc
Confidence            789999766    999999999999874433332 233456789999998888788899999999999999999999888


Q ss_pred             CCc
Q 039452           76 TDE   78 (164)
Q Consensus        76 ~~~   78 (164)
                      |.+
T Consensus       240 F~g  242 (438)
T KOG0666|consen  240 FKG  242 (438)
T ss_pred             ccc
Confidence            865

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.80  E-value=2.5e-19  Score=122.79  Aligned_cols=143  Identities=19%  Similarity=0.192  Sum_probs=89.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++++|||.++.+..  .........++..|++||.+.....++.++|+|++|+++|++++|..||....
T Consensus       128 p~ni~~~~~~~~~l~d~g~~~~~~~--~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~  205 (284)
T cd07836         128 PQNLLINKRGELKLADFGLARAFGI--PVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTN  205 (284)
T ss_pred             HHHEEECCCCcEEEeecchhhhhcC--CccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            6799999999999999999876421  11112234567889999666554557889999999999999999999987532


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhh----hc------ccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDA----NL------LTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~----~~------~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ... ....... ............    ..      ...........+.++..+.+++.+||+.||.+||+++++++
T Consensus       206 ~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  280 (284)
T cd07836         206 NED-QLLKIFR-IMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ  280 (284)
T ss_pred             cHH-HHHHHHH-HhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            211 1111111 000000000000    00      00000111112244667889999999999999999999875

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.80  E-value=7e-20  Score=129.99  Aligned_cols=130  Identities=21%  Similarity=0.281  Sum_probs=85.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhcc---CcccCccchHhHHHHHHHHHhcCCCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGRE---GRVSTNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~---~~~~~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      |+|||++.++.+||+|||++..+... .........|++.|+|||.+...   ..++.++|+||+||++|+|++|..||.
T Consensus       170 p~NILl~~~~~~kL~DFG~a~~~~~~-~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~  248 (370)
T cd05621         170 PDNMLLDKHGHLKLADFGTCMKMDET-GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFY  248 (370)
T ss_pred             HHHEEECCCCCEEEEecccceecccC-CceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCC
Confidence            68999999999999999999875221 11122345689999999766432   236789999999999999999999996


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccC--CCCHHHHHHH
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPER--RINAKEIVTE  148 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rps~~~vl~~  148 (164)
                      ......             ....+.+..    .....+....++..+.+++..||..++..  |+|++++++.
T Consensus       249 ~~~~~~-------------~~~~i~~~~----~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h  304 (370)
T cd05621         249 ADSLVG-------------TYSKIMDHK----NSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH  304 (370)
T ss_pred             CCCHHH-------------HHHHHHhCC----cccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence            431100             011111110    00011111233555788999999755543  8899998873

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.80  E-value=8.6e-20  Score=129.61  Aligned_cols=129  Identities=21%  Similarity=0.267  Sum_probs=85.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhcc---CcccCccchHhHHHHHHHHHhcCCCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGRE---GRVSTNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~---~~~~~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      |+|||++.++.+||+|||++..+... .........|++.|+|||.+...   ..++.++|+||+||++|+|++|..||.
T Consensus       170 p~NIll~~~~~ikL~DfG~a~~~~~~-~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~  248 (371)
T cd05622         170 PDNMLLDKSGHLKLADFGTCMKMNKE-GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY  248 (371)
T ss_pred             HHHEEECCCCCEEEEeCCceeEcCcC-CcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCC
Confidence            68999999999999999999875221 11122345689999999665432   236789999999999999999999996


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccC---CCCHHHHHHH
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPER---RINAKEIVTE  148 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~---Rps~~~vl~~  148 (164)
                      ......             ....+...    ......+....++..+.+++.+||. +|..   |++++++++.
T Consensus       249 ~~~~~~-------------~~~~i~~~----~~~~~~~~~~~~s~~~~~li~~~L~-~~~~r~~r~~~~ei~~h  304 (371)
T cd05622         249 ADSLVG-------------TYSKIMNH----KNSLTFPDDNDISKEAKNLICAFLT-DREVRLGRNGVEEIKRH  304 (371)
T ss_pred             CCCHHH-------------HHHHHHcC----CCcccCCCcCCCCHHHHHHHHHHcC-ChhhhcCCCCHHHHhcC
Confidence            421100             01111110    0011111122345668899999998 4444   6788888774

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.80  E-value=1.2e-19  Score=124.53  Aligned_cols=126  Identities=22%  Similarity=0.301  Sum_probs=86.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.+.......  .......++..|++||. .....++.++|+||+|+++|++++|..||....
T Consensus       144 p~ni~i~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~y~~PE~-~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~  220 (286)
T cd06614         144 SDNILLSKDGSVKLADFGFAAQLTKEK--SKRNSVVGTPYWMAPEV-IKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREP  220 (286)
T ss_pred             hhhEEEcCCCCEEECccchhhhhccch--hhhccccCCcccCCHhH-hcCCCCCCccccHHHHHHHHHHHhCCCCCCCCC
Confidence            689999999999999999876542211  11123346788999954 445567889999999999999999999986321


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .... ..            .....     ..........++..+.+++.+||+.+|.+|||+.++++
T Consensus       221 ~~~~-~~------------~~~~~-----~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~  269 (286)
T cd06614         221 PLRA-LF------------LITTK-----GIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ  269 (286)
T ss_pred             HHHH-HH------------HHHhc-----CCCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence            1110 00            00000     01111112234566889999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.80  E-value=4.6e-20  Score=124.92  Aligned_cols=121  Identities=25%  Similarity=0.298  Sum_probs=81.7

Q ss_pred             CcceEecCCce--------EEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhc
Q 039452            1 PSNVLLDDNMV--------AHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTR   72 (164)
Q Consensus         1 p~Nill~~~~~--------~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g   72 (164)
                      |+||+++.++.        ++++|||.+.....      .....++..|++||.+......+.++|+||+|+++|++++|
T Consensus       128 p~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g  201 (258)
T cd05078         128 AKNVLLIREEDRKTGNPPFIKLSDPGISITVLP------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSG  201 (258)
T ss_pred             cceEEEecccccccCCCceEEecccccccccCC------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcC
Confidence            68999976654        68999998765411      12245677899996665445578899999999999999998


Q ss_pred             C-CCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHH
Q 039452           73 K-KPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTEL  149 (164)
Q Consensus        73 ~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l  149 (164)
                      . .|+.......  ..            ......        ...+.....++.+++.+||+.||++|||++++++.|
T Consensus       202 ~~~~~~~~~~~~--~~------------~~~~~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l  257 (258)
T cd05078         202 GDKPLSALDSQK--KL------------QFYEDR--------HQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL  257 (258)
T ss_pred             CCCChhhccHHH--HH------------HHHHcc--------ccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence            5 5554211100  00            000000        011112234588999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.80  E-value=2.3e-19  Score=123.63  Aligned_cols=143  Identities=21%  Similarity=0.204  Sum_probs=87.4

Q ss_pred             CcceEecC-CceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDD-NMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+||+++. ++.+||+|||.+.....  .........++..|++||.+.....++.++|+||+|+++|++++|..||...
T Consensus       130 p~nill~~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~  207 (294)
T PLN00009        130 PQNLLIDRRTNALKLADFGLARAFGI--PVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGD  207 (294)
T ss_pred             cceEEEECCCCEEEEcccccccccCC--CccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            68999984 56799999999875421  1111223456788999976654455788999999999999999999998643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhh---------hccc-ccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDA---------NLLT-REDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~-~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .... ...... ...........+.         .... ............++.+.+++.+||..+|++||++.++++
T Consensus       208 ~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~  283 (294)
T PLN00009        208 SEID-ELFKIF-RILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE  283 (294)
T ss_pred             CHHH-HHHHHH-HHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence            2111 111100 0000000000000         0000 000000111234566889999999999999999999987

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.80  E-value=1.2e-19  Score=125.95  Aligned_cols=139  Identities=21%  Similarity=0.322  Sum_probs=88.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.+..+...    ......++..|++||. ..+..++.++|+||+|+++|++++|..||....
T Consensus       128 p~nil~~~~~~~~l~dfg~~~~~~~~----~~~~~~~~~~~~aPE~-~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~  202 (308)
T cd06615         128 PSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPER-LQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPD  202 (308)
T ss_pred             hHHEEEecCCcEEEccCCCccccccc----ccccCCCCcCccChhH-hcCCCCCccchHHHHHHHHHHHHhCCCCCCCcc
Confidence            67999999999999999998754211    1233467889999954 455567889999999999999999999986322


Q ss_pred             cCchhHHHHHHHhhhh---------------------hhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCC
Q 039452           81 SGEMTLKRWINDLLSV---------------------SVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERR  139 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  139 (164)
                        ..............                     ...+..+..... ... ......++.++.+++.+||+.+|++|
T Consensus       203 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~li~~~l~~~P~~R  278 (308)
T cd06615         203 --AKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNE-PPP-KLPSGAFSDEFQDFVDKCLKKNPKER  278 (308)
T ss_pred             --hhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcC-CCc-cCcCcccCHHHHHHHHHHccCChhhC
Confidence              11111111100000                     000001100000 000 00001245668999999999999999


Q ss_pred             CCHHHHHHH
Q 039452          140 INAKEIVTE  148 (164)
Q Consensus       140 ps~~~vl~~  148 (164)
                      ||++++++.
T Consensus       279 pt~~~ll~~  287 (308)
T cd06615         279 ADLKELTKH  287 (308)
T ss_pred             cCHHHHhcC
Confidence            999999875

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.80  E-value=1.7e-19  Score=122.78  Aligned_cols=127  Identities=24%  Similarity=0.365  Sum_probs=85.4

Q ss_pred             CcceEecC-CceEEEeccccceeccCCCCccccccccccccccCchhhhcc-CcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDD-NMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGRE-GRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+||+++. ++.++|+|||.+.......  .......++..|++||.+... ..++.++|+||+|+++|++++|..||..
T Consensus       136 p~nil~~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~  213 (268)
T cd06624         136 GDNVLVNTYSGVVKISDFGTSKRLAGIN--PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIE  213 (268)
T ss_pred             HHHEEEcCCCCeEEEecchhheecccCC--CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCcc
Confidence            68999976 6799999999987652211  122234578899999655332 2367899999999999999999999864


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .........               .....   ......+..+...+.+++.+||+.+|.+|||+.+++.
T Consensus       214 ~~~~~~~~~---------------~~~~~---~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  264 (268)
T cd06624         214 LGEPQAAMF---------------KVGMF---KIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ  264 (268)
T ss_pred             ccChhhhHh---------------hhhhh---ccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence            221110000               00000   0001122334566889999999999999999999876

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.80  E-value=4.8e-20  Score=141.39  Aligned_cols=124  Identities=18%  Similarity=0.228  Sum_probs=84.0

Q ss_pred             CcceEecC-----------------CceEEEeccccceeccCCCCccccccccccccccCchhhhc-cCcccCccchHhH
Q 039452            1 PSNVLLDD-----------------NMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGR-EGRVSTNGDVYSF   62 (164)
Q Consensus         1 p~Nill~~-----------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~~Di~s~   62 (164)
                      |+||||+.                 .+.+||+|||++..+..   ........+++.|+|||.+.. ...++.++|||||
T Consensus       153 PeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~---~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSL  229 (1021)
T PTZ00266        153 PQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGI---ESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWAL  229 (1021)
T ss_pred             HHHeEeecCccccccccccccccCCCCceEEccCCccccccc---cccccccCCCccccCHHHHhccCCCCCchhHHHHH
Confidence            67999954                 34589999999876521   112234568999999976643 3347889999999


Q ss_pred             HHHHHHHHhcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCH
Q 039452           63 GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINA  142 (164)
Q Consensus        63 g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  142 (164)
                      ||++|+|++|..||.....    ....+..         +...   . ..   .....+..+.+|+..||..+|.+|||+
T Consensus       230 G~ILYELLTGk~PF~~~~~----~~qli~~---------lk~~---p-~l---pi~~~S~eL~dLI~~~L~~dPeeRPSa  289 (1021)
T PTZ00266        230 GCIIYELCSGKTPFHKANN----FSQLISE---------LKRG---P-DL---PIKGKSKELNILIKNLLNLSAKERPSA  289 (1021)
T ss_pred             HHHHHHHHHCCCCCCcCCc----HHHHHHH---------HhcC---C-CC---CcCCCCHHHHHHHHHHhcCChhHCcCH
Confidence            9999999999999964211    1111100         0000   0 00   001224558899999999999999999


Q ss_pred             HHHHH
Q 039452          143 KEIVT  147 (164)
Q Consensus       143 ~~vl~  147 (164)
                      .+++.
T Consensus       290 ~QlL~  294 (1021)
T PTZ00266        290 LQCLG  294 (1021)
T ss_pred             HHHhc
Confidence            99984

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.80  E-value=1.1e-19  Score=125.21  Aligned_cols=126  Identities=20%  Similarity=0.267  Sum_probs=86.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.+.......  .......++..|++|| ......++.++|+||+|+++|++++|..||....
T Consensus       144 p~Nilv~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~~pE-~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~  220 (292)
T cd06657         144 SDSILLTHDGRVKLSDFGFCAQVSKEV--PRRKSLVGTPYWMAPE-LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP  220 (292)
T ss_pred             HHHEEECCCCCEEEcccccceeccccc--ccccccccCccccCHH-HhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            679999999999999999887653211  1122345788899995 4445567889999999999999999999986421


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .  ....            ..+.....    ........++..+.+++.+||+.+|.+||++.+++.
T Consensus       221 ~--~~~~------------~~~~~~~~----~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~  269 (292)
T cd06657         221 P--LKAM------------KMIRDNLP----PKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  269 (292)
T ss_pred             H--HHHH------------HHHHhhCC----cccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence            1  1000            00110000    001011223455788999999999999999999887

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.80  E-value=8.9e-19  Score=119.85  Aligned_cols=144  Identities=24%  Similarity=0.196  Sum_probs=88.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.++.......  ......++..|++||.+.....++.++|+||+|++++++++|..||....
T Consensus       126 ~~ni~~~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~  203 (282)
T cd07829         126 PQNILINRDGVLKLADFGLARAFGIPLR--TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDS  203 (282)
T ss_pred             hheEEEcCCCCEEEecCCcccccCCCcc--ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCcc
Confidence            6899999999999999999876522111  12233456789999766544467889999999999999999999886432


Q ss_pred             cCchhHHHHHHHhh---hhhhHHHhhhh----ccccc--chhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLL---SVSVMEVVDAN----LLTRE--DRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~---~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ... ..........   ........+..    .....  .......+..+..+.+++.+||..||++||++.+++.
T Consensus       204 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  278 (282)
T cd07829         204 EID-QLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK  278 (282)
T ss_pred             HHH-HHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence            111 1111110000   00000000000    00000  0000111223567899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.80  E-value=1e-19  Score=123.61  Aligned_cols=128  Identities=21%  Similarity=0.203  Sum_probs=86.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCC----ccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQ----SMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPT   76 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~   76 (164)
                      |+||+++.++.++|+|||.+........    ........++..|++||. .....++.++|+||+|++++++++|..||
T Consensus       130 p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~-~~~~~~~~~~Dv~slG~~~~~l~~g~~p~  208 (265)
T cd06631         130 GNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEV-INESGYGRKSDIWSIGCTVFEMATGKPPL  208 (265)
T ss_pred             HHhEEECCCCeEEeccchhhHhhhhccccccccccccccCCCccccChhh-hcCCCCcchhhHHHHHHHHHHHHhCCCcc
Confidence            6899999999999999999875421111    111123457889999954 44556788999999999999999999999


Q ss_pred             CccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           77 DEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ..........             .....     .......+..++..+.+++.+||+.+|++||++.+++.
T Consensus       209 ~~~~~~~~~~-------------~~~~~-----~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         209 ASMDRLAAMF-------------YIGAH-----RGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR  261 (265)
T ss_pred             ccCChHHHHH-------------Hhhhc-----cCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            6431111000             00000     00000112234556889999999999999999999875

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.80  E-value=1.3e-19  Score=124.99  Aligned_cols=128  Identities=23%  Similarity=0.360  Sum_probs=85.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhcc---CcccCccchHhHHHHHHHHHhcCCCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGRE---GRVSTNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~---~~~~~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      |+||+++.++.++|+|||.+..+....   ......++..|++||.+...   ..++.++|+||+|+++|++++|..||.
T Consensus       143 p~nill~~~~~~kL~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~  219 (296)
T cd06618         143 PSNILLDASGNVKLCDFGISGRLVDSK---AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYK  219 (296)
T ss_pred             HHHEEEcCCCCEEECccccchhccCCC---cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCC
Confidence            679999999999999999987652211   11223467789999655322   236788999999999999999999986


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHH
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTE  148 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  148 (164)
                      ........    .        ........     ........++..+.+++.+||+.||.+||++.+++..
T Consensus       220 ~~~~~~~~----~--------~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~  273 (296)
T cd06618         220 NCKTEFEV----L--------TKILQEEP-----PSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH  273 (296)
T ss_pred             cchhHHHH----H--------HHHhcCCC-----CCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            42111100    0        01111100     0000111245568999999999999999999999764

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.80  E-value=3.4e-19  Score=121.48  Aligned_cols=132  Identities=18%  Similarity=0.281  Sum_probs=87.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccC-cccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREG-RVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+||+++.++.++++|||.++...+...........++..|++||...... .++.++|+||+|++++++++|..||...
T Consensus       136 ~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~  215 (272)
T cd06629         136 ADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDE  215 (272)
T ss_pred             hhhEEEcCCCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCc
Confidence            679999999999999999987642211111122345778999996654433 3778999999999999999999998532


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ....    .         ..+......  ...........++..+.+++.+||..+|++|||++++++
T Consensus       216 ~~~~----~---------~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  268 (272)
T cd06629         216 EAIA----A---------MFKLGNKRS--APPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ  268 (272)
T ss_pred             chHH----H---------HHHhhcccc--CCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence            1110    0         000000000  000001111234566899999999999999999999876

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.80  E-value=8.3e-20  Score=125.00  Aligned_cols=125  Identities=22%  Similarity=0.300  Sum_probs=87.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.+..+....    .....++..|++||.+.....++.++|+||+|+++|++++|..||....
T Consensus       125 p~nili~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~  200 (278)
T cd05606         125 PANILLDEHGHVRISDLGLACDFSKKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK  200 (278)
T ss_pred             HHHEEECCCCCEEEccCcCccccCccC----CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCC
Confidence            679999999999999999987542211    1234688899999666545557889999999999999999999997532


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCC-----CHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRI-----NAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~vl~  147 (164)
                      .......               .....   ......+..++..+.+++.+||..+|++||     ++.++++
T Consensus       201 ~~~~~~~---------------~~~~~---~~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~  254 (278)
T cd05606         201 TKDKHEI---------------DRMTL---TMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  254 (278)
T ss_pred             ccchHHH---------------HHHhh---ccCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence            2111000               00000   001111223456689999999999999999     9999885

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.80  E-value=1.4e-19  Score=122.27  Aligned_cols=125  Identities=22%  Similarity=0.313  Sum_probs=86.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||.+.......   ......++..|++||.......++.++|+||+|+++|++++|..||....
T Consensus       130 ~~ni~~~~~~~~kl~d~~~~~~~~~~~---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~  206 (258)
T cd06632         130 GANILVDTNGVVKLADFGMAKQVVEFS---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLE  206 (258)
T ss_pred             HHHEEECCCCCEEEccCccceeccccc---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCc
Confidence            679999999999999999987652222   22334578889999665433337889999999999999999999986432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ....  .           .....      .......+..+...+.+++.+||+.+|.+||++++++.
T Consensus       207 ~~~~--~-----------~~~~~------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  254 (258)
T cd06632         207 GVAA--V-----------FKIGR------SKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE  254 (258)
T ss_pred             HHHH--H-----------HHHHh------cccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence            1000  0           00000      00001112334566889999999999999999999875

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.80  E-value=1.1e-19  Score=129.49  Aligned_cols=129  Identities=22%  Similarity=0.301  Sum_probs=82.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCC---------------------------------------------ccccccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQ---------------------------------------------SMTQTQT   35 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~---------------------------------------------~~~~~~~   35 (164)
                      |+|||++.++.+||+|||++..+.....                                             .......
T Consensus       129 p~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (381)
T cd05626         129 PDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSL  208 (381)
T ss_pred             HHHEEECCCCCEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccc
Confidence            6899999999999999998754310000                                             0001124


Q ss_pred             cccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhh
Q 039452           36 LATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA  115 (164)
Q Consensus        36 ~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (164)
                      .||..|+|||.+ ....++.++||||+||++|+|++|..||..........             .+...    ......+
T Consensus       209 ~gt~~Y~aPE~~-~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~-------------~i~~~----~~~~~~~  270 (381)
T cd05626         209 VGTPNYIAPEVL-LRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQL-------------KVINW----ENTLHIP  270 (381)
T ss_pred             cCCccccCHHHH-cCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHH-------------HHHcc----ccccCCC
Confidence            689999999554 45567889999999999999999999996432111100             01100    0000111


Q ss_pred             hHHHHHHHHHHHHhh--ccccCccCCCCHHHHHH
Q 039452          116 AKQQCVSFVFNLAME--CTIESPERRINAKEIVT  147 (164)
Q Consensus       116 ~~~~~~~~~~~l~~~--cl~~~p~~Rps~~~vl~  147 (164)
                      ....+++++.+++.+  |+..++..|+++++++.
T Consensus       271 ~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~  304 (381)
T cd05626         271 PQVKLSPEAVDLITKLCCSAEERLGRNGADDIKA  304 (381)
T ss_pred             CCCCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence            112345567888887  55566667999999986

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.80  E-value=1.2e-19  Score=122.98  Aligned_cols=125  Identities=19%  Similarity=0.278  Sum_probs=84.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.+.....      .....++..|++||... ....+.++|+||+|+++|++++|..||....
T Consensus       125 p~nil~~~~~~~~l~dfg~~~~~~~------~~~~~~~~~y~~pe~~~-~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~  197 (260)
T cd05611         125 PENLLIDQTGHLKLTDFGLSRNGLE------NKKFVGTPDYLAPETIL-GVGDDKMSDWWSLGCVIFEFLFGYPPFHAET  197 (260)
T ss_pred             HHHeEECCCCcEEEeecccceeccc------cccCCCCcCccChhhhc-CCCCcchhhhHHHHHHHHHHHHCCCCCCCCC
Confidence            6799999999999999998875421      12335778899996544 4447889999999999999999999996432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTEL  149 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l  149 (164)
                      ....     ..        .... .   ...........++..+.+++.+||+.+|++|||+..+.+.|
T Consensus       198 ~~~~-----~~--------~~~~-~---~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l  249 (260)
T cd05611         198 PDAV-----FD--------NILS-R---RINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIK  249 (260)
T ss_pred             HHHH-----HH--------HHHh-c---ccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence            1110     00        0000 0   00001111224566689999999999999999876555543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.79  E-value=4.9e-19  Score=115.77  Aligned_cols=145  Identities=18%  Similarity=0.215  Sum_probs=92.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCC--ccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQ--SMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      ++|+||+.+|.+||+|||+++.++....  ....+..+-|.+|++||.++....++++.|+|..||++.+|.++.+.+.+
T Consensus       152 aaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqg  231 (376)
T KOG0669|consen  152 AANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQG  231 (376)
T ss_pred             HhhEEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccC
Confidence            5799999999999999999987742111  12234455688999998888888899999999999999999999998864


Q ss_pred             cccCchhHHHHHHHhhh----hhhHH-----Hhhhhccc---ccchh----hhhHHHHHHHHHHHHhhccccCccCCCCH
Q 039452           79 MFSGEMTLKRWINDLLS----VSVME-----VVDANLLT---REDRH----FAAKQQCVSFVFNLAMECTIESPERRINA  142 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~----~~~~~-----~~~~~~~~---~~~~~----~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  142 (164)
                      .  .+.+....+...-+    +.+++     +.......   ....+    ...+---.++..+++.+++..||.+|+++
T Consensus       232 n--teqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~a  309 (376)
T KOG0669|consen  232 N--TEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDA  309 (376)
T ss_pred             C--hHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcch
Confidence            2  22222222221111    11111     11111000   00000    00000112357899999999999999998


Q ss_pred             HHHHH
Q 039452          143 KEIVT  147 (164)
Q Consensus       143 ~~vl~  147 (164)
                      ++++.
T Consensus       310 d~aln  314 (376)
T KOG0669|consen  310 DQALN  314 (376)
T ss_pred             Hhhhc
Confidence            87764

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.79  E-value=2.1e-19  Score=124.71  Aligned_cols=123  Identities=23%  Similarity=0.324  Sum_probs=85.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhh--ccCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYG--REGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~--~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+||+++.++.++|+|||.+.....      .....++..|++||.+.  .....+.++|+||+|+++|++++|..||..
T Consensus       143 p~nil~~~~~~~kl~dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~  216 (308)
T cd06634         143 AGNILLSEPGLVKLGDFGSASIMAP------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN  216 (308)
T ss_pred             HHhEEECCCCcEEECCcccceeecC------cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCcc
Confidence            6899999999999999999876421      12345778899996653  234467889999999999999999999854


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTE  148 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  148 (164)
                      .......             .......      .........+..+.+++.+||..+|++||++.+++..
T Consensus       217 ~~~~~~~-------------~~~~~~~------~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~  267 (308)
T cd06634         217 MNAMSAL-------------YHIAQNE------SPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  267 (308)
T ss_pred             ccHHHHH-------------HHHhhcC------CCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence            2111100             0000000      0011112344558899999999999999999988864

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.79  E-value=9.1e-20  Score=129.18  Aligned_cols=128  Identities=23%  Similarity=0.290  Sum_probs=84.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCcc------------------------------------ccccccccccccCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSM------------------------------------TQTQTLATIGYMAP   44 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~------------------------------------~~~~~~~~~~~~~p   44 (164)
                      |+|||++.++.++|+|||++..+.......                                    ......||+.|+||
T Consensus       129 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  208 (364)
T cd05599         129 PDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAP  208 (364)
T ss_pred             HHHeEECCCCCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCH
Confidence            689999999999999999987542111000                                    00123589999999


Q ss_pred             hhhhccCcccCccchHhHHHHHHHHHhcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHH
Q 039452           45 VEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFV  124 (164)
Q Consensus        45 e~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (164)
                      |. .....++.++|+||+||++|+|++|..||.......  .           ...+....    .....+....+++.+
T Consensus       209 E~-~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~--~-----------~~~i~~~~----~~~~~~~~~~~s~~~  270 (364)
T cd05599         209 EV-FLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQE--T-----------YRKIINWK----ETLQFPDEVPLSPEA  270 (364)
T ss_pred             HH-HcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHHH--H-----------HHHHHcCC----CccCCCCCCCCCHHH
Confidence            54 445668899999999999999999999996432111  0           00111000    000001111345568


Q ss_pred             HHHHhhccccCccCCCC---HHHHHH
Q 039452          125 FNLAMECTIESPERRIN---AKEIVT  147 (164)
Q Consensus       125 ~~l~~~cl~~~p~~Rps---~~~vl~  147 (164)
                      .+++.+|+. +|.+|++   +++++.
T Consensus       271 ~~li~~ll~-~p~~R~~~~~~~~ll~  295 (364)
T cd05599         271 KDLIKRLCC-EAERRLGNNGVNEIKS  295 (364)
T ss_pred             HHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence            899999996 9999998   888876

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.79  E-value=2.1e-19  Score=120.80  Aligned_cols=125  Identities=21%  Similarity=0.322  Sum_probs=86.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.+........   .....++..|++||. ......+.++|+||+|++++++++|..||....
T Consensus       126 p~ni~i~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~~PE~-~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~  201 (253)
T cd05122         126 AANILLTSDGEVKLIDFGLSAQLSDTKA---RNTMVGTPYWMAPEV-INGKPYDYKADIWSLGITAIELAEGKPPYSELP  201 (253)
T ss_pred             HHHEEEccCCeEEEeecccccccccccc---ccceecCCcccCHHH-HcCCCCCccccHHHHHHHHHHHHhCCCCCCCCc
Confidence            6799999999999999999876522111   233457788999954 445557889999999999999999999986432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ......             .... .    ..........++..+.+++.+||+.||++|||+.++++
T Consensus       202 ~~~~~~-------------~~~~-~----~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~  250 (253)
T cd05122         202 PMKALF-------------KIAT-N----GPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK  250 (253)
T ss_pred             hHHHHH-------------HHHh-c----CCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            111000             0000 0    00001111123455889999999999999999999875

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.79  E-value=1.8e-19  Score=123.21  Aligned_cols=125  Identities=22%  Similarity=0.328  Sum_probs=87.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++++|||++..+...  ........++..|++|| ......++.++|+||+|+++|++++|..||....
T Consensus       129 p~Ni~i~~~~~~~l~dfg~~~~~~~~--~~~~~~~~~~~~y~~PE-~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~  205 (277)
T cd06641         129 AANVLLSEHGEVKLADFGVAGQLTDT--QIKRNTFVGTPFWMAPE-VIKQSAYDSKADIWSLGITAIELAKGEPPHSELH  205 (277)
T ss_pred             HHhEEECCCCCEEEeecccceecccc--hhhhccccCCccccChh-hhccCCCCchhhHHHHHHHHHHHHcCCCCCCccc
Confidence            67999999999999999998765221  11222345778899995 4445567788999999999999999999986422


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTE  148 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  148 (164)
                      ....  .            ..+....      .......++..+.+++.+||+.+|++||++++++..
T Consensus       206 ~~~~--~------------~~~~~~~------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~  253 (277)
T cd06641         206 PMKV--L------------FLIPKNN------PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH  253 (277)
T ss_pred             hHHH--H------------HHHhcCC------CCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            1110  0            0000000      001122345568899999999999999999999983

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.79  E-value=3e-19  Score=125.22  Aligned_cols=145  Identities=19%  Similarity=0.180  Sum_probs=88.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCC------------CccccccccccccccCchhhhccCcccCccchHhHHHHHHH
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGED------------QSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLME   68 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~------------~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~   68 (164)
                      |+||+++.++.++|+|||.+..+....            .........++..|++||.+.....++.++|+||+|+++|+
T Consensus       147 ~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~e  226 (335)
T PTZ00024        147 PANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAE  226 (335)
T ss_pred             HHHeEECCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHH
Confidence            579999999999999999987653100            01111223457789999766544557889999999999999


Q ss_pred             HHhcCCCCCccccCchhHHHHHHHhhhhhhHH----Hhhhh-----cccccchhhhhHHHHHHHHHHHHhhccccCccCC
Q 039452           69 AFTRKKPTDEMFSGEMTLKRWINDLLSVSVME----VVDAN-----LLTREDRHFAAKQQCVSFVFNLAMECTIESPERR  139 (164)
Q Consensus        69 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  139 (164)
                      +++|..||.......  ....+..........    .....     ...............+..+.+++.+||+.+|++|
T Consensus       227 l~tg~~p~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R  304 (335)
T PTZ00024        227 LLTGKPLFPGENEID--QLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLER  304 (335)
T ss_pred             HHhCCCCCCCCCHHH--HHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhc
Confidence            999999986432211  111111111000000    00000     0000001111122345668899999999999999


Q ss_pred             CCHHHHHH
Q 039452          140 INAKEIVT  147 (164)
Q Consensus       140 ps~~~vl~  147 (164)
                      ||+++++.
T Consensus       305 ~s~~~~l~  312 (335)
T PTZ00024        305 ISAKEALK  312 (335)
T ss_pred             cCHHHHhc
Confidence            99999986

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.79  E-value=1.7e-19  Score=124.95  Aligned_cols=131  Identities=18%  Similarity=0.167  Sum_probs=83.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCC-------------ccccccccccccccCchhhhccCcccCccchHhHHHHHH
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQ-------------SMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLM   67 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~   67 (164)
                      |+||+++.++.++++|||.++.......             ........++..|++||.+ ....++.++|+||+|+++|
T Consensus       129 p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~vl~  207 (305)
T cd05609         129 PDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVI-LRQGYGKPVDWWAMGIILY  207 (305)
T ss_pred             hHHEEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhc-cCCCCCchhhHHHHHHHHH
Confidence            6899999999999999998864210000             0011123467789999654 4456788999999999999


Q ss_pred             HHHhcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           68 EAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        68 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ++++|..||.......                 .............. ....++..+.+++.+||+.+|++||++..+.+
T Consensus       208 el~~g~~pf~~~~~~~-----------------~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~  269 (305)
T cd05609         208 EFLVGCVPFFGDTPEE-----------------LFGQVISDDIEWPE-GDEALPADAQDLISRLLRQNPLERLGTGGAFE  269 (305)
T ss_pred             HHHhCCCCCCCCCHHH-----------------HHHHHHhcccCCCC-ccccCCHHHHHHHHHHhccChhhccCccCHHH
Confidence            9999999986421111                 00000000000000 11134556889999999999999998655555


Q ss_pred             HHH
Q 039452          148 ELS  150 (164)
Q Consensus       148 ~l~  150 (164)
                      .|.
T Consensus       270 ll~  272 (305)
T cd05609         270 VKQ  272 (305)
T ss_pred             HHh
Confidence            443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.79  E-value=2.3e-19  Score=125.43  Aligned_cols=142  Identities=18%  Similarity=0.303  Sum_probs=86.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCcc-----ccccccccccccCchhhhcc-CcccCccchHhHHHHHHHHHhcCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSM-----TQTQTLATIGYMAPVEYGRE-GRVSTNGDVYSFGIMLMEAFTRKK   74 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~-----~~~~~~~~~~~~~pe~~~~~-~~~~~~~Di~s~g~~~~~~~~g~~   74 (164)
                      |+|||++.++.++++||+............     ......++..|++||.+... ..++.++|+||+||++|++++|..
T Consensus       129 p~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~  208 (327)
T cd08227         129 ASHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHV  208 (327)
T ss_pred             hhhEEEecCCcEEEcccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCC
Confidence            689999999999999998654432111100     01123456779999666543 357889999999999999999999


Q ss_pred             CCCccccCchhHHHHHHHhhhhhhHHHhhhh-------------------c----c-------cccchhhhhHHHHHHHH
Q 039452           75 PTDEMFSGEMTLKRWINDLLSVSVMEVVDAN-------------------L----L-------TREDRHFAAKQQCVSFV  124 (164)
Q Consensus        75 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~----~-------~~~~~~~~~~~~~~~~~  124 (164)
                      ||............ ..    .......+..                   .    .       ............+++.+
T Consensus       209 pf~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (327)
T cd08227         209 PFKDMPATQMLLEK-LN----GTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHF  283 (327)
T ss_pred             CCCCcchhHHHHHH-hc----CCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHH
Confidence            99753221111110 00    0000000000                   0    0       00000011122345678


Q ss_pred             HHHHhhccccCccCCCCHHHHHH
Q 039452          125 FNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus       125 ~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .+++.+||+.||++|||++++++
T Consensus       284 ~~li~~~l~~dP~~Rpt~~ell~  306 (327)
T cd08227         284 HHFVEQCLQRNPDARPSASTLLN  306 (327)
T ss_pred             HHHHHHHHhhCchhcCCHHHHhc
Confidence            99999999999999999999986

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.79  E-value=4.4e-19  Score=124.90  Aligned_cols=141  Identities=19%  Similarity=0.197  Sum_probs=88.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||+++....     ......++..|++||.+.....++.++|+||+|+++|++++|..||....
T Consensus       148 p~NIll~~~~~~kl~dfg~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~  222 (345)
T cd07877         148 PSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD  222 (345)
T ss_pred             hHHEEEcCCCCEEEecccccccccc-----cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999875411     11234577889999665544557889999999999999999999986422


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhc-----------ccccchhh-hhHHHHHHHHHHHHhhccccCccCCCCHHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANL-----------LTREDRHF-AAKQQCVSFVFNLAMECTIESPERRINAKEIVTE  148 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~-~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  148 (164)
                      .. ........ ..............           ........ ......+..+.+++.+||+.||.+|||+.+++..
T Consensus       223 ~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h  300 (345)
T cd07877         223 HI-DQLKLILR-LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  300 (345)
T ss_pred             HH-HHHHHHHH-HhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence            11 11111111 00000001110000           00000000 0011235568899999999999999999998864

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.79  E-value=6.9e-19  Score=120.95  Aligned_cols=133  Identities=21%  Similarity=0.271  Sum_probs=86.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||++......    ......++..|++|| ......++.++|+||+|+++|++++|..||....
T Consensus       133 ~~nil~~~~~~~~l~dfg~~~~~~~~----~~~~~~~~~~y~~pE-~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~  207 (287)
T cd06621         133 PSNILLTRKGQVKLCDFGVSGELVNS----LAGTFTGTSFYMAPE-RIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEG  207 (287)
T ss_pred             HHHEEEecCCeEEEeecccccccccc----ccccccCCccccCHH-HhcCCCCCchhhHHHHHHHHHHHHhCCCCCCccc
Confidence            57999999999999999998654211    112334677899995 4455667889999999999999999999987542


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ....................+         ..........+..+.+++.+||+.+|++|||+.++++
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~  265 (287)
T cd06621         208 EPPLGPIELLSYIVNMPNPEL---------KDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE  265 (287)
T ss_pred             CCCCChHHHHHHHhcCCchhh---------ccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence            211111111110000000000         0000000123456889999999999999999999987

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.79  E-value=1.8e-19  Score=124.26  Aligned_cols=127  Identities=20%  Similarity=0.271  Sum_probs=87.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.+..+....  .......++..|++||.+ ....++.++|+||+|+++|++++|..||....
T Consensus       143 p~Nili~~~~~~kL~dfg~~~~~~~~~--~~~~~~~~~~~y~~PE~~-~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~  219 (293)
T cd06647         143 SDNILLGMDGSVKLTDFGFCAQITPEQ--SKRSTMVGTPYWMAPEVV-TRKAYGPKVDIWSLGIMAIEMVEGEPPYLNEN  219 (293)
T ss_pred             HHHEEEcCCCCEEEccCcceecccccc--cccccccCChhhcCchhh-ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            579999999999999999887652211  112234577889999544 44567889999999999999999999996432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTE  148 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  148 (164)
                      ......             ..     ..........+...+..+.+++.+||..+|.+||++.+++..
T Consensus       220 ~~~~~~-------------~~-----~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h  269 (293)
T cd06647         220 PLRALY-------------LI-----ATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH  269 (293)
T ss_pred             hhhhee-------------eh-----hcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            111000             00     000111111223345568899999999999999999999863

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.79  E-value=3.7e-19  Score=135.92  Aligned_cols=136  Identities=21%  Similarity=0.285  Sum_probs=91.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCC----------------ccccccccccccccCchhhhccCcccCccchHhHHH
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQ----------------SMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGI   64 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~----------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~   64 (164)
                      |+||+++.++.++|+|||+++.......                ........|++.|+|||. ..+...+.++|+||+||
T Consensus       141 PeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~-l~g~~~S~kSDIWSLGV  219 (932)
T PRK13184        141 PDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPER-LLGVPASESTDIYALGV  219 (932)
T ss_pred             hheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHH-hcCCCCCcHhHHHHHHH
Confidence            7899999999999999999976511100                001122468999999954 45566788999999999


Q ss_pred             HHHHHHhcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCC-CHH
Q 039452           65 MLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRI-NAK  143 (164)
Q Consensus        65 ~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-s~~  143 (164)
                      ++|+|++|..||...........            .    ..  ...........+++.+.+++.+||+.||++|+ +++
T Consensus       220 ILyELLTG~~PF~~~~~~ki~~~------------~----~i--~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~e  281 (932)
T PRK13184        220 ILYQMLTLSFPYRRKKGRKISYR------------D----VI--LSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQ  281 (932)
T ss_pred             HHHHHHHCCCCCCCcchhhhhhh------------h----hc--cChhhccccccCCHHHHHHHHHHccCChhhCcCHHH
Confidence            99999999999964211110000            0    00  00000011123455688999999999999997 577


Q ss_pred             HHHHHHHHHHHH
Q 039452          144 EIVTELSKIRDS  155 (164)
Q Consensus       144 ~vl~~l~~~~~~  155 (164)
                      ++.+.|+...+.
T Consensus       282 eLl~~Le~~lq~  293 (932)
T PRK13184        282 ELKQDLEPHLQG  293 (932)
T ss_pred             HHHHHHHHHHhc
Confidence            788877776543

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.79  E-value=2.3e-19  Score=121.61  Aligned_cols=128  Identities=22%  Similarity=0.307  Sum_probs=88.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.+..+..  .........++..|++|| ......++.++|+||+|+++|++++|..||....
T Consensus       128 ~~ni~~~~~~~~~l~df~~~~~~~~--~~~~~~~~~~~~~y~~pE-~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~  204 (264)
T cd06623         128 PSNLLINSKGEVKIADFGISKVLEN--TLDQCNTFVGTVTYMSPE-RIQGESYSYAADIWSLGLTLLECALGKFPFLPPG  204 (264)
T ss_pred             HHHEEECCCCCEEEccCccceeccc--CCCcccceeecccccCHh-hhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc
Confidence            6799999999999999999876522  111122345778899995 4455567889999999999999999999986543


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHH-HHHHHHHHHhhccccCccCCCCHHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQ-CVSFVFNLAMECTIESPERRINAKEIVTE  148 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  148 (164)
                      ...  ....        ...+.....       ...+.. ++..+.+++.+||+.+|++|||+.++++.
T Consensus       205 ~~~--~~~~--------~~~~~~~~~-------~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~  256 (264)
T cd06623         205 QPS--FFEL--------MQAICDGPP-------PSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH  256 (264)
T ss_pred             ccC--HHHH--------HHHHhcCCC-------CCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence            211  0000        001111000       011112 45668999999999999999999999873

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.79  E-value=1.4e-19  Score=117.00  Aligned_cols=122  Identities=18%  Similarity=0.255  Sum_probs=93.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|+|++..+.+|++|||.+..-    .........||..|++| +...+..++..+|+|++|++.|+++.|.+||+...
T Consensus       152 penlLlg~~~~lkiAdfGwsV~~----p~~kR~tlcgt~dyl~p-Emv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~  226 (281)
T KOG0580|consen  152 PENLLLGSAGELKIADFGWSVHA----PSNKRKTLCGTLDYLPP-EMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS  226 (281)
T ss_pred             HHHhccCCCCCeeccCCCceeec----CCCCceeeecccccCCH-hhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh
Confidence            78999999999999999998763    23344567899999999 66667778899999999999999999999998543


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTE  148 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  148 (164)
                      .++.             ...+.. .       ....|..++..+.+++..|+..+|.+|.+..++++.
T Consensus       227 ~~et-------------YkrI~k-~-------~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h  273 (281)
T KOG0580|consen  227 HSET-------------YKRIRK-V-------DLKFPSTISGGAADLISRLLVKNPIERLALTEVMDH  273 (281)
T ss_pred             hHHH-------------HHHHHH-c-------cccCCcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence            1111             111111 1       111235667779999999999999999999988763

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.79  E-value=3.6e-19  Score=123.98  Aligned_cols=124  Identities=23%  Similarity=0.333  Sum_probs=86.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhh--ccCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYG--REGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~--~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+||+++.++.++|+|||.+.....      .....++..|++||.+.  ....++.++|+||+|+++|++++|..||..
T Consensus       153 p~Nil~~~~~~~kl~dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~  226 (317)
T cd06635         153 AGNILLTEPGQVKLADFGSASIASP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN  226 (317)
T ss_pred             cccEEECCCCCEEEecCCCccccCC------cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence            6899999999999999998765311      12345778899996653  234578899999999999999999999864


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTEL  149 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l  149 (164)
                      ......             .........      .......++..+.+++.+||+.+|.+||++.++++.+
T Consensus       227 ~~~~~~-------------~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~  278 (317)
T cd06635         227 MNAMSA-------------LYHIAQNES------PTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHM  278 (317)
T ss_pred             ccHHHH-------------HHHHHhccC------CCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence            311110             001111000      0001123445588999999999999999999998753

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.79  E-value=1.3e-18  Score=136.62  Aligned_cols=145  Identities=26%  Similarity=0.449  Sum_probs=95.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+++. +|......      ......++..|+||| +.....++.++|||||||++||+++|+.||....
T Consensus       811 p~Nil~~~~~~~~~~-~~~~~~~~------~~~~~~~t~~y~aPE-~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~  882 (968)
T PLN00113        811 PEKIIIDGKDEPHLR-LSLPGLLC------TDTKCFISSAYVAPE-TRETKDITEKSDIYGFGLILIELLTGKSPADAEF  882 (968)
T ss_pred             HHhEEECCCCceEEE-eccccccc------cCCCccccccccCcc-cccCCCCCcccchhhHHHHHHHHHhCCCCCCccc
Confidence            679999988877775 55443321      112235788999995 4456668899999999999999999999986543


Q ss_pred             cCchhHHHHHHHhhhh-hhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhh
Q 039452           81 SGEMTLKRWINDLLSV-SVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLF  157 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~  157 (164)
                      ........|....... .....++.....    ..........++.+++.+||+.||++|||++++++.|+.+.+.-.
T Consensus       883 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~~  956 (968)
T PLN00113        883 GVHGSIVEWARYCYSDCHLDMWIDPSIRG----DVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSSS  956 (968)
T ss_pred             CCCCcHHHHHHHhcCccchhheeCccccC----CCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcccc
Confidence            3333344443322211 111222222111    111122334567899999999999999999999999999876443

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.79  E-value=3.1e-19  Score=121.97  Aligned_cols=121  Identities=22%  Similarity=0.315  Sum_probs=82.3

Q ss_pred             CcceEecCCc-------eEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHH-hc
Q 039452            1 PSNVLLDDNM-------VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAF-TR   72 (164)
Q Consensus         1 p~Nill~~~~-------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~-~g   72 (164)
                      |+||+++..+       .++++|||.+.....      .....++..|++||.+.....++.++|+||||+++|+++ +|
T Consensus       145 p~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~------~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g  218 (274)
T cd05076         145 AKNILLARLGLAEGTSPFIKLSDPGVSFTALS------REERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDG  218 (274)
T ss_pred             cccEEEeccCcccCccceeeecCCcccccccc------ccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence            6899997543       479999998754311      122346778999966655556788999999999999985 68


Q ss_pred             CCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHH
Q 039452           73 KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTEL  149 (164)
Q Consensus        73 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l  149 (164)
                      ..||........  .            ........        .+......+.+++.+||+.+|++|||+.++++.|
T Consensus       219 ~~p~~~~~~~~~--~------------~~~~~~~~--------~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L  273 (274)
T cd05076         219 EVPLKERTPSEK--E------------RFYEKKHR--------LPEPSCKELATLISQCLTYEPTQRPSFRTILRDL  273 (274)
T ss_pred             CCCccccChHHH--H------------HHHHhccC--------CCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence            888864322110  0            01111000        0111223588999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.79  E-value=4.6e-19  Score=126.07  Aligned_cols=123  Identities=20%  Similarity=0.358  Sum_probs=93.6

Q ss_pred             CcceEe-cCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLL-DDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill-~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+||.+ .+-|-+||.|||++-.+..+.   ..+...|+..|-|||.++...+..+++||||+|+++|.+.-|+.||...
T Consensus       146 PENVVFFEKlGlVKLTDFGFSNkf~PG~---kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeA  222 (864)
T KOG4717|consen  146 PENVVFFEKLGLVKLTDFGFSNKFQPGK---KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEA  222 (864)
T ss_pred             cceeEEeeecCceEeeeccccccCCCcc---hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccc
Confidence            678766 578999999999987663222   3456679999999977777777778999999999999999999999754


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ...+.             +.-+++..        ...|..++.++++|+..||..||.+|.|.+++..
T Consensus       223 NDSET-------------LTmImDCK--------YtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s  269 (864)
T KOG4717|consen  223 NDSET-------------LTMIMDCK--------YTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS  269 (864)
T ss_pred             cchhh-------------hhhhhccc--------ccCchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence            32221             11122211        1245667788999999999999999999998864

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.78  E-value=4.2e-19  Score=119.88  Aligned_cols=123  Identities=20%  Similarity=0.346  Sum_probs=84.3

Q ss_pred             CcceEecC-CceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDD-NMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+||+++. ++.++++|||.+.......   ......++..|++||. ......+.++|+||+|+++|++++|..||...
T Consensus       129 ~~nil~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~y~aPE~-~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~  204 (256)
T cd08220         129 TQNILLDKHKMVVKIGDFGISKILSSKS---KAYTVVGTPCYISPEL-CEGKPYNQKSDIWALGCVLYELASLKRAFEAA  204 (256)
T ss_pred             HHHEEEcCCCCEEEEccCCCceecCCCc---cccccccCCcccCchh-ccCCCCCcccchHHHHHHHHHHHhCCCCcccC
Confidence            57999975 4568999999987652211   1223457889999954 44555778999999999999999999998642


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ....  ..           ........       ...+..++..+.+++.+||+.+|++|||+.+++.
T Consensus       205 ~~~~--~~-----------~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~  252 (256)
T cd08220         205 NLPA--LV-----------LKIMSGTF-------APISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA  252 (256)
T ss_pred             chHH--HH-----------HHHHhcCC-------CCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence            1110  00           00000000       0112234556889999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.78  E-value=7.4e-19  Score=123.68  Aligned_cols=140  Identities=19%  Similarity=0.186  Sum_probs=88.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++++|||.+.....     ......++..|++||.+.....++.++|+||+|++++++++|..||....
T Consensus       146 p~Nill~~~~~~kl~dfg~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~  220 (343)
T cd07880         146 PGNLAVNEDCELKILDFGLARQTDS-----EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHD  220 (343)
T ss_pred             HHHEEEcCCCCEEEeeccccccccc-----CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999876421     11233567889999666544457788999999999999999999986432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhc-----------cc-ccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANL-----------LT-REDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~-~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ... ........ ......++.....           .. ...........++..+.+++.+|++.||.+|||+.+++.
T Consensus       221 ~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~  297 (343)
T cd07880         221 HLD-QLMEIMKV-TGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA  297 (343)
T ss_pred             HHH-HHHHHHHh-cCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            111 11111110 0000001000000           00 000001111234566889999999999999999999884

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.78  E-value=1.8e-19  Score=128.42  Aligned_cols=128  Identities=23%  Similarity=0.323  Sum_probs=81.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCC---------------------------------------------ccccccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQ---------------------------------------------SMTQTQT   35 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~---------------------------------------------~~~~~~~   35 (164)
                      |+|||++.++.+||+|||++..+.....                                             .......
T Consensus       129 p~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (382)
T cd05625         129 PDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSL  208 (382)
T ss_pred             HHHEEECCCCCEEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhcccccccccccc
Confidence            6899999999999999998753210000                                             0001124


Q ss_pred             cccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhh
Q 039452           36 LATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA  115 (164)
Q Consensus        36 ~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (164)
                      .|++.|+|||.+ ....++.++|+||+||++|+|++|..||.........             ..+...    ......+
T Consensus       209 ~gt~~Y~aPE~~-~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~-------------~~i~~~----~~~~~~p  270 (382)
T cd05625         209 VGTPNYIAPEVL-LRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQ-------------MKVINW----QTSLHIP  270 (382)
T ss_pred             ccCcccCCHHHh-cCCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHH-------------HHHHcc----CCCcCCC
Confidence            689999999554 4556889999999999999999999999743211100             011100    0001111


Q ss_pred             hHHHHHHHHHHHHhhccccCccCCCC---HHHHHH
Q 039452          116 AKQQCVSFVFNLAMECTIESPERRIN---AKEIVT  147 (164)
Q Consensus       116 ~~~~~~~~~~~l~~~cl~~~p~~Rps---~~~vl~  147 (164)
                      ....+++++.+++.+++ .+|++|++   +.+++.
T Consensus       271 ~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~  304 (382)
T cd05625         271 PQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKA  304 (382)
T ss_pred             CcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhc
Confidence            11234555778887765 59999997   777664

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.78  E-value=5.6e-19  Score=119.49  Aligned_cols=121  Identities=24%  Similarity=0.376  Sum_probs=82.8

Q ss_pred             CcceEecCCc-------eEEEeccccceeccCCCCccccccccccccccCchhhhcc-CcccCccchHhHHHHHHHHHh-
Q 039452            1 PSNVLLDDNM-------VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGRE-GRVSTNGDVYSFGIMLMEAFT-   71 (164)
Q Consensus         1 p~Nill~~~~-------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~~Di~s~g~~~~~~~~-   71 (164)
                      |+||+++.++       .++|+|||.+..+..      .....++..|++||.+... ...+.++|+||+|+++|++++ 
T Consensus       129 p~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~  202 (259)
T cd05037         129 GKNILVARYGLNEGYVPFIKLSDPGIPITVLS------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSN  202 (259)
T ss_pred             cceEEEecCccccCCceeEEeCCCCccccccc------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhC
Confidence            7899999877       799999999876421      1233456789999655433 357889999999999999998 


Q ss_pred             cCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHH
Q 039452           72 RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTEL  149 (164)
Q Consensus        72 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l  149 (164)
                      |..|+.......  ......           ......         ......+.+++.+||..+|.+|||+.++++.|
T Consensus       203 ~~~p~~~~~~~~--~~~~~~-----------~~~~~~---------~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l  258 (259)
T cd05037         203 GEEPLSTLSSSE--KERFYQ-----------DQHRLP---------MPDCAELANLINQCWTYDPTKRPSFRAILRDL  258 (259)
T ss_pred             CCCCcccCCchh--HHHHHh-----------cCCCCC---------CCCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence            566765432111  000000           000000         00014588999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.78  E-value=4.8e-19  Score=131.26  Aligned_cols=143  Identities=18%  Similarity=0.188  Sum_probs=81.6

Q ss_pred             CcceEecC-CceEEEeccccceeccCCCCccccccccccccccCchhhhccC---------------------cccCccc
Q 039452            1 PSNVLLDD-NMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREG---------------------RVSTNGD   58 (164)
Q Consensus         1 p~Nill~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~---------------------~~~~~~D   58 (164)
                      |+|||++. ++.+||+|||+++.+.... ........+++.|+|||.+....                     .++.++|
T Consensus       283 P~NILl~~~~~~~KL~DFGlA~~l~~~~-~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D  361 (566)
T PLN03225        283 PQNIIFSEGSGSFKIIDLGAAADLRVGI-NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD  361 (566)
T ss_pred             HHHEEEeCCCCcEEEEeCCCcccccccc-ccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence            68999985 6899999999997653221 12234456889999997553221                     1234569


Q ss_pred             hHhHHHHHHHHHhcCCCCCccccCchhHHHHHHHhhh--hhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCc
Q 039452           59 VYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLS--VSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESP  136 (164)
Q Consensus        59 i~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  136 (164)
                      |||+||++|+|+++..++...   ...+...+.....  ......+......................++|+.+||+.||
T Consensus       362 VwSlGviL~el~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP  438 (566)
T PLN03225        362 IYSAGLIFLQMAFPNLRSDSN---LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKG  438 (566)
T ss_pred             cHHHHHHHHHHHhCcCCCchH---HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCc
Confidence            999999999999866554311   1111111110000  00001111000000000001111122346689999999999


Q ss_pred             cCCCCHHHHHH
Q 039452          137 ERRINAKEIVT  147 (164)
Q Consensus       137 ~~Rps~~~vl~  147 (164)
                      .+|||++++++
T Consensus       439 ~kR~ta~e~L~  449 (566)
T PLN03225        439 RQRISAKAALA  449 (566)
T ss_pred             ccCCCHHHHhC
Confidence            99999999987

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.78  E-value=2.2e-19  Score=129.20  Aligned_cols=122  Identities=23%  Similarity=0.328  Sum_probs=88.1

Q ss_pred             cceEec-CCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            2 SNVLLD-DNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         2 ~Nill~-~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      .||+|+ ..|.|||+|+|+|..+.    .......+|||.|||||.+-  ..|+..+||||||+.++||.|+..||....
T Consensus       174 DNIFinG~~G~VKIGDLGLAtl~r----~s~aksvIGTPEFMAPEmYE--E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~  247 (632)
T KOG0584|consen  174 DNIFVNGNLGEVKIGDLGLATLLR----KSHAKSVIGTPEFMAPEMYE--ENYNELVDVYAFGMCMLEMVTSEYPYSECT  247 (632)
T ss_pred             ceEEEcCCcCceeecchhHHHHhh----ccccceeccCccccChHHHh--hhcchhhhhhhhhHHHHHHHhccCChhhhC
Confidence            599997 45899999999998762    22234478999999997663  568999999999999999999999997543


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTE  148 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  148 (164)
                      +....+...    ..+..+..+.+.              -.+++++++.+||.. .++|+|+.++|..
T Consensus       248 n~AQIYKKV----~SGiKP~sl~kV--------------~dPevr~fIekCl~~-~~~R~sa~eLL~d  296 (632)
T KOG0584|consen  248 NPAQIYKKV----TSGIKPAALSKV--------------KDPEVREFIEKCLAT-KSERLSAKELLKD  296 (632)
T ss_pred             CHHHHHHHH----HcCCCHHHhhcc--------------CCHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence            332222211    111111111111              123488999999999 9999999999873

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.78  E-value=2e-19  Score=127.98  Aligned_cols=129  Identities=25%  Similarity=0.323  Sum_probs=82.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc---------------------------------------------cccccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS---------------------------------------------MTQTQT   35 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~---------------------------------------------~~~~~~   35 (164)
                      |+|||++.++.+||+|||+++.+......                                             ......
T Consensus       129 p~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (377)
T cd05629         129 PDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYST  208 (377)
T ss_pred             HHHEEECCCCCEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccccccccc
Confidence            68999999999999999998643110000                                             000124


Q ss_pred             cccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhh
Q 039452           36 LATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA  115 (164)
Q Consensus        36 ~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (164)
                      .|++.|+|||.+ ....++.++|+||+||++|+|++|..||....... .+.            .+...    ......+
T Consensus       209 ~gt~~y~aPE~~-~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~-~~~------------~i~~~----~~~~~~p  270 (377)
T cd05629         209 VGTPDYIAPEIF-LQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHE-TYR------------KIINW----RETLYFP  270 (377)
T ss_pred             CCCccccCHHHH-ccCCCCCceeeEecchhhhhhhcCCCCCCCCCHHH-HHH------------HHHcc----CCccCCC
Confidence            689999999554 55668899999999999999999999996432111 000            01100    0000001


Q ss_pred             hHHHHHHHHHHHHhhccccCccCC---CCHHHHHHH
Q 039452          116 AKQQCVSFVFNLAMECTIESPERR---INAKEIVTE  148 (164)
Q Consensus       116 ~~~~~~~~~~~l~~~cl~~~p~~R---ps~~~vl~~  148 (164)
                      ....++..+.+++.+||. +|.+|   +|+.+++..
T Consensus       271 ~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h  305 (377)
T cd05629         271 DDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSH  305 (377)
T ss_pred             CCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence            111234568899999997 77775   599888763

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.78  E-value=1e-18  Score=118.48  Aligned_cols=130  Identities=25%  Similarity=0.317  Sum_probs=85.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccc--cccccccccccCchhhhccC--cccCccchHhHHHHHHHHHhcCCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMT--QTQTLATIGYMAPVEYGREG--RVSTNGDVYSFGIMLMEAFTRKKPT   76 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~--~~~~~~~~~~~~pe~~~~~~--~~~~~~Di~s~g~~~~~~~~g~~p~   76 (164)
                      |+||+++.++.+||+|||.+...........  .....++..|++||.+....  ..+.++|+||||++++++++|..||
T Consensus       127 ~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf  206 (264)
T cd06626         127 PANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPW  206 (264)
T ss_pred             HHHEEECCCCCEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCc
Confidence            5799999999999999999876532221111  11234678899995554322  2778899999999999999999999


Q ss_pred             CccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           77 DEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ...........            ...    . ......+....++..+.+++.+||+.+|.+|||+.+++.
T Consensus       207 ~~~~~~~~~~~------------~~~----~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         207 SELDNEFQIMF------------HVG----A-GHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             cCCcchHHHHH------------HHh----c-CCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            64321110000            000    0 000111111223555789999999999999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.77  E-value=9.1e-19  Score=118.77  Aligned_cols=126  Identities=26%  Similarity=0.310  Sum_probs=86.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.+..+....   ......++..|++||. .....++.++|+||+|+++|++++|..||....
T Consensus       121 ~~nilv~~~~~~~l~df~~~~~~~~~~---~~~~~~~~~~~~~PE~-~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  196 (262)
T cd05572         121 PENLLLDSNGYVKLVDFGFAKKLKSGQ---KTWTFCGTPEYVAPEI-ILNKGYDFSVDYWSLGILLYELLTGRPPFGEDD  196 (262)
T ss_pred             HHHEEEcCCCCEEEeeCCcccccCccc---ccccccCCcCccChhH-hcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCC
Confidence            579999999999999999987753221   2223457888999955 445567889999999999999999999996533


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCC-----HHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRIN-----AKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~vl~  147 (164)
                      .......           .....      .......+...+..+.+++.+||+.+|++||+     ++++++
T Consensus       197 ~~~~~~~-----------~~~~~------~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~  251 (262)
T cd05572         197 EDPMEIY-----------NDILK------GNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK  251 (262)
T ss_pred             CCHHHHH-----------HHHhc------cCCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence            2111110           01110      00011112223566899999999999999999     677665

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.77  E-value=8.5e-19  Score=119.14  Aligned_cols=126  Identities=19%  Similarity=0.210  Sum_probs=84.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc-cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS-MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+||+++.++.++|+|||.++.+...... .......++..|++||.+ ....++.++|+||||+++|++++|..||...
T Consensus       134 p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Dv~slG~il~el~~g~~p~~~~  212 (265)
T cd06652         134 GANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVI-SGEGYGRKADIWSVGCTVVEMLTEKPPWAEF  212 (265)
T ss_pred             HHHEEecCCCCEEECcCccccccccccccccccccCCCCccccChhhh-cCCCCCcchhHHHHHHHHHHHhhCCCCCCcc
Confidence            67999999999999999998765221111 111223477899999655 4456788999999999999999999998642


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .....             .....    ..  ......+......+.+++.+||. +|++||+++++++
T Consensus       213 ~~~~~-------------~~~~~----~~--~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~  260 (265)
T cd06652         213 EAMAA-------------IFKIA----TQ--PTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR  260 (265)
T ss_pred             chHHH-------------HHHHh----cC--CCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence            11100             00000    00  00111233445567889999984 9999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.77  E-value=6.5e-19  Score=124.84  Aligned_cols=77  Identities=27%  Similarity=0.406  Sum_probs=59.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc---------------------------------cccccccccccccCchhh
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS---------------------------------MTQTQTLATIGYMAPVEY   47 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~~pe~~   47 (164)
                      |+|||++.++.+||+|||+++.+......                                 .......||+.|+|||.+
T Consensus       129 p~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~  208 (363)
T cd05628         129 PDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVF  208 (363)
T ss_pred             HHHeEECCCCCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHH
Confidence            68999999999999999998754211000                                 001234689999999554


Q ss_pred             hccCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452           48 GREGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus        48 ~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                       ....++.++|+||+||++|+|++|..||..
T Consensus       209 -~~~~~~~~~DvwSlGvil~ell~G~~Pf~~  238 (363)
T cd05628         209 -MQTGYNKLCDWWSLGVIMYEMLIGYPPFCS  238 (363)
T ss_pred             -cCCCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence             455688899999999999999999999964

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.77  E-value=5.9e-19  Score=119.08  Aligned_cols=124  Identities=24%  Similarity=0.296  Sum_probs=86.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.+.......  .......++..|++||. ......+.++|+||+|++++++++|..||....
T Consensus       131 ~~nil~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~y~~pe~-~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~  207 (258)
T cd08215         131 PQNIFLTSNGLVKLGDFGISKVLSSTV--DLAKTVVGTPYYLSPEL-CQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN  207 (258)
T ss_pred             hHHeEEcCCCcEEECCccceeecccCc--ceecceeeeecccChhH-hccCCCCccccHHHHHHHHHHHHcCCCCCCCCc
Confidence            679999999999999999987652221  12233457888999954 445557889999999999999999999986432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ..     .....        .....       ....+..++..+.+++.+||..+|++|||+.++++
T Consensus       208 ~~-----~~~~~--------~~~~~-------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~  254 (258)
T cd08215         208 LL-----ELALK--------ILKGQ-------YPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQ  254 (258)
T ss_pred             HH-----HHHHH--------HhcCC-------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            11     00000        00000       00111234556889999999999999999999886

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.77  E-value=1.2e-18  Score=116.29  Aligned_cols=130  Identities=18%  Similarity=0.170  Sum_probs=96.7

Q ss_pred             CcceEec---CCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCC
Q 039452            1 PSNVLLD---DNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         1 p~Nill~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      |+|+|..   .+..+||+|||+++.-   ...........|++|.|| +++....++...|+||+|++.|-++-|.+||.
T Consensus       189 pENLLyt~t~~na~lKLtDfGFAK~t---~~~~~L~TPc~TPyYvaP-evlg~eKydkscdmwSlgVimYIlLCGyPPFY  264 (400)
T KOG0604|consen  189 PENLLYTTTSPNAPLKLTDFGFAKET---QEPGDLMTPCFTPYYVAP-EVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY  264 (400)
T ss_pred             hhheeeecCCCCcceEeccccccccc---CCCccccCCcccccccCH-HHhCchhcCCCCCccchhHHHHHhhcCCCccc
Confidence            6899986   4567899999999863   223334456789999999 66666678999999999999999999999998


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .......             ...+-++........+.+....++....++++++|..+|.+|.|+.++++
T Consensus       265 S~hg~ai-------------spgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~  321 (400)
T KOG0604|consen  265 SNHGLAI-------------SPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD  321 (400)
T ss_pred             ccCCccC-------------ChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence            6432111             11122222233344455556678888999999999999999999999875

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.77  E-value=1.4e-18  Score=118.37  Aligned_cols=123  Identities=19%  Similarity=0.268  Sum_probs=86.0

Q ss_pred             CcceEecCCc-eEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDDNM-VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+||+++.++ .++|+|||.+......      ....++..|+|||.+ ....++.++|+||+|++++++++|..||...
T Consensus       137 p~nil~~~~~~~~~l~dfg~~~~~~~~------~~~~~~~~y~aPE~~-~~~~~~~~~DvwslG~il~~l~~g~~p~~~~  209 (267)
T PHA03390        137 LENVLYDRAKDRIYLCDYGLCKIIGTP------SCYDGTLDYFSPEKI-KGHNYDVSFDWWAVGVLTYELLTGKHPFKED  209 (267)
T ss_pred             HHHEEEeCCCCeEEEecCccceecCCC------ccCCCCCcccChhhh-cCCCCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence            6799999888 9999999998765211      123578899999544 4556788999999999999999999999743


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCC-HHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRIN-AKEIVT  147 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-~~~vl~  147 (164)
                      .........+..            ..     ......+...+..+.+++.+||+.+|.+||+ ++++++
T Consensus       210 ~~~~~~~~~~~~------------~~-----~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~  261 (267)
T PHA03390        210 EDEELDLESLLK------------RQ-----QKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK  261 (267)
T ss_pred             CcchhhHHHHHH------------hh-----cccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence            322211111110            00     0111112245666899999999999999996 588874

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.77  E-value=7.6e-19  Score=122.24  Aligned_cols=127  Identities=23%  Similarity=0.316  Sum_probs=85.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc---------------------------cccccccccccccCchhhhccCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS---------------------------MTQTQTLATIGYMAPVEYGREGRV   53 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~pe~~~~~~~~   53 (164)
                      |+||+++.++.++|+|||++.........                           .......|+..|++||.. ....+
T Consensus       131 p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~-~~~~~  209 (316)
T cd05574         131 PENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVI-SGDGH  209 (316)
T ss_pred             hHHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHH-cCCCC
Confidence            68999999999999999998654211100                           011123578889999554 45567


Q ss_pred             cCccchHhHHHHHHHHHhcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccc
Q 039452           54 STNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTI  133 (164)
Q Consensus        54 ~~~~Di~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  133 (164)
                      +.++|+||+|+++|++++|..||........             ........      .........+..+.+++.+||.
T Consensus       210 ~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~-------------~~~~~~~~------~~~~~~~~~~~~~~~li~~~l~  270 (316)
T cd05574         210 GSAVDWWTLGILLYEMLYGTTPFKGSNRDET-------------FSNILKKE------VTFPGSPPVSSSARDLIRKLLV  270 (316)
T ss_pred             CchHHHHHHHHHHHHHhhCCCCCCCCchHHH-------------HHHHhcCC------ccCCCccccCHHHHHHHHHHcc
Confidence            8899999999999999999999864321111             11111111      0011111246669999999999


Q ss_pred             cCccCCCC----HHHHHH
Q 039452          134 ESPERRIN----AKEIVT  147 (164)
Q Consensus       134 ~~p~~Rps----~~~vl~  147 (164)
                      .||++|||    +++++.
T Consensus       271 ~~p~~R~s~~~~~~~ll~  288 (316)
T cd05574         271 KDPSKRLGSKRGAAEIKQ  288 (316)
T ss_pred             CCHhHCCCchhhHHHHHc
Confidence            99999999    777766

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.77  E-value=8.7e-19  Score=119.63  Aligned_cols=129  Identities=22%  Similarity=0.384  Sum_probs=86.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.++++|||.+....... ........++..|++||.+ .....+.++|+||+|++++++++ |..||...
T Consensus       145 p~Nili~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~y~~PE~~-~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~  222 (275)
T cd05046         145 ARNCLVSSQREVKVSLLSLSKDVYNSE-YYKLRNALIPLRWLAPEAV-QEDDFSTKSDVWSFGVLMWEVFTQGELPFYGL  222 (275)
T ss_pred             cceEEEeCCCcEEEcccccccccCccc-ccccCCceeEEeecChhhh-ccCCCCchhhHHHHHHHHHHHHhCCCCCcccc
Confidence            789999999999999999886542111 1122233456779999544 34457788999999999999998 77787542


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELS  150 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~  150 (164)
                      ....  .               +......  ......+..++..+.+++.+||+.+|++|||+.+++..|.
T Consensus       223 ~~~~--~---------------~~~~~~~--~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         223 SDEE--V---------------LNRLQAG--KLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             chHH--H---------------HHHHHcC--CcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence            1111  0               0000000  0001112234556899999999999999999999998774

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.77  E-value=1.1e-18  Score=122.14  Aligned_cols=155  Identities=19%  Similarity=0.301  Sum_probs=90.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCcc-----ccccccccccccCchhhhcc-CcccCccchHhHHHHHHHHHhcCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSM-----TQTQTLATIGYMAPVEYGRE-GRVSTNGDVYSFGIMLMEAFTRKK   74 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~-----~~~~~~~~~~~~~pe~~~~~-~~~~~~~Di~s~g~~~~~~~~g~~   74 (164)
                      |+||+++.++.++++||+.+..........     ......++..|++||.+... ..++.++|+||+||++|++++|..
T Consensus       129 p~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~  208 (328)
T cd08226         129 ASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRV  208 (328)
T ss_pred             HHHEEEeCCCcEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCC
Confidence            689999999999999997654332111110     01112345679999665433 346789999999999999999999


Q ss_pred             CCCccccCchhHHHHHHHh--------hhhhhHH---------------Hhhhh---cccccchhhhhHHHHHHHHHHHH
Q 039452           75 PTDEMFSGEMTLKRWINDL--------LSVSVME---------------VVDAN---LLTREDRHFAAKQQCVSFVFNLA  128 (164)
Q Consensus        75 p~~~~~~~~~~~~~~~~~~--------~~~~~~~---------------~~~~~---~~~~~~~~~~~~~~~~~~~~~l~  128 (164)
                      ||.................        .......               .....   ..............++..+.+++
T Consensus       209 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  288 (328)
T cd08226         209 PFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLV  288 (328)
T ss_pred             CCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHH
Confidence            9975432211111000000        0000000               00000   00000111222345677899999


Q ss_pred             hhccccCccCCCCHHHHHH--HHHHHHHH
Q 039452          129 MECTIESPERRINAKEIVT--ELSKIRDS  155 (164)
Q Consensus       129 ~~cl~~~p~~Rps~~~vl~--~l~~~~~~  155 (164)
                      .+||+.||++|||++++++  ++..+.++
T Consensus       289 ~~~l~~dP~~Rpta~e~l~~~~~~~~~~~  317 (328)
T cd08226         289 ELCLQQDPEKRPSASSLLSHAFFKQVKEQ  317 (328)
T ss_pred             HHHccCCcccCCCHHHHhhCHHHHHHHHh
Confidence            9999999999999999964  45555544

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.77  E-value=6.1e-19  Score=119.15  Aligned_cols=124  Identities=23%  Similarity=0.281  Sum_probs=83.7

Q ss_pred             CcceEecCCc-eEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDDNM-VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+||+++.++ .++++|||.+.......  .......++..|++|| +.....++.++|+||+|++++++++|..||...
T Consensus       129 ~~nil~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~~~ape-~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~  205 (257)
T cd08225         129 SQNIFLSKNGMVAKLGDFGIARQLNDSM--ELAYTCVGTPYYLSPE-ICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGN  205 (257)
T ss_pred             HHHEEEcCCCCeEEecccccchhccCCc--ccccccCCCccccCHH-HHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCc
Confidence            5799998775 56999999887652211  1122235788899995 444556788999999999999999999998632


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ..     .....        ........       ......+..+.+++.+||..+|++|||+.+++.
T Consensus       206 ~~-----~~~~~--------~~~~~~~~-------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~  253 (257)
T cd08225         206 NL-----HQLVL--------KICQGYFA-------PISPNFSRDLRSLISQLFKVSPRDRPSITSILK  253 (257)
T ss_pred             cH-----HHHHH--------HHhcccCC-------CCCCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence            11     11111        01110000       011223455889999999999999999999976

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.77  E-value=1.3e-18  Score=117.47  Aligned_cols=122  Identities=24%  Similarity=0.272  Sum_probs=87.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+|++|||.+......    ......++..|++||. .....++.++|+||+|++++++++|..||....
T Consensus       131 ~~ni~~~~~~~~kl~d~g~~~~~~~~----~~~~~~~~~~~~~Pe~-~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~  205 (256)
T cd08530         131 SANILLVANDLVKIGDLGISKVLKKN----MAKTQIGTPHYMAPEV-WKGRPYSYKSDIWSLGCLLYEMATFAPPFEARS  205 (256)
T ss_pred             cceEEEecCCcEEEeeccchhhhccC----CcccccCCccccCHHH-HCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            68999999999999999998765322    2223457788999954 455667788999999999999999999986432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ...  ..            ..+....      ....+...+.++.+++.+||+.+|++|||+.++++
T Consensus       206 ~~~--~~------------~~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  252 (256)
T cd08530         206 MQD--LR------------YKVQRGK------YPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA  252 (256)
T ss_pred             HHH--HH------------HHHhcCC------CCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            111  00            0010000      01112245566899999999999999999999886

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.77  E-value=9e-19  Score=121.80  Aligned_cols=122  Identities=23%  Similarity=0.275  Sum_probs=84.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhh--ccCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYG--REGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~--~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+||+++.++.++|+|||.+....      ......++..|++||.+.  ....++.++|+||+|+++|++++|..||..
T Consensus       149 p~nili~~~~~~kL~dfg~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~  222 (313)
T cd06633         149 AGNILLTEPGQVKLADFGSASKSS------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN  222 (313)
T ss_pred             hhhEEECCCCCEEEeecCCCcccC------CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            689999999999999999875421      112345778899996653  234577889999999999999999999864


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ......  .           .......      .........+..+.+++.+||+.+|.+||++.+++.
T Consensus       223 ~~~~~~--~-----------~~~~~~~------~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~  272 (313)
T cd06633         223 MNAMSA--L-----------YHIAQND------SPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLR  272 (313)
T ss_pred             CChHHH--H-----------HHHHhcC------CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            321110  0           0000000      000011123345789999999999999999999886

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.77  E-value=1.4e-18  Score=122.76  Aligned_cols=126  Identities=21%  Similarity=0.225  Sum_probs=93.9

Q ss_pred             CcceEecC----CceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCC
Q 039452            1 PSNVLLDD----NMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPT   76 (164)
Q Consensus         1 p~Nill~~----~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~   76 (164)
                      |+|+|+..    ++.+|++|||++.....   .......+||+.|+|| ++.....++...|+||+|+++|.|+.|..||
T Consensus       163 pEN~L~~~~~~~~~~ik~~DFGla~~~~~---~~~~~~~~Gtp~y~AP-Evl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF  238 (382)
T KOG0032|consen  163 PENLLLASKDEGSGRIKLIDFGLAKFIKP---GERLHTIVGTPEYVAP-EVLGGRPYGDEVDVWSIGVILYILLSGVPPF  238 (382)
T ss_pred             HHHeeeccccCCCCcEEEeeCCCceEccC---CceEeeecCCccccCc-hhhcCCCCCcccchhHHHHHHHHHhhCCCCC
Confidence            68999963    35799999999988632   3344567899999999 5555567889999999999999999999999


Q ss_pred             CccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           77 DEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ..........             .+.    .............++..+.+++..++..||..|+|++++++
T Consensus       239 ~~~~~~~~~~-------------~i~----~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~  292 (382)
T KOG0032|consen  239 WGETEFEIFL-------------AIL----RGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ  292 (382)
T ss_pred             cCCChhHHHH-------------HHH----cCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence            8643322211             111    11112233334556777999999999999999999999998

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.77  E-value=1.3e-18  Score=117.33  Aligned_cols=128  Identities=23%  Similarity=0.310  Sum_probs=88.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.+................++..|.+|| .......+.++|+||+|++++++++|..||....
T Consensus       129 p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE-~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~  207 (260)
T cd06606         129 GANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPE-VIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG  207 (260)
T ss_pred             HHHEEEcCCCCEEEcccccEEecccccccccccCCCCCccccCHh-hhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            679999999999999999988763222111123456788999995 4445558889999999999999999999986432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      . ..  .         .......      .......+...+..+.+++.+||..+|.+||++.+++.
T Consensus       208 ~-~~--~---------~~~~~~~------~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~  256 (260)
T cd06606         208 N-PM--A---------ALYKIGS------SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ  256 (260)
T ss_pred             c-hH--H---------HHHhccc------cCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence            0 00  0         0000000      01111122333566899999999999999999999886

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=9.5e-19  Score=117.92  Aligned_cols=124  Identities=24%  Similarity=0.380  Sum_probs=86.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.+........  ......++..|++||.. .....+.++|+|++|++++++++|..||....
T Consensus       127 p~ni~i~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~y~~pe~~-~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~  203 (254)
T cd06627         127 AANILTTKDGVVKLADFGVATKLNDVSK--DDASVVGTPYWMAPEVI-EMSGASTASDIWSLGCTVIELLTGNPPYYDLN  203 (254)
T ss_pred             HHHEEECCCCCEEEeccccceecCCCcc--cccccccchhhcCHhhh-cCCCCCcchhHHHHHHHHHHHHhCCCCCCCcc
Confidence            6899999999999999999887532211  12234578889999654 34447789999999999999999999986432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ....             ......       ......+..++..+.+++.+||..+|++|||+.+++.
T Consensus       204 ~~~~-------------~~~~~~-------~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  250 (254)
T cd06627         204 PMAA-------------LFRIVQ-------DDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK  250 (254)
T ss_pred             HHHH-------------HHHHhc-------cCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence            1100             000000       0011122334566889999999999999999999875

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.76  E-value=9.7e-19  Score=122.58  Aligned_cols=131  Identities=18%  Similarity=0.233  Sum_probs=84.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhc----cCcccCccchHhHHHHHHHHHhcCCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGR----EGRVSTNGDVYSFGIMLMEAFTRKKPT   76 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~----~~~~~~~~Di~s~g~~~~~~~~g~~p~   76 (164)
                      |+|||++.++.+||+|||++..+.... ........|++.|+|||.+..    ...++.++|+||+||++|++++|..||
T Consensus       130 p~Nili~~~~~~kL~DfG~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf  208 (332)
T cd05623         130 PDNILMDMNGHIRLADFGSCLKLMEDG-TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPF  208 (332)
T ss_pred             HHHEEECCCCCEEEeecchheecccCC-cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCC
Confidence            689999999999999999987642211 112223568999999966542    345778999999999999999999999


Q ss_pred             CccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccC--CCCHHHHHHH
Q 039452           77 DEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPER--RINAKEIVTE  148 (164)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rps~~~vl~~  148 (164)
                      ........             ...+.....   ..........++..+.+++.+|+..++..  |++++++++.
T Consensus       209 ~~~~~~~~-------------~~~i~~~~~---~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h  266 (332)
T cd05623         209 YAESLVET-------------YGKIMNHKE---RFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH  266 (332)
T ss_pred             CCCCHHHH-------------HHHHhCCCc---cccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence            64311110             001111000   00000111234566888999988654443  6788888764

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.76  E-value=1.4e-18  Score=120.47  Aligned_cols=121  Identities=21%  Similarity=0.210  Sum_probs=86.8

Q ss_pred             cceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcccc
Q 039452            2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMFS   81 (164)
Q Consensus         2 ~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~~   81 (164)
                      +|||++.++.+||+|||++-.+.   ...-.....|++.|.+||.+.....-.+.+|.||+|+++|.+..|..||++...
T Consensus       182 ENILLD~N~NiKIADFGLSNly~---~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh  258 (668)
T KOG0611|consen  182 ENILLDQNNNIKIADFGLSNLYA---DKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH  258 (668)
T ss_pred             hheeecCCCCeeeeccchhhhhc---cccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH
Confidence            69999999999999999987652   222345678999999995555444456789999999999999999999985311


Q ss_pred             CchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           82 GEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                                       ..+++......  +..+   .-+.++..|++.||..||+.|.|+.++..
T Consensus       259 -----------------k~lvrQIs~Ga--YrEP---~~PSdA~gLIRwmLmVNP~RRATieDiAs  302 (668)
T KOG0611|consen  259 -----------------KRLVRQISRGA--YREP---ETPSDASGLIRWMLMVNPERRATIEDIAS  302 (668)
T ss_pred             -----------------HHHHHHhhccc--ccCC---CCCchHHHHHHHHHhcCcccchhHHHHhh
Confidence                             11122111111  1111   11334678999999999999999998865

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.76  E-value=2.2e-19  Score=127.75  Aligned_cols=129  Identities=22%  Similarity=0.284  Sum_probs=82.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCC-----------------------------------------ccccccccccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQ-----------------------------------------SMTQTQTLATI   39 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~-----------------------------------------~~~~~~~~~~~   39 (164)
                      |+|||++.++.+||+|||++..+.....                                         ........|++
T Consensus       129 p~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  208 (376)
T cd05598         129 PDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTP  208 (376)
T ss_pred             HHHEEECCCCCEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCc
Confidence            6899999999999999998743210000                                         00011246899


Q ss_pred             cccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHH
Q 039452           40 GYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQ  119 (164)
Q Consensus        40 ~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (164)
                      .|+|||. .....++.++|+||+||++|+|++|..||..........             .+...    ...........
T Consensus       209 ~y~aPE~-~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~-------------~i~~~----~~~~~~~~~~~  270 (376)
T cd05598         209 NYIAPEV-LLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQL-------------KVINW----ETTLHIPSQAK  270 (376)
T ss_pred             cccCHHH-HcCCCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHH-------------HHhcc----CccccCCCCCC
Confidence            9999954 455667889999999999999999999997432111100             00000    00000111123


Q ss_pred             HHHHHHHHHhhccccCccCCC---CHHHHHHH
Q 039452          120 CVSFVFNLAMECTIESPERRI---NAKEIVTE  148 (164)
Q Consensus       120 ~~~~~~~l~~~cl~~~p~~Rp---s~~~vl~~  148 (164)
                      ++..+.+++.+|+ .+|.+|+   |+.+++..
T Consensus       271 ~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h  301 (376)
T cd05598         271 LSREASDLILRLC-CGAEDRLGKNGADEIKAH  301 (376)
T ss_pred             CCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence            4455778888865 5999999   88888753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.76  E-value=3.4e-18  Score=119.06  Aligned_cols=146  Identities=22%  Similarity=0.347  Sum_probs=100.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc--cccccccccccccCchhhhccCc---cc--CccchHhHHHHHHHHHhc-
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS--MTQTQTLATIGYMAPVEYGREGR---VS--TNGDVYSFGIMLMEAFTR-   72 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~---~~--~~~Di~s~g~~~~~~~~g-   72 (164)
                      +.|||+.++|.+.|+|+|+|.........  ......+||..|||||.+.....   |.  ..+||||||.++||+.-+ 
T Consensus       344 SKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc  423 (513)
T KOG2052|consen  344 SKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRC  423 (513)
T ss_pred             cccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHh
Confidence            47999999999999999999876433222  23455789999999966543222   11  359999999999998642 


Q ss_pred             ---------CCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHH
Q 039452           73 ---------KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAK  143 (164)
Q Consensus        73 ---------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~  143 (164)
                               +.||.+..+.+..+.++         .+.+.-....+..++......+-..+.++|+-||..||.-|-|+-
T Consensus       424 ~~ggi~eey~~Pyyd~Vp~DPs~eeM---------rkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltAL  494 (513)
T KOG2052|consen  424 ESGGIVEEYQLPYYDVVPSDPSFEEM---------RKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTAL  494 (513)
T ss_pred             hcCCEehhhcCCcccCCCCCCCHHHH---------hcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHH
Confidence                     46887766665544432         222222222222222222334455688999999999999999999


Q ss_pred             HHHHHHHHHHHH
Q 039452          144 EIVTELSKIRDS  155 (164)
Q Consensus       144 ~vl~~l~~~~~~  155 (164)
                      .+.+.|.++.+.
T Consensus       495 riKKtl~~l~~~  506 (513)
T KOG2052|consen  495 RIKKTLAKLSNS  506 (513)
T ss_pred             HHHHHHHHHhcC
Confidence            999999988853

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.76  E-value=1e-18  Score=119.45  Aligned_cols=126  Identities=25%  Similarity=0.321  Sum_probs=85.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.+.....   ........++..|++||.. ....++.++|+||+|++++++++|..||....
T Consensus       123 p~Nil~~~~~~~~l~dfg~~~~~~~---~~~~~~~~~~~~y~~PE~~-~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  198 (277)
T cd05577         123 PENVLLDDHGNVRISDLGLAVELKG---GKKIKGRAGTPGYMAPEVL-QGEVYDFSVDWFALGCTLYEMIAGRSPFRQRK  198 (277)
T ss_pred             HHHEEECCCCCEEEccCcchhhhcc---CCccccccCCCCcCCHHHh-cCCCCCchhhhHHHHHHHHHHhhCCCCCCCCc
Confidence            5799999999999999999876522   1122234567889999554 44557889999999999999999999986432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCC-----CHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRI-----NAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~vl~  147 (164)
                      .... ..            .+.....    ......+...++.+.+++.+||+.||.+||     ++.+++.
T Consensus       199 ~~~~-~~------------~~~~~~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~  253 (277)
T cd05577         199 EKVE-KE------------ELKRRTL----EMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE  253 (277)
T ss_pred             cccc-HH------------HHHhccc----cccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence            2110 00            0000000    001111223456689999999999999999     6666654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.76  E-value=1.4e-18  Score=119.58  Aligned_cols=120  Identities=19%  Similarity=0.248  Sum_probs=84.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||++......     .....+++.|++||.+ .....+.++|+||+|+++|++++|..||....
T Consensus       129 p~nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  202 (290)
T cd05580         129 PENLLLDSDGYIKITDFGFAKRVKGR-----TYTLCGTPEYLAPEII-LSKGYGKAVDWWALGILIYEMLAGYPPFFDDN  202 (290)
T ss_pred             HHHEEECCCCCEEEeeCCCccccCCC-----CCCCCCCccccChhhh-cCCCCCccccHHHHHHHHHHHHhCCCCCCCCC
Confidence            67999999999999999998765222     2234578899999654 44567788999999999999999999986432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCC-----CHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRI-----NAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~vl~  147 (164)
                      ...  ..           ......        ....+...+..+.+++.+||..||.+|+     +++++++
T Consensus       203 ~~~--~~-----------~~~~~~--------~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~  253 (290)
T cd05580         203 PIQ--IY-----------EKILEG--------KVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN  253 (290)
T ss_pred             HHH--HH-----------HHHhcC--------CccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence            100  00           000100        0011222345688999999999999999     6777664

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.76  E-value=1.7e-18  Score=116.12  Aligned_cols=139  Identities=20%  Similarity=0.270  Sum_probs=93.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||++..+..+||.|||+++.-   ......+..+.+..|.|||.+. +..+...+||||.||++.||+.|+..|.   
T Consensus       146 Psnivv~~~~~lKi~dfg~ar~e---~~~~~mtpyVvtRyyrapevil-~~~~ke~vdiwSvGci~gEli~~~Vlf~---  218 (369)
T KOG0665|consen  146 PSNIVVNSDCTLKILDFGLARTE---DTDFMMTPYVVTRYYRAPEVIL-GMGYKENVDIWSVGCIMGELILGTVLFP---  218 (369)
T ss_pred             cccceecchhheeeccchhhccc---CcccccCchhheeeccCchhee-ccCCcccchhhhhhhHHHHHhhceEEec---
Confidence            89999999999999999999863   3334566778899999995555 4448999999999999999999999876   


Q ss_pred             cCchhHHHHHHHh--hhhhhHHHhhhhccccc------------chh-----------hhhHHHHHHHHHHHHhhccccC
Q 039452           81 SGEMTLKRWINDL--LSVSVMEVVDANLLTRE------------DRH-----------FAAKQQCVSFVFNLAMECTIES  135 (164)
Q Consensus        81 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~------------~~~-----------~~~~~~~~~~~~~l~~~cl~~~  135 (164)
                       +..+..+|..-.  .+.....+.+.......            ...           ......-..-+++++.+||-+|
T Consensus       219 -g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~  297 (369)
T KOG0665|consen  219 -GKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVID  297 (369)
T ss_pred             -CchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccC
Confidence             334444443211  11111111111110000            000           0000112334789999999999


Q ss_pred             ccCCCCHHHHHH
Q 039452          136 PERRINAKEIVT  147 (164)
Q Consensus       136 p~~Rps~~~vl~  147 (164)
                      |++|.|+.++|.
T Consensus       298 pe~Risv~daL~  309 (369)
T KOG0665|consen  298 PEKRISVDDALR  309 (369)
T ss_pred             hhhcccHHHHhc
Confidence            999999999886

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.75  E-value=1.2e-18  Score=129.26  Aligned_cols=136  Identities=26%  Similarity=0.433  Sum_probs=103.5

Q ss_pred             cceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCccc
Q 039452            2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEMF   80 (164)
Q Consensus         2 ~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~~   80 (164)
                      .|||+.+...+||.|||+++.+.............-.+.|+|- +......++..+||||||+.+||++| |..|+..+.
T Consensus       827 RNVLVksP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmal-e~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~  905 (1177)
T KOG1025|consen  827 RNVLVKSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMAL-ESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIP  905 (1177)
T ss_pred             hheeecCCCeEEEEecchhhccCcccccccccccccCcHHHHH-HHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCC
Confidence            5999999999999999999987433333233333345678888 55556779999999999999999997 889987653


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhhc
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFR  158 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~~  158 (164)
                      ..+              ..+++...      .+...|+.|+.+++.+|.+||..|++.||+++++...+.++.+...+
T Consensus       906 ~~e--------------I~dlle~g------eRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardpqr  963 (1177)
T KOG1025|consen  906 AEE--------------IPDLLEKG------ERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDPQR  963 (1177)
T ss_pred             HHH--------------hhHHHhcc------ccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCcce
Confidence            322              22222221      22556788999999999999999999999999999999888766554

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.75  E-value=2.8e-18  Score=120.18  Aligned_cols=131  Identities=19%  Similarity=0.229  Sum_probs=82.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhc----cCcccCccchHhHHHHHHHHHhcCCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGR----EGRVSTNGDVYSFGIMLMEAFTRKKPT   76 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~----~~~~~~~~Di~s~g~~~~~~~~g~~p~   76 (164)
                      |+|||++.++.+||+|||++..+.... ........|++.|+|||.+..    ...++.++|+||+||++|+|++|..||
T Consensus       130 p~Nill~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf  208 (331)
T cd05597         130 PDNVLLDKNGHIRLADFGSCLRLLADG-TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPF  208 (331)
T ss_pred             HHHEEECCCCCEEEEECCceeecCCCC-CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCC
Confidence            679999999999999999987653211 112223468999999976642    234678899999999999999999999


Q ss_pred             CccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCc--cCCCCHHHHHHH
Q 039452           77 DEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESP--ERRINAKEIVTE  148 (164)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p--~~Rps~~~vl~~  148 (164)
                      ........             ...+......   .........++..+.+++.+|+..++  ..|++++++++.
T Consensus       209 ~~~~~~~~-------------~~~i~~~~~~---~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h  266 (331)
T cd05597         209 YAESLVET-------------YGKIMNHKEH---FQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH  266 (331)
T ss_pred             CCCCHHHH-------------HHHHHcCCCc---ccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence            64211110             0011110000   00000112245567888888776533  337888888764

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.75  E-value=1.9e-18  Score=122.43  Aligned_cols=118  Identities=22%  Similarity=0.286  Sum_probs=86.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|.+++.+|.+||.|||++..+..+.   ..+...||+.|.|||.++ ...++.++|.|++|+++||+++|.+||+.. 
T Consensus       548 PENllLd~~Gy~KLVDFGFAKki~~g~---KTwTFcGTpEYVAPEIIL-nKGHD~avDyWaLGIli~ELL~G~pPFs~~-  622 (732)
T KOG0614|consen  548 PENLLLDNRGYLKLVDFGFAKKIGSGR---KTWTFCGTPEYVAPEIIL-NKGHDRAVDYWALGILIYELLTGSPPFSGV-  622 (732)
T ss_pred             hhheeeccCCceEEeehhhHHHhccCC---ceeeecCCcccccchhhh-ccCcchhhHHHHHHHHHHHHHcCCCCCCCC-
Confidence            799999999999999999999873332   335678999999995555 455788999999999999999999999843 


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCC
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRIN  141 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps  141 (164)
                       +.+.....+            -+++     .....|..++....+++++..+.+|.+|..
T Consensus       623 -dpmktYn~I------------LkGi-----d~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG  665 (732)
T KOG0614|consen  623 -DPMKTYNLI------------LKGI-----DKIEFPRRITKTATDLIKKLCRDNPTERLG  665 (732)
T ss_pred             -chHHHHHHH------------Hhhh-----hhhhcccccchhHHHHHHHHHhcCcHhhhc
Confidence             232211111            1111     112233455556788999999999999975

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.75  E-value=1.3e-18  Score=117.84  Aligned_cols=124  Identities=23%  Similarity=0.288  Sum_probs=85.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.+.......   ......++..|++|| +.....++.++|+||+|+++|++++|..||....
T Consensus       128 ~~nil~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~y~~PE-~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~  203 (258)
T cd05578         128 PDNILLDEQGHVHITDFNIATKVTPDT---LTTSTSGTPGYMAPE-VLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHS  203 (258)
T ss_pred             HHHeEEcCCCCEEEeecccccccCCCc---cccccCCChhhcCHH-HHcccCCCCcccchhhHHHHHHHHhCCCCCCCCC
Confidence            579999999999999999987652211   223345778899995 4445557889999999999999999999987543


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCH--HHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINA--KEIV  146 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~--~~vl  146 (164)
                      ...  .....         .....       .....+...+..+.+++.+||+.||.+||++  ++++
T Consensus       204 ~~~--~~~~~---------~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~  253 (258)
T cd05578         204 RTI--RDQIR---------AKQET-------ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK  253 (258)
T ss_pred             ccH--HHHHH---------HHhcc-------ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence            211  00000         00000       1111223345678999999999999999999  6554

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.75  E-value=1.2e-18  Score=119.68  Aligned_cols=134  Identities=19%  Similarity=0.221  Sum_probs=88.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccC-cccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREG-RVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |.||+++.++.++|+|||+++.+..... .......++..|++||.+.... ..+.++|+||+|+++|++++|..||...
T Consensus       133 p~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~  211 (288)
T cd05583         133 LENILLDSEGHVVLTDFGLSKEFLAEEE-ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVD  211 (288)
T ss_pred             HHHeEECCCCCEEEEECccccccccccc-cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccC
Confidence            5799999999999999999876532211 1112234788999996543322 2677899999999999999999998532


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI  152 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~  152 (164)
                      ..... ......        ....    ..    ...+..++..+.+++.+||+.||++|||++++.+.|...
T Consensus       212 ~~~~~-~~~~~~--------~~~~----~~----~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~  267 (288)
T cd05583         212 GEQNS-QSEISR--------RILK----SK----PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP  267 (288)
T ss_pred             cccch-HHHHHH--------HHHc----cC----CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence            11110 110000        0000    00    111223445688999999999999999988887766543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.75  E-value=5.4e-18  Score=115.26  Aligned_cols=130  Identities=24%  Similarity=0.327  Sum_probs=86.0

Q ss_pred             CcceEecCCc-eEEEeccccceeccCCCCc--cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCC
Q 039452            1 PSNVLLDDNM-VAHLSDFGIAKLLIGEDQS--MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         1 p~Nill~~~~-~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      |+||+++.++ .++|+|||.+..+......  .......++..|++||.+ ....++.++|+||+|++++++++|..||.
T Consensus       131 ~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~-~~~~~~~~~Dv~slG~~l~~l~~g~~p~~  209 (268)
T cd06630         131 GANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVL-RGEQYGRSCDVWSVGCVIIEMATAKPPWN  209 (268)
T ss_pred             HHHEEEcCCCCEEEEcccccccccccccccCCccccccccccceeCHhHh-ccCCCCcccchHHHHHHHHHHHhCCCCCC
Confidence            5799998765 6999999998765321111  111234578899999554 45567889999999999999999999986


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .......  ...+.        ...      ........+...+..+.+++.+||..+|++|||+.++++
T Consensus       210 ~~~~~~~--~~~~~--------~~~------~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~  263 (268)
T cd06630         210 AEKHSNH--LALIF--------KIA------SATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK  263 (268)
T ss_pred             CCCCcch--HHHHH--------HHh------ccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence            3221110  00000        000      000111123345566889999999999999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.75  E-value=1.7e-18  Score=117.35  Aligned_cols=129  Identities=23%  Similarity=0.345  Sum_probs=84.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCC------ccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQ------SMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKK   74 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~------~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~   74 (164)
                      |+||+++.++.++|+|||++........      ........++..|++||.. .....+.++|+||+|++++++++|..
T Consensus       121 ~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~-~~~~~~~~~Dv~slG~~~~~l~~g~~  199 (265)
T cd05579         121 PDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVI-LGQGHSKTVDWWSLGCILYEFLVGIP  199 (265)
T ss_pred             HHHeEEcCCCCEEEEecccchhcccCcccccccccccccCcccCccccCHHHh-cCCCCCcchhhHHHHHHHHHHHhCCC
Confidence            5799999999999999998875421111      1122334567889999554 44457889999999999999999999


Q ss_pred             CCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHH
Q 039452           75 PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTEL  149 (164)
Q Consensus        75 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l  149 (164)
                      ||.......     ...        .... .   .  .........+..+.+++.+||+.+|++|||+..+.+.|
T Consensus       200 p~~~~~~~~-----~~~--------~~~~-~---~--~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l  255 (265)
T cd05579         200 PFHGETPEE-----IFQ--------NILN-G---K--IEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIK  255 (265)
T ss_pred             CCCCCCHHH-----HHH--------HHhc-C---C--cCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence            986432110     000        0000 0   0  00000011256689999999999999999995544433

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.75  E-value=5.1e-18  Score=114.97  Aligned_cols=123  Identities=20%  Similarity=0.292  Sum_probs=83.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++. +.++|+|||.+.......  .......++..|++||. .....++.++|+||+|+++|++++|..||....
T Consensus       134 ~~nili~~-~~~~l~d~g~~~~~~~~~--~~~~~~~~~~~~~~pe~-~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~  209 (260)
T cd08222         134 AKNIFLKN-NLLKIGDFGVSRLLMGSC--DLATTFTGTPYYMSPEA-LKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN  209 (260)
T ss_pred             hhheEeec-CCEeecccCceeecCCCc--ccccCCCCCcCccCHHH-HccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc
Confidence            57999975 569999999987653221  12223457788999954 445557788999999999999999999985321


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .    . ....        .... .      .....+..++..+.+++.+||+.+|++||++.++++
T Consensus       210 ~----~-~~~~--------~~~~-~------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  256 (260)
T cd08222         210 F----L-SVVL--------RIVE-G------PTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR  256 (260)
T ss_pred             H----H-HHHH--------HHHc-C------CCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence            1    0 0000        0000 0      001112344566889999999999999999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.75  E-value=6.9e-19  Score=124.56  Aligned_cols=128  Identities=24%  Similarity=0.292  Sum_probs=80.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc---------------------------------cccccccccccccCchhh
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS---------------------------------MTQTQTLATIGYMAPVEY   47 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~~pe~~   47 (164)
                      |+|||++.++.++|+|||++..+......                                 .......|++.|+|||. 
T Consensus       129 p~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~-  207 (360)
T cd05627         129 PDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEV-  207 (360)
T ss_pred             HHHEEECCCCCEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHH-
Confidence            68999999999999999998654211000                                 00113468999999954 


Q ss_pred             hccCcccCccchHhHHHHHHHHHhcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHH
Q 039452           48 GREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNL  127 (164)
Q Consensus        48 ~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  127 (164)
                      .....++.++|+||+||++|+|++|..||........             ...+....    .....+....++..+.++
T Consensus       208 ~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~-------------~~~i~~~~----~~~~~p~~~~~s~~~~~l  270 (360)
T cd05627         208 FMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQET-------------YRKVMNWK----ETLVFPPEVPISEKAKDL  270 (360)
T ss_pred             HcCCCCCCcceeccccceeeecccCCCCCCCCCHHHH-------------HHHHHcCC----CceecCCCCCCCHHHHHH
Confidence            4456688899999999999999999999964322110             00111100    000000011234557788


Q ss_pred             HhhccccCccCCCC---HHHHHH
Q 039452          128 AMECTIESPERRIN---AKEIVT  147 (164)
Q Consensus       128 ~~~cl~~~p~~Rps---~~~vl~  147 (164)
                      +.+++ .||.+|++   +.++++
T Consensus       271 i~~l~-~~p~~R~~~~~~~ei~~  292 (360)
T cd05627         271 ILRFC-TDSENRIGSNGVEEIKS  292 (360)
T ss_pred             HHHhc-cChhhcCCCCCHHHHhc
Confidence            88866 49999985   555554

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.74  E-value=1.4e-17  Score=116.86  Aligned_cols=155  Identities=19%  Similarity=0.227  Sum_probs=98.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCccc-----CccchHhHHHHHHHHHhcCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVS-----TNGDVYSFGIMLMEAFTRKKP   75 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~-----~~~Di~s~g~~~~~~~~g~~p   75 (164)
                      +.||||..++++.|+|||+|..+............+||..|||||.+-....+.     .+.||||+|.++||++++..-
T Consensus       344 SkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~  423 (534)
T KOG3653|consen  344 SKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTD  423 (534)
T ss_pred             ccceEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhccc
Confidence            479999999999999999998875444444444588999999996553222222     469999999999999987654


Q ss_pred             CCc--cccCchhHHHHHHHhhh-hhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHH
Q 039452           76 TDE--MFSGEMTLKRWINDLLS-VSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI  152 (164)
Q Consensus        76 ~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~  152 (164)
                      +..  .......+...+...+. +.+.+.+-..+.....+..-........+.+.+.-||..||+-|.|+.=+.+-+.++
T Consensus       424 ~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l  503 (534)
T KOG3653|consen  424 ADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAEL  503 (534)
T ss_pred             ccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHH
Confidence            421  11112233323322221 223333222222221111111123344578899999999999999998887777766


Q ss_pred             HHH
Q 039452          153 RDS  155 (164)
Q Consensus       153 ~~~  155 (164)
                      ...
T Consensus       504 ~~~  506 (534)
T KOG3653|consen  504 MML  506 (534)
T ss_pred             hcc
Confidence            543

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.74  E-value=4.1e-18  Score=131.22  Aligned_cols=90  Identities=18%  Similarity=0.235  Sum_probs=58.7

Q ss_pred             ccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhh
Q 039452           35 TLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHF  114 (164)
Q Consensus        35 ~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  114 (164)
                      ..+|+.|+|||.+ ....++.++|||||||++|||+++..|+....       ..+.        .+ ....... ..  
T Consensus       175 ~~gt~~Y~APE~~-~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~-------~~~~--------~~-~~~~~~~-~~--  234 (793)
T PLN00181        175 AMEMSWYTSPEED-NGSSSNCASDVYRLGVLLFELFCPVSSREEKS-------RTMS--------SL-RHRVLPP-QI--  234 (793)
T ss_pred             cCCCcceEChhhh-ccCCCCchhhhhhHHHHHHHHhhCCCchhhHH-------HHHH--------HH-HHhhcCh-hh--
Confidence            3578889999554 45567899999999999999999887754210       0000        00 0000000 00  


Q ss_pred             hhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452          115 AAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus       115 ~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                         ....+....++.+||+.+|.+|||+.++++
T Consensus       235 ---~~~~~~~~~~~~~~L~~~P~~Rps~~eil~  264 (793)
T PLN00181        235 ---LLNWPKEASFCLWLLHPEPSCRPSMSELLQ  264 (793)
T ss_pred             ---hhcCHHHHHHHHHhCCCChhhCcChHHHhh
Confidence               001223567888999999999999999975

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.74  E-value=6e-18  Score=113.90  Aligned_cols=120  Identities=23%  Similarity=0.287  Sum_probs=83.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.+.......  .......++..|++||.. .....+.++|+|++|+++|++++|..||....
T Consensus       121 p~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~~~~Pe~~-~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~  197 (250)
T cd05123         121 PENILLDADGHIKLTDFGLAKELSSEG--SRTNTFCGTPEYLAPEVL-LGKGYGKAVDWWSLGVLLYEMLTGKPPFYAED  197 (250)
T ss_pred             cceEEEcCCCcEEEeecCcceecccCC--CcccCCcCCccccChHHh-CCCCCCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence            689999999999999999987652221  122344577889999544 44557788999999999999999999986421


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKE  144 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~  144 (164)
                      .  ...           ......        .....+...+..+.+++.+||..||+.|||+++
T Consensus       198 ~--~~~-----------~~~~~~--------~~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~  240 (250)
T cd05123         198 R--KEI-----------YEKILK--------DPLRFPEFLSPEARDLISGLLQKDPTKRLGSGG  240 (250)
T ss_pred             H--HHH-----------HHHHhc--------CCCCCCCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence            1  000           000110        011122223556889999999999999999943

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.74  E-value=3.5e-18  Score=116.73  Aligned_cols=125  Identities=21%  Similarity=0.366  Sum_probs=85.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc------------------cccccccccccccCchhhhccCcccCccchHhH
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS------------------MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF   62 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~   62 (164)
                      |+||+++.++.++++|||.+.........                  .......++..|++|| .......+.++|+||+
T Consensus       130 ~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe-~~~~~~~~~~~Di~sl  208 (280)
T cd05581         130 PENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPE-LLNEKPAGKSSDLWAL  208 (280)
T ss_pred             HHHeEECCCCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHH-HhCCCCCChhhhHHHH
Confidence            57999999999999999998765321110                  1122345678899995 4445557889999999


Q ss_pred             HHHHHHHHhcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCH
Q 039452           63 GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINA  142 (164)
Q Consensus        63 g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  142 (164)
                      |++++++++|..||..... ...+.            ....        .....+...+..+.+++.+||+.+|++|||+
T Consensus       209 G~~l~~l~~g~~p~~~~~~-~~~~~------------~~~~--------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~  267 (280)
T cd05581         209 GCIIYQMLTGKPPFRGSNE-YLTFQ------------KILK--------LEYSFPPNFPPDAKDLIEKLLVLDPQDRLGV  267 (280)
T ss_pred             HHHHHHHHhCCCCCCCccH-HHHHH------------HHHh--------cCCCCCCccCHHHHHHHHHHhcCCHhhCCCc
Confidence            9999999999999874321 00000            0000        0001112335558899999999999999999


Q ss_pred             ----HHHHH
Q 039452          143 ----KEIVT  147 (164)
Q Consensus       143 ----~~vl~  147 (164)
                          ++++.
T Consensus       268 ~~~~~~ll~  276 (280)
T cd05581         268 NEGYDELKA  276 (280)
T ss_pred             ccCHHHHhc
Confidence                77664

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.73  E-value=3.8e-18  Score=112.98  Aligned_cols=144  Identities=23%  Similarity=0.293  Sum_probs=97.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |.|.|++++-.+||+|||+++... ......-+..+-|.+|++||.++....++.+.||||.||++.|++.+++.|....
T Consensus       184 PGNLLVNSNCvLKICDFGLARvee-~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~  262 (449)
T KOG0664|consen  184 PGNLLVNSNCILKICDFGLARTWD-QRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAG  262 (449)
T ss_pred             CccEEeccCceEEecccccccccc-hhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccC
Confidence            679999999999999999998742 2222334456678899999888888889999999999999999999999887433


Q ss_pred             cCchhHHHHHHHhhhhhhHHHh------------hhhcccc---cchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVV------------DANLLTR---EDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEI  145 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~---~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v  145 (164)
                        .....+.+-+.++.+..+..            +......   .-+....+..-..+...++.+++..||++|.+..+.
T Consensus       263 --PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A  340 (449)
T KOG0664|consen  263 --PIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEA  340 (449)
T ss_pred             --hHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhh
Confidence              23333344444433322222            1111100   001111222334456778889999999999998776


Q ss_pred             HH
Q 039452          146 VT  147 (164)
Q Consensus       146 l~  147 (164)
                      +.
T Consensus       341 ~~  342 (449)
T KOG0664|consen  341 LQ  342 (449)
T ss_pred             cc
Confidence            54

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.73  E-value=5e-18  Score=118.04  Aligned_cols=115  Identities=23%  Similarity=0.312  Sum_probs=83.9

Q ss_pred             cceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcccc
Q 039452            2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMFS   81 (164)
Q Consensus         2 ~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~~   81 (164)
                      .||+++..|++||+|||++..-.  -.........||+.|+|| +++...+++..+|.||||+++|||+.|++||++...
T Consensus       479 DNvmLd~eGHiKi~DFGmcKEni--~~~~TTkTFCGTPdYiAP-EIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE  555 (683)
T KOG0696|consen  479 DNVMLDSEGHIKIADFGMCKENI--FDGVTTKTFCGTPDYIAP-EIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE  555 (683)
T ss_pred             cceEeccCCceEeeecccccccc--cCCcceeeecCCCccccc-ceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCH
Confidence            59999999999999999987531  122233457799999999 777788899999999999999999999999985322


Q ss_pred             CchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCC
Q 039452           82 GEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRI  140 (164)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp  140 (164)
                      .+  +-+.+                   ......-|..++.++.++.+..|...|.+|.
T Consensus       556 ~e--lF~aI-------------------~ehnvsyPKslSkEAv~ickg~ltK~P~kRL  593 (683)
T KOG0696|consen  556 DE--LFQAI-------------------MEHNVSYPKSLSKEAVAICKGLLTKHPGKRL  593 (683)
T ss_pred             HH--HHHHH-------------------HHccCcCcccccHHHHHHHHHHhhcCCcccc
Confidence            11  11111                   1111223445566677888888888888885

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.73  E-value=9.4e-18  Score=113.99  Aligned_cols=126  Identities=18%  Similarity=0.168  Sum_probs=85.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc-cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS-MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+||+++.++.++|+|||.++........ .......++..|++||.+ ....++.++|+||+|++++++++|..||...
T Consensus       134 p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  212 (264)
T cd06653         134 GANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVI-SGEGYGRKADVWSVACTVVEMLTEKPPWAEY  212 (264)
T ss_pred             HHHEEEcCCCCEEECccccccccccccccCccccccCCcccccCHhhh-cCCCCCccccHHHHHHHHHHHHhCCCCCCcc
Confidence            57999999999999999998765221111 111234578899999544 4455788999999999999999999998642


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ....                .+.+...   .......+......+.+++.+||. +|..|||+.+++.
T Consensus       213 ~~~~----------------~~~~~~~---~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~  260 (264)
T cd06653         213 EAMA----------------AIFKIAT---QPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR  260 (264)
T ss_pred             CHHH----------------HHHHHHc---CCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence            1110                0111000   001111234456668999999999 5799999998765

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.73  E-value=5.3e-18  Score=116.65  Aligned_cols=129  Identities=24%  Similarity=0.304  Sum_probs=84.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhcc-CcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGRE-GRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+||+++.++.++|+|||++....... ........++..|++||.+... ...+.++|+||+|+++|++++|..||...
T Consensus       133 p~nil~~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~  211 (290)
T cd05613         133 LENILLDSNGHVVLTDFGLSKEFHEDE-VERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVD  211 (290)
T ss_pred             HHHeEECCCCCEEEeeCccceeccccc-ccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcC
Confidence            679999999999999999987652211 1112234578899999665432 23667899999999999999999998632


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCC-----CHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRI-----NAKEIVT  147 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~vl~  147 (164)
                      ..... ..            ++........    ...+..++..+.+++.+||+.||++||     ++++++.
T Consensus       212 ~~~~~-~~------------~~~~~~~~~~----~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~  267 (290)
T cd05613         212 GEKNS-QA------------EISRRILKSE----PPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK  267 (290)
T ss_pred             Ccccc-HH------------HHHHHhhccC----CCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence            11111 11            1111000000    011223455688999999999999997     6666665

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.73  E-value=4.6e-18  Score=113.90  Aligned_cols=112  Identities=22%  Similarity=0.235  Sum_probs=78.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++++|||.+..+...     .....++..|++|| .......+.++|+||+|+++|++++|..|+....
T Consensus       113 p~Nil~~~~~~~~l~df~~~~~~~~~-----~~~~~~~~~y~aPE-~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~  186 (237)
T cd05576         113 PNNILLDDRGHIQLTYFSRWSEVEDS-----CDGEAVENMYCAPE-VGGISEETEACDWWSLGAILFELLTGKTLVECHP  186 (237)
T ss_pred             HHHEEEcCCCCEEEecccchhccccc-----cccCCcCccccCCc-ccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCc
Confidence            68999999999999999987654211     11233466799995 4445557788999999999999999998764211


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAK  143 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~  143 (164)
                      ..                   ...      ......+..++..+.+++.+||+.||++||++.
T Consensus       187 ~~-------------------~~~------~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~  224 (237)
T cd05576         187 SG-------------------INT------HTTLNIPEWVSEEARSLLQQLLQFNPTERLGAG  224 (237)
T ss_pred             hh-------------------ccc------ccccCCcccCCHHHHHHHHHHccCCHHHhcCCC
Confidence            00                   000      000011233455688999999999999999973

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.72  E-value=1.4e-17  Score=127.57  Aligned_cols=128  Identities=21%  Similarity=0.261  Sum_probs=85.4

Q ss_pred             CcceEecCCceEEEeccccceecc----------------CCCCccccccccccccccCchhhhccC--cccCccchHhH
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLI----------------GEDQSMTQTQTLATIGYMAPVEYGREG--RVSTNGDVYSF   62 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~----------------~~~~~~~~~~~~~~~~~~~pe~~~~~~--~~~~~~Di~s~   62 (164)
                      |.||+++.++.|||+|||++....                .+......+..+||..|.|||......  .++.++|+||+
T Consensus       725 P~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSL  804 (1351)
T KOG1035|consen  725 PRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSL  804 (1351)
T ss_pred             cceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHH
Confidence            789999999999999999987621                011112345678999999996665544  58999999999


Q ss_pred             HHHHHHHHhcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCH
Q 039452           63 GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINA  142 (164)
Q Consensus        63 g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  142 (164)
                      |++++||+..   |..    .|.....+.         -++....+..   ........+.-.+++..+++.||++||||
T Consensus       805 GIVlFEM~yP---F~T----sMERa~iL~---------~LR~g~iP~~---~~f~~~~~~~e~slI~~Ll~hdP~kRPtA  865 (1351)
T KOG1035|consen  805 GIVLFEMLYP---FGT----SMERASILT---------NLRKGSIPEP---ADFFDPEHPEEASLIRWLLSHDPSKRPTA  865 (1351)
T ss_pred             HHHHHHHhcc---CCc----hHHHHHHHH---------hcccCCCCCC---cccccccchHHHHHHHHHhcCCCccCCCH
Confidence            9999999843   432    122222111         1222222111   11111223335689999999999999999


Q ss_pred             HHHHH
Q 039452          143 KEIVT  147 (164)
Q Consensus       143 ~~vl~  147 (164)
                      .++|.
T Consensus       866 ~eLL~  870 (1351)
T KOG1035|consen  866 TELLN  870 (1351)
T ss_pred             HHHhh
Confidence            99986

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.72  E-value=4.3e-18  Score=126.66  Aligned_cols=126  Identities=20%  Similarity=0.301  Sum_probs=96.6

Q ss_pred             cceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccC----cccCccchHhHHHHHHHHHhcCCCCC
Q 039452            2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREG----RVSTNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         2 ~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~----~~~~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      .|||++.++.||+.|||.+..+  ..........+||+.|||||++....    .++.++|+||+|++-.||..|.+|+.
T Consensus       152 ~NiLLT~e~~VKLvDFGvSaQl--dsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~  229 (953)
T KOG0587|consen  152 QNVLLTENAEVKLVDFGVSAQL--DSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLC  229 (953)
T ss_pred             ceEEEeccCcEEEeeeeeeeee--ecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCcc
Confidence            5999999999999999999887  33333445678999999997665433    36788999999999999999999998


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ++.+....+.                  +....++....+......+.+++..||..|-..||++.++++
T Consensus       230 DmHPmraLF~------------------IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~  281 (953)
T KOG0587|consen  230 DMHPMRALFL------------------IPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK  281 (953)
T ss_pred             Ccchhhhhcc------------------CCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence            7654332111                  011122233346788889999999999999999999998875

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.72  E-value=9.9e-18  Score=117.45  Aligned_cols=130  Identities=18%  Similarity=0.203  Sum_probs=82.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhcc----CcccCccchHhHHHHHHHHHhcCCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGRE----GRVSTNGDVYSFGIMLMEAFTRKKPT   76 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~----~~~~~~~Di~s~g~~~~~~~~g~~p~   76 (164)
                      |+|||++.++.+||+|||++..+.... ........|+..|+|||.+...    ..++.++|+||+|+++|+|++|..||
T Consensus       130 p~Nill~~~~~~kl~DfG~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf  208 (331)
T cd05624         130 PDNVLLDMNGHIRLADFGSCLKMNQDG-TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF  208 (331)
T ss_pred             hHHEEEcCCCCEEEEeccceeeccCCC-ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCc
Confidence            689999999999999999987652211 1122234689999999655421    34678899999999999999999999


Q ss_pred             CccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccC--CCCHHHHHH
Q 039452           77 DEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPER--RINAKEIVT  147 (164)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rps~~~vl~  147 (164)
                      .......     .        ...+.....   ..........++..+.+++.+|+..++.+  |++++++++
T Consensus       209 ~~~~~~~-----~--------~~~i~~~~~---~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~  265 (331)
T cd05624         209 YAESLVE-----T--------YGKIMNHEE---RFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKK  265 (331)
T ss_pred             cCCCHHH-----H--------HHHHHcCCC---cccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence            6421110     0        001111000   00000011224566888999998865544  457877765

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.72  E-value=3.9e-18  Score=121.22  Aligned_cols=140  Identities=22%  Similarity=0.213  Sum_probs=92.8

Q ss_pred             CcceEecC-CceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDD-NMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |.|||++. ...+||||||.|....    ....+.+.-+..|.|| +++.+..++...|+||.||.+||+.+|++.|.+.
T Consensus       564 PDNiLVNE~k~iLKLCDfGSA~~~~----eneitPYLVSRFYRaP-EIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~  638 (752)
T KOG0670|consen  564 PDNILVNESKNILKLCDFGSASFAS----ENEITPYLVSRFYRAP-EIILGLPYDYPIDTWSVGCTLYELYTGKILFPGR  638 (752)
T ss_pred             ccceEeccCcceeeeccCccccccc----cccccHHHHHHhccCc-ceeecCcccCCccceeeceeeEEeeccceecCCC
Confidence            78999985 4678999999997652    1223445567789999 6666778999999999999999999999999876


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccc-----------------------------------------cchhhhhHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTR-----------------------------------------EDRHFAAKQ  118 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------------~~~~~~~~~  118 (164)
                      ....|...-+  ...+.-+..++++.....                                         .+.......
T Consensus       639 TNN~MLrl~m--e~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~  716 (752)
T KOG0670|consen  639 TNNQMLRLFM--ELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQP  716 (752)
T ss_pred             CcHHHHHHHH--HhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhH
Confidence            5555422111  000000111222111000                                         000111223


Q ss_pred             HHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452          119 QCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus       119 ~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .....+.+|+.+||..||++|.|..+.|.
T Consensus       717 ~~~~~~rdLLdkml~LdP~KRit~nqAL~  745 (752)
T KOG0670|consen  717 KIVQQLRDLLDKMLILDPEKRITVNQALK  745 (752)
T ss_pred             HHHHHHHHHHHHHhccChhhcCCHHHHhc
Confidence            45566899999999999999999998775

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.72  E-value=2.4e-17  Score=110.12  Aligned_cols=126  Identities=25%  Similarity=0.307  Sum_probs=86.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |.||+++.++.++++|||.+.......   ......++..|++||.. ....++.++|+|++|++++++++|..||....
T Consensus       115 ~~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~~pE~~-~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~  190 (244)
T smart00220      115 PENILLDEDGHVKLADFGLARQLDPGG---LLTTFVGTPEYMAPEVL-LGKGYGKAVDVWSLGVILYELLTGKPPFPGDD  190 (244)
T ss_pred             HHHeEECCCCcEEEccccceeeecccc---ccccccCCcCCCCHHHH-ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            579999999999999999987752211   22345577889999544 45557789999999999999999999986421


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ... .            ..+.........    ......++..+.+++.+||..+|++||++.++++
T Consensus       191 ~~~-~------------~~~~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      191 QLL-E------------LFKKIGKPKPPF----PPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             cHH-H------------HHHHHhccCCCC----ccccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence            111 0            011111110000    0000014456889999999999999999999986

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.72  E-value=2e-17  Score=103.42  Aligned_cols=143  Identities=21%  Similarity=0.176  Sum_probs=91.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |.|.||+.+|.+|++|||+++.+  +......+..+-|.+|++|..+....-+++..|+||.||++.|+.. |.+.|.+.
T Consensus       129 pqnllin~ngelkladfglaraf--gipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~  206 (292)
T KOG0662|consen  129 PQNLLINRNGELKLADFGLARAF--GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN  206 (292)
T ss_pred             cceEEeccCCcEEecccchhhhc--CCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCC
Confidence            78999999999999999999987  3333334556778899999666655568999999999999999997 44545432


Q ss_pred             ccCchhHHHHHHHhhhhh----hHHHh---hhhcccccc---hhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVS----VMEVV---DANLLTRED---RHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~----~~~~~---~~~~~~~~~---~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                       ....++..... .....    .+.+-   +...++..+   .-.+.-+.+...-++++.+.+.-+|.+|.+++..++
T Consensus       207 -dvddqlkrif~-~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq  282 (292)
T KOG0662|consen  207 -DVDDQLKRIFR-LLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ  282 (292)
T ss_pred             -cHHHHHHHHHH-HhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence             22222222211 11111    11111   111111111   112222345556788999999999999999998765

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.71  E-value=7.4e-18  Score=107.22  Aligned_cols=84  Identities=30%  Similarity=0.448  Sum_probs=65.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhh---ccCcccCccchHhHHHHHHHHHhcCCCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYG---REGRVSTNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~---~~~~~~~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      |+||||+.+|.+|++|||.+..+.+   ....+...|...|+|||.+.   +...++.++||||+|+...|+.+++.||.
T Consensus       177 PsNiLIn~~GqVKiCDFGIsG~L~d---SiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~  253 (282)
T KOG0984|consen  177 PSNILINYDGQVKICDFGISGYLVD---SIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYE  253 (282)
T ss_pred             cceEEEccCCcEEEcccccceeehh---hhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccc
Confidence            7999999999999999999988632   22333356888999997653   23358889999999999999999999998


Q ss_pred             ccccCchhHH
Q 039452           78 EMFSGEMTLK   87 (164)
Q Consensus        78 ~~~~~~~~~~   87 (164)
                      ...+...++.
T Consensus       254 ~w~tpF~qLk  263 (282)
T KOG0984|consen  254 SWGTPFQQLK  263 (282)
T ss_pred             ccCCHHHHHH
Confidence            6555444443

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.71  E-value=2.7e-17  Score=113.76  Aligned_cols=93  Identities=26%  Similarity=0.369  Sum_probs=67.5

Q ss_pred             ccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhh
Q 039452           35 TLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHF  114 (164)
Q Consensus        35 ~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  114 (164)
                      .+||..|+|| |++.+..++.++|.|+|||++|||+.|..||.+......             +.+++.+..      ..
T Consensus       295 FVGThEYlAP-EvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~T-------------l~NIv~~~l------~F  354 (459)
T KOG0610|consen  295 FVGTHEYLAP-EVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKET-------------LRNIVGQPL------KF  354 (459)
T ss_pred             cccccccccc-eeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhh-------------HHHHhcCCC------cC
Confidence            5789999999 566677789999999999999999999999986433222             222222221      11


Q ss_pred             hhHHHHHHHHHHHHhhccccCccCCCC----HHHHHH
Q 039452          115 AAKQQCVSFVFNLAMECTIESPERRIN----AKEIVT  147 (164)
Q Consensus       115 ~~~~~~~~~~~~l~~~cl~~~p~~Rps----~~~vl~  147 (164)
                      +....++..+.+|+++.|..||.+|..    +.+|.+
T Consensus       355 p~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~  391 (459)
T KOG0610|consen  355 PEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKR  391 (459)
T ss_pred             CCCCcchhHHHHHHHHHhccChhhhhccccchHHhhc
Confidence            112245566899999999999999986    555543

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.71  E-value=4.6e-18  Score=119.24  Aligned_cols=130  Identities=22%  Similarity=0.377  Sum_probs=93.0

Q ss_pred             CcceEec---CCceEEEeccccceeccCCCCcc-----ccccccccccccCchhhhcc---CcccCccchHhHHHHHHHH
Q 039452            1 PSNVLLD---DNMVAHLSDFGIAKLLIGEDQSM-----TQTQTLATIGYMAPVEYGRE---GRVSTNGDVYSFGIMLMEA   69 (164)
Q Consensus         1 p~Nill~---~~~~~kl~dfg~~~~~~~~~~~~-----~~~~~~~~~~~~~pe~~~~~---~~~~~~~Di~s~g~~~~~~   69 (164)
                      |.|||+.   ..|.+||.|||++.+|.+.....     ..+...||.+|++||.++-+   ...+.++||||+|+++|.+
T Consensus       598 PgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQC  677 (775)
T KOG1151|consen  598 PGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQC  677 (775)
T ss_pred             CccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhh
Confidence            6899995   45889999999999986443322     22345689999999876544   2377899999999999999


Q ss_pred             HhcCCCCCccccCchhHHHHHHHhhhhhhHHHhhh-hcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHH
Q 039452           70 FTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDA-NLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIV  146 (164)
Q Consensus        70 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl  146 (164)
                      +.|+.||....+..                +++.. .+.......++..+.++.++..++++||.+.-++|...-++.
T Consensus       678 lYGrKPFGhnqsQQ----------------dILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA  739 (775)
T KOG1151|consen  678 LYGRKPFGHNQSQQ----------------DILQENTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLA  739 (775)
T ss_pred             hccCCCCCCchhHH----------------HHHhhhchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence            99999996432222                12211 122233344444556677889999999999999998766554

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.69  E-value=4.3e-17  Score=124.34  Aligned_cols=128  Identities=20%  Similarity=0.289  Sum_probs=89.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhc---c-CcccCccchHhHHHHHHHHHhcCCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGR---E-GRVSTNGDVYSFGIMLMEAFTRKKPT   76 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~---~-~~~~~~~Di~s~g~~~~~~~~g~~p~   76 (164)
                      |.||||+.+|++||+|||.+-.|. ..+.......+|||.|.+||.+..   + +.|+...|.||+|+++|||+.|..||
T Consensus       203 PDNvLld~~GHikLADFGsClkm~-~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPF  281 (1317)
T KOG0612|consen  203 PDNVLLDKSGHIKLADFGSCLKMD-ADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPF  281 (1317)
T ss_pred             cceeEecccCcEeeccchhHHhcC-CCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcc
Confidence            899999999999999999998773 234445567789999999966532   2 45888999999999999999999999


Q ss_pred             CccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCC---HHHHHH
Q 039452           77 DEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRIN---AKEIVT  147 (164)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps---~~~vl~  147 (164)
                      +...-.             +.+..+.+..    ....++....++..+.+|+.+. --+|+.|-.   ++++..
T Consensus       282 Yadslv-------------eTY~KIm~hk----~~l~FP~~~~VSeeakdLI~~l-l~~~e~RLgrngiedik~  337 (1317)
T KOG0612|consen  282 YADSLV-------------ETYGKIMNHK----ESLSFPDETDVSEEAKDLIEAL-LCDREVRLGRNGIEDIKN  337 (1317)
T ss_pred             hHHHHH-------------HHHHHHhchh----hhcCCCcccccCHHHHHHHHHH-hcChhhhcccccHHHHHh
Confidence            742111             1222333221    1111111223677788888875 457778876   766654

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.69  E-value=4.4e-17  Score=110.29  Aligned_cols=123  Identities=19%  Similarity=0.251  Sum_probs=87.7

Q ss_pred             cceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcccc
Q 039452            2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMFS   81 (164)
Q Consensus         2 ~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~~   81 (164)
                      +|.|++++|++||+|||++..-.  ..-.......||+.|+|| +++....+..++|.|.+|++.|||+-|+.||.....
T Consensus       297 ENLlLDkDGHIKitDFGLCKE~I--~~g~t~kTFCGTPEYLAP-EVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh  373 (516)
T KOG0690|consen  297 ENLLLDKDGHIKITDFGLCKEEI--KYGDTTKTFCGTPEYLAP-EVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDH  373 (516)
T ss_pred             hhheeccCCceEeeecccchhcc--cccceeccccCChhhcCc-hhhccccccceeehhhhhHHHHHHHhccCcccccch
Confidence            68999999999999999987531  111223457899999999 666777799999999999999999999999974322


Q ss_pred             CchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCC--HHHHHHH
Q 039452           82 GEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRIN--AKEIVTE  148 (164)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps--~~~vl~~  148 (164)
                      +.              +.+++--.       ...-|..+++++..++...|..||.+|..  .+++.+.
T Consensus       374 ~k--------------LFeLIl~e-------d~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi  421 (516)
T KOG0690|consen  374 EK--------------LFELILME-------DLKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEI  421 (516)
T ss_pred             hH--------------HHHHHHhh-------hccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHH
Confidence            11              11111100       01123455667889999999999999963  3344443

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.68  E-value=8.8e-17  Score=121.70  Aligned_cols=127  Identities=15%  Similarity=0.149  Sum_probs=85.6

Q ss_pred             ceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccccC
Q 039452            3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMFSG   82 (164)
Q Consensus         3 Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~~~   82 (164)
                      |+++...+..++.+||.+...............+||+.|++||.+. +..++.++|||||||++|++++|..||......
T Consensus       508 ~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~vGT~~Y~APE~l~-~~~~~~~~DiwSlG~il~ElltG~~pf~~~~~~  586 (669)
T cd05610         508 NLYQTPKQVKIGTPYRTPKSVRRGAAPVEGERILGTPDYLAPELLL-GKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQ  586 (669)
T ss_pred             ceeECCccccccccCCCchhhhcccccccCCceeeCccccCHHHcC-CCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH
Confidence            5566666667888999887654333333344568999999996654 455889999999999999999999998643211


Q ss_pred             chhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHH
Q 039452           83 EMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTE  148 (164)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  148 (164)
                      .     ..        ..++.....   ..  .....++..+.+++..||..||.+||++.++++.
T Consensus       587 ~-----~~--------~~il~~~~~---~p--~~~~~~~~~~~~~l~~lL~~dP~~R~ta~e~l~h  634 (669)
T cd05610         587 Q-----VF--------QNILNRDIP---WP--EGEEKLSVNAQNAIEILLTMDPTKRAGLKELKQH  634 (669)
T ss_pred             H-----HH--------HHHHhcCCC---CC--cccccCCHHHHHHHHHHcccChhHCcCHHHHHhC
Confidence            1     11        111111100   00  0112345567889999999999999999999874

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.68  E-value=1.7e-16  Score=111.95  Aligned_cols=132  Identities=17%  Similarity=0.140  Sum_probs=87.5

Q ss_pred             CceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc-----cCc
Q 039452            9 NMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF-----SGE   83 (164)
Q Consensus         9 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~-----~~~   83 (164)
                      +..|||+|||-|...     +...+..+.|..|++| +++.+..|++.+||||++|+.+|++||...|+...     .++
T Consensus       390 di~vKIaDlGNACW~-----~khFT~DIQTRQYRap-EVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDE  463 (590)
T KOG1290|consen  390 DIRVKIADLGNACWV-----HKHFTEDIQTRQYRAP-EVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDE  463 (590)
T ss_pred             ceeEEEeeccchhhh-----hhhhchhhhhhhccCc-ceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccH
Confidence            467999999998874     2334567889999999 55556779999999999999999999999887532     233


Q ss_pred             hhHHHHHHHhhhhhhHHHhhhhcccccc-------------hhh----------hhHHHHHHHHHHHHhhccccCccCCC
Q 039452           84 MTLKRWINDLLSVSVMEVVDANLLTRED-------------RHF----------AAKQQCVSFVFNLAMECTIESPERRI  140 (164)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~----------~~~~~~~~~~~~l~~~cl~~~p~~Rp  140 (164)
                      .+++..+.- +..-+..+...+......             ...          ..+......+.+++.-||+.+|++||
T Consensus       464 DHiA~i~EL-LG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~  542 (590)
T KOG1290|consen  464 DHIALIMEL-LGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRP  542 (590)
T ss_pred             HHHHHHHHH-HhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccc
Confidence            444443322 112222222222111100             000          01123345688999999999999999


Q ss_pred             CHHHHHH
Q 039452          141 NAKEIVT  147 (164)
Q Consensus       141 s~~~vl~  147 (164)
                      ||.++++
T Consensus       543 tA~~cl~  549 (590)
T KOG1290|consen  543 TAAQCLK  549 (590)
T ss_pred             cHHHHhc
Confidence            9999984

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.66  E-value=3.3e-17  Score=121.49  Aligned_cols=126  Identities=23%  Similarity=0.409  Sum_probs=83.8

Q ss_pred             CcceEecC---C--ceEEEeccccceeccCCCCcc-ccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhc-C
Q 039452            1 PSNVLLDD---N--MVAHLSDFGIAKLLIGEDQSM-TQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTR-K   73 (164)
Q Consensus         1 p~Nill~~---~--~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g-~   73 (164)
                      |.||||+.   +  .+++|+|||++..+....... .....-||.+|.|||.+.. ..-..++||+|+||++|.+++| .
T Consensus       634 PQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~-~~~~~avDiFslGCvfyYvltgG~  712 (903)
T KOG1027|consen  634 PQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLRE-DRKTQAVDIFSLGCVFYYVLTGGS  712 (903)
T ss_pred             CceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhc-cccCcccchhhcCceEEEEecCCc
Confidence            78999975   2  578999999999875333322 2344568999999965544 4445689999999999998875 8


Q ss_pred             CCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           74 KPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        74 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .||......+.               +++.....   .........+  ++.+|+.+|+..+|..||+|.+|+.
T Consensus       713 HpFGd~~~R~~---------------NIl~~~~~---L~~L~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~  766 (903)
T KOG1027|consen  713 HPFGDSLERQA---------------NILTGNYT---LVHLEPLPDC--EAKDLISRMLNPDPQLRPSATDVLN  766 (903)
T ss_pred             cCCCchHHhhh---------------hhhcCccc---eeeeccCchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence            89864211110               11111000   0000000111  5889999999999999999999974

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.64  E-value=1.4e-15  Score=98.56  Aligned_cols=144  Identities=18%  Similarity=0.172  Sum_probs=102.3

Q ss_pred             CcceEecC-CceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDD-NMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |.|++|+. .-.++|.|+|+|.+.....   .....+.+..|..||.+.....++...|+|||||++..|+..+-||..-
T Consensus       160 PhNvmIdh~~rkLrlIDWGLAEFYHp~~---eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG  236 (338)
T KOG0668|consen  160 PHNVMIDHELRKLRLIDWGLAEFYHPGK---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHG  236 (338)
T ss_pred             cceeeechhhceeeeeecchHhhcCCCc---eeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCC
Confidence            78999984 5578999999998752222   2233467788889988888888999999999999999999999998765


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhccccc--------------chhhhh---HHHHHHHHHHHHhhccccCccCCCCH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTRE--------------DRHFAA---KQQCVSFVFNLAMECTIESPERRINA  142 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~---~~~~~~~~~~l~~~cl~~~p~~Rps~  142 (164)
                      .....++.....-.....+...+++....-.              ...+..   ....++++.+++.+.|++|-.+|+|+
T Consensus       237 ~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTa  316 (338)
T KOG0668|consen  237 HDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTA  316 (338)
T ss_pred             CCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccch
Confidence            5666666555444444445554444322111              111110   11235779999999999999999999


Q ss_pred             HHHHH
Q 039452          143 KEIVT  147 (164)
Q Consensus       143 ~~vl~  147 (164)
                      ++.+.
T Consensus       317 kEam~  321 (338)
T KOG0668|consen  317 KEAMA  321 (338)
T ss_pred             HHHhc
Confidence            98875

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.62  E-value=1.7e-16  Score=114.35  Aligned_cols=122  Identities=20%  Similarity=0.272  Sum_probs=90.8

Q ss_pred             cceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcccc
Q 039452            2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMFS   81 (164)
Q Consensus         2 ~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~~   81 (164)
                      +|||++.+..+||+|||++-.+.   .........|++.|.|||.........+.+|+|++|+++|.++.|..||++..-
T Consensus       184 eNilL~~~mnikIaDfgfS~~~~---~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~l  260 (596)
T KOG0586|consen  184 ENILLDENMNIKIADFGFSTFFD---YGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNL  260 (596)
T ss_pred             hhcccccccceeeeccccceeec---ccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccc
Confidence            69999999999999999998762   222345578999999996666555677899999999999999999999985211


Q ss_pred             CchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           82 GEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                                       ..+..+.+    ......+..++.++.++++++|-.+|.+|++++++.+
T Consensus       261 -----------------k~Lr~rvl----~gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~  305 (596)
T KOG0586|consen  261 -----------------KELRPRVL----RGKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMK  305 (596)
T ss_pred             -----------------ccccchhe----eeeecccceeechhHHHHHHhhccCccccCCHHHhhh
Confidence                             11111111    1112234445566889999999999999999998875

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.59  E-value=4.6e-15  Score=108.36  Aligned_cols=138  Identities=16%  Similarity=0.192  Sum_probs=82.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCc---------------------ccCccch
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGR---------------------VSTNGDV   59 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~---------------------~~~~~Di   59 (164)
                      |+|||++.++.+||+|||+++.+.... ........+++.|++||++.....                     .....|+
T Consensus       337 p~NILl~~~~~~kL~DFGla~~~~~~~-~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~Dv  415 (507)
T PLN03224        337 PENLLVTVDGQVKIIDFGAAVDMCTGI-NFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDS  415 (507)
T ss_pred             hHhEEECCCCcEEEEeCcCccccccCC-ccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccch
Confidence            689999999999999999987652211 111122344789999977643211                     1124699


Q ss_pred             HhHHHHHHHHHhcCC-CCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCc--
Q 039452           60 YSFGIMLMEAFTRKK-PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESP--  136 (164)
Q Consensus        60 ~s~g~~~~~~~~g~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p--  136 (164)
                      ||+||++++|+++.. |+............+..      .....+.  ..............+...++++.++|..+|  
T Consensus       416 wSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~------~~~~~r~--~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~  487 (507)
T PLN03224        416 YTAGVLLMQMCVPELRPVANIRLFNTELRQYDN------DLNRWRM--YKGQKYDFSLLDRNKEAGWDLACKLITKRDQA  487 (507)
T ss_pred             hhHHHHHHHHHhCCCCCccchhhhhhHHhhccc------hHHHHHh--hcccCCCcccccccChHHHHHHHHHhccCCCC
Confidence            999999999999875 65432111111110000      0000000  011111122233456678999999999766  


Q ss_pred             -cCCCCHHHHHH
Q 039452          137 -ERRINAKEIVT  147 (164)
Q Consensus       137 -~~Rps~~~vl~  147 (164)
                       .+|+|++++++
T Consensus       488 ~~~RlSa~eaL~  499 (507)
T PLN03224        488 NRGRLSVGQALS  499 (507)
T ss_pred             cccCCCHHHHhC
Confidence             78999999886

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.59  E-value=1e-15  Score=113.91  Aligned_cols=135  Identities=16%  Similarity=0.131  Sum_probs=95.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc--cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS--MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      ++|+++..+|.+||+|||.+..+.-....  .......|+..|+|||++..........||||.|+++..|.+|+.||..
T Consensus       448 ~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~  527 (601)
T KOG0590|consen  448 LENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKV  527 (601)
T ss_pred             cccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCcccc
Confidence            58999999999999999998775322221  2334567899999997777666666789999999999999999999976


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ....+..+.            ....................++...+.++..+|+.||.+|.|++++++
T Consensus       528 a~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~  584 (601)
T KOG0590|consen  528 AKKSDNSFK------------TNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN  584 (601)
T ss_pred             ccccccchh------------hhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence            544433220            011111111122222233455666889999999999999999999986

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.57  E-value=1.9e-16  Score=113.24  Aligned_cols=123  Identities=19%  Similarity=0.221  Sum_probs=87.1

Q ss_pred             CcceEecCC---ceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCC
Q 039452            1 PSNVLLDDN---MVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         1 p~Nill~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      |+|||+.+.   -.+||+|||++|+..  . ..-....+||+.|+|||+ +....++..-|+||.|+++|-.++|..||.
T Consensus       692 PENVLLas~~~FPQvKlCDFGfARiIg--E-ksFRrsVVGTPAYLaPEV-LrnkGyNrSLDMWSVGVIiYVsLSGTFPFN  767 (888)
T KOG4236|consen  692 PENVLLASASPFPQVKLCDFGFARIIG--E-KSFRRSVVGTPAYLAPEV-LRNKGYNRSLDMWSVGVIIYVSLSGTFPFN  767 (888)
T ss_pred             chheeeccCCCCCceeeccccceeecc--h-hhhhhhhcCCccccCHHH-HhhccccccccceeeeEEEEEEecccccCC
Confidence            789999753   258999999999862  2 222345789999999954 445568889999999999999999999996


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHH
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIV  146 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl  146 (164)
                      ...                   ++.+.......-++......+++.+.+++...|+..-.+|.|....+
T Consensus       768 EdE-------------------dIndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~l  817 (888)
T KOG4236|consen  768 EDE-------------------DINDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSL  817 (888)
T ss_pred             Ccc-------------------chhHHhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhc
Confidence            321                   11111111111122222345667789999999999999999987654

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.55  E-value=9.8e-15  Score=98.75  Aligned_cols=144  Identities=13%  Similarity=0.199  Sum_probs=93.9

Q ss_pred             CcceEecCCc---eEEEeccccceeccCCCC-----ccccccccccccccCchhhh----ccCcccCccchHhHHHHHHH
Q 039452            1 PSNVLLDDNM---VAHLSDFGIAKLLIGEDQ-----SMTQTQTLATIGYMAPVEYG----REGRVSTNGDVYSFGIMLME   68 (164)
Q Consensus         1 p~Nill~~~~---~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~----~~~~~~~~~Di~s~g~~~~~   68 (164)
                      |+|||-.+..   -+||+||.+...+.-...     .......+|+-.|||||++.    ....++.+.|.||+|+++|-
T Consensus       204 PENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYI  283 (463)
T KOG0607|consen  204 PENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYI  283 (463)
T ss_pred             ccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHH
Confidence            7899997544   479999987654321111     11223467888999997652    23347889999999999999


Q ss_pred             HHhcCCCCCccccCchhHHHH-HHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           69 AFTRKKPTDEMFSGEMTLKRW-INDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        69 ~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      |++|.+||.+....+.....- ..+.=...+.+-++.+.+   ..+......++.+..+++...+..|+.+|-++.+++.
T Consensus       284 mLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkY---eFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln  360 (463)
T KOG0607|consen  284 MLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKY---EFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN  360 (463)
T ss_pred             HHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCC---cCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence            999999998754433221110 000001123333333333   2333344567788899999999999999999998876

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.55  E-value=1.8e-14  Score=103.61  Aligned_cols=144  Identities=25%  Similarity=0.317  Sum_probs=93.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhcc--Cc----ccCccchHhHHHHHHHHHhcCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGRE--GR----VSTNGDVYSFGIMLMEAFTRKK   74 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~--~~----~~~~~Di~s~g~~~~~~~~g~~   74 (164)
                      ++|++++..+.+|++|||+.................-...|.+||.+...  ..    .+.+.|+||||++++|+++...
T Consensus        77 s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~  156 (484)
T KOG1023|consen   77 SSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSG  156 (484)
T ss_pred             cccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccC
Confidence            47999999999999999998765321111222223345678999666442  11    4667999999999999999999


Q ss_pred             CCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhh-HHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHH
Q 039452           75 PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAA-KQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIR  153 (164)
Q Consensus        75 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~  153 (164)
                      ||......... .+.+....         ... ....++... ....++++..++..||..+|+.||+++++-..+..+.
T Consensus       157 ~~~~~~~~~~~-~eii~~~~---------~~~-~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~  225 (484)
T KOG1023|consen  157 PFDLRNLVEDP-DEIILRVK---------KGG-SNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTIN  225 (484)
T ss_pred             ccccccccCCh-HHHHHHHH---------hcC-CCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhc
Confidence            99764333322 11111110         100 000111111 1144556899999999999999999999998888776


Q ss_pred             HH
Q 039452          154 DS  155 (164)
Q Consensus       154 ~~  155 (164)
                      ..
T Consensus       226 ~~  227 (484)
T KOG1023|consen  226 KG  227 (484)
T ss_pred             cc
Confidence            53

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.54  E-value=4.3e-15  Score=108.38  Aligned_cols=83  Identities=24%  Similarity=0.345  Sum_probs=63.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCC--------Ccc--------------------------------cccccccccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGED--------QSM--------------------------------TQTQTLATIG   40 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~--------~~~--------------------------------~~~~~~~~~~   40 (164)
                      |.|||||.+|++||.|||++..+....        .+.                                .....+||+-
T Consensus       757 PDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~n  836 (1034)
T KOG0608|consen  757 PDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPN  836 (1034)
T ss_pred             ccceEEccCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCc
Confidence            789999999999999999986542100        000                                0123579999


Q ss_pred             ccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccccCch
Q 039452           41 YMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMFSGEM   84 (164)
Q Consensus        41 ~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~~~~~   84 (164)
                      |+|||++ ....++...|.||.|+++|+|+.|+.||-...+++.
T Consensus       837 yiapevl-~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~t  879 (1034)
T KOG0608|consen  837 YIAPEVL-ARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGET  879 (1034)
T ss_pred             ccChHHh-cccCccccchhhHhhHHHHHHhhCCCCccCCCCCcc
Confidence            9999555 455578889999999999999999999976655554

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.54  E-value=8.4e-15  Score=99.90  Aligned_cols=121  Identities=21%  Similarity=0.311  Sum_probs=82.8

Q ss_pred             cceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcccc
Q 039452            2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMFS   81 (164)
Q Consensus         2 ~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~~   81 (164)
                      .|+|++..|++|+.|+|+++.-.+..  -..+...||+.|.|| +++.+..+...+|.|++|++++||+.|+.||+-...
T Consensus       380 dnvlldaeghikltdygmcke~l~~g--d~tstfcgtpnyiap-eilrgeeygfsvdwwalgvlmfemmagrspfdivgm  456 (593)
T KOG0695|consen  380 DNVLLDAEGHIKLTDYGMCKEGLGPG--DTTSTFCGTPNYIAP-EILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGM  456 (593)
T ss_pred             cceEEccCCceeecccchhhcCCCCC--cccccccCCCcccch-hhhcccccCceehHHHHHHHHHHHHcCCCCcceecC
Confidence            59999999999999999987642222  224457899999999 666677789999999999999999999999975332


Q ss_pred             Cch--hHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCC
Q 039452           82 GEM--TLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRI  140 (164)
Q Consensus        82 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp  140 (164)
                      ...  .-..+        +..++-+.       ....|..++-.+..+++.-|..||.+|.
T Consensus       457 ~n~d~ntedy--------lfqvilek-------qiriprslsvkas~vlkgflnkdp~erl  502 (593)
T KOG0695|consen  457 DNPDMNTEDY--------LFQVILEK-------QIRIPRSLSVKASHVLKGFLNKDPKERL  502 (593)
T ss_pred             CCcccchhHH--------HHHHHhhh-------cccccceeehhhHHHHHHhhcCCcHHhc
Confidence            211  11111        01111111       1112233334466788889999999985

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.50  E-value=5.8e-14  Score=103.06  Aligned_cols=150  Identities=18%  Similarity=0.213  Sum_probs=91.0

Q ss_pred             CcceEec--CCc--eEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCC
Q 039452            1 PSNVLLD--DNM--VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPT   76 (164)
Q Consensus         1 p~Nill~--~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~   76 (164)
                      |.||++-  .+|  .-||+|||.|+.+..   .......+||..|++||.+-....++..+|.|||||++|+++||..||
T Consensus       148 P~NIvl~~Gedgq~IyKLtDfG~Arel~d---~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF  224 (732)
T KOG4250|consen  148 PGNIVLQIGEDGQSIYKLTDFGAARELDD---NSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPF  224 (732)
T ss_pred             CCcEEEeecCCCceEEeeecccccccCCC---CCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCC
Confidence            7899883  323  459999999998733   235677899999999955543567899999999999999999999999


Q ss_pred             CccccCchhHHHHHHHhhhhhhHH---Hhhhhccc------ccchhhhhHHHHHHHHHHHHhhccccCccCCC--CHHHH
Q 039452           77 DEMFSGEMTLKRWINDLLSVSVME---VVDANLLT------REDRHFAAKQQCVSFVFNLAMECTIESPERRI--NAKEI  145 (164)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp--s~~~v  145 (164)
                      -......-.. ..+..........   ..+.....      .-+.+.........-+-.++..+|..+|.+|.  ...+.
T Consensus       225 ~p~~~pk~~~-~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~  303 (732)
T KOG4250|consen  225 IPFGGPKNNK-EIMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRF  303 (732)
T ss_pred             CcCCCccccc-hhhhhhhccCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchH
Confidence            6532221101 1111000000000   00000000      00111111122233355778888899999998  77777


Q ss_pred             HHHHHHHHH
Q 039452          146 VTELSKIRD  154 (164)
Q Consensus       146 l~~l~~~~~  154 (164)
                      ...+..|.+
T Consensus       304 Fa~~~dIL~  312 (732)
T KOG4250|consen  304 FAEVDDILN  312 (732)
T ss_pred             HHHHHHHHh
Confidence            777776654

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.49  E-value=2.1e-14  Score=104.95  Aligned_cols=128  Identities=20%  Similarity=0.298  Sum_probs=90.3

Q ss_pred             cceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhh--ccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYG--REGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         2 ~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~--~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      .|||++..|.+|++|||.+...  ..........+||++|+|||...  ....++...|+|+.|+.-.|+...++|....
T Consensus       141 anilltd~gDvklaDfgvsaqi--tati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdl  218 (829)
T KOG0576|consen  141 ANILLTDEGDVKLADFGVSAQI--TATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDL  218 (829)
T ss_pred             cceeecccCceeecccCchhhh--hhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCccccc
Confidence            5999999999999999998765  22223345678999999996542  2344788999999999999998888886543


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .+.+..              -+..  ...........+....+.+.++++.|+..+|++|||++.++.
T Consensus       219 hpmr~l--------------~LmT--kS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~  270 (829)
T KOG0576|consen  219 HPMRAL--------------FLMT--KSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ  270 (829)
T ss_pred             chHHHH--------------HHhh--ccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence            221110              0111  111122223334566777999999999999999999998775

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.44  E-value=3.4e-13  Score=88.01  Aligned_cols=94  Identities=35%  Similarity=0.545  Sum_probs=73.3

Q ss_pred             CcceEecC-CceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDD-NMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |.||+++. ++.++|+|||.+........  ......+...|.+||........+.+.|+|++|++++++          
T Consensus       120 ~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l----------  187 (215)
T cd00180         120 PENILLDSDNGKVKLADFGLSKLLTSDKS--LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL----------  187 (215)
T ss_pred             HhhEEEeCCCCcEEEecCCceEEccCCcc--hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH----------
Confidence            57999998 89999999999876522111  123345677899995554332677889999999999998          


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTE  148 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  148 (164)
                                                                ..+.+++.+|++.+|++||++.++++.
T Consensus       188 ------------------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~  214 (215)
T cd00180         188 ------------------------------------------PELKDLIRKMLQKDPEKRPSAKEILEH  214 (215)
T ss_pred             ------------------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence                                                      337889999999999999999998864

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.42  E-value=2.5e-13  Score=90.37  Aligned_cols=99  Identities=24%  Similarity=0.265  Sum_probs=72.4

Q ss_pred             cccccccCchhhhccCc--ccCccchHhHHHHHHHHHhcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchh
Q 039452           36 LATIGYMAPVEYGREGR--VSTNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRH  113 (164)
Q Consensus        36 ~~~~~~~~pe~~~~~~~--~~~~~Di~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  113 (164)
                      .-++.|++||.+.....  .-.++|+|||++++||+.+...||....+.+......                   .+..+
T Consensus       347 ~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkia-------------------leglr  407 (448)
T KOG0195|consen  347 AYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIA-------------------LEGLR  407 (448)
T ss_pred             ccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhh-------------------hcccc
Confidence            34688999965543332  2357899999999999999999998776655433211                   11222


Q ss_pred             hhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHH
Q 039452          114 FAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIR  153 (164)
Q Consensus       114 ~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~  153 (164)
                      ...|+..+..+.++++-|...||.+||.++.++-+|+.+.
T Consensus       408 v~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~  447 (448)
T KOG0195|consen  408 VHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI  447 (448)
T ss_pred             ccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence            2334455566889999999999999999999999998764

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.36  E-value=5.2e-13  Score=88.66  Aligned_cols=120  Identities=18%  Similarity=0.168  Sum_probs=78.7

Q ss_pred             cceEec--CCceEEEeccccceeccCCCCccccccccccccccCchhhhc----cCcccCccchHhHHHHHHHHHhcCCC
Q 039452            2 SNVLLD--DNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGR----EGRVSTNGDVYSFGIMLMEAFTRKKP   75 (164)
Q Consensus         2 ~Nill~--~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~----~~~~~~~~Di~s~g~~~~~~~~g~~p   75 (164)
                      +||||-  ....+||+|||.++.......     ....+..|.+||+...    .....+.+|+|.||++++.+++|..|
T Consensus       150 eNiLif~~df~rvKlcDFG~t~k~g~tV~-----~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~P  224 (378)
T KOG1345|consen  150 ENILIFDADFYRVKLCDFGLTRKVGTTVK-----YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFP  224 (378)
T ss_pred             ceEEEecCCccEEEeeecccccccCceeh-----hhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCc
Confidence            699994  345899999999886421111     1123345777765432    12256789999999999999999999


Q ss_pred             CCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCC
Q 039452           76 TDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERR  139 (164)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  139 (164)
                      +......+..+..|.....+...          ..+   ......++.+..+.++-|..++++|
T Consensus       225 WQka~~~d~~Y~~~~~w~~rk~~----------~~P---~~F~~fs~~a~r~Fkk~lt~~~~dr  275 (378)
T KOG1345|consen  225 WQKASIMDKPYWEWEQWLKRKNP----------ALP---KKFNPFSEKALRLFKKSLTPRFKDR  275 (378)
T ss_pred             chhhhccCchHHHHHHHhcccCc----------cCc---hhhcccCHHHHHHHHHhcCCccccc
Confidence            98766666666665543322111          111   1122334557889999999999999

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.26  E-value=3.6e-12  Score=91.14  Aligned_cols=70  Identities=27%  Similarity=0.526  Sum_probs=55.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCC----CccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGED----QSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT   71 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~   71 (164)
                      |.||....+..+||.|||+.-.+.+..    .....+..+||..|++||++. +..++.++|||++|++++|++.
T Consensus       384 p~nif~~~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~-g~~y~~kvdIyaLGlil~EL~~  457 (516)
T KOG1033|consen  384 PSNIFFSDDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIR-GQQYSEKVDIYALGLILAELLI  457 (516)
T ss_pred             ccccccccchhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHh-hhhhhhhcchhhHHHHHHHHHH
Confidence            578888888889999999987654333    122456678999999996654 6678999999999999999986

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.15  E-value=7.8e-11  Score=80.23  Aligned_cols=109  Identities=18%  Similarity=0.165  Sum_probs=65.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhcc-------CcccCccchHhHHHHHHHHHhcC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGRE-------GRVSTNGDVYSFGIMLMEAFTRK   73 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-------~~~~~~~Di~s~g~~~~~~~~g~   73 (164)
                      |+|++++.+|.+.|+||+.....   +.....  ...+..|.+||.....       ..++.+.|.|++|+++|.+..+.
T Consensus       173 ~~nfll~~~G~v~Lg~F~~~~r~---g~~~~~--~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~  247 (288)
T PF14531_consen  173 PENFLLDQDGGVFLGDFSSLVRA---GTRYRC--SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGR  247 (288)
T ss_dssp             GGGEEE-TTS-EEE--GGGEEET---TEEEEG--GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS
T ss_pred             eeeEEEcCCCCEEEcChHHHeec---Cceeec--cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHcc
Confidence            68999999999999999876653   111111  3344667788544332       23677899999999999999999


Q ss_pred             CCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCC
Q 039452           74 KPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERR  139 (164)
Q Consensus        74 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  139 (164)
                      .||...........                         .......++..+..++..+|++||.+|
T Consensus       248 lPf~~~~~~~~~~~-------------------------~f~~C~~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  248 LPFGLSSPEADPEW-------------------------DFSRCRDMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             -STCCCGGGSTSGG-------------------------GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred             CCCCCCCccccccc-------------------------cchhcCCcCHHHHHHHHHHccCCcccC
Confidence            99975422211000                         111112556668899999999999988

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.14  E-value=8.1e-11  Score=77.82  Aligned_cols=77  Identities=25%  Similarity=0.364  Sum_probs=58.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |.||+++.++.++|+|||.+..+..... .......++..|++||.......++.++|+|++|++++++++|+.||..
T Consensus       126 ~~ni~v~~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      126 PENILLGMDGLVKLADFGLARFIHRDLA-ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             HHHEEEcCCCCEEEeeCceeeEecCccc-ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence            5799999999999999999877632210 0122345677899996553455577799999999999999999999964

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.14  E-value=1.6e-11  Score=89.03  Aligned_cols=72  Identities=29%  Similarity=0.433  Sum_probs=59.7

Q ss_pred             cceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCC
Q 039452            2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         2 ~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      +|+.++.+|.+||.|||.+....    ........||..|.|||.+..........|||++|+++|.+....-||.
T Consensus       699 envivd~~g~~klidfgsaa~~k----sgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy  770 (772)
T KOG1152|consen  699 ENVIVDSNGFVKLIDFGSAAYTK----SGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY  770 (772)
T ss_pred             ccEEEecCCeEEEeeccchhhhc----CCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence            69999999999999999987652    2223457899999999766666667888999999999999888888875

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.13  E-value=1.4e-11  Score=94.51  Aligned_cols=121  Identities=21%  Similarity=0.248  Sum_probs=83.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCC-------------ccccccccccccccCchhhhccCcccCccchHhHHHHHH
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQ-------------SMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLM   67 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~   67 (164)
                      |+|.+|..-|++|+.|||++....-...             ........||+.|.|| +++.-..|...+|.|++|+++|
T Consensus       171 pdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaP-eVilrqgygkpvdwwamGiIly  249 (1205)
T KOG0606|consen  171 PDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAP-EVILRQGYGKPVDWWAMGIILY  249 (1205)
T ss_pred             CCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccCh-hhhhhhccCCCccHHHHHHHHH
Confidence            6799999999999999999865311010             0112345789999999 5555566889999999999999


Q ss_pred             HHHhcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCC
Q 039452           68 EAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRI  140 (164)
Q Consensus        68 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp  140 (164)
                      +.+-|..||.+..+.+- +.            .++...+...+.     ....++++.+++.+.|+.+|-.|-
T Consensus       250 eFLVgcvpffGdtpeel-fg------------~visd~i~wpE~-----dea~p~Ea~dli~~LL~qnp~~Rl  304 (1205)
T KOG0606|consen  250 EFLVGCVPFFGDTPEEL-FG------------QVISDDIEWPEE-----DEALPPEAQDLIEQLLRQNPLCRL  304 (1205)
T ss_pred             HHheeeeeccCCCHHHH-Hh------------hhhhhhcccccc-----CcCCCHHHHHHHHHHHHhChHhhc
Confidence            99999999976433221 11            111111111111     234466688999999999999997

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.11  E-value=2.5e-11  Score=88.49  Aligned_cols=108  Identities=24%  Similarity=0.291  Sum_probs=77.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      ++||+++.+|++++.|||+++.......      ..|+..|+|||.+.   ......|.||||++.+++++|..||... 
T Consensus       125 ~enilld~~Ghi~~tdfglske~v~~~~------~cgt~eymApEI~~---gh~~a~D~ws~gvl~felltg~~pf~~~-  194 (612)
T KOG0603|consen  125 LENVLLLLEGHIKLTDFGLSKEAVKEKI------ACGTYEYRAPEIIN---GHLSAADWWSFGVLAFELLTGTLPFGGD-  194 (612)
T ss_pred             ccceeecccCccccCCchhhhHhHhhhh------cccchhhhhhHhhh---ccCCcccchhhhhhHHHHhhCCCCCchH-
Confidence            5899999999999999999987532221      16899999995554   4567899999999999999999999640 


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINA  142 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  142 (164)
                              .+..        ++        ......|......+.+++..++..+|..|.-.
T Consensus       195 --------~~~~--------Il--------~~~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~  232 (612)
T KOG0603|consen  195 --------TMKR--------IL--------KAELEMPRELSAEARSLFRQLFKRNPENRLGA  232 (612)
T ss_pred             --------HHHH--------Hh--------hhccCCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence                    0000        00        11122345555667778888888888888644

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.05  E-value=1.7e-10  Score=80.57  Aligned_cols=113  Identities=19%  Similarity=0.264  Sum_probs=70.1

Q ss_pred             ccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccccCchhHHHHHHHhhhhhhHH---Hhhh-------
Q 039452           35 TLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVME---VVDA-------  104 (164)
Q Consensus        35 ~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------  104 (164)
                      ..||++|+|||++.....-++++||||.|++++.++++..||.....+..-+.+.+.......+.+   ....       
T Consensus       237 rAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ks  316 (418)
T KOG1167|consen  237 RAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKS  316 (418)
T ss_pred             cCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccc
Confidence            468999999988887888889999999999999999999998654333322222211111000000   0000       


Q ss_pred             ------------------hcccccc---hhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452          105 ------------------NLLTRED---RHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus       105 ------------------~~~~~~~---~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                                        .......   ......+..+..+.+++.+|+..||.+|.|+++.|.
T Consensus       317 n~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk  380 (418)
T KOG1167|consen  317 NIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALK  380 (418)
T ss_pred             cccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence                              0000000   000011122335889999999999999999999875

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.00  E-value=1.1e-09  Score=84.97  Aligned_cols=127  Identities=17%  Similarity=0.174  Sum_probs=77.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc-cccc----cccccccccCchhhhccC---------c-ccCccchHhHHHH
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS-MTQT----QTLATIGYMAPVEYGREG---------R-VSTNGDVYSFGIM   65 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~----~~~~~~~~~~pe~~~~~~---------~-~~~~~Di~s~g~~   65 (164)
                      .+||||++=+.+.|+||...+...-.... ...+    ....-..|.|||.+....         . .+++.||+|.||+
T Consensus       148 sENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCV  227 (1431)
T KOG1240|consen  148 SENILITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCV  227 (1431)
T ss_pred             cceEEEeeechhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHH
Confidence            47999999888999999765432111110 0001    111234789998765422         1 4578999999999


Q ss_pred             HHHHHh-cCCCCCccccCchhHHHHHHHhhh-hhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHH
Q 039452           66 LMEAFT-RKKPTDEMFSGEMTLKRWINDLLS-VSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAK  143 (164)
Q Consensus        66 ~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~  143 (164)
                      +.|++. |.++|..        .+....... ....+.+-             ..-....+++++..|++.||++|.|++
T Consensus       228 iaELf~Eg~PlF~L--------SQL~aYr~~~~~~~e~~L-------------e~Ied~~~Rnlil~Mi~rdPs~RlSAe  286 (1431)
T KOG1240|consen  228 IAELFLEGRPLFTL--------SQLLAYRSGNADDPEQLL-------------EKIEDVSLRNLILSMIQRDPSKRLSAE  286 (1431)
T ss_pred             HHHHHhcCCCcccH--------HHHHhHhccCccCHHHHH-------------HhCcCccHHHHHHHHHccCchhccCHH
Confidence            999985 7888752        111110000 00000000             000111378899999999999999999


Q ss_pred             HHHHH
Q 039452          144 EIVTE  148 (164)
Q Consensus       144 ~vl~~  148 (164)
                      +.++.
T Consensus       287 dyL~~  291 (1431)
T KOG1240|consen  287 DYLQK  291 (1431)
T ss_pred             HHHHh
Confidence            99987

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=98.94  E-value=6.6e-09  Score=72.08  Aligned_cols=138  Identities=25%  Similarity=0.336  Sum_probs=86.7

Q ss_pred             CcceEecCCc-eEEEeccccceeccCCCCcc----ccccccccccccCchhhhcc--CcccCccchHhHHHHHHHHHhcC
Q 039452            1 PSNVLLDDNM-VAHLSDFGIAKLLIGEDQSM----TQTQTLATIGYMAPVEYGRE--GRVSTNGDVYSFGIMLMEAFTRK   73 (164)
Q Consensus         1 p~Nill~~~~-~~kl~dfg~~~~~~~~~~~~----~~~~~~~~~~~~~pe~~~~~--~~~~~~~Di~s~g~~~~~~~~g~   73 (164)
                      |+||+++..+ .+++.|||.++.+.......    ......++..|++||.+...  .......|+|++|+++++++.+.
T Consensus       129 p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~  208 (384)
T COG0515         129 PENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGL  208 (384)
T ss_pred             HHHeeecCCCCeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCC
Confidence            6899999888 79999999987653222211    23556789999999666543  46788999999999999999999


Q ss_pred             CCCCccccC--chhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHH
Q 039452           74 KPTDEMFSG--EMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTE  148 (164)
Q Consensus        74 ~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  148 (164)
                      .||......  .......+......        ..  ...............+.+++..++..+|..|.+.......
T Consensus       209 ~p~~~~~~~~~~~~~~~~~~~~~~~--------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         209 PPFEGEKNSSATSQTLKIILELPTP--------SL--ASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             CCCCCCCccccHHHHHHHHHhcCCc--------cc--ccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence            996543321  11111111100000        00  0000000001222447789999999999999988766654

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=98.80  E-value=2.5e-08  Score=70.29  Aligned_cols=125  Identities=20%  Similarity=0.257  Sum_probs=77.1

Q ss_pred             CcceEec--CCce--EEEeccccceeccCCC---Ccccc-ccccccccccCchhhhccCc-----ccCccchHhHHHHHH
Q 039452            1 PSNVLLD--DNMV--AHLSDFGIAKLLIGED---QSMTQ-TQTLATIGYMAPVEYGREGR-----VSTNGDVYSFGIMLM   67 (164)
Q Consensus         1 p~Nill~--~~~~--~kl~dfg~~~~~~~~~---~~~~~-~~~~~~~~~~~pe~~~~~~~-----~~~~~Di~s~g~~~~   67 (164)
                      +.||||.  .++.  +.|+|||.+-.-....   .+..+ ....|.-..+|||.......     .-.++|.|+.|.+-|
T Consensus       369 SDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaY  448 (598)
T KOG4158|consen  369 SDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAY  448 (598)
T ss_pred             ccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHH
Confidence            4799994  4443  5789999864311111   11111 12235567789955432111     114799999999999


Q ss_pred             HHHhcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHH
Q 039452           68 EAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKE  144 (164)
Q Consensus        68 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~  144 (164)
                      |++...-||+.  .+++.+..                ..+ ........+..+++.+++++...|+.||++|+|..-
T Consensus       449 EIfg~~NPFY~--rGem~L~~----------------r~Y-qe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~i  506 (598)
T KOG4158|consen  449 EIFGRSNPFYK--RGEMLLDT----------------RTY-QESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPNI  506 (598)
T ss_pred             HHhccCCcccc--cchheech----------------hhh-hhhhCCCCcccCChHHHHHHHHHhcCCccccCCccH
Confidence            99999999984  33332211                001 011122345677888999999999999999998653

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.75  E-value=1.1e-09  Score=82.13  Aligned_cols=131  Identities=21%  Similarity=0.275  Sum_probs=90.2

Q ss_pred             CcceEecCCc-eEEEeccccceeccC-CCCccccccccc-cccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCC
Q 039452            1 PSNVLLDDNM-VAHLSDFGIAKLLIG-EDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         1 p~Nill~~~~-~~kl~dfg~~~~~~~-~~~~~~~~~~~~-~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      |+|.+++.++ ..+++|||++..+.. .+.........| ++.|.+||............|+||.|+++..+++|..|+.
T Consensus       152 P~n~~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~  231 (601)
T KOG0590|consen  152 PSNSLLDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWD  231 (601)
T ss_pred             CccchhccCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcc
Confidence            6789999888 999999999987654 333334445567 9999999666554556788999999999999999999987


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ........+..|....                ................++..+++..+|+.|.+.+++..
T Consensus       232 ~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~  285 (601)
T KOG0590|consen  232 FPSRKDGRYSSWKSNK----------------GRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKL  285 (601)
T ss_pred             ccccccccceeecccc----------------cccccCccccCChhhhhcccccccCCchhccccccccc
Confidence            5433332222211110                00011122334445778889999999999999887643

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.56  E-value=7.1e-07  Score=63.77  Aligned_cols=151  Identities=13%  Similarity=0.089  Sum_probs=92.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhcc----CcccCccchHhHHHHHHHHHhc-CCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGRE----GRVSTNGDVYSFGIMLMEAFTR-KKP   75 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~----~~~~~~~Di~s~g~~~~~~~~g-~~p   75 (164)
                      ++|+|+++++.+.+.|-..-...   .........+|...|.+||.....    ..-+...|.+.+|+++++++.| ..|
T Consensus       145 ~~~~lVsd~~~V~LVdsDsfqi~---~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHP  221 (637)
T COG4248         145 QNSFLVSDDSKVVLVDSDSFQIN---ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHP  221 (637)
T ss_pred             ccceeeecCceEEEEcccceeec---cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCC
Confidence            47899999999999875544332   222334557889999999655321    1234568999999999998865 899


Q ss_pred             CCccccCc---hhHH-HHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhcccc--CccCCCCHHHHHHHH
Q 039452           76 TDEMFSGE---MTLK-RWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIE--SPERRINAKEIVTEL  149 (164)
Q Consensus        76 ~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~--~p~~Rps~~~vl~~l  149 (164)
                      |++..-..   ..+. ....-...  ...-.+..  ....+......-+++.+..+..+|+..  ++.-|||++..+..|
T Consensus       222 ysGI~~~~~ap~p~E~~Ia~g~f~--ya~~~~~g--~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl  297 (637)
T COG4248         222 YSGIPLISDAPNPLETDIAHGRFA--YASDQRRG--LKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAAL  297 (637)
T ss_pred             CCcccccCCCCCcchhhhhcceee--echhccCC--CCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Confidence            98743211   1111 11000000  00000000  001111112235567788888888876  466899999999999


Q ss_pred             HHHHHHhhc
Q 039452          150 SKIRDSLFR  158 (164)
Q Consensus       150 ~~~~~~~~~  158 (164)
                      ..+.++|-+
T Consensus       298 ~al~~~L~~  306 (637)
T COG4248         298 DALRQQLKK  306 (637)
T ss_pred             HHHHHhhhh
Confidence            999998865

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=98.13  E-value=4.8e-05  Score=53.57  Aligned_cols=139  Identities=16%  Similarity=0.140  Sum_probs=86.4

Q ss_pred             CcceEecCC-----ceEEEeccccce--eccCCCCc----cc--cccccccccccCchhhhccCcccCccchHhHHHHHH
Q 039452            1 PSNVLLDDN-----MVAHLSDFGIAK--LLIGEDQS----MT--QTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLM   67 (164)
Q Consensus         1 p~Nill~~~-----~~~kl~dfg~~~--~~~~~~~~----~~--~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~   67 (164)
                      |+|++++..     ..+.+.|||+++  ........    ..  .....||..|.++ ........+.+-|+||++-++.
T Consensus       150 p~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~-~~H~~~e~~r~DDles~~Y~l~  228 (322)
T KOG1164|consen  150 PENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASI-NVHLGIEQGRRDDLESLFYMLL  228 (322)
T ss_pred             HHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccH-HHhCCCccCCchhhhhHHHHHH
Confidence            678888754     468999999998  33211111    11  1224489999988 6666777889999999999999


Q ss_pred             HHHhcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           68 EAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        68 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ++..|..|+........ .....         ..........      .....+..+..++..+-..+...+|....+..
T Consensus       229 el~~g~LPW~~~~~~~~-~~~~~---------~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~  292 (322)
T KOG1164|consen  229 ELLKGSLPWEALEMTDL-KSKFE---------KDPRKLLTDR------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAE  292 (322)
T ss_pred             HHhcCCCCCccccccch-HHHHH---------HHhhhhcccc------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHH
Confidence            99999999865432211 00000         0000000000      11112334556666666689999999998888


Q ss_pred             HHHHHHHHh
Q 039452          148 ELSKIRDSL  156 (164)
Q Consensus       148 ~l~~~~~~~  156 (164)
                      .+.......
T Consensus       293 ~l~~~~~~~  301 (322)
T KOG1164|consen  293 LLKDVFDSE  301 (322)
T ss_pred             HHHHHHHhc
Confidence            877766553

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=97.99  E-value=0.00012  Score=51.14  Aligned_cols=143  Identities=14%  Similarity=0.067  Sum_probs=86.7

Q ss_pred             CcceEecCC-----ceEEEeccccceeccCCCCc-----cccccccccccccCchhhhccCcccCccchHhHHHHHHHHH
Q 039452            1 PSNVLLDDN-----MVAHLSDFGIAKLLIGEDQS-----MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAF   70 (164)
Q Consensus         1 p~Nill~~~-----~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~   70 (164)
                      |+|+||...     ..+.+.|||++....+....     .......||-.||+- -...+..-+.+-|+=|+|-++...+
T Consensus       152 PdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSI-NTHlGrEQSRRDDLEaLGHvFmYFL  230 (449)
T KOG1165|consen  152 PDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSI-NTHLGREQSRRDDLEALGHVFMYFL  230 (449)
T ss_pred             ccceeecCCCCCCCceEEEEeccchhhhcCccccccCccccccccccceeeeEe-eccccchhhhhhhHHHhhhhhhhhc
Confidence            789999743     46789999999887543321     123345688899975 3334555778899999999999999


Q ss_pred             hcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHH
Q 039452           71 TRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELS  150 (164)
Q Consensus        71 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~  150 (164)
                      -|..||.++....-.          ....++-+...   ........+..|.++...+.-.-+.+-++-|..+-+...+.
T Consensus       231 RGsLPWQGLKA~tnK----------~kYeKIGe~Kr---~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~  297 (449)
T KOG1165|consen  231 RGSLPWQGLKADTNK----------EKYEKIGETKR---STPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFD  297 (449)
T ss_pred             cCCCccccccCcchH----------HHHHHhccccc---cCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHH
Confidence            999999876443211          11112211111   11112222334555665555555566666677666666665


Q ss_pred             HHHHHhh
Q 039452          151 KIRDSLF  157 (164)
Q Consensus       151 ~~~~~~~  157 (164)
                      .+...+.
T Consensus       298 dvldr~g  304 (449)
T KOG1165|consen  298 DVLDRLG  304 (449)
T ss_pred             HHHHhcC
Confidence            5554443

>PRK12274 serine/threonine protein kinase; Provisional

Probab=97.97  E-value=9.8e-06  Score=53.21  Aligned_cols=78  Identities=18%  Similarity=0.130  Sum_probs=51.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc---cc--------cccccccccccCchhhhccCccc-CccchHhHHHHHHH
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS---MT--------QTQTLATIGYMAPVEYGREGRVS-TNGDVYSFGIMLME   68 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~---~~--------~~~~~~~~~~~~pe~~~~~~~~~-~~~Di~s~g~~~~~   68 (164)
                      |+|||++.++.++|+|||++.........   ..        ......++.++.|++.......+ .+.+.++.|..+|.
T Consensus       120 p~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~  199 (218)
T PRK12274        120 EANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYR  199 (218)
T ss_pred             cceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHH
Confidence            57999999999999999999754221110   00        01123567788886654333344 33455578999999


Q ss_pred             HHhcCCCCCc
Q 039452           69 AFTRKKPTDE   78 (164)
Q Consensus        69 ~~~g~~p~~~   78 (164)
                      ++|+..++-.
T Consensus       200 ~~~~~~~~~~  209 (218)
T PRK12274        200 FVTRRVLHWE  209 (218)
T ss_pred             HHhccCCccc
Confidence            9999988653

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=97.82  E-value=7.9e-06  Score=62.91  Aligned_cols=62  Identities=21%  Similarity=0.333  Sum_probs=43.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHH
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGI   64 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~   64 (164)
                      |+||||+.++.+||+|||+++....  .........+++.|.+||.......-...+++|++|.
T Consensus       132 P~NILl~~~g~vkL~DFGls~~~~~--~~~~~~~~~~t~~~~~pe~~~~~~~~~~~s~~~s~g~  193 (669)
T cd05610         132 PDNMLISNEGHIKLTDFGLSKVTLN--RELNMMDILTTPSMAKPKNDYSRTPGQVLSLISSLGF  193 (669)
T ss_pred             HHHEEEcCCCCEEEEeCCCCccccC--CcccccccccCccccCccccccCCCCceeeeeeecCc
Confidence            6899999999999999999987522  2222334568889999965544444444567777774

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=97.71  E-value=1.3e-05  Score=60.30  Aligned_cols=129  Identities=14%  Similarity=0.143  Sum_probs=77.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccc-------cccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-c
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMT-------QTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-R   72 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~-------~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g   72 (164)
                      |++|.++.++..||+.|+++....+...+..       .........|.+| ++......+.++|++|+|+..|.+.. |
T Consensus       128 p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~ap-E~~~~~~~~~~sd~fSlG~li~~i~~~g  206 (700)
T KOG2137|consen  128 PEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAP-EYLLGTTNTPASDVFSLGVLIYTIYNGG  206 (700)
T ss_pred             hhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccc-hhhccccccccccceeeeeEEEEEecCC
Confidence            6788999999999999998766433222111       1112234579999 44445667789999999999998874 4


Q ss_pred             CCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           73 KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        73 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      +..+.... ....+.. ..               ....-........++.++.+-+.+++..++..||++..+..
T Consensus       207 k~i~~a~~-~~~~~~~-~~---------------~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~~  264 (700)
T KOG2137|consen  207 KSIIAANG-GLLSYSF-SR---------------NLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLLLS  264 (700)
T ss_pred             cchhhccC-Ccchhhh-hh---------------cccccccccccccCcHHHHHHHHHHhcCCcccCcchhhhhc
Confidence            44433211 1100000 00               00000111111456677888999999999999996665543

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=97.50  E-value=8.3e-05  Score=58.73  Aligned_cols=124  Identities=21%  Similarity=0.266  Sum_probs=77.9

Q ss_pred             CcceEecCCceEEEeccccceecc------CC---CC--------------c------cccccccccccccCchhhhccC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLI------GE---DQ--------------S------MTQTQTLATIGYMAPVEYGREG   51 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~------~~---~~--------------~------~~~~~~~~~~~~~~pe~~~~~~   51 (164)
                      |.|+++..+|..++++||......      +.   ..              .      .......+++.|.+| +...+.
T Consensus       932 p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laP-e~~lg~ 1010 (1205)
T KOG0606|consen  932 PDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAP-EILLGR 1010 (1205)
T ss_pred             ccchhhcccCCcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCC-cccccc
Confidence            457777888888899987432210      00   00              0      001234688999999 555566


Q ss_pred             cccCccchHhHHHHHHHHHhcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhc
Q 039452           52 RVSTNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMEC  131 (164)
Q Consensus        52 ~~~~~~Di~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c  131 (164)
                      .....+|.|+.|+++++.++|..||....+....             ..+++     ....-...+...++...+++...
T Consensus      1011 ~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f-------------~ni~~-----~~~~~p~g~~~~s~~aq~~~~~l 1072 (1205)
T KOG0606|consen 1011 RHGSAADWWSSGVCLFEVLTGIPPFNAETPQQIF-------------ENILN-----RDIPWPEGPEEGSYEAQDLINRL 1072 (1205)
T ss_pred             cCCCcchhhhhhhhhhhhhcCCCCCCCcchhhhh-------------hcccc-----CCCCCCCCccccChhhhhhhhhh
Confidence            6777889999999999999999999754332211             11111     11111112334555677888888


Q ss_pred             cccCccCCCCHH
Q 039452          132 TIESPERRINAK  143 (164)
Q Consensus       132 l~~~p~~Rps~~  143 (164)
                      +..+|.+|..+.
T Consensus      1073 l~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1073 LTEEPTQRLGAK 1084 (1205)
T ss_pred             hccCchhccCcc
Confidence            999999998765

>PRK09188 serine/threonine protein kinase; Provisional

Probab=97.47  E-value=0.00011  Score=52.53  Aligned_cols=47  Identities=21%  Similarity=0.211  Sum_probs=31.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc------cccccccccccccCchhh
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS------MTQTQTLATIGYMAPVEY   47 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~~~~~~pe~~   47 (164)
                      |+|||++.++.++|+|||+++.+......      ...+...+++.|.+||.+
T Consensus       140 P~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~  192 (365)
T PRK09188        140 PQNWLMGPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDAL  192 (365)
T ss_pred             cceEEEcCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccC
Confidence            78999998899999999999876422111      111334566667777443

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=97.35  E-value=4.8e-05  Score=50.76  Aligned_cols=53  Identities=13%  Similarity=0.173  Sum_probs=35.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHH
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEA   69 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~   69 (164)
                      |+||+++.+| +++.|||......  ...       .      -..+.....+..++|+|++|+.+...
T Consensus       163 p~Nili~~~g-i~liDfg~~~~~~--e~~-------a------~d~~vler~y~~~~di~~lg~~~~~~  215 (232)
T PRK10359        163 KGNFIVSKNG-LRIIDLSGKRCTA--QRK-------A------KDRIDLERHYGIKNEIKDLGYYLLIY  215 (232)
T ss_pred             hHHEEEeCCC-EEEEECCCccccc--chh-------h------HHHHHHHhHhcccccccceeEeehHH
Confidence            7899999888 9999999876431  100       0      01222233355789999999887644

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=97.33  E-value=0.001  Score=44.66  Aligned_cols=81  Identities=22%  Similarity=0.157  Sum_probs=54.9

Q ss_pred             CcceEecC---CceEEEeccccceeccCCCCc-----cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhc
Q 039452            1 PSNVLLDD---NMVAHLSDFGIAKLLIGEDQS-----MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTR   72 (164)
Q Consensus         1 p~Nill~~---~~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g   72 (164)
                      |+|+|..-   ...+.+.|||++..+.+....     .......||..|.+- -...+..-+.+-|+=|+|-++...--|
T Consensus       139 PdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASi-nAh~g~eqSRRDDmeSvgYvLmYfnrG  217 (341)
T KOG1163|consen  139 PDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASI-NAHLGIEQSRRDDMESVGYVLMYFNRG  217 (341)
T ss_pred             ccceeeccccccceEEEEeccchhhhccccccccCccccCCccceeeeehhh-hhhhhhhhhhhhhhhhhcceeeeeecC
Confidence            78888863   356789999999876532221     123345678777653 222233356778999999998888889


Q ss_pred             CCCCCccccC
Q 039452           73 KKPTDEMFSG   82 (164)
Q Consensus        73 ~~p~~~~~~~   82 (164)
                      ..||.++...
T Consensus       218 ~LPWQglka~  227 (341)
T KOG1163|consen  218 SLPWQGLKAA  227 (341)
T ss_pred             CCcccccchh
Confidence            9999876543

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=97.02  E-value=0.0097  Score=47.66  Aligned_cols=73  Identities=18%  Similarity=0.067  Sum_probs=52.8

Q ss_pred             CcceEec-------CCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcC
Q 039452            1 PSNVLLD-------DNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRK   73 (164)
Q Consensus         1 p~Nill~-------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~   73 (164)
                      |.|+||.       .+..++|+|||.+.-|.--..........++-.+.++ +...+..|+..+|.|.++.+.+-|+.|+
T Consensus       822 PDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~-EM~~grpWtYq~DyfGlAa~~h~mLFG~  900 (974)
T KOG1166|consen  822 PDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCI-EMREGRPWTYQIDYFGLAATVHVMLFGK  900 (974)
T ss_pred             cceeEeecccCCCCcccceEEEecccceeeeEcCCCcEEeeeeccccchhH-HHhcCCCCchhhhhHHHHHHHHHHHHHH
Confidence            6788883       2346899999998655311111223334567778888 7777888999999999999999998875


Q ss_pred             C
Q 039452           74 K   74 (164)
Q Consensus        74 ~   74 (164)
                      .
T Consensus       901 y  901 (974)
T KOG1166|consen  901 Y  901 (974)
T ss_pred             H
Confidence            4

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.01  E-value=0.0016  Score=48.45  Aligned_cols=133  Identities=19%  Similarity=0.273  Sum_probs=76.3

Q ss_pred             CcceEecCC-ceEEEeccccceeccCCCCcccc---ccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCC
Q 039452            1 PSNVLLDDN-MVAHLSDFGIAKLLIGEDQSMTQ---TQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPT   76 (164)
Q Consensus         1 p~Nill~~~-~~~kl~dfg~~~~~~~~~~~~~~---~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~   76 (164)
                      |.||+...+ ..++++|||....+.........   -...+...|++| ++..+ -.+...|++++|.++.+...+..+.
T Consensus       250 p~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~k-e~~~~-l~~~~~di~sl~ev~l~~~l~~~~~  327 (524)
T KOG0601|consen  250 PANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAK-ELLNG-LATFASDIFSLGEVILEAILGSHLP  327 (524)
T ss_pred             hhheecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeCh-hhhcc-ccchHhhhcchhhhhHhhHhhcccc
Confidence            568888887 78899999998877433321111   122466789999 44433 3567889999999999988776654


Q ss_pred             CccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHh
Q 039452           77 DEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL  156 (164)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~  156 (164)
                      .......     |..          ++....     ...........+...+.++++.++-.|+++..+ ..+.-|...+
T Consensus       328 ~~g~~~~-----W~~----------~r~~~i-----p~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~-~~l~~i~s~~  386 (524)
T KOG0601|consen  328 SVGKNSS-----WSQ----------LRQGYI-----PLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQIL-TALNVIHSKL  386 (524)
T ss_pred             cCCCCCC-----ccc----------cccccC-----chhhhcCcchhhhhHHHHhcCcchhhhhHHHHH-hccccccchh
Confidence            3210000     000          000000     000011112224458888999999999887644 4444444333

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=96.31  E-value=0.011  Score=41.75  Aligned_cols=88  Identities=20%  Similarity=0.312  Sum_probs=50.5

Q ss_pred             ccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCC-CccccCchhHHHHHHHhhhhhhHHHhhhhcccccchh
Q 039452           35 TLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPT-DEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRH  113 (164)
Q Consensus        35 ~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  113 (164)
                      ..+-++|.+| +.-.....+.++|||+||+...+|.-+..-- .......              ..+.+........+. 
T Consensus       242 ~~~~~g~~a~-~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~--------------~ee~ia~~i~~len~-  305 (458)
T KOG1266|consen  242 NTSLPGFSAP-ESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVE--------------VEENIANVIIGLENG-  305 (458)
T ss_pred             cccCCccccC-CcCcccccccchhhhhhhHHHHHHHHheeccCCCcceee--------------hhhhhhhheeeccCc-
Confidence            3455677787 5544445667899999998888887665421 1100000              001111111110000 


Q ss_pred             hhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452          114 FAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus       114 ~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                               --+.++.+|++-.|..||+|.+++.
T Consensus       306 ---------lqr~~i~kcl~~eP~~rp~ar~llf  330 (458)
T KOG1266|consen  306 ---------LQRGSITKCLEGEPNGRPDARLLLF  330 (458)
T ss_pred             ---------cccCcCcccccCCCCCCcchhhhhc
Confidence                     0245788999999999999987754

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=94.08  E-value=0.036  Score=37.50  Aligned_cols=22  Identities=36%  Similarity=0.459  Sum_probs=19.8

Q ss_pred             CcceEecCCceEEEecccccee
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKL   22 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~   22 (164)
                      |.|||++.++.++|+|||.++.
T Consensus       170 p~NILv~~~~~v~LIDfg~~~~  191 (239)
T PRK01723        170 AHNILLDPDGKFWLIDFDRGEL  191 (239)
T ss_pred             chhEEEcCCCCEEEEECCCccc
Confidence            7899999888999999998865

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=93.16  E-value=0.06  Score=40.42  Aligned_cols=120  Identities=17%  Similarity=0.128  Sum_probs=68.1

Q ss_pred             CcceEecCC-ceEEEeccccceeccCCCCcccccccccccccc-CchhhhccCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDDN-MVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYM-APVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~-~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+||++..+ +..+++|||....+.  ..   .....+...+. ..|.......+..+.|++++|..+.+.+++.+.-..
T Consensus       394 psni~i~~~~~~~~~~~~~~~t~~~--~~---~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~  468 (524)
T KOG0601|consen  394 PSNILISNDGFFSKLGDFGCWTRLA--FS---SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSES  468 (524)
T ss_pred             ccceeeccchhhhhccccccccccc--ee---cccccccccccccchhhccccccccccccccccccccccccCcccCcc
Confidence            689999875 778899998875321  00   11111222233 233666666678899999999999888877654321


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTEL  149 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l  149 (164)
                      ...                ... +.......      .+.. ...+..+.+.++..++..||++.++....
T Consensus       469 ~~~----------------~~~-i~~~~~p~------~~~~-~~~~q~~~kv~~~~~~~~~~l~~~l~~~~  515 (524)
T KOG0601|consen  469 GVQ----------------SLT-IRSGDTPN------LPGL-KLQLQVLLKVMINPDRKRRPSAVELSLHS  515 (524)
T ss_pred             ccc----------------cee-eecccccC------CCch-HHhhhhhhhhhcCCccccchhhhhhcccc
Confidence            000                000 00000000      0111 13356678888899999998877665443

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=92.77  E-value=0.2  Score=38.03  Aligned_cols=77  Identities=16%  Similarity=0.210  Sum_probs=43.3

Q ss_pred             CccchHhHHHHHHHHHhcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccc-----hhhhhHHHHHHHHHHHHh
Q 039452           55 TNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTRED-----RHFAAKQQCVSFVFNLAM  129 (164)
Q Consensus        55 ~~~Di~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~  129 (164)
                      +++|||++|.+..++.-|...+.....  .            +...++.+.......     ......-.+...++.+.+
T Consensus       110 pKsdVwsl~~i~~el~L~~~l~~~~~~--s------------~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~  175 (725)
T KOG1093|consen  110 PKSDVWSLGFIILELYLGISLEAELTE--S------------EYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLK  175 (725)
T ss_pred             cchhhhhHHHHHHHHHHhhHHHHHHHH--H------------HHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhc
Confidence            689999999999998777655432111  1            111111111100000     000112245556788999


Q ss_pred             hccccCccCCCCHHHH
Q 039452          130 ECTIESPERRINAKEI  145 (164)
Q Consensus       130 ~cl~~~p~~Rps~~~v  145 (164)
                      +|+...|..||...++
T Consensus       176 ~c~~~~~~ir~l~~~~  191 (725)
T KOG1093|consen  176 KCLWLEPIIRPLPMEL  191 (725)
T ss_pred             cCCccccccccchhHH
Confidence            9999999998865544

>smart00090 RIO RIO-like kinase

Probab=92.05  E-value=0.079  Score=35.83  Aligned_cols=22  Identities=18%  Similarity=0.164  Sum_probs=19.1

Q ss_pred             CcceEecCCceEEEeccccceec
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLL   23 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~   23 (164)
                      |+||+++ ++.++|+|||.+...
T Consensus       177 p~NIli~-~~~i~LiDFg~a~~~  198 (237)
T smart00090      177 EYNILVH-DGKVVIIDVSQSVEL  198 (237)
T ss_pred             hhhEEEE-CCCEEEEEChhhhcc
Confidence            7899999 788999999988753

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=91.85  E-value=0.35  Score=37.46  Aligned_cols=65  Identities=14%  Similarity=0.210  Sum_probs=40.0

Q ss_pred             ceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhc
Q 039452            3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTR   72 (164)
Q Consensus         3 Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g   72 (164)
                      .|+++..|..||++|..+....+...  .......-..|..|++.. ...  -..|.|-|||++++++.|
T Consensus       135 SVfVn~~GeWkLggle~v~~~~~~~~--~~~~~~~~~s~~~P~~~~-~s~--~s~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  135 SVFVNESGEWKLGGLELVSKASGFNA--PAKSLYLIESFDDPEEID-PSE--WSIDSWGLGCLIEELFNG  199 (690)
T ss_pred             eEEEcCCCcEEEeeeEEEeccccCCc--ccccchhhhcccChhhcC-ccc--cchhhhhHHHHHHHHhCc
Confidence            47788899999999987755422221  111111223355563331 111  246999999999999998

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=91.83  E-value=0.14  Score=37.94  Aligned_cols=23  Identities=30%  Similarity=0.421  Sum_probs=21.2

Q ss_pred             CcceEecCCceEEEeccccceec
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLL   23 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~   23 (164)
                      |.||+++.++.+++.|||++..+
T Consensus       285 PgNilv~~~g~i~liDfG~~~~l  307 (437)
T TIGR01982       285 PGNIFVLKDGKIIALDFGIVGRL  307 (437)
T ss_pred             cccEEECCCCcEEEEeCCCeeEC
Confidence            78999999999999999998776

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>PRK14879 serine/threonine protein kinase; Provisional

Probab=90.93  E-value=0.17  Score=33.25  Aligned_cols=21  Identities=38%  Similarity=0.574  Sum_probs=18.2

Q ss_pred             CcceEecCCceEEEecccccee
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKL   22 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~   22 (164)
                      |.||+++ ++.++++|||.+..
T Consensus       123 p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879        123 TSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             cccEEEE-CCCEEEEECCcccC
Confidence            6899999 78899999998764

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=90.19  E-value=0.21  Score=32.44  Aligned_cols=21  Identities=33%  Similarity=0.550  Sum_probs=18.4

Q ss_pred             CcceEecCCceEEEecccccee
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKL   22 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~   22 (164)
                      |.||+++ ++.+++.|||.+..
T Consensus       118 ~~Nil~~-~~~~~liDfg~a~~  138 (199)
T TIGR03724       118 TSNIIVR-DDKLYLIDFGLGKY  138 (199)
T ss_pred             cceEEEE-CCcEEEEECCCCcC
Confidence            6899999 78899999998765

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>cd05151 ChoK Choline Kinase (ChoK)

Probab=88.38  E-value=0.39  Score=30.19  Aligned_cols=21  Identities=38%  Similarity=0.515  Sum_probs=17.4

Q ss_pred             CcceEecCCceEEEecccccee
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKL   22 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~   22 (164)
                      |.||+++ ++.+++.||+.+..
T Consensus       116 ~~Nil~~-~~~~~liDf~~a~~  136 (170)
T cd05151         116 PGNFLLD-DGRLWLIDWEYAGM  136 (170)
T ss_pred             cCcEEEE-CCeEEEEecccccC
Confidence            5799998 56789999998764

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=87.68  E-value=0.27  Score=37.42  Aligned_cols=21  Identities=33%  Similarity=0.498  Sum_probs=18.3

Q ss_pred             CcceEecCCceEEEecccccee
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKL   22 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~   22 (164)
                      |+|||+ .++.++|+|||+++.
T Consensus       456 p~NILl-~~~~~~liDFGla~~  476 (535)
T PRK09605        456 TSNFIV-RDDRLYLIDFGLGKY  476 (535)
T ss_pred             hHHEEE-ECCcEEEEeCccccc
Confidence            689999 577899999999875

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=86.09  E-value=0.51  Score=36.02  Aligned_cols=23  Identities=30%  Similarity=0.431  Sum_probs=20.6

Q ss_pred             CcceEecCCc----eEEEeccccceec
Q 039452            1 PSNVLLDDNM----VAHLSDFGIAKLL   23 (164)
Q Consensus         1 p~Nill~~~~----~~kl~dfg~~~~~   23 (164)
                      |.||+++.++    .+++.|||+...+
T Consensus       288 PGNIlv~~~g~~~~~i~llDFGivg~l  314 (537)
T PRK04750        288 PGNIFVSYDPPENPRYIALDFGIVGSL  314 (537)
T ss_pred             hHHeEEecCCCCCCeEEEEecceEEEC
Confidence            7899999887    9999999998776

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=83.01  E-value=0.27  Score=42.37  Aligned_cols=70  Identities=13%  Similarity=0.059  Sum_probs=48.9

Q ss_pred             cceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCC
Q 039452            2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKK   74 (164)
Q Consensus         2 ~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~   74 (164)
                      .|.+|..+..++++++|+.+..  .......+...+++.|+.+ .+.+.-.++.++|+|..++.+|....|..
T Consensus      1369 ~lpmIVtny~v~~gk~gLdKIk--np~~sf~Gl~l~sp~~v~q-li~N~ik~t~rsdilr~s~~ly~rs~~n~ 1438 (2724)
T KOG1826|consen 1369 TLPMIVTNYNVKLGKGGLDKIK--NPVLSFFGLELCSPIYVLQ-LIKNEIKFTKRSDILRRSLSLYLRSDGNA 1438 (2724)
T ss_pred             hccceecCCccccccccccccc--CchHhhhhhhhCCHHHHHH-HHHHHHhhhhHHHHHHHHHHHHHHhcccH
Confidence            3667777778899999998742  2222233445677778887 77666677778999998888887655443

>PRK10345 hypothetical protein; Provisional

Probab=80.27  E-value=0.97  Score=30.04  Aligned_cols=20  Identities=20%  Similarity=0.272  Sum_probs=14.7

Q ss_pred             CcceEecC----CceEEEeccccc
Q 039452            1 PSNVLLDD----NMVAHLSDFGIA   20 (164)
Q Consensus         1 p~Nill~~----~~~~kl~dfg~~   20 (164)
                      |+|||++.    ++.++|+|++.+
T Consensus       133 p~NILl~~~~~~~~~~~LiDg~G~  156 (210)
T PRK10345        133 PQNILCQRISESEVIPVVCDNIGE  156 (210)
T ss_pred             HHHEEEeccCCCCCcEEEEECCCC
Confidence            68999974    347999995433

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	164
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		7e-11
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		1e-10
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		3e-10
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		8e-10
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		3e-08
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		4e-08
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		4e-08
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		6e-08
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		6e-08
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		7e-08
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		1e-07
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		2e-07
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		2e-07
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		2e-07
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		3e-07
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		3e-07
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		3e-07
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		3e-07
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		3e-07
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		3e-07
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		3e-07
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		3e-07
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		3e-07
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		3e-07
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		3e-07
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		3e-07
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		4e-07
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		4e-07
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		4e-07
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		4e-07
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		4e-07
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		1e-06
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		2e-06
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		2e-06
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		2e-06
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		2e-06
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		2e-06
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		2e-06
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		2e-06
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		2e-06
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		2e-06
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		3e-06
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		3e-06
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		3e-06
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		3e-06
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		3e-06
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		3e-06
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		3e-06
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		3e-06
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		3e-06
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		3e-06
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		3e-06
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		3e-06
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		3e-06
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		3e-06
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		3e-06
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		3e-06
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		3e-06
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		4e-06
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		4e-06
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		4e-06
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		4e-06
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		4e-06
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		4e-06
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		4e-06
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		4e-06
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		4e-06
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		5e-06
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		5e-06
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		5e-06
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		6e-06
4fl3_A	635	Structural And Biophysical Characterization Of The		6e-06
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		6e-06
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		6e-06
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		6e-06
4fl2_A	636	Structural And Biophysical Characterization Of The		6e-06
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		7e-06
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		7e-06
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		7e-06
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		7e-06
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		7e-06
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		7e-06
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		7e-06
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		7e-06
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		7e-06
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		7e-06
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		7e-06
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		7e-06
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		8e-06
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		1e-05
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		1e-05
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		1e-05
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		1e-05
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-05
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-05
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		1e-05
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-05
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		1e-05
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		1e-05
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-05
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-05
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-05
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-05
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-05
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-05
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-05
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		1e-05
3b2t_A	311	Structure Of Phosphotransferase Length = 311		1e-05
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		2e-05
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		2e-05
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		2e-05
3g51_A	325	Structural Diversity Of The Active Conformation Of		2e-05
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		2e-05
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		2e-05
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		2e-05
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		2e-05
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		2e-05
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		2e-05
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		2e-05
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		2e-05
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		2e-05
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		2e-05
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		2e-05
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-05
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-05
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-05
2qlu_A	314	Crystal Structure Of Activin Receptor Type Ii Kinas		2e-05
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		2e-05
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		2e-05
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		2e-05
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		2e-05
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		3e-05
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		3e-05
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		3e-05
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		3e-05
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		3e-05
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		3e-05
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		3e-05
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		4e-05
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		4e-05
3hng_A	360	Crystal Structure Of Vegfr1 In Complex With N-(4-ch		4e-05
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		5e-05
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		5e-05
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		6e-05
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		7e-05
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		7e-05
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		7e-05
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		8e-05
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		9e-05
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		9e-05
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		9e-05
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		9e-05
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		9e-05
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		1e-04
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		1e-04
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		1e-04
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		1e-04
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		1e-04
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		1e-04
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		1e-04
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		1e-04
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		2e-04
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		2e-04
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		2e-04
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		2e-04
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		2e-04
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		2e-04
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		2e-04
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		2e-04
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		2e-04
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		2e-04
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		2e-04
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		2e-04
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		2e-04
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		3e-04
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		3e-04
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		3e-04
1fvr_A	327	Tie2 Kinase Domain Length = 327		3e-04
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		3e-04
2pl0_A	289	Lck Bound To Imatinib Length = 289		3e-04
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		3e-04
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		3e-04
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		3e-04
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		3e-04
2h34_A	309	Apoenzyme Crystal Structure Of The Tuberculosis Ser		3e-04
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		3e-04
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		3e-04
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		4e-04
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		4e-04
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		4e-04
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		4e-04
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		4e-04
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		4e-04
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		4e-04
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		4e-04
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		4e-04
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		4e-04
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		4e-04
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		4e-04
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		4e-04
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		4e-04
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		4e-04
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		4e-04
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		4e-04
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		5e-04
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		5e-04
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		5e-04
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		5e-04
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		6e-04
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		6e-04
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		6e-04
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		6e-04
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		6e-04
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		6e-04
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		6e-04
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		7e-04
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		7e-04
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		7e-04
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		7e-04
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		7e-04
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		7e-04
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		7e-04
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		7e-04
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		7e-04
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		7e-04
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		7e-04
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		7e-04
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		7e-04
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		7e-04
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		7e-04
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		7e-04
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		7e-04
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		7e-04
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		7e-04
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		8e-04
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		8e-04
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		8e-04
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		8e-04
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		8e-04
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		8e-04
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		8e-04
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		8e-04
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		8e-04
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		9e-04
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		9e-04
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		9e-04

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 63.2 bits (152), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           +N+LLD+   A + DFG+AKL+  +D  +       TIG++AP EY   G+ S   DV+ 
Sbjct: 171 ANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA-VRGTIGHIAP-EYLSTGKSSEKTDVFG 228
Query: 62  FGIMLMEAFTRKKPTDEMF---SGEMTLKRWINDLLSVSVME-VVDANLLTREDRHFAAK 117
           +G+ML+E  T ++  D        ++ L  W+  LL    +E +VD +L          K
Sbjct: 229 YGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDL------QGNYK 282
Query: 118 QQCVSFVFNLAMECTIESPERRINAKEIVTEL 149
            + V  +  +A+ CT  SP  R    E+V  L
Sbjct: 283 DEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N+LLD+N V  ++DFGI+K     DQ+        T+GY+ P EY  +GR++   DVYSF
Sbjct: 169 NILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDP-EYFIKGRLTEKSDVYSF 227
Query: 63  GIMLMEAFTRKKPTDEMFSGEMT-LKRWINDLLSVSVME-VVDANLLTREDRHFAAKQQC 120
           G++L E    +    +    EM  L  W  +  +   +E +VD NL  +       + + 
Sbjct: 228 GVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADK------IRPES 281
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTEL 149
           +    + A++C   S E R +  +++ +L
Sbjct: 282 LRKFGDTAVKCLALSSEDRPSMGDVLWKL 310

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 75/152 (49%), Gaps = 12/152 (7%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           +N+LLD+   A + DFG+AKL+  +D  +        IG++AP EY   G+ S   DV+ 
Sbjct: 163 ANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA-VRGXIGHIAP-EYLSTGKSSEKTDVFG 220
Query: 62  FGIMLMEAFTRKKPTDEMF---SGEMTLKRWINDLLSVSVME-VVDANLLTREDRHFAAK 117
           +G+ML+E  T ++  D        ++ L  W+  LL    +E +VD +L          K
Sbjct: 221 YGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDL------QGNYK 274
Query: 118 QQCVSFVFNLAMECTIESPERRINAKEIVTEL 149
            + V  +  +A+ CT  SP  R    E+V  L
Sbjct: 275 DEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 59.7 bits (143), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N+LLD+N V  ++DFGI+K      Q+        T+GY+ P EY  +GR++   DVYSF
Sbjct: 169 NILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDP-EYFIKGRLTEKSDVYSF 227
Query: 63  GIMLMEAFTRKKPTDEMFSGEMT-LKRWINDLLSVSVME-VVDANLLTREDRHFAAKQQC 120
           G++L E    +    +    EM  L  W  +  +   +E +VD NL  +       + + 
Sbjct: 228 GVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADK------IRPES 281
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTEL 149
           +    + A++C   S E R +  +++ +L
Sbjct: 282 LRKFGDTAVKCLALSSEDRPSMGDVLWKL 310

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           +N+LLD+   A +SDFG+A+      Q++  ++ + T  YMAP      G ++   D+YS
Sbjct: 162 ANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAP--EALRGEITPKSDIYS 219
Query: 62  FGIMLMEAFTRKKPTDEMFSGEMTL 86
           FG++L+E  T     DE    ++ L
Sbjct: 220 FGVVLLEIITGLPAVDEHREPQLLL 244

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 20/147 (13%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+ D +   +SD G+ + +   D       +L  I +MAP E    G+ S + D++S+
Sbjct: 158 NVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAP-EAIMYGKFSIDSDIWSY 216
Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
           G++L E F+                  +      S  +VV+   + R  +       C +
Sbjct: 217 GVVLWEVFSYG----------------LQPYCGYSNQDVVE---MIRNRQVLPCPDDCPA 257
Query: 123 FVFNLAMECTIESPERRINAKEIVTEL 149
           +V+ L +EC  E P RR   K+I + L
Sbjct: 258 WVYALMIECWNEFPSRRPRFKDIHSRL 284

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 20/147 (13%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+ D +   +SD G+ + +   D       +L  I +MAP E    G+ S + D++S+
Sbjct: 175 NVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAP-EAIMYGKFSIDSDIWSY 233
Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
           G++L E F+                  +      S  +VV+   + R  +       C +
Sbjct: 234 GVVLWEVFSYG----------------LQPYCGYSNQDVVE---MIRNRQVLPCPDDCPA 274
Query: 123 FVFNLAMECTIESPERRINAKEIVTEL 149
           +V+ L +EC  E P RR   K+I + L
Sbjct: 275 WVYALMIECWNEFPSRRPRFKDIHSRL 301

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           +N+LLD+   A +SDFG+A+      Q++   + + T  YMAP      G ++   D+YS
Sbjct: 162 ANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAP--EALRGEITPKSDIYS 219
Query: 62  FGIMLMEAFTRKKPTDEMFSGEMTL 86
           FG++L+E  T     DE    ++ L
Sbjct: 220 FGVVLLEIITGLPAVDEHREPQLLL 244

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 23/153 (15%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N L+D ++   +SDFG+ + ++ +DQ ++   T   + + AP E     + S+  DV++F
Sbjct: 134 NCLVDRDLCVKVSDFGMTRYVL-DDQYVSSVGTKFPVKWSAP-EVFHYFKYSSKSDVWAF 191
Query: 63  GIMLMEAFTRKK-PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           GI++ E F+  K P D   + E+ LK             V   + L R   H A+     
Sbjct: 192 GILMWEVFSLGKMPYDLYTNSEVVLK-------------VSQGHRLYRP--HLASDT--- 233
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKIRD 154
             ++ +   C  E PE+R   +++++ +  +R+
Sbjct: 234 --IYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 20/150 (13%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N L+  N++  + DFG+++ +   D       T+  I +M P E     + +T  DV+SF
Sbjct: 163 NCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPP-ESIMYRKFTTESDVWSF 221
Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
           G++L E FT  K            + W   L +  V+E +    +    R       C  
Sbjct: 222 GVILWEIFTYGK------------QPWFQ-LSNTEVIECITQGRVLERPR------VCPK 262
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKI 152
            V+++ + C    P++R+N KEI   L  +
Sbjct: 263 EVYDVMLGCWQREPQQRLNIKEIYKILHAL 292

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           +N+LLD+   A +SDFG+A+      Q +   + + T  YMAP      G ++   D+YS
Sbjct: 156 ANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAP--EALRGEITPKSDIYS 213
Query: 62  FGIMLMEAFTRKKPTDEMFSGEMTL 86
           FG++L+E  T     DE    ++ L
Sbjct: 214 FGVVLLEIITGLPAVDEHREPQLLL 238

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           +N+LLD+   A +SDFG+A+      Q +  ++ + T  Y AP      G ++   D+YS
Sbjct: 153 ANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAP--EALRGEITPKSDIYS 210
Query: 62  FGIMLMEAFTRKKPTDEMFSGEMTL 86
           FG++L+E  T     DE    ++ L
Sbjct: 211 FGVVLLEIITGLPAVDEHREPQLLL 235

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 27/141 (19%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
           +N+L+ +N+V  ++DFG+A+L+  ED   T  Q     I + AP E    GR +   DV+
Sbjct: 140 ANILVGENLVCKVADFGLARLI--EDNEWTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 196
Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHF--AAKQ 118
           SFGI+L E  T+ +                     V    +V+  +L + +R +      
Sbjct: 197 SFGILLTELTTKGR---------------------VPYPGMVNREVLDQVERGYRMPCPP 235
Query: 119 QCVSFVFNLAMECTIESPERR 139
           +C   + +L  +C  + PE R
Sbjct: 236 ECPESLHDLMCQCWRKEPEER 256

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 27/141 (19%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
           +N+L+ +N+V  ++DFG+A+L+  ED   T  Q     I + AP E    GR +   DV+
Sbjct: 133 ANILVGENLVCKVADFGLARLI--EDNEXTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 189
Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHF--AAKQ 118
           SFGI+L E  T+ +                     V    +V+  +L + +R +      
Sbjct: 190 SFGILLTELTTKGR---------------------VPYPGMVNREVLDQVERGYRMPCPP 228
Query: 119 QCVSFVFNLAMECTIESPERR 139
           +C   + +L  +C  + PE R
Sbjct: 229 ECPESLHDLMCQCWRKEPEER 249

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 27/141 (19%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
           +N+L+ +N+V  ++DFG+A+L+  ED   T  Q     I + AP E    GR +   DV+
Sbjct: 140 ANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 196
Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHF--AAKQ 118
           SFGI+L E  T+ +                     V    +V+  +L + +R +      
Sbjct: 197 SFGILLTELTTKGR---------------------VPYPGMVNREVLDQVERGYRMPCPP 235
Query: 119 QCVSFVFNLAMECTIESPERR 139
           +C   + +L  +C  + PE R
Sbjct: 236 ECPESLHDLMCQCWRKEPEER 256

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 27/141 (19%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
           +N+L+ +N+V  ++DFG+A+L+  ED   T  Q     I + AP E    GR +   DV+
Sbjct: 136 ANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 192
Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHF--AAKQ 118
           SFGI+L E  T+ +                     V    +V+  +L + +R +      
Sbjct: 193 SFGILLTELTTKGR---------------------VPYPGMVNREVLDQVERGYRMPCPP 231
Query: 119 QCVSFVFNLAMECTIESPERR 139
           +C   + +L  +C  + PE R
Sbjct: 232 ECPESLHDLMCQCWRKEPEER 252

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 27/141 (19%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
           +N+L+ +N+V  ++DFG+A+L+  ED   T  Q     I + AP E    GR +   DV+
Sbjct: 134 ANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 190
Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHF--AAKQ 118
           SFGI+L E  T+ +                     V    +V+  +L + +R +      
Sbjct: 191 SFGILLTELTTKGR---------------------VPYPGMVNREVLDQVERGYRMPCPP 229
Query: 119 QCVSFVFNLAMECTIESPERR 139
           +C   + +L  +C  + PE R
Sbjct: 230 ECPESLHDLMCQCWRKDPEER 250

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQT-QTLATIGYMAPVEYGREGRVSTNGDV 59
           P N+L+D N    + DFGIAK L   + S+TQT   L T+ Y +P E  +        D+
Sbjct: 139 PQNILIDSNKTLKIFDFGIAKAL--SETSLTQTNHVLGTVQYFSP-EQAKGEATDECTDI 195
Query: 60  YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDL 93
           YS GI+L E    + P    F+GE  +   I  +
Sbjct: 196 YSIGIVLYEMLVGEPP----FNGETAVSIAIKHI 225

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 27/141 (19%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
           +N+L+ +N+V  ++DFG+A+L+  ED   T  Q     I + AP E    GR +   DV+
Sbjct: 143 ANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 199
Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHF--AAKQ 118
           SFGI+L E  T+ +                     V    +V+  +L + +R +      
Sbjct: 200 SFGILLTELTTKGR---------------------VPYPGMVNREVLDQVERGYRMPCPP 238
Query: 119 QCVSFVFNLAMECTIESPERR 139
           +C   + +L  +C  + PE R
Sbjct: 239 ECPESLHDLMCQCWRKDPEER 259

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 27/141 (19%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
           +N+L+ +N+V  ++DFG+A+L+  ED   T  Q     I + AP E    GR +   DV+
Sbjct: 143 ANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 199
Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHF--AAKQ 118
           SFGI+L E  T+ +                     V    +V+  +L + +R +      
Sbjct: 200 SFGILLTELTTKGR---------------------VPYPGMVNREVLDQVERGYRMPCPP 238
Query: 119 QCVSFVFNLAMECTIESPERR 139
           +C   + +L  +C  + PE R
Sbjct: 239 ECPESLHDLMCQCWRKDPEER 259

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 27/141 (19%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
           +N+L+ +N+V  ++DFG+A+L+  ED   T  Q     I + AP E    GR +   DV+
Sbjct: 132 ANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 188
Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHF--AAKQ 118
           SFGI+L E  T+ +                     V    +V+  +L + +R +      
Sbjct: 189 SFGILLTELTTKGR---------------------VPYPGMVNREVLDQVERGYRMPCPP 227
Query: 119 QCVSFVFNLAMECTIESPERR 139
           +C   + +L  +C  + PE R
Sbjct: 228 ECPESLHDLMCQCWRKDPEER 248

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 27/141 (19%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
           +N+L+ +N+V  ++DFG+A+L+  ED   T  Q     I + AP E    GR +   DV+
Sbjct: 143 ANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 199
Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHF--AAKQ 118
           SFGI+L E  T+ +                     V    +V+  +L + +R +      
Sbjct: 200 SFGILLTELTTKGR---------------------VPYPGMVNREVLDQVERGYRMPCPP 238
Query: 119 QCVSFVFNLAMECTIESPERR 139
           +C   + +L  +C  + PE R
Sbjct: 239 ECPESLHDLMCQCWRKDPEER 259

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 27/141 (19%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
           +N+L+ +N+V  ++DFG+A+L+  ED   T  Q     I + AP E    GR +   DV+
Sbjct: 143 ANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 199
Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHF--AAKQ 118
           SFGI+L E  T+ +                     V    +V+  +L + +R +      
Sbjct: 200 SFGILLTELTTKGR---------------------VPYPGMVNREVLDQVERGYRMPCPP 238
Query: 119 QCVSFVFNLAMECTIESPERR 139
           +C   + +L  +C  + PE R
Sbjct: 239 ECPESLHDLMCQCWRKDPEER 259

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 27/141 (19%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
           +N+L+ +N+V  ++DFG+A+L+  ED   T  Q     I + AP E    GR +   DV+
Sbjct: 143 ANILVGENLVCKVADFGLARLI--EDNEXTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 199
Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHF--AAKQ 118
           SFGI+L E  T+ +                     V    +V+  +L + +R +      
Sbjct: 200 SFGILLTELTTKGR---------------------VPYPGMVNREVLDQVERGYRMPCPP 238
Query: 119 QCVSFVFNLAMECTIESPERR 139
           +C   + +L  +C  + PE R
Sbjct: 239 ECPESLHDLMCQCWRKDPEER 259

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 27/141 (19%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
           +N+L+ +N+V  ++DFG+A+L+  ED   T  Q     I + AP E    GR +   DV+
Sbjct: 143 ANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 199
Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHF--AAKQ 118
           SFGI+L E  T+ +                     V    +V+  +L + +R +      
Sbjct: 200 SFGILLTELTTKGR---------------------VPYPGMVNREVLDQVERGYRMPCPP 238
Query: 119 QCVSFVFNLAMECTIESPERR 139
           +C   + +L  +C  + PE R
Sbjct: 239 ECPESLHDLMCQCWRKDPEER 259

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 27/141 (19%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
           +N+L+ +N+V  ++DFG+A+L+  ED   T  Q     I + AP E    GR +   DV+
Sbjct: 143 ANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 199
Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHF--AAKQ 118
           SFGI+L E  T+ +                     V    +V+  +L + +R +      
Sbjct: 200 SFGILLTELTTKGR---------------------VPYPGMVNREVLDQVERGYRMPCPP 238
Query: 119 QCVSFVFNLAMECTIESPERR 139
           +C   + +L  +C  + PE R
Sbjct: 239 ECPESLHDLMCQCWRKDPEER 259

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 27/141 (19%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
           +N+L+ +N+V  ++DFG+A+L+  ED   T  Q     I + AP E    GR +   DV+
Sbjct: 143 ANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 199
Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHF--AAKQ 118
           SFGI+L E  T+ +                     V    +V+  +L + +R +      
Sbjct: 200 SFGILLTELTTKGR---------------------VPYPGMVNREVLDQVERGYRMPCPP 238
Query: 119 QCVSFVFNLAMECTIESPERR 139
           +C   + +L  +C  + PE R
Sbjct: 239 ECPESLHDLMCQCWRKDPEER 259

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 27/141 (19%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
           +N+L+ +N+V  ++DFG+A+L+  ED   T  Q     I + AP E    GR +   DV+
Sbjct: 392 ANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 448
Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHF--AAKQ 118
           SFGI+L E  T+ +                     V    +V+  +L + +R +      
Sbjct: 449 SFGILLTELTTKGR---------------------VPYPGMVNREVLDQVERGYRMPCPP 487
Query: 119 QCVSFVFNLAMECTIESPERR 139
           +C   + +L  +C  + PE R
Sbjct: 488 ECPESLHDLMCQCWRKEPEER 508

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 27/141 (19%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
           +N+L+ +N+V  ++DFG+A+L+  ED   T  Q     I + AP E    GR +   DV+
Sbjct: 309 ANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 365
Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHF--AAKQ 118
           SFGI+L E  T+ +                     V    +V+  +L + +R +      
Sbjct: 366 SFGILLTELTTKGR---------------------VPYPGMVNREVLDQVERGYRMPCPP 404
Query: 119 QCVSFVFNLAMECTIESPERR 139
           +C   + +L  +C  + PE R
Sbjct: 405 ECPESLHDLMCQCWRKEPEER 425

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 27/141 (19%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
           +N+L+ +N+V  ++DFG+A+L+  ED   T  Q     I + AP E    GR +   DV+
Sbjct: 309 ANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 365
Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHF--AAKQ 118
           SFGI+L E  T+ +                     V    +V+  +L + +R +      
Sbjct: 366 SFGILLTELTTKGR---------------------VPYPGMVNREVLDQVERGYRMPCPP 404
Query: 119 QCVSFVFNLAMECTIESPERR 139
           +C   + +L  +C  + PE R
Sbjct: 405 ECPESLHDLMCQCWRKEPEER 425

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 27/141 (19%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
           +N+L+ +N+V  ++DFG+A+L+  ED   T  Q     I + AP E    GR +   DV+
Sbjct: 309 ANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 365
Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHF--AAKQ 118
           SFGI+L E  T+ +                     V    +V+  +L + +R +      
Sbjct: 366 SFGILLTELTTKGR---------------------VPYPGMVNREVLDQVERGYRMPCPP 404
Query: 119 QCVSFVFNLAMECTIESPERR 139
           +C   + +L  +C  + PE R
Sbjct: 405 ECPESLHDLMCQCWRKEPEER 425

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 27/141 (19%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
           +N+L+ +N+V  ++DFG+ +L+  ED   T  Q     I + AP E    GR +   DV+
Sbjct: 310 ANILVGENLVCKVADFGLGRLI--EDNEYTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 366
Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHF--AAKQ 118
           SFGI+L E  T+ +                     V    +V+  +L + +R +      
Sbjct: 367 SFGILLTELTTKGR---------------------VPYPGMVNREVLDQVERGYRMPCPP 405
Query: 119 QCVSFVFNLAMECTIESPERR 139
           +C   + +L  +C  + PE R
Sbjct: 406 ECPESLHDLMCQCWRKDPEER 426

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 22/151 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N L+ +N++  + DFG+++ +   D       T+  I +M P E     + +T  DV+S 
Sbjct: 158 NCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPP-ESIMYRKFTTESDVWSL 216
Query: 63  GIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G++L E FT  K+P  ++ + E              V+E +    + +  R       C 
Sbjct: 217 GVVLWEIFTYGKQPWYQLSNNE--------------VIECITQGRVLQRPR------TCP 256
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
             V+ L + C    P  R N K I T L  +
Sbjct: 257 QEVYELMLGCWQREPHMRKNIKGIHTLLQNL 287

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 20/158 (12%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N ++ ++    + DFG+ + +   D      + L  + +M+P E  ++G  +T  DV+SF
Sbjct: 162 NCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSP-ESLKDGVFTTYSDVWSF 220
Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
           G++L E  T  +   +  S E  L+             V++  LL + D        C  
Sbjct: 221 GVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD-------NCPD 261
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNV 160
            +F L   C   +P+ R +  EI++ + +  +  FR V
Sbjct: 262 MLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 299

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 25/140 (17%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
           +N+L+ + ++  ++DFG+A+L+  ED   T  Q     I + AP E    GR +   DV+
Sbjct: 134 ANILVGNGLICKIADFGLARLI--EDNEXTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 190
Query: 61  SFGIMLMEAFTRKK-PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQ 119
           SFGI+L E  T+ + P   M + E              V+E V+              Q 
Sbjct: 191 SFGILLTELVTKGRVPYPGMNNRE--------------VLEQVERGY------RMPCPQD 230
Query: 120 CVSFVFNLAMECTIESPERR 139
           C   +  L + C  + PE R
Sbjct: 231 CPISLHELMIHCWKKDPEER 250

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 6/69 (8%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+ ++ VA +SDFG+ K     + S TQ      + + AP E  RE + ST  DV+SF
Sbjct: 132 NVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAP-EALREKKFSTKSDVWSF 185
Query: 63  GIMLMEAFT 71
           GI+L E ++
Sbjct: 186 GILLWEIYS 194

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 71/156 (45%), Gaps = 31/156 (19%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVS-----TNG 57
           N+L++ N+V  +SDFG++++L  + ++     T  T G   P+ +     +S     +  
Sbjct: 177 NILVNSNLVCKVSDFGLSRVLEDDPEA-----TYTTSGGKIPIRWTAPEAISYRKFTSAS 231
Query: 58  DVYSFGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAA 116
           DV+SFGI++ E  T  ++P  E+ + E              VM+ ++             
Sbjct: 232 DVWSFGIVMWEVMTYGERPYWELSNHE--------------VMKAINDGF------RLPT 271
Query: 117 KQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
              C S ++ L M+C  +   RR    +IV+ L K+
Sbjct: 272 PMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 20/158 (12%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N ++ ++    + DFG+ + +   D      + L  + +M+P E  ++G  +T  DV+SF
Sbjct: 168 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP-ESLKDGVFTTYSDVWSF 226
Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
           G++L E  T  +   +  S E  L+             V++  LL + D        C  
Sbjct: 227 GVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD-------NCPD 267
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNV 160
            +F L   C   +P+ R +  EI++ + +  +  FR V
Sbjct: 268 MLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 305

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 20/158 (12%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N ++ ++    + DFG+ + +   D      + L  + +M+P E  ++G  +T  DV+SF
Sbjct: 162 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP-ESLKDGVFTTYSDVWSF 220
Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
           G++L E  T  +   +  S E  L+             V++  LL + D        C  
Sbjct: 221 GVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD-------NCPD 261
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNV 160
            +F L   C   +P+ R +  EI++ + +  +  FR V
Sbjct: 262 MLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 299

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 20/158 (12%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N ++ ++    + DFG+ + +   D      + L  + +M+P E  ++G  +T  DV+SF
Sbjct: 158 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP-ESLKDGVFTTYSDVWSF 216
Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
           G++L E  T  +   +  S E  L+             V++  LL + D        C  
Sbjct: 217 GVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD-------NCPD 257
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNV 160
            +F L   C   +P+ R +  EI++ + +  +  FR V
Sbjct: 258 MLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 295

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 20/158 (12%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N ++ ++    + DFG+ + +   D      + L  + +M+P E  ++G  +T  DV+SF
Sbjct: 168 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP-ESLKDGVFTTYSDVWSF 226
Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
           G++L E  T  +   +  S E  L+             V++  LL + D        C  
Sbjct: 227 GVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD-------NCPD 267
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNV 160
            +F L   C   +P+ R +  EI++ + +  +  FR V
Sbjct: 268 MLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 305

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 6/69 (8%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+ ++ VA +SDFG+ K     + S TQ      + + AP E  RE + ST  DV+SF
Sbjct: 319 NVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAP-EALREKKFSTKSDVWSF 372
Query: 63  GIMLMEAFT 71
           GI+L E ++
Sbjct: 373 GILLWEIYS 381

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 20/158 (12%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N ++ ++    + DFG+ + +   D      + L  + +M+P E  ++G  +T  DV+SF
Sbjct: 159 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP-ESLKDGVFTTYSDVWSF 217
Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
           G++L E  T  +   +  S E  L+             V++  LL + D        C  
Sbjct: 218 GVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD-------NCPD 258
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNV 160
            +F L   C   +P+ R +  EI++ + +  +  FR V
Sbjct: 259 MLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 296

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 20/158 (12%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N ++ ++    + DFG+ + +   D      + L  + +M+P E  ++G  +T  DV+SF
Sbjct: 155 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP-ESLKDGVFTTYSDVWSF 213
Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
           G++L E  T  +   +  S E  L+             V++  LL + D        C  
Sbjct: 214 GVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD-------NCPD 254
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNV 160
            +F L   C   +P+ R +  EI++ + +  +  FR V
Sbjct: 255 MLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 292

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 20/158 (12%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N ++ ++    + DFG+ + +   D      + L  + +M+P E  ++G  +T  DV+SF
Sbjct: 161 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP-ESLKDGVFTTYSDVWSF 219
Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
           G++L E  T  +   +  S E  L+             V++  LL + D        C  
Sbjct: 220 GVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD-------NCPD 260
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNV 160
            +F L   C   +P+ R +  EI++ + +  +  FR V
Sbjct: 261 MLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 298

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 20/158 (12%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N ++ ++    + DFG+ + +   D      + L  + +M+P E  ++G  +T  DV+SF
Sbjct: 161 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP-ESLKDGVFTTYSDVWSF 219
Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
           G++L E  T  +   +  S E  L+             V++  LL + D        C  
Sbjct: 220 GVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD-------NCPD 260
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNV 160
            +F L   C   +P+ R +  EI++ + +  +  FR V
Sbjct: 261 MLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 298

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 6/69 (8%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+ ++ VA +SDFG+ K     + S TQ      + + AP E  RE + ST  DV+SF
Sbjct: 147 NVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAP-EALREKKFSTKSDVWSF 200
Query: 63  GIMLMEAFT 71
           GI+L E ++
Sbjct: 201 GILLWEIYS 209

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQT-LATIGYMAPVEYGREGRVSTNGDV 59
           P+N+++       + DFGIA+ +     S+TQT   + T  Y++P E  R   V    DV
Sbjct: 144 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP-EQARGDSVDARSDV 202
Query: 60  YSFGIMLMEAFTRKKPTDEMFSGE 83
           YS G +L E  T + P    F+G+
Sbjct: 203 YSLGCVLYEVLTGEPP----FTGD 222

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQT-LATIGYMAPVEYGREGRVSTNGDV 59
           P+N+++       + DFGIA+ +     S+TQT   + T  Y++P E  R   V    DV
Sbjct: 144 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP-EQARGDSVDARSDV 202
Query: 60  YSFGIMLMEAFTRKKPTDEMFSGE 83
           YS G +L E  T + P    F+G+
Sbjct: 203 YSLGCVLYEVLTGEPP----FTGD 222

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQT-LATIGYMAPVEYGREGRVSTNGDV 59
           P+N+++       + DFGIA+ +     S+TQT   + T  Y++P E  R   V    DV
Sbjct: 144 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP-EQARGDSVDARSDV 202
Query: 60  YSFGIMLMEAFTRKKPTDEMFSGE 83
           YS G +L E  T + P    F+G+
Sbjct: 203 YSLGCVLYEVLTGEPP----FTGD 222

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQT-LATIGYMAPVEYGREGRVSTNGDV 59
           P+N+++       + DFGIA+ +     S+TQT   + T  Y++P E  R   V    DV
Sbjct: 144 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP-EQARGDSVDARSDV 202
Query: 60  YSFGIMLMEAFTRKKPTDEMFSGE 83
           YS G +L E  T + P    F+G+
Sbjct: 203 YSLGCVLYEVLTGEPP----FTGD 222

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 20/158 (12%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N ++ ++    + DFG+ + +   D      + L  + +M+P E  ++G  +T  DV+SF
Sbjct: 190 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP-ESLKDGVFTTYSDVWSF 248
Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
           G++L E  T  +   +  S E  L+             V++  LL + D        C  
Sbjct: 249 GVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD-------NCPD 289
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNV 160
            +F L   C   +P+ R +  EI++ + +  +  FR V
Sbjct: 290 MLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 327

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 23/154 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N L+ +N V  +SDFG+ + ++ +DQ  + T T   + + +P E     R S+  DV+SF
Sbjct: 133 NCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASP-EVFSFSRYSSKSDVWSF 190
Query: 63  GIMLMEAFTRKK-PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G+++ E F+  K P +   + E              V+E +       + R  +      
Sbjct: 191 GVLMWEVFSEGKIPYENRSNSE--------------VVEDISTGFRLYKPRLAS------ 230
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKIRDS 155
           + V+ +   C  E PE R     ++ +L++I +S
Sbjct: 231 THVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 264

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 23/154 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N L+ +N V  +SDFG+ + ++ +DQ  + T T   + + +P E     R S+  DV+SF
Sbjct: 136 NCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASP-EVFSFSRYSSKSDVWSF 193
Query: 63  GIMLMEAFTRKK-PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G+++ E F+  K P +   + E              V+E +       + R  +      
Sbjct: 194 GVLMWEVFSEGKIPYENRSNSE--------------VVEDISTGFRLYKPRLAS------ 233
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKIRDS 155
           + V+ +   C  E PE R     ++ +L++I +S
Sbjct: 234 THVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQT-LATIGYMAPVEYGREGRVSTNGDV 59
           P+N+++       + DFGIA+ +     S+TQT   + T  Y++P E  R   V    DV
Sbjct: 161 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP-EQARGDSVDARSDV 219
Query: 60  YSFGIMLMEAFTRKKPTDEMFSGE 83
           YS G +L E  T + P    F+G+
Sbjct: 220 YSLGCVLYEVLTGEPP----FTGD 239

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 23/154 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N L+ +N V  +SDFG+ + ++ +DQ  + T T   + + +P E     R S+  DV+SF
Sbjct: 131 NCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASP-EVFSFSRYSSKSDVWSF 188
Query: 63  GIMLMEAFTRKK-PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G+++ E F+  K P +   + E              V+E +       + R  +      
Sbjct: 189 GVLMWEVFSEGKIPYENRSNSE--------------VVEDISTGFRLYKPRLAS------ 228
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKIRDS 155
           + V+ +   C  E PE R     ++ +L++I +S
Sbjct: 229 THVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 262

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 23/154 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N L+ +N V  +SDFG+ + ++ +DQ  + T T   + + +P E     R S+  DV+SF
Sbjct: 134 NCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASP-EVFSFSRYSSKSDVWSF 191
Query: 63  GIMLMEAFTRKK-PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G+++ E F+  K P +   + E              V+E +       + R  +      
Sbjct: 192 GVLMWEVFSEGKIPYENRSNSE--------------VVEDISTGFRLYKPRLAS------ 231
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKIRDS 155
           + V+ +   C  E PE R     ++ +L++I +S
Sbjct: 232 THVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 23/154 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N L+ +N V  +SDFG+ + ++ +DQ  + T T   + + +P E     R S+  DV+SF
Sbjct: 153 NCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASP-EVFSFSRYSSKSDVWSF 210
Query: 63  GIMLMEAFTRKK-PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G+++ E F+  K P +   + E              V+E +       + R  +      
Sbjct: 211 GVLMWEVFSEGKIPYENRSNSE--------------VVEDISTGFRLYKPRLAS------ 250
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKIRDS 155
           + V+ +   C  E PE R     ++ +L++I +S
Sbjct: 251 THVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 284

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIG-EDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           NVLL     A +SDFG++K L   E+    QT     + + AP E     + S+  DV+S
Sbjct: 137 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP-ECINYYKFSSKSDVWS 195
Query: 62  FGIMLMEAFTR-KKPTDEMFSGEMT 85
           FG+++ EAF+  +KP   M   E+T
Sbjct: 196 FGVLMWEAFSYGQKPYRGMKGSEVT 220

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIG-EDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           NVLL     A +SDFG++K L   E+    QT     + + AP E     + S+  DV+S
Sbjct: 141 NVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAP-ECINYYKFSSKSDVWS 199
Query: 62  FGIMLMEAFTR-KKPTDEMFSGEMT 85
           FG+++ EAF+  +KP   M   E+T
Sbjct: 200 FGVLMWEAFSYGQKPYRGMKGSEVT 224

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIG-EDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           NVLL     A +SDFG++K L   E+    QT     + + AP E     + S+  DV+S
Sbjct: 157 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP-ECINYYKFSSKSDVWS 215
Query: 62  FGIMLMEAFTR-KKPTDEMFSGEMT 85
           FG+++ EAF+  +KP   M   E+T
Sbjct: 216 FGVLMWEAFSYGQKPYRGMKGSEVT 240

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIG-EDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           NVLL     A +SDFG++K L   E+    QT     + + AP E     + S+  DV+S
Sbjct: 157 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP-ECINYYKFSSKSDVWS 215
Query: 62  FGIMLMEAFTR-KKPTDEMFSGEMT 85
           FG+++ EAF+  +KP   M   E+T
Sbjct: 216 FGVLMWEAFSYGQKPYRGMKGSEVT 240

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIG-EDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           NVLL     A +SDFG++K L   E+    QT     + + AP E     + S+  DV+S
Sbjct: 155 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP-ECINYYKFSSKSDVWS 213
Query: 62  FGIMLMEAFTR-KKPTDEMFSGEMT 85
           FG+++ EAF+  +KP   M   E+T
Sbjct: 214 FGVLMWEAFSYGQKPYRGMKGSEVT 238

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIG-EDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           NVLL     A +SDFG++K L   E+    QT     + + AP E     + S+  DV+S
Sbjct: 147 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP-ECINYYKFSSKSDVWS 205
Query: 62  FGIMLMEAFTR-KKPTDEMFSGEMT 85
           FG+++ EAF+  +KP   M   E+T
Sbjct: 206 FGVLMWEAFSYGQKPYRGMKGSEVT 230

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIG-EDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           NVLL     A +SDFG++K L   E+    QT     + + AP E     + S+  DV+S
Sbjct: 141 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP-ECINYYKFSSKSDVWS 199
Query: 62  FGIMLMEAFTR-KKPTDEMFSGEMT 85
           FG+++ EAF+  +KP   M   E+T
Sbjct: 200 FGVLMWEAFSYGQKPYRGMKGSEVT 224

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIG-EDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           NVLL     A +SDFG++K L   E+    QT     + + AP E     + S+  DV+S
Sbjct: 135 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP-ECINYYKFSSKSDVWS 193
Query: 62  FGIMLMEAFTR-KKPTDEMFSGEMT 85
           FG+++ EAF+  +KP   M   E+T
Sbjct: 194 FGVLMWEAFSYGQKPYRGMKGSEVT 218

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N L+ +N V  +SDFG+ + ++ +DQ  + T T   + + +P E     R S+  DV+SF
Sbjct: 133 NCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASP-EVFSFSRYSSKSDVWSF 190
Query: 63  GIMLMEAFTRKK 74
           G+++ E F+  K
Sbjct: 191 GVLMWEVFSEGK 202

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+ ++ VA +SDFG+ K     + S TQ      + + AP E  RE   ST  DV+SF
Sbjct: 138 NVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAP-EALREAAFSTKSDVWSF 191
Query: 63  GIMLMEAFT 71
           GI+L E ++
Sbjct: 192 GILLWEIYS 200

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQT-LATIGYMAPVEYGREGRVSTNGDV 59
           P+N+L+       + DFGIA+ +     S+ QT   + T  Y++P E  R   V    DV
Sbjct: 144 PANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSP-EQARGDSVDARSDV 202
Query: 60  YSFGIMLMEAFTRKKPTDEMFSGE 83
           YS G +L E  T + P    F+G+
Sbjct: 203 YSLGCVLYEVLTGEPP----FTGD 222

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 22/152 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA--TIGYMAPVEYGREGRVSTNGDVY 60
           N +LD+     ++DFG+A+ +  ++      +T A   + +MA +E  +  + +T  DV+
Sbjct: 162 NCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMA-LESLQTQKFTTKSDVW 220
Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           SFG++L E  TR  P                       +   D  +   + R     + C
Sbjct: 221 SFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYC 261
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
              ++ + ++C     E R +  E+V+ +S I
Sbjct: 262 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 293

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 63/150 (42%), Gaps = 20/150 (13%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N L+   +V  + DFG+++ +   D      +T+  I +M P E     + +T  DV+SF
Sbjct: 159 NCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPP-ESILYRKFTTESDVWSF 217
Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
           G++L E FT  K            + W      +S  E +D      + R     + C  
Sbjct: 218 GVVLWEIFTYGK------------QPWYQ----LSNTEAIDC---ITQGRELERPRACPP 258
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKI 152
            V+ +   C    P++R + K++   L  +
Sbjct: 259 EVYAIMRGCWQREPQQRHSIKDVHARLQAL 288

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIG-EDQSMTQTQTLATIGYMAP--VEYGREGRVSTNGDV 59
           NVLL     A +SDFG++K L   E+    QT     + + AP  + Y +    S+  DV
Sbjct: 499 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK---FSSKSDV 555
Query: 60  YSFGIMLMEAFTR-KKPTDEMFSGEMT 85
           +SFG+++ EAF+  +KP   M   E+T
Sbjct: 556 WSFGVLMWEAFSYGQKPYRGMKGSEVT 582

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 63/150 (42%), Gaps = 20/150 (13%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N L+   +V  + DFG+++ +   D      +T+  I +M P E     + +T  DV+SF
Sbjct: 165 NCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPP-ESILYRKFTTESDVWSF 223
Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
           G++L E FT  K            + W      +S  E +D      + R     + C  
Sbjct: 224 GVVLWEIFTYGK------------QPWYQ----LSNTEAIDC---ITQGRELERPRACPP 264
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKI 152
            V+ +   C    P++R + K++   L  +
Sbjct: 265 EVYAIMRGCWQREPQQRHSIKDVHARLQAL 294

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 63/150 (42%), Gaps = 20/150 (13%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N L+   +V  + DFG+++ +   D      +T+  I +M P E     + +T  DV+SF
Sbjct: 188 NCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPP-ESILYRKFTTESDVWSF 246
Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
           G++L E FT  K            + W      +S  E +D      + R     + C  
Sbjct: 247 GVVLWEIFTYGK------------QPWYQ----LSNTEAIDC---ITQGRELERPRACPP 287
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKI 152
            V+ +   C    P++R + K++   L  +
Sbjct: 288 EVYAIMRGCWQREPQQRHSIKDVHARLQAL 317

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 21/154 (13%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVLL       ++DFG+A LL  +D+ +  ++    I +MA +E    G+ +   DV+S+
Sbjct: 163 NVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA-LESIHFGKYTHQSDVWSY 221
Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
           G+ + E  T      E ++G             + + EV D  LL + +R  A  Q C  
Sbjct: 222 GVTVWELMTFGA---EPYAG-------------LRLAEVPD--LLEKGER-LAQPQICTI 262
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKI-RDS 155
            V+ + ++C +     R   KE+  E +++ RD 
Sbjct: 263 DVYMVMVKCWMIDENIRPTFKELANEFTRMARDP 296

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIG-EDQSMTQTQTLATIGYMAP--VEYGREGRVSTNGDV 59
           NVLL     A +SDFG++K L   E+    QT     + + AP  + Y +    S+  DV
Sbjct: 500 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK---FSSKSDV 556
Query: 60  YSFGIMLMEAFTR-KKPTDEMFSGEMT 85
           +SFG+++ EAF+  +KP   M   E+T
Sbjct: 557 WSFGVLMWEAFSYGQKPYRGMKGSEVT 583

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 22/152 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA--TIGYMAPVEYGREGRVSTNGDVY 60
           N +LD+     ++DFG+A+ +  ++      +T A   + +MA +E  +  + +T  DV+
Sbjct: 182 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA-LESLQTQKFTTKSDVW 240
Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           SFG++L E  TR  P                       +   D  +   + R     + C
Sbjct: 241 SFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYC 281
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
              ++ + ++C     E R +  E+V+ +S I
Sbjct: 282 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 313

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 22/152 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA--TIGYMAPVEYGREGRVSTNGDVY 60
           N +LD+     ++DFG+A+ +  ++      +T A   + +MA +E  +  + +T  DV+
Sbjct: 181 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA-LESLQTQKFTTKSDVW 239
Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           SFG++L E  TR  P                       +   D  +   + R     + C
Sbjct: 240 SFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYC 280
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
              ++ + ++C     E R +  E+V+ +S I
Sbjct: 281 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 312

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 22/152 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA--TIGYMAPVEYGREGRVSTNGDVY 60
           N +LD+     ++DFG+A+ ++ ++      +T A   + +MA +E  +  + +T  DV+
Sbjct: 164 NCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMA-LESLQTQKFTTKSDVW 222
Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           SFG++L E  TR  P                       +   D  +   + R     + C
Sbjct: 223 SFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYC 263
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
              ++ + ++C     E R +  E+V+ +S I
Sbjct: 264 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 295

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 22/152 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA--TIGYMAPVEYGREGRVSTNGDVY 60
           N +LD+     ++DFG+A+ +  ++      +T A   + +MA +E  +  + +T  DV+
Sbjct: 163 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA-LESLQTQKFTTKSDVW 221
Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           SFG++L E  TR  P                       +   D  +   + R     + C
Sbjct: 222 SFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYC 262
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
              ++ + ++C     E R +  E+V+ +S I
Sbjct: 263 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 22/152 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA--TIGYMAPVEYGREGRVSTNGDVY 60
           N +LD+     ++DFG+A+ +  ++      +T A   + +MA +E  +  + +T  DV+
Sbjct: 163 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA-LESLQTQKFTTKSDVW 221
Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           SFG++L E  TR  P                       +   D  +   + R     + C
Sbjct: 222 SFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYC 262
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
              ++ + ++C     E R +  E+V+ +S I
Sbjct: 263 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 22/152 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA--TIGYMAPVEYGREGRVSTNGDVY 60
           N +LD+     ++DFG+A+ +  ++      +T A   + +MA +E  +  + +T  DV+
Sbjct: 155 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA-LESLQTQKFTTKSDVW 213
Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           SFG++L E  TR  P                       +   D  +   + R     + C
Sbjct: 214 SFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYC 254
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
              ++ + ++C     E R +  E+V+ +S I
Sbjct: 255 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 286

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 22/152 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA--TIGYMAPVEYGREGRVSTNGDVY 60
           N +LD+     ++DFG+A+ +  ++      +T A   + +MA +E  +  + +T  DV+
Sbjct: 158 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA-LESLQTQKFTTKSDVW 216
Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           SFG++L E  TR  P                       +   D  +   + R     + C
Sbjct: 217 SFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYC 257
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
              ++ + ++C     E R +  E+V+ +S I
Sbjct: 258 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 289

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 22/152 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA--TIGYMAPVEYGREGRVSTNGDVY 60
           N +LD+     ++DFG+A+ +  ++      +T A   + +MA +E  +  + +T  DV+
Sbjct: 162 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA-LESLQTQKFTTKSDVW 220
Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           SFG++L E  TR  P                       +   D  +   + R     + C
Sbjct: 221 SFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYC 261
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
              ++ + ++C     E R +  E+V+ +S I
Sbjct: 262 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 293

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 22/152 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA--TIGYMAPVEYGREGRVSTNGDVY 60
           N +LD+     ++DFG+A+ +  ++      +T A   + +MA +E  +  + +T  DV+
Sbjct: 161 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA-LESLQTQKFTTKSDVW 219
Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           SFG++L E  TR  P                       +   D  +   + R     + C
Sbjct: 220 SFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYC 260
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
              ++ + ++C     E R +  E+V+ +S I
Sbjct: 261 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 292

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 22/152 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA--TIGYMAPVEYGREGRVSTNGDVY 60
           N +LD+     ++DFG+A+ +  ++      +T A   + +MA +E  +  + +T  DV+
Sbjct: 160 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA-LESLQTQKFTTKSDVW 218
Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           SFG++L E  TR  P                       +   D  +   + R     + C
Sbjct: 219 SFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYC 259
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
              ++ + ++C     E R +  E+V+ +S I
Sbjct: 260 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 291

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P N+LLD+     L+DFG++K  I  D          T+ YMAP    R+G  S + D +
Sbjct: 158 PENILLDEEGHIKLTDFGLSKEAI--DHEKKAYSFCGTVEYMAPEVVNRQGH-SHSADWW 214
Query: 61  SFGIMLMEAFTRKKP 75
           S+G+++ E  T   P
Sbjct: 215 SYGVLMFEMLTGSLP 229

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 21/154 (13%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVLL       ++DFG+A LL  +D+ +  ++    I +MA +E    G+ +   DV+S+
Sbjct: 145 NVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA-LESIHFGKYTHQSDVWSY 203
Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
           G+ + E  T      E ++G             + + EV D  LL + +R  A  Q C  
Sbjct: 204 GVTVWELMTFGA---EPYAG-------------LRLAEVPD--LLEKGER-LAQPQICTI 244
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKI-RDS 155
            V+ + ++C +     R   KE+  E +++ RD 
Sbjct: 245 DVYMVMVKCWMIDENIRPTFKELANEFTRMARDP 278

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 46.2 bits (108), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 76/162 (46%), Gaps = 27/162 (16%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPVEYGREGRVSTNGDVYS 61
           N+L++ N+V  +SDFG+A++L  + ++   T+     I + +P       + ++  DV+S
Sbjct: 177 NILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR-KFTSASDVWS 235
Query: 62  FGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           +GI+L E  +  ++P  EM + +              V++ VD      E         C
Sbjct: 236 YGIVLWEVMSYGERPYWEMSNQD--------------VIKAVD------EGYRLPPPMDC 275
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNVGA 162
            + ++ L ++C  +    R   ++IV+    I D L RN G+
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPGS 313

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 34/157 (21%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTN-GDVYS 61
           NVL+ +N V  ++DFG+A+ +   D     T     + +MAP       RV T+  DV+S
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAP--EALFDRVYTHQSDVWS 244
Query: 62  FGIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA 115
           FG+++ E FT         P +E+F                          L +E     
Sbjct: 245 FGVLMWEIFTLGGSPYPGIPVEELFK-------------------------LLKEGHRMD 279
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
               C + ++ +  +C    P +R   K++V +L +I
Sbjct: 280 KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/160 (21%), Positives = 65/160 (40%), Gaps = 28/160 (17%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYG-----REGRVSTNG 57
           N +LD++    ++DFG+A+ ++  +    Q    A +    PV++      +  R +T  
Sbjct: 154 NCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL----PVKWTALESLQTYRFTTKS 209
Query: 58  DVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAK 117
           DV+SFG++L E  TR  P            R I+           D      + R     
Sbjct: 210 DVWSFGVLLWELLTRGAPP----------YRHIDPF---------DLTHFLAQGRRLPQP 250
Query: 118 QQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLF 157
           + C   ++ +  +C    P  R   + +V E+ +I  +L 
Sbjct: 251 EYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALL 290

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 34/157 (21%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTN-GDVYS 61
           NVL+ +N V  ++DFG+A+ +   D     T     + +MAP       RV T+  DV+S
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALF--DRVYTHQSDVWS 244
Query: 62  FGIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA 115
           FG+++ E FT         P +E+F                          L +E     
Sbjct: 245 FGVLMWEIFTLGGSPYPGIPVEELFK-------------------------LLKEGHRMD 279
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
               C + ++ +  +C    P +R   K++V +L +I
Sbjct: 280 KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/158 (22%), Positives = 69/158 (43%), Gaps = 20/158 (12%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N ++ ++    + DFG+ + +   D      + L  + +M+P E  ++G  +T  DV+SF
Sbjct: 153 NCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSP-ESLKDGVFTTYSDVWSF 211
Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
           G++L E  T  +   +  S E  L+             V++  LL + D        C  
Sbjct: 212 GVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD-------NCPD 252
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNV 160
            +  L   C   +P+ R +  EI++ + +  +  FR V
Sbjct: 253 MLLELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 290

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 34/157 (21%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTN-GDVYS 61
           NVL+ +N V  ++DFG+A+ +   D     T     + +MAP       RV T+  DV+S
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPE--ALFDRVYTHQSDVWS 244
Query: 62  FGIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA 115
           FG+++ E FT         P +E+F                          L +E     
Sbjct: 245 FGVLMWEIFTLGGSPYPGIPVEELFK-------------------------LLKEGHRMD 279
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
               C + ++ +  +C    P +R   K++V +L +I
Sbjct: 280 KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 34/157 (21%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTN-GDVYS 61
           NVL+ +N V  ++DFG+A+ +   D     T     + +MAP       RV T+  DV+S
Sbjct: 187 NVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPE--ALFDRVYTHQSDVWS 244
Query: 62  FGIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA 115
           FG+++ E FT         P +E+F                          L +E     
Sbjct: 245 FGVLMWEIFTLGGSPYPGIPVEELFK-------------------------LLKEGHRMD 279
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
               C + ++ +  +C    P +R   K++V +L +I
Sbjct: 280 KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 22/152 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA--TIGYMAPVEYGREGRVSTNGDVY 60
           N +LD+     ++DFG+A+ +  ++      +T A   + +MA +E  +  + +T  DV+
Sbjct: 163 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA-LESLQTQKFTTKSDVW 221
Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           SFG++L E  TR  P                       +   D  +   + R     + C
Sbjct: 222 SFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYC 262
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
              ++ + ++C     E R +  E+V+ +S I
Sbjct: 263 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 22/152 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA--TIGYMAPVEYGREGRVSTNGDVY 60
           N +LD+     ++DFG+A+ +  ++      +T A   + +MA +E  +  + +T  DV+
Sbjct: 161 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA-LESLQTQKFTTKSDVW 219
Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           SFG++L E  TR  P                       +   D  +   + R     + C
Sbjct: 220 SFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYC 260
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
              ++ + ++C     E R +  E+V+ +S I
Sbjct: 261 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 292

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 22/152 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA--TIGYMAPVEYGREGRVSTNGDVY 60
           N +LD+     ++DFG+A+ +  ++      +T A   + +MA +E  +  + +T  DV+
Sbjct: 168 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA-LESLQTQKFTTKSDVW 226
Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           SFG++L E  TR  P                       +   D  +   + R     + C
Sbjct: 227 SFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYC 267
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
              ++ + ++C     E R +  E+V+ +S I
Sbjct: 268 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 299

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 22/152 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA--TIGYMAPVEYGREGRVSTNGDVY 60
           N +LD+     ++DFG+A+ +  ++      +T A   + +MA +E  +  + +T  DV+
Sbjct: 164 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA-LESLQTQKFTTKSDVW 222
Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           SFG++L E  TR  P                       +   D  +   + R     + C
Sbjct: 223 SFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYC 263
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
              ++ + ++C     E R +  E+V+ +S I
Sbjct: 264 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 295

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 22/152 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA--TIGYMAPVEYGREGRVSTNGDVY 60
           N +LD+     ++DFG+A+ +  ++      +T A   + +MA +E  +  + +T  DV+
Sbjct: 163 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA-LESLQTQKFTTKSDVW 221
Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           SFG++L E  TR  P                       +   D  +   + R     + C
Sbjct: 222 SFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYC 262
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
              ++ + ++C     E R +  E+V+ +S I
Sbjct: 263 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 34/157 (21%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTN-GDVYS 61
           NVL+ +N V  ++DFG+A+ +   D     T     + +MAP       RV T+  DV+S
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE--ALFDRVYTHQSDVWS 244
Query: 62  FGIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA 115
           FG+++ E FT         P +E+F                          L +E     
Sbjct: 245 FGVLMWEIFTLGGSPYPGIPVEELFK-------------------------LLKEGHRMD 279
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
               C + ++ +  +C    P +R   K++V +L +I
Sbjct: 280 KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 34/157 (21%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTN-GDVYS 61
           NVL+ +N V  ++DFG+A+ +   D     T     + +MAP       RV T+  DV+S
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE--ALFDRVYTHQSDVWS 244
Query: 62  FGIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA 115
           FG+++ E FT         P +E+F                          L +E     
Sbjct: 245 FGVLMWEIFTLGGSPYPGIPVEELFK-------------------------LLKEGHRMD 279
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
               C + ++ +  +C    P +R   K++V +L +I
Sbjct: 280 KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 22/152 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA--TIGYMAPVEYGREGRVSTNGDVY 60
           N +LD+     ++DFG+A+ +  ++      +T A   + +MA +E  +  + +T  DV+
Sbjct: 222 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA-LESLQTQKFTTKSDVW 280
Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           SFG++L E  TR  P                       +   D  +   + R     + C
Sbjct: 281 SFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYC 321
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
              ++ + ++C     E R +  E+V+ +S I
Sbjct: 322 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 353

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 34/157 (21%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTN-GDVYS 61
           NVL+ +N V  ++DFG+A+ +   D     T     + +MAP       RV T+  DV+S
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE--ALFDRVYTHQSDVWS 244
Query: 62  FGIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA 115
           FG+++ E FT         P +E+F                          L +E     
Sbjct: 245 FGVLMWEIFTLGGSPYPGIPVEELFK-------------------------LLKEGHRMD 279
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
               C + ++ +  +C    P +R   K++V +L +I
Sbjct: 280 KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 34/157 (21%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTN-GDVYS 61
           NVL+ +N V  ++DFG+A+ +   D     T     + +MAP       RV T+  DV+S
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE--ALFDRVYTHQSDVWS 244
Query: 62  FGIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA 115
           FG+++ E FT         P +E+F                          L +E     
Sbjct: 245 FGVLMWEIFTLGGSPYPGIPVEELFK-------------------------LLKEGHRMD 279
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
               C + ++ +  +C    P +R   K++V +L +I
Sbjct: 280 KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 34/157 (21%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTN-GDVYS 61
           NVL+ +N V  ++DFG+A+ +   D     T     + +MAP       RV T+  DV+S
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE--ALFDRVYTHQSDVWS 244
Query: 62  FGIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA 115
           FG+++ E FT         P +E+F                          L +E     
Sbjct: 245 FGVLMWEIFTLGGSPYPGIPVEELFK-------------------------LLKEGHRMD 279
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
               C + ++ +  +C    P +R   K++V +L +I
Sbjct: 280 KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 34/157 (21%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTN-GDVYS 61
           NVL+ +N V  ++DFG+A+ +   D     T     + +MAP       RV T+  DV+S
Sbjct: 179 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE--ALFDRVYTHQSDVWS 236
Query: 62  FGIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA 115
           FG+++ E FT         P +E+F                          L +E     
Sbjct: 237 FGVLMWEIFTLGGSPYPGIPVEELFK-------------------------LLKEGHRMD 271
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
               C + ++ +  +C    P +R   K++V +L +I
Sbjct: 272 KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 308

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 34/157 (21%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTN-GDVYS 61
           NVL+ +N V  ++DFG+A+ +   D     T     + +MAP       RV T+  DV+S
Sbjct: 174 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE--ALFDRVYTHQSDVWS 231
Query: 62  FGIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA 115
           FG+++ E FT         P +E+F                          L +E     
Sbjct: 232 FGVLMWEIFTLGGSPYPGIPVEELFK-------------------------LLKEGHRMD 266
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
               C + ++ +  +C    P +R   K++V +L +I
Sbjct: 267 KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 303

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P N+LLD+     L+DFG++K  I  D          T+ YMAP    R G  + + D +
Sbjct: 155 PENILLDEEGHIKLTDFGLSKESI--DHEKKAYSFCGTVEYMAPEVVNRRGH-TQSADWW 211
Query: 61  SFGIMLMEAFTRKKP 75
           SFG+++ E  T   P
Sbjct: 212 SFGVLMFEMLTGTLP 226

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P N+LLD+     L+DFG++K  I  D          T+ YMAP    R G  + + D +
Sbjct: 154 PENILLDEEGHIKLTDFGLSKESI--DHEKKAYSFCGTVEYMAPEVVNRRGH-TQSADWW 210
Query: 61  SFGIMLMEAFTRKKP 75
           SFG+++ E  T   P
Sbjct: 211 SFGVLMFEMLTGTLP 225

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 34/157 (21%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTN-GDVYS 61
           NVL+ +N V  ++DFG+A+ +   D     T     + +MAP       RV T+  DV+S
Sbjct: 176 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE--ALFDRVYTHQSDVWS 233
Query: 62  FGIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA 115
           FG+++ E FT         P +E+F                          L +E     
Sbjct: 234 FGVLMWEIFTLGGSPYPGIPVEELFK-------------------------LLKEGHRMD 268
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
               C + ++ +  +C    P +R   K++V +L +I
Sbjct: 269 KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 305

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P N+LLD+     L+DFG++K  I  D          T+ YMAP    R G  + + D +
Sbjct: 154 PENILLDEEGHIKLTDFGLSKESI--DHEKKAYSFCGTVEYMAPEVVNRRGH-TQSADWW 210
Query: 61  SFGIMLMEAFTRKKP 75
           SFG+++ E  T   P
Sbjct: 211 SFGVLMFEMLTGTLP 225

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 34/157 (21%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTN-GDVYS 61
           NVL+ +N V  ++DFG+A+ +   D     T     + +MAP       RV T+  DV+S
Sbjct: 233 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF--DRVYTHQSDVWS 290
Query: 62  FGIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA 115
           FG+++ E FT         P +E+F                          L +E     
Sbjct: 291 FGVLMWEIFTLGGSPYPGIPVEELFK-------------------------LLKEGHRMD 325
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
               C + ++ +  +C    P +R   K++V +L +I
Sbjct: 326 KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 27/162 (16%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPVEYGREGRVSTNGDVYS 61
           N+L++ N+V  +SDFG++++L  + ++   T+     I + +P       + ++  DV+S
Sbjct: 177 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR-KFTSASDVWS 235
Query: 62  FGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           +GI+L E  +  ++P  EM + +              V++ VD      E         C
Sbjct: 236 YGIVLWEVMSYGERPYWEMSNQD--------------VIKAVD------EGYRLPPPMDC 275
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNVGA 162
            + ++ L ++C  +    R   ++IV+    I D L RN G+
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPGS 313

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 27/162 (16%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPVEYGREGRVSTNGDVYS 61
           N+L++ N+V  +SDFG++++L  + ++   T+     I + +P       + ++  DV+S
Sbjct: 175 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR-KFTSASDVWS 233
Query: 62  FGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           +GI+L E  +  ++P  EM + +              V++ VD      E         C
Sbjct: 234 YGIVLWEVMSYGERPYWEMSNQD--------------VIKAVD------EGYRLPPPMDC 273
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNVGA 162
            + ++ L ++C  +    R   ++IV+    I D L RN G+
Sbjct: 274 PAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPGS 311

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 27/162 (16%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPVEYGREGRVSTNGDVYS 61
           N+L++ N+V  +SDFG++++L  + ++   T+     I + +P       + ++  DV+S
Sbjct: 148 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR-KFTSASDVWS 206
Query: 62  FGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           +GI+L E  +  ++P  EM + +              V++ VD      E         C
Sbjct: 207 YGIVLWEVMSYGERPYWEMSNQD--------------VIKAVD------EGYRLPPPMDC 246
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNVGA 162
            + ++ L ++C  +    R   ++IV+    I D L RN G+
Sbjct: 247 PAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPGS 284

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 27/162 (16%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPVEYGREGRVSTNGDVYS 61
           N+L++ N+V  +SDFG++++L  + ++   T+     I + +P       + ++  DV+S
Sbjct: 177 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR-KFTSASDVWS 235
Query: 62  FGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           +GI+L E  +  ++P  EM + +              V++ VD      E         C
Sbjct: 236 YGIVLWEVMSYGERPYWEMSNQD--------------VIKAVD------EGYRLPPPMDC 275
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNVGA 162
            + ++ L ++C  +    R   ++IV+    I D L RN G+
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPGS 313

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 27/162 (16%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPVEYGREGRVSTNGDVYS 61
           N+L++ N+V  +SDFG++++L  + ++   T+     I + +P       + ++  DV+S
Sbjct: 177 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR-KFTSASDVWS 235
Query: 62  FGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           +GI+L E  +  ++P  EM + +              V++ VD      E         C
Sbjct: 236 YGIVLWEVMSYGERPYWEMSNQD--------------VIKAVD------EGYRLPPPMDC 275
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNVGA 162
            + ++ L ++C  +    R   ++IV+    I D L RN G+
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPGS 313

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 27/162 (16%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPVEYGREGRVSTNGDVYS 61
           N+L++ N+V  +SDFG++++L  + ++   T+     I + +P       + ++  DV+S
Sbjct: 177 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR-KFTSASDVWS 235
Query: 62  FGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           +GI+L E  +  ++P  EM + +              V++ VD      E         C
Sbjct: 236 YGIVLWEVMSYGERPYWEMSNQD--------------VIKAVD------EGYRLPPPMDC 275
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNVGA 162
            + ++ L ++C  +    R   ++IV+    I D L RN G+
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPGS 313

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 27/162 (16%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPVEYGREGRVSTNGDVYS 61
           N+L++ N+V  +SDFG++++L  + ++   T+     I + +P       + ++  DV+S
Sbjct: 148 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR-KFTSASDVWS 206
Query: 62  FGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           +GI+L E  +  ++P  EM + +              V++ VD      E         C
Sbjct: 207 YGIVLWEVMSYGERPYWEMSNQD--------------VIKAVD------EGYRLPPPMDC 246
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNVGA 162
            + ++ L ++C  +    R   ++IV+    I D L RN G+
Sbjct: 247 PAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPGS 284

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 25/140 (17%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
           +N+L+  ++V  ++DFG+A+++  ED   T  +     I + AP E    G  +   DV+
Sbjct: 140 ANILVSASLVCKIADFGLARVI--EDNEYTAREGAKFPIKWTAP-EAINFGSFTIKSDVW 196
Query: 61  SFGIMLMEAFTRKK-PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQ 119
           SFGI+LME  T  + P   M                 S  EV+ A  L R  R     + 
Sbjct: 197 SFGILLMEIVTYGRIPYPGM-----------------SNPEVIRA--LERGYR-MPRPEN 236
Query: 120 CVSFVFNLAMECTIESPERR 139
           C   ++N+ M C    PE R
Sbjct: 237 CPEELYNIMMRCWKNRPEER 256

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 27/162 (16%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPVEYGREGRVSTNGDVYS 61
           N+L++ N+V  +SDFG++++L  + ++   T+     I + +P       + ++  DV+S
Sbjct: 165 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR-KFTSASDVWS 223
Query: 62  FGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           +GI+L E  +  ++P  EM + +              V++ VD      E         C
Sbjct: 224 YGIVLWEVMSYGERPYWEMSNQD--------------VIKAVD------EGYRLPPPMDC 263
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNVGA 162
            + ++ L ++C  +    R   ++IV+    I D L RN G+
Sbjct: 264 PAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPGS 301

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 64/156 (41%), Gaps = 32/156 (20%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+ ++ V  ++DFG+A+ +   D     T     + +MAP E   +   +   DV+SF
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAP-EALFDRIYTHQSDVWSF 238
Query: 63  GIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAA 116
           G++L E FT         P +E+F                          L +E      
Sbjct: 239 GVLLWEIFTLGGSPYPGVPVEELFK-------------------------LLKEGHRMDK 273
Query: 117 KQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
              C + ++ +  +C    P +R   K++V +L +I
Sbjct: 274 PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 27/162 (16%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPVEYGREGRVSTNGDVYS 61
           N+L++ N+V  +SDFG++++L  + ++   T+     I + +P       + ++  DV+S
Sbjct: 177 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR-KFTSASDVWS 235
Query: 62  FGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           +GI+L E  +  ++P  EM + +              V++ VD      E         C
Sbjct: 236 YGIVLWEVMSYGERPYWEMSNQD--------------VIKAVD------EGYRLPPPMDC 275
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNVGA 162
            + ++ L ++C  +    R   ++IV+    I D L RN G+
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPGS 313

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 27/162 (16%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPVEYGREGRVSTNGDVYS 61
           N+L++ N+V  +SDFG++++L  + ++   T+     I + +P       + ++  DV+S
Sbjct: 177 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR-KFTSASDVWS 235
Query: 62  FGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           +GI+L E  +  ++P  EM + +              V++ VD      E         C
Sbjct: 236 YGIVLWEVMSYGERPYWEMSNQD--------------VIKAVD------EGYRLPPPMDC 275
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNVGA 162
            + ++ L ++C  +    R   ++IV+    I D L RN G+
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPGS 313

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 27/162 (16%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPVEYGREGRVSTNGDVYS 61
           N+L++ N+V  +SDFG++++L  + ++   T+     I + +P       + ++  DV+S
Sbjct: 177 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR-KFTSASDVWS 235
Query: 62  FGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           +GI+L E  +  ++P  EM + +              V++ VD      E         C
Sbjct: 236 YGIVLWEVMSYGERPYWEMSNQD--------------VIKAVD------EGYRLPPPMDC 275
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNVGA 162
            + ++ L ++C  +    R   ++IV+    I D L RN G+
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPGS 313

>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 22/168 (13%)
Query: 3   NVLLDDNMVAHLSDFGIA-KLLIGEDQSMTQTQTLATIGYMAP------VEYGREGRVST 55
           NVLL  ++ A L+DFG+A +   G+    T  Q + T  YMAP      + + R+  +  
Sbjct: 153 NVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQ-VGTRRYMAPEVLEGAINFQRDAFLRI 211
Query: 56  NGDVYSFGIMLMEAFTRKK----PTDEM---FSGEMTLKRWINDLLSVSVMEVVDANLLT 108
             D+Y+ G++L E  +R K    P DE    F  E+     + +L  V V + +   +  
Sbjct: 212 --DMYAMGLVLWELVSRCKAADGPVDEYMLPFEEEIGQHPSLEELQEVVVHKKMRPTIKD 269
Query: 109 REDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
              +H    Q CV+       EC     E R++A  +   +S IR S+
Sbjct: 270 HWLKHPGLAQLCVTI-----EECWDHDAEARLSAGCVEERVSLIRRSV 312

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 68/153 (44%), Gaps = 23/153 (15%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA---TIGYMAPVEYGREGRVSTNGDV 59
           N+L++ N+V  +SDFG+++ L  +    T T  L     I + AP E  +  + ++  DV
Sbjct: 165 NILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP-EAIQYRKFTSASDV 223
Query: 60  YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQ 119
           +S+GI++ E          M  GE     W  D+ +  V+  ++      +D        
Sbjct: 224 WSYGIVMWEV---------MSYGERPY--W--DMTNQDVINAIE------QDYRLPPPMD 264
Query: 120 CVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
           C S +  L ++C  +    R    +IV  L K+
Sbjct: 265 CPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 297

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 27/162 (16%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPVEYGREGRVSTNGDVYS 61
           N+L++ N+V  +SDFG+ ++L  + ++   T+     I + +P       + ++  DV+S
Sbjct: 177 NILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR-KFTSASDVWS 235
Query: 62  FGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           +GI+L E  +  ++P  EM + +              V++ VD      E         C
Sbjct: 236 YGIVLWEVMSYGERPYWEMSNQD--------------VIKAVD------EGYRLPPPMDC 275
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNVGA 162
            + ++ L ++C  +    R   ++IV+    I D L RN G+
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPGS 313

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 68/153 (44%), Gaps = 23/153 (15%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA---TIGYMAPVEYGREGRVSTNGDV 59
           N+L++ N+V  +SDFG+++ L  +    T T  L     I + AP E  +  + ++  DV
Sbjct: 139 NILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP-EAIQYRKFTSASDV 197
Query: 60  YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQ 119
           +S+GI++ E          M  GE     W  D+ +  V+  ++      +D        
Sbjct: 198 WSYGIVMWEV---------MSYGERPY--W--DMTNQDVINAIE------QDYRLPPPMD 238
Query: 120 CVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
           C S +  L ++C  +    R    +IV  L K+
Sbjct: 239 CPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 271

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 25/140 (17%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
           +N+L+  ++V  ++DFG+A+++  ED   T  +     I + AP E    G  +   DV+
Sbjct: 313 ANILVSASLVCKIADFGLARVI--EDNEYTAREGAKFPIKWTAP-EAINFGSFTIKSDVW 369
Query: 61  SFGIMLMEAFTRKK-PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQ 119
           SFGI+LME  T  + P   M                 S  EV+ A  L R  R     + 
Sbjct: 370 SFGILLMEIVTYGRIPYPGM-----------------SNPEVIRA--LERGYR-MPRPEN 409
Query: 120 CVSFVFNLAMECTIESPERR 139
           C   ++N+ M C    PE R
Sbjct: 410 CPEELYNIMMRCWKNRPEER 429

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/158 (22%), Positives = 68/158 (43%), Gaps = 20/158 (12%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N  + ++    + DFG+ + +   D      + L  + +M+P E  ++G  +T  DV+SF
Sbjct: 155 NCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP-ESLKDGVFTTYSDVWSF 213
Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
           G++L E  T  +   +  S E  L+             V++  LL + D        C  
Sbjct: 214 GVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD-------NCPD 254
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNV 160
            +  L   C   +P+ R +  EI++ + +  +  FR V
Sbjct: 255 MLLELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 292

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 64/156 (41%), Gaps = 32/156 (20%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+ ++ V  ++DFG+A+ +   D     T     + +MAP E   +   +   DV+SF
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP-EALFDRIYTHQSDVWSF 238
Query: 63  GIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAA 116
           G++L E FT         P +E+F                          L +E      
Sbjct: 239 GVLLWEIFTLGGSPYPGVPVEELFK-------------------------LLKEGHRMDK 273
Query: 117 KQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
              C + ++ +  +C    P +R   K++V +L +I
Sbjct: 274 PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 64/156 (41%), Gaps = 32/156 (20%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+ ++ V  ++DFG+A+ +   D     T     + +MAP E   +   +   DV+SF
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP-EALFDRIYTHQSDVWSF 238
Query: 63  GIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAA 116
           G++L E FT         P +E+F                          L +E      
Sbjct: 239 GVLLWEIFTLGGSPYPGVPVEELFK-------------------------LLKEGHRMDK 273
Query: 117 KQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
              C + ++ +  +C    P +R   K++V +L +I
Sbjct: 274 PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 64/156 (41%), Gaps = 32/156 (20%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+ ++ V  ++DFG+A+ +   D     T     + +MAP E   +   +   DV+SF
Sbjct: 169 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP-EALFDRIYTHQSDVWSF 227
Query: 63  GIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAA 116
           G++L E FT         P +E+F                          L +E      
Sbjct: 228 GVLLWEIFTLGGSPYPGVPVEELFK-------------------------LLKEGHRMDK 262
Query: 117 KQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
              C + ++ +  +C    P +R   K++V +L +I
Sbjct: 263 PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 298

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 64/156 (41%), Gaps = 32/156 (20%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+ ++ V  ++DFG+A+ +   D     T     + +MAP E   +   +   DV+SF
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP-EALFDRIYTHQSDVWSF 238
Query: 63  GIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAA 116
           G++L E FT         P +E+F                          L +E      
Sbjct: 239 GVLLWEIFTLGGSPYPGVPVEELFK-------------------------LLKEGHRMDK 273
Query: 117 KQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
              C + ++ +  +C    P +R   K++V +L +I
Sbjct: 274 PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 64/156 (41%), Gaps = 32/156 (20%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+ ++ V  ++DFG+A+ +   D     T     + +MAP E   +   +   DV+SF
Sbjct: 165 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP-EALFDRIYTHQSDVWSF 223
Query: 63  GIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAA 116
           G++L E FT         P +E+F                          L +E      
Sbjct: 224 GVLLWEIFTLGGSPYPGVPVEELFK-------------------------LLKEGHRMDK 258
Query: 117 KQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
              C + ++ +  +C    P +R   K++V +L +I
Sbjct: 259 PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 294

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 64/156 (41%), Gaps = 32/156 (20%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+ ++ V  ++DFG+A+ +   D     T     + +MAP E   +   +   DV+SF
Sbjct: 173 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP-EALFDRIYTHQSDVWSF 231
Query: 63  GIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAA 116
           G++L E FT         P +E+F                          L +E      
Sbjct: 232 GVLLWEIFTLGGSPYPGVPVEELFK-------------------------LLKEGHRMDK 266
Query: 117 KQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
              C + ++ +  +C    P +R   K++V +L +I
Sbjct: 267 PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 302

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 64/156 (41%), Gaps = 32/156 (20%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+ ++ V  ++DFG+A+ +   D     T     + +MAP E   +   +   DV+SF
Sbjct: 172 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP-EALFDRIYTHQSDVWSF 230
Query: 63  GIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAA 116
           G++L E FT         P +E+F                          L +E      
Sbjct: 231 GVLLWEIFTLGGSPYPGVPVEELFK-------------------------LLKEGHRMDK 265
Query: 117 KQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
              C + ++ +  +C    P +R   K++V +L +I
Sbjct: 266 PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 301

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 65/157 (41%), Gaps = 34/157 (21%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTN-GDVYS 61
           NVL+ ++ V  ++DFG+A+ +   D     T     + +MAP       R+ T+  DV+S
Sbjct: 221 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE--ALFDRIYTHQSDVWS 278
Query: 62  FGIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA 115
           FG++L E FT         P +E+F                          L +E     
Sbjct: 279 FGVLLWEIFTLGGSPYPGVPVEELFK-------------------------LLKEGHRMD 313
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
               C + ++ +  +C    P +R   K++V +L +I
Sbjct: 314 KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350

>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N+LL +N V  + DFG+A+ +      + +  T   + +MAP E   +   ST  DV+S+
Sbjct: 229 NILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAP-ESIFDKIYSTKSDVWSY 287
Query: 63  GIMLMEAFT 71
           G++L E F+
Sbjct: 288 GVLLWEIFS 296

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 20/150 (13%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N+L+ +     +SDFG+++ +  ED  + ++Q    + +MA +E   +   +T  DV+SF
Sbjct: 180 NILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMA-IESLFDHIYTTQSDVWSF 238
Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
           G++L E  T        + G +  +R  N L +   ME  D                C  
Sbjct: 239 GVLLWEIVTL---GGNPYPG-IPPERLFNLLKTGHRMERPD---------------NCSE 279
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKI 152
            ++ L ++C  + P++R    +I  +L K+
Sbjct: 280 EMYRLMLQCWKQEPDKRPVFADISKDLEKM 309

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 20/150 (13%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N+L+ +     +SDFG+++ +  ED  + ++Q    + +MA +E   +   +T  DV+SF
Sbjct: 180 NILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMA-IESLFDHIYTTQSDVWSF 238
Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
           G++L E  T        + G +  +R  N L +   ME  D                C  
Sbjct: 239 GVLLWEIVTL---GGNPYPG-IPPERLFNLLKTGHRMERPD---------------NCSE 279
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKI 152
            ++ L ++C  + P++R    +I  +L K+
Sbjct: 280 EMYRLMLQCWKQEPDKRPVFADISKDLEKM 309

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 20/150 (13%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N+L+ +     +SDFG+++ +  ED  + ++Q    + +MA +E   +   +T  DV+SF
Sbjct: 180 NILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMA-IESLFDHIYTTQSDVWSF 238
Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
           G++L E  T        + G +  +R  N L +   ME  D                C  
Sbjct: 239 GVLLWEIVTL---GGNPYPG-IPPERLFNLLKTGHRMERPD---------------NCSE 279
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKI 152
            ++ L ++C  + P++R    +I  +L K+
Sbjct: 280 EMYRLMLQCWKQEPDKRPVFADISKDLEKM 309

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 65/152 (42%), Gaps = 27/152 (17%)
Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP----VEYGREGRVSTN 56
           PSN+LLD +    L DFGI+  L+    S+ +T+      YMAP        R+G     
Sbjct: 154 PSNILLDRSGNIKLCDFGISGQLV---DSIAKTRDAGCRPYMAPERIDPSASRQG-YDVR 209
Query: 57  GDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRW--INDLLSVSVMEVVDANLLTREDRHF 114
            DV+S GI L E  T          G     +W  + D L+  V++     L   E+R F
Sbjct: 210 SDVWSLGITLYELAT----------GRFPYPKWNSVFDQLT-QVVKGDPPQLSNSEEREF 258
Query: 115 AAKQQCVSFVFNLAMECTIESPERRINAKEIV 146
           +      SF+ N    C  +   +R   KE++
Sbjct: 259 SP-----SFI-NFVNLCLTKDESKRPKYKELL 284

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P N+LLDD+    +SD G+A + + E Q++     + T+GYMAP E  +  R + + D +
Sbjct: 314 PENILLDDHGHIRISDLGLA-VHVPEGQTI--KGRVGTVGYMAP-EVVKNERYTFSPDWW 369
Query: 61  SFGIMLMEAFTRKKP 75
           + G +L E    + P
Sbjct: 370 ALGCLLYEMIAGQSP 384

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 61/158 (38%), Gaps = 34/158 (21%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N L+ +  V  +SDFG+++       + +       + + AP E    GR S+  DV+SF
Sbjct: 243 NCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAP-EALNYGRYSSESDVWSF 301
Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAK----- 117
           GI+L E F+                      L  S       NL  ++ R F  K     
Sbjct: 302 GILLWETFS----------------------LGASPY----PNLSNQQTREFVEKGGRLP 335
Query: 118 --QQCVSFVFNLAMECTIESPERRINAKEIVTELSKIR 153
             + C   VF L  +C    P +R +   I  EL  IR
Sbjct: 336 CPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 61/158 (38%), Gaps = 34/158 (21%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N L+ +  V  +SDFG+++       + +       + + AP E    GR S+  DV+SF
Sbjct: 243 NCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAP-EALNYGRYSSESDVWSF 301
Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAK----- 117
           GI+L E F+                      L  S       NL  ++ R F  K     
Sbjct: 302 GILLWETFS----------------------LGASPY----PNLSNQQTREFVEKGGRLP 335
Query: 118 --QQCVSFVFNLAMECTIESPERRINAKEIVTELSKIR 153
             + C   VF L  +C    P +R +   I  EL  IR
Sbjct: 336 CPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 42.7 bits (99), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVLL +  VA + DFG+A+ ++ +   + +      + +MAP E   +   +   DV+S+
Sbjct: 182 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAP-ESIFDCVYTVQSDVWSY 240
Query: 63  GIMLMEAFT 71
           GI+L E F+
Sbjct: 241 GILLWEIFS 249

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 42.7 bits (99), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVLL +  VA + DFG+A+ ++ +   + +      + +MAP E   +   +   DV+S+
Sbjct: 194 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAP-ESIFDCVYTVQSDVWSY 252
Query: 63  GIMLMEAFT 71
           GI+L E F+
Sbjct: 253 GILLWEIFS 261

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 42.7 bits (99), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 59/138 (42%), Gaps = 22/138 (15%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N L+ +NMV  ++DFG+++ +   D           I +M P E     R +T  DV+++
Sbjct: 204 NCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPP-ESIFYNRYTTESDVWAY 262
Query: 63  GIMLMEAFTRK-KPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G++L E F+   +P   M   E+             +  V D N+L       A  + C 
Sbjct: 263 GVVLWEIFSYGLQPYYGMAHEEV-------------IYYVRDGNIL-------ACPENCP 302
Query: 122 SFVFNLAMECTIESPERR 139
             ++NL   C  + P  R
Sbjct: 303 LELYNLMRLCWSKLPADR 320

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 42.7 bits (99), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVLL +  VA + DFG+A+ ++ +   + +      + +MAP E   +   +   DV+S+
Sbjct: 194 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAP-ESIFDCVYTVQSDVWSY 252
Query: 63  GIMLMEAFT 71
           GI+L E F+
Sbjct: 253 GILLWEIFS 261

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 42.7 bits (99), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVLL +  VA + DFG+A+ ++ +   + +      + +MAP E   +   +   DV+S+
Sbjct: 190 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAP-ESIFDCVYTVQSDVWSY 248
Query: 63  GIMLMEAFT 71
           GI+L E F+
Sbjct: 249 GILLWEIFS 257

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVLL +  VA + DFG+A+ ++ +   + +      + +MAP E   +   +   DV+S+
Sbjct: 196 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAP-ESIFDCVYTVQSDVWSY 254
Query: 63  GIMLMEAFT 71
           GI+L E F+
Sbjct: 255 GILLWEIFS 263

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 1   PSNVLL-DDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
           P N+LL     V  + DFG A      D     T    +  +MAP E       S   DV
Sbjct: 133 PPNLLLVAGGTVLKICDFGTAC-----DIQTHMTNNKGSAAWMAP-EVFEGSNYSEKCDV 186
Query: 60  YSFGIMLMEAFTRKKPTDEM 79
           +S+GI+L E  TR+KP DE+
Sbjct: 187 FSWGIILWEVITRRKPFDEI 206

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 1   PSNVLL-DDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
           P N+LL     V  + DFG A      D     T    +  +MAP E       S   DV
Sbjct: 134 PPNLLLVAGGTVLKICDFGTAC-----DIQTHMTNNKGSAAWMAP-EVFEGSNYSEKCDV 187
Query: 60  YSFGIMLMEAFTRKKPTDEM 79
           +S+GI+L E  TR+KP DE+
Sbjct: 188 FSWGIILWEVITRRKPFDEI 207

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+    V  + DFG+A+ ++ +   + +      + +MAP E   EG  +   DV+S+
Sbjct: 202 NVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAP-ESLFEGIYTIKSDVWSY 260
Query: 63  GIMLMEAFT 71
           GI+L E F+
Sbjct: 261 GILLWEIFS 269

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVLL +  VA + DFG+A+ ++ +   + +      + +MAP E   +   +   DV+S+
Sbjct: 188 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAP-ESIFDCVYTVQSDVWSY 246
Query: 63  GIMLMEAFT 71
           GI+L E F+
Sbjct: 247 GILLWEIFS 255

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 18/152 (11%)
Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P N+L+  +    L+DFG+A++   +   M  T  + T+ Y AP E   +   +T  D++
Sbjct: 148 PQNILVTSSGQIKLADFGLARIYSFQ---MALTSVVVTLWYRAP-EVLLQSSYATPVDLW 203
Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRW--INDLLSVSVMEVVDANL-LTREDRHFAAK 117
           S G +  E F R+KP   +F G   + +   I D++ +   E    ++ L R+  H  + 
Sbjct: 204 SVGCIFAEMF-RRKP---LFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSA 259
Query: 118 QQCVSFVF-------NLAMECTIESPERRINA 142
           Q    FV        +L ++C   +P +RI+A
Sbjct: 260 QPIEKFVTDIDELGKDLLLKCLTFNPAKRISA 291

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 18/152 (11%)
Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P N+L+  +    L+DFG+A++   +   M  T  + T+ Y AP E   +   +T  D++
Sbjct: 148 PQNILVTSSGQIKLADFGLARIYSFQ---MALTSVVVTLWYRAP-EVLLQSSYATPVDLW 203
Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRW--INDLLSVSVMEVVDANL-LTREDRHFAAK 117
           S G +  E F R+KP   +F G   + +   I D++ +   E    ++ L R+  H  + 
Sbjct: 204 SVGCIFAEMF-RRKP---LFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSA 259
Query: 118 QQCVSFVF-------NLAMECTIESPERRINA 142
           Q    FV        +L ++C   +P +RI+A
Sbjct: 260 QPIEKFVTDIDELGKDLLLKCLTFNPAKRISA 291

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 18/152 (11%)
Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P N+L+  +    L+DFG+A++   +   M  T  + T+ Y AP E   +   +T  D++
Sbjct: 148 PQNILVTSSGQIKLADFGLARIYSFQ---MALTSVVVTLWYRAP-EVLLQSSYATPVDLW 203
Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRW--INDLLSVSVMEVVDANL-LTREDRHFAAK 117
           S G +  E F R+KP   +F G   + +   I D++ +   E    ++ L R+  H  + 
Sbjct: 204 SVGCIFAEMF-RRKP---LFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSA 259
Query: 118 QQCVSFVF-------NLAMECTIESPERRINA 142
           Q    FV        +L ++C   +P +RI+A
Sbjct: 260 QPIEKFVTDIDELGKDLLLKCLTFNPAKRISA 291

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 7/148 (4%)
Query: 3   NVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           N+L++      ++DFG+AKLL + +D  + +    + I + AP E   +   S   DV+S
Sbjct: 141 NILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAP-ESLSDNIFSRQSDVWS 199
Query: 62  FGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           FG++L E FT     D+  S      R +       V  +     L  E +   A   C 
Sbjct: 200 FGVVLYELFTY---CDKSCSPSAEFLRMMG--CERDVPALCRLLELLEEGQRLPAPPACP 254
Query: 122 SFVFNLAMECTIESPERRINAKEIVTEL 149
           + V  L   C   SP+ R +   +  +L
Sbjct: 255 AEVHELMKLCWAPSPQDRPSFSALGPQL 282

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEY-GREGR-VSTNG 57
           P N+LLD++   H++DF IA +L  E    TQ  T+A T  YMAP  +  R+G   S   
Sbjct: 143 PDNILLDEHGHVHITDFNIAAMLPRE----TQITTMAGTKPYMAPEMFSSRKGAGYSFAV 198
Query: 58  DVYSFGIMLMEAFTRKKP 75
           D +S G+   E    ++P
Sbjct: 199 DWWSLGVTAYELLRGRRP 216

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
           +N+L+ D +   ++DFG+A+L+  ED   T  +     I + AP E    G  +   DV+
Sbjct: 140 ANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAP-EAINYGTFTIKSDVW 196
Query: 61  SFGIMLMEAFTRKK 74
           SFGI+L E  T  +
Sbjct: 197 SFGILLTEIVTHGR 210

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
           +N+L+ D +   ++DFG+A+L+  ED   T  +     I + AP E    G  +   DV+
Sbjct: 139 ANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAP-EAINYGTFTIKSDVW 195
Query: 61  SFGIMLMEAFTRKK 74
           SFGI+L E  T  +
Sbjct: 196 SFGILLTEIVTHGR 209

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
           +N+L+ D +   ++DFG+A+L+  ED   T  +     I + AP E    G  +   DV+
Sbjct: 143 ANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAP-EAINYGTFTIKSDVW 199
Query: 61  SFGIMLMEAFTRKK 74
           SFGI+L E  T  +
Sbjct: 200 SFGILLTEIVTHGR 213

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
           +N+L+ D +   ++DFG+A+L+  ED   T  +     I + AP E    G  +   DV+
Sbjct: 144 ANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAP-EAINYGTFTIKSDVW 200
Query: 61  SFGIMLMEAFTRKK 74
           SFGI+L E  T  +
Sbjct: 201 SFGILLTEIVTHGR 214

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
           +N+L+ D +   ++DFG+A+L+  ED   T  +     I + AP E    G  +   DV+
Sbjct: 138 ANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAP-EAINYGTFTIKSDVW 194
Query: 61  SFGIMLMEAFTRKK 74
           SFGI+L E  T  +
Sbjct: 195 SFGILLTEIVTHGR 208

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
           +N+L+ D +   ++DFG+A+L+  ED   T  +     I + AP E    G  +   DV+
Sbjct: 138 ANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAP-EAINYGTFTIKSDVW 194
Query: 61  SFGIMLMEAFTRKK 74
           SFGI+L E  T  +
Sbjct: 195 SFGILLTEIVTHGR 208

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P N+LLDD+    +SD G+A + + E Q++     + T+GYMAP E  +  R + + D +
Sbjct: 314 PENILLDDHGHIRISDLGLA-VHVPEGQTI--KGRVGTVGYMAP-EVVKNERYTFSPDWW 369
Query: 61  SFGIMLMEAFTRKKP 75
           + G +L E    + P
Sbjct: 370 ALGCLLYEMIAGQSP 384

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
           +N+L+ D +   ++DFG+A+L+  ED   T  +     I + AP E    G  +   DV+
Sbjct: 147 ANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAP-EAINYGTFTIKSDVW 203
Query: 61  SFGIMLMEAFTRKK 74
           SFGI+L E  T  +
Sbjct: 204 SFGILLTEIVTHGR 217

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
           +N+L+ D +   ++DFG+A+L+  ED   T  +     I + AP E    G  +   DV+
Sbjct: 138 ANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAP-EAINYGTFTIKSDVW 194
Query: 61  SFGIMLMEAFTRKK 74
           SFGI+L E  T  +
Sbjct: 195 SFGILLTEIVTHGR 208

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
           +N+L+ D +   ++DFG+A+L+  ED   T  +     I + AP E    G  +   DV+
Sbjct: 133 ANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAP-EAINYGTFTIKSDVW 189
Query: 61  SFGIMLMEAFTRKK 74
           SFGI+L E  T  +
Sbjct: 190 SFGILLTEIVTHGR 203

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/152 (22%), Positives = 69/152 (45%), Gaps = 27/152 (17%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N+L+ +N VA ++DFG+++   G++  + +T     + +MA +E       +TN DV+S+
Sbjct: 162 NILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRWMA-IESLNYSVYTTNSDVWSY 217
Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQ--QC 120
           G++L E                     I  L       +  A L  +  + +  ++   C
Sbjct: 218 GVLLWE---------------------IVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNC 256
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
              V++L  +C  E P  R +  +I+  L+++
Sbjct: 257 DDEVYDLMRQCWREKPYERPSFAQILVSLNRM 288

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
           +N+L+ D +   ++DFG+A+L+  ED   T  +     I + AP E    G  +   DV+
Sbjct: 134 ANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAP-EAINYGTFTIKSDVW 190
Query: 61  SFGIMLMEAFTRKK 74
           SFGI+L E  T  +
Sbjct: 191 SFGILLTEIVTHGR 204

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
           +N+L+ D +   ++DFG+A+L+  ED   T  +     I + AP E    G  +   DV+
Sbjct: 144 ANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAP-EAINYGTFTIKSDVW 200
Query: 61  SFGIMLMEAFTRKK 74
           SFGI+L E  T  +
Sbjct: 201 SFGILLTEIVTHGR 214

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
           +N+L+ D +   ++DFG+A+L+  ED   T  +     I + AP E    G  +   DV+
Sbjct: 146 ANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAP-EAINYGTFTIKSDVW 202
Query: 61  SFGIMLMEAFTRKK 74
           SFGI+L E  T  +
Sbjct: 203 SFGILLTEIVTHGR 216

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/152 (22%), Positives = 69/152 (45%), Gaps = 27/152 (17%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N+L+ +N VA ++DFG+++   G++  + +T     + +MA +E       +TN DV+S+
Sbjct: 172 NILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRWMA-IESLNYSVYTTNSDVWSY 227
Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQ--QC 120
           G++L E                     I  L       +  A L  +  + +  ++   C
Sbjct: 228 GVLLWE---------------------IVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNC 266
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
              V++L  +C  E P  R +  +I+  L+++
Sbjct: 267 DDEVYDLMRQCWREKPYERPSFAQILVSLNRM 298

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/152 (22%), Positives = 69/152 (45%), Gaps = 27/152 (17%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N+L+ +N VA ++DFG+++   G++  + +T     + +MA +E       +TN DV+S+
Sbjct: 169 NILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRWMA-IESLNYSVYTTNSDVWSY 224
Query: 63  GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQ--QC 120
           G++L E                     I  L       +  A L  +  + +  ++   C
Sbjct: 225 GVLLWE---------------------IVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNC 263
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
              V++L  +C  E P  R +  +I+  L+++
Sbjct: 264 DDEVYDLMRQCWREKPYERPSFAQILVSLNRM 295

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
           +N+L+ D +   ++DFG+A+L+  ED   T  +     I + AP E    G  +   DV+
Sbjct: 148 ANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAP-EAINYGTFTIKSDVW 204
Query: 61  SFGIMLMEAFTRKK 74
           SFGI+L E  T  +
Sbjct: 205 SFGILLTEIVTHGR 218

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 7/148 (4%)
Query: 3   NVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           N+L++      ++DFG+AKLL + +D  + +    + I + AP E   +   S   DV+S
Sbjct: 145 NILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP-ESLSDNIFSRQSDVWS 203
Query: 62  FGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           FG++L E FT     D+  S      R +       V  +     L  E +   A   C 
Sbjct: 204 FGVVLYELFTY---CDKSCSPSAEFLRMMG--CERDVPALCRLLELLEEGQRLPAPPACP 258
Query: 122 SFVFNLAMECTIESPERRINAKEIVTEL 149
           + V  L   C   SP+ R +   +  +L
Sbjct: 259 AEVHELMKLCWAPSPQDRPSFSALGPQL 286

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
           +N+L+ D +   ++DFG+A+L+  ED   T  +     I + AP E    G  +   DV+
Sbjct: 138 ANILVSDTLSCKIADFGLARLI--EDAEXTAREGAKFPIKWTAP-EAINYGTFTIKSDVW 194
Query: 61  SFGIMLMEAFTRKK 74
           SFGI+L E  T  +
Sbjct: 195 SFGILLTEIVTHGR 208

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 13/108 (12%)
Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNG--- 57
           PSN+L+D N    LSDFG ++ ++  D+ +  ++   T  +M P  +  E   S NG   
Sbjct: 180 PSNILMDKNGRVKLSDFGESEYMV--DKKIKGSR--GTYEFMPPEFFSNES--SYNGAKV 233
Query: 58  DVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDAN 105
           D++S GI L   F    P    FS +++L    N++ + ++   +D N
Sbjct: 234 DIWSLGICLYVMFYNVVP----FSLKISLVELFNNIRTKNIEYPLDRN 277

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 7/148 (4%)
Query: 3   NVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           N+L++      ++DFG+AKLL + +D  + +    + I + AP E   +   S   DV+S
Sbjct: 144 NILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP-ESLSDNIFSRQSDVWS 202
Query: 62  FGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           FG++L E FT     D+  S      R +     V  +       L  E +   A   C 
Sbjct: 203 FGVVLYELFTY---CDKSCSPSAEFLRMMGSERDVPALS--RLLELLEEGQRLPAPPACP 257
Query: 122 SFVFNLAMECTIESPERRINAKEIVTEL 149
           + V  L   C   SP+ R +   +  +L
Sbjct: 258 AEVHELMKLCWAPSPQDRPSFSALGPQL 285

>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis SerineTHREONINE Kinase, Pkne Length = 309

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQ-TQTLATIGYMAPVEYGREGRVSTNGDV 59
           P N+L+  +  A+L DFGIA      D+ +TQ   T+ T+ Y AP  +  E   +   D+
Sbjct: 162 PENILVSADDFAYLVDFGIASATT--DEKLTQLGNTVGTLYYXAPERFS-ESHATYRADI 218
Query: 60  YSFGIMLMEAFTRKKP 75
           Y+   +L E  T   P
Sbjct: 219 YALTCVLYECLTGSPP 234

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P N+LL+++M   ++DFG AK+L  E +       + T  Y++P E   E   S + D++
Sbjct: 160 PENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP-ELLTEKSASKSSDLW 218
Query: 61  SFGIMLME 68
           + G ++ +
Sbjct: 219 ALGCIIYQ 226

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 18/161 (11%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL--ATIGYMAPVEYGREGRVSTNGDVY 60
           N+L+++     + DFG+ K+L  +D+   + +    + I + AP E   E + S   DV+
Sbjct: 147 NILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVW 204
Query: 61  SFGIMLMEAFT----RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDAN-LLTREDRHFA 115
           SFG++L E FT     K P  E     M        ++   ++E++  N  L R D    
Sbjct: 205 SFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD---- 258
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
               C   ++ +  EC   +  +R + +++   + +IRD++
Sbjct: 259 ---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 296

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 18/161 (11%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL--ATIGYMAPVEYGREGRVSTNGDVY 60
           N+L+++     + DFG+ K+L  +D+   + +    + I + AP E   E + S   DV+
Sbjct: 147 NILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVW 204
Query: 61  SFGIMLMEAFT----RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDAN-LLTREDRHFA 115
           SFG++L E FT     K P  E     M        ++   ++E++  N  L R D    
Sbjct: 205 SFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD---- 258
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
               C   ++ +  EC   +  +R + +++   + +IRD++
Sbjct: 259 ---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 296

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 18/161 (11%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL--ATIGYMAPVEYGREGRVSTNGDVY 60
           N+L+++     + DFG+ K+L  +D+   + +    + I + AP E   E + S   DV+
Sbjct: 144 NILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVW 201
Query: 61  SFGIMLMEAFT----RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDAN-LLTREDRHFA 115
           SFG++L E FT     K P  E     M        ++   ++E++  N  L R D    
Sbjct: 202 SFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD---- 255
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
               C   ++ +  EC   +  +R + +++   + +IRD++
Sbjct: 256 ---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 18/161 (11%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL--ATIGYMAPVEYGREGRVSTNGDVY 60
           N+L+++     + DFG+ K+L  +D+   + +    + I + AP E   E + S   DV+
Sbjct: 150 NILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVW 207
Query: 61  SFGIMLMEAFT----RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDAN-LLTREDRHFA 115
           SFG++L E FT     K P  E     M        ++   ++E++  N  L R D    
Sbjct: 208 SFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD---- 261
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
               C   ++ +  EC   +  +R + +++   + +IRD++
Sbjct: 262 ---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 299

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/154 (21%), Positives = 68/154 (44%), Gaps = 25/154 (16%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA---TIGYMAPVEYGREGRVSTNGDV 59
           N+L++ N+V  +SDFG+++ L       T+T +L     I + AP       + ++  D 
Sbjct: 148 NILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFR-KFTSASDA 206
Query: 60  YSFGIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQ 118
           +S+GI++ E  +  ++P  +M                 S  +V++A     +D       
Sbjct: 207 WSYGIVMWEVMSFGERPYWDM-----------------SNQDVINA---IEQDYRLPPPP 246
Query: 119 QCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
            C + +  L ++C  +    R    ++V+ L K+
Sbjct: 247 DCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 280

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 18/161 (11%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL--ATIGYMAPVEYGREGRVSTNGDVY 60
           N+L+++     + DFG+ K+L  +D+   + +    + I + AP E   E + S   DV+
Sbjct: 147 NILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVW 204
Query: 61  SFGIMLMEAFT----RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDAN-LLTREDRHFA 115
           SFG++L E FT     K P  E     M        ++   ++E++  N  L R D    
Sbjct: 205 SFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD---- 258
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
               C   ++ +  EC   +  +R + +++   + +IRD++
Sbjct: 259 ---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 296

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 18/161 (11%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL--ATIGYMAPVEYGREGRVSTNGDVY 60
           N+L+++     + DFG+ K+L  +D+   + +    + I + AP E   E + S   DV+
Sbjct: 149 NILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVW 206
Query: 61  SFGIMLMEAFT----RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDAN-LLTREDRHFA 115
           SFG++L E FT     K P  E     M        ++   ++E++  N  L R D    
Sbjct: 207 SFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD---- 260
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
               C   ++ +  EC   +  +R + +++   + +IRD++
Sbjct: 261 ---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 298

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 18/161 (11%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL--ATIGYMAPVEYGREGRVSTNGDVY 60
           N+L+++     + DFG+ K+L  +D+   + +    + I + AP E   E + S   DV+
Sbjct: 144 NILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVW 201
Query: 61  SFGIMLMEAFT----RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDAN-LLTREDRHFA 115
           SFG++L E FT     K P  E     M        ++   ++E++  N  L R D    
Sbjct: 202 SFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD---- 255
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
               C   ++ +  EC   +  +R + +++   + +IRD++
Sbjct: 256 ---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 18/161 (11%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL--ATIGYMAPVEYGREGRVSTNGDVY 60
           N+L+++     + DFG+ K+L  +D+   + +    + I + AP E   E + S   DV+
Sbjct: 162 NILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVW 219
Query: 61  SFGIMLMEAFT----RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDAN-LLTREDRHFA 115
           SFG++L E FT     K P  E     M        ++   ++E++  N  L R D    
Sbjct: 220 SFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD---- 273
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
               C   ++ +  EC   +  +R + +++   + +IRD++
Sbjct: 274 ---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 311

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 18/161 (11%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL--ATIGYMAPVEYGREGRVSTNGDVY 60
           N+L+++     + DFG+ K+L  +D+   + +    + I + AP E   E + S   DV+
Sbjct: 143 NILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVW 200
Query: 61  SFGIMLMEAFT----RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDAN-LLTREDRHFA 115
           SFG++L E FT     K P  E     M        ++   ++E++  N  L R D    
Sbjct: 201 SFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD---- 254
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
               C   ++ +  EC   +  +R + +++   + +IRD++
Sbjct: 255 ---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 292

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 71/159 (44%), Gaps = 27/159 (16%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPVEYGREGRVSTNGDVYS 61
           N+L++ N+V  +SDFG++++L  + ++   T+     I + AP       + ++  DV+S
Sbjct: 154 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFR-KFTSASDVWS 212
Query: 62  FGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           +GI++ E  +  ++P  EM +                  +V+ A     E     +   C
Sbjct: 213 YGIVMWEVVSYGERPYWEMTN-----------------QDVIKA---VEEGYRLPSPMDC 252
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRN 159
            + ++ L ++C  +    R    EIV  L    D L RN
Sbjct: 253 PAALYQLMLDCWQKERNSRPKFDEIVNML----DKLIRN 287

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 18/161 (11%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL--ATIGYMAPVEYGREGRVSTNGDVY 60
           N+L+++     + DFG+ K+L  +D+   + +    + I + AP E   E + S   DV+
Sbjct: 151 NILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVW 208
Query: 61  SFGIMLMEAFT----RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDAN-LLTREDRHFA 115
           SFG++L E FT     K P  E     M        ++   ++E++  N  L R D    
Sbjct: 209 SFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD---- 262
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
               C   ++ +  EC   +  +R + +++   + +IRD++
Sbjct: 263 ---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 300

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 18/161 (11%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL--ATIGYMAPVEYGREGRVSTNGDVY 60
           N+L+++     + DFG+ K+L  +D+   + +    + I + AP E   E + S   DV+
Sbjct: 148 NILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVW 205
Query: 61  SFGIMLMEAFT----RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDAN-LLTREDRHFA 115
           SFG++L E FT     K P  E     M        ++   ++E++  N  L R D    
Sbjct: 206 SFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD---- 259
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
               C   ++ +  EC   +  +R + +++   + +IRD++
Sbjct: 260 ---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 297

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 18/161 (11%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL--ATIGYMAPVEYGREGRVSTNGDVY 60
           N+L+++     + DFG+ K+L  +D+   + +    + I + AP E   E + S   DV+
Sbjct: 162 NILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVW 219
Query: 61  SFGIMLMEAFT----RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDAN-LLTREDRHFA 115
           SFG++L E FT     K P  E     M        ++   ++E++  N  L R D    
Sbjct: 220 SFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD---- 273
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
               C   ++ +  EC   +  +R + +++   + +IRD++
Sbjct: 274 ---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 311

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 18/161 (11%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL--ATIGYMAPVEYGREGRVSTNGDVY 60
           N+L+++     + DFG+ K+L  +D+   + +    + I + AP E   E + S   DV+
Sbjct: 145 NILVENENRVKIGDFGLTKVL-PQDKEYYKVKEPGESPIFWYAP-ESLTESKFSVASDVW 202
Query: 61  SFGIMLMEAFT----RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDAN-LLTREDRHFA 115
           SFG++L E FT     K P  E     M        ++   ++E++  N  L R D    
Sbjct: 203 SFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD---- 256
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
               C   ++ +  EC   +  +R + +++   + +IRD++
Sbjct: 257 ---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 294

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGE-DQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           NVL+D N+V  +SDFG++++L  + D + T T     I + AP         S+  DV+S
Sbjct: 181 NVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFR-TFSSASDVWS 239
Query: 62  FGIMLMEAFT 71
           FG+++ E   
Sbjct: 240 FGVVMWEVLA 249

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 18/161 (11%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL--ATIGYMAPVEYGREGRVSTNGDVY 60
           N+L+++     + DFG+ K+L  +D+   + +    + I + AP E   E + S   DV+
Sbjct: 144 NILVENENRVKIGDFGLTKVL-PQDKEFFKVKEPGESPIFWYAP-ESLTESKFSVASDVW 201
Query: 61  SFGIMLMEAFT----RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDAN-LLTREDRHFA 115
           SFG++L E FT     K P  E     M        ++   ++E++  N  L R D    
Sbjct: 202 SFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD---- 255
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
               C   ++ +  EC   +  +R + +++   + +IRD++
Sbjct: 256 ---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGE-DQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           NVL+D N+V  +SDFG++++L  + D + T T     I + AP         S+  DV+S
Sbjct: 181 NVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFR-TFSSASDVWS 239
Query: 62  FGIMLMEAFT 71
           FG+++ E   
Sbjct: 240 FGVVMWEVLA 249

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 18/161 (11%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL--ATIGYMAPVEYGREGRVSTNGDVY 60
           N+L+++     + DFG+ K+L  +D+   + +    + I + AP E   E + S   DV+
Sbjct: 142 NILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVW 199
Query: 61  SFGIMLMEAFT----RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDAN-LLTREDRHFA 115
           SFG++L E FT     K P  E     M        ++   ++E++  N  L R D    
Sbjct: 200 SFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD---- 253
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
               C   ++ +  EC   +  +R + +++   + +IRD +
Sbjct: 254 ---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM 291

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 18/161 (11%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL--ATIGYMAPVEYGREGRVSTNGDVY 60
           N+L+++     + DFG+ K+L  +D+   + +    + I + AP E   E + S   DV+
Sbjct: 175 NILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVW 232
Query: 61  SFGIMLMEAFT----RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDAN-LLTREDRHFA 115
           SFG++L E FT     K P  E     M        ++   ++E++  N  L R D    
Sbjct: 233 SFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD---- 286
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
               C   ++ +  EC   +  +R + +++   + +IRD +
Sbjct: 287 ---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM 324

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMT-QTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           NVLL +   A +SDFG++K L  +D   T ++     + + AP E     + S+  DV+S
Sbjct: 140 NVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAP-ECINFRKFSSRSDVWS 198
Query: 62  FGIMLMEAFTR-KKPTDEMFSGEM 84
           +G+ + EA +  +KP  +M   E+
Sbjct: 199 YGVTMWEALSYGQKPYKKMKGPEV 222

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 3   NVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           N+L++      ++DFG+AKLL + +D  + +    + I + AP E   +   S   DV+S
Sbjct: 157 NILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP-ESLSDNIFSRQSDVWS 215
Query: 62  FGIMLMEAFT 71
           FG++L E FT
Sbjct: 216 FGVVLYELFT 225

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 23/155 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+       ++DFG+A+LL G+++          I +MA +E     + +   DV+S+
Sbjct: 170 NVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMA-LECIHYRKFTHQSDVWSY 228
Query: 63  GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G+ + E  T   KP D + + E+                    +LL + +R       C 
Sbjct: 229 GVTIWELMTFGGKPYDGIPTREI-------------------PDLLEKGER-LPQPPICT 268
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI-RDS 155
             V+ + ++C +   + R   KE+  E S++ RD 
Sbjct: 269 IDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 303

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 12/83 (14%)
Query: 1   PSNVLLDDNMVAHLSDFGIAKLL----------IGEDQSMTQTQTLATIGYMAPVEYGRE 50
           PSN+L++ N    + DFG+A+++           G+   M  T+ +AT  Y AP      
Sbjct: 140 PSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM--TEXVATRWYRAPEVMLTS 197
Query: 51  GRVSTNGDVYSFGIMLMEAFTRK 73
            + S   DV+S G +L E F R+
Sbjct: 198 AKYSRAMDVWSCGCILAELFLRR 220

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P+NV LD      L DFG+A++L   D S  +T  + T  YM+P +  R    +   D++
Sbjct: 144 PANVFLDGKQNVKLGDFGLARIL-NHDTSFAKT-FVGTPYYMSPEQMNRMS-YNEKSDIW 200
Query: 61  SFGIMLME 68
           S G +L E
Sbjct: 201 SLGCLLYE 208

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 23/155 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+       ++DFG+A+LL G+++          I +MA +E     + +   DV+S+
Sbjct: 147 NVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMA-LECIHYRKFTHQSDVWSY 205
Query: 63  GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G+ + E  T   KP D + + E+                    +LL + +R       C 
Sbjct: 206 GVTIWELMTFGGKPYDGIPTREI-------------------PDLLEKGER-LPQPPICT 245
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI-RDS 155
             V+ + ++C +   + R   KE+  E S++ RD 
Sbjct: 246 IDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 280

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMT-QTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           NVLL +   A +SDFG++K L  +D   T ++     + + AP E     + S+  DV+S
Sbjct: 466 NVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAP-ECINFRKFSSRSDVWS 524
Query: 62  FGIMLMEAFTR-KKPTDEMFSGEM 84
           +G+ + EA +  +KP  +M   E+
Sbjct: 525 YGVTMWEALSYGQKPYKKMKGPEV 548

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 23/155 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+       ++DFG+AKLL  E++          I +MA +E       +   DV+S+
Sbjct: 151 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 209
Query: 63  GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G+ + E  T   KP D + + E++                   ++L + +R       C 
Sbjct: 210 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 249
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI-RDS 155
             V+ + ++C +   + R   +E++ E SK+ RD 
Sbjct: 250 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 284

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 75/158 (47%), Gaps = 25/158 (15%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSM-TQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           N+L++ N+V  +SDFG+++++  + +++ T T     + + AP E  +  + ++  DV+S
Sbjct: 175 NILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAP-EAIQYRKFTSASDVWS 233
Query: 62  FGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           +GI++ E          M  GE     W  D+ +  V++ ++      E     A   C 
Sbjct: 234 YGIVMWEV---------MSYGERPY--W--DMSNQDVIKAIE------EGYRLPAPMDCP 274
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRN 159
           + +  L ++C  +    R   ++IV     I D + RN
Sbjct: 275 AGLHQLMLDCWQKERAERPKFEQIVG----ILDKMIRN 308

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/154 (21%), Positives = 67/154 (43%), Gaps = 25/154 (16%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA---TIGYMAPVEYGREGRVSTNGDV 59
           N+L++ N+V  +SDFG+++ L       T T +L     I + AP       + ++  D 
Sbjct: 146 NILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFR-KFTSASDA 204
Query: 60  YSFGIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQ 118
           +S+GI++ E  +  ++P  +M                 S  +V++A     +D       
Sbjct: 205 WSYGIVMWEVMSFGERPYWDM-----------------SNQDVINA---IEQDYRLPPPP 244
Query: 119 QCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
            C + +  L ++C  +    R    ++V+ L K+
Sbjct: 245 DCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 278

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
            N+L+D      + DFG+++L       ++      T  +MAP E  R+   +   DVYS
Sbjct: 168 PNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAP-EVLRDEPSNEKSDVYS 224
Query: 62  FGIMLMEAFTRKKP 75
           FG++L E  T ++P
Sbjct: 225 FGVILWELATLQQP 238

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 12/83 (14%)
Query: 1   PSNVLLDDNMVAHLSDFGIAKLL----------IGEDQSMTQTQTLATIGYMAPVEYGRE 50
           PSN+L++ N    + DFG+A+++           G+   M  T+ +AT  Y AP      
Sbjct: 140 PSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM--TEYVATRWYRAPEVMLTS 197
Query: 51  GRVSTNGDVYSFGIMLMEAFTRK 73
            + S   DV+S G +L E F R+
Sbjct: 198 AKYSRAMDVWSCGCILAELFLRR 220

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 64/151 (42%), Gaps = 27/151 (17%)
Query: 6   LDDN--MVAHLSDFGIAKLLIGEDQSM-TQTQTLATIGYMAPVEYGREGRVST-NGDVYS 61
           LD+N  + A ++DFG+++      QS+ + +  L    +MAP   G E    T   D YS
Sbjct: 160 LDENAPVCAKVADFGLSQ------QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYS 213
Query: 62  FGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           F ++L    T + P DE   G++                    N++  E       + C 
Sbjct: 214 FAMILYTILTGEGPFDEYSYGKIKF-----------------INMIREEGLRPTIPEDCP 256
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
             + N+   C    P++R +   IV ELS++
Sbjct: 257 PRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+       ++DFG+AKLL  E++          I +MA +E       +   DV+S+
Sbjct: 149 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 207
Query: 63  GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G+ + E  T   KP D + + E++                   ++L + +R       C 
Sbjct: 208 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 247
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
             V+ + ++C +   + R   +E++ E SK+
Sbjct: 248 IDVYMIMVKCWMIDADSRPKFRELIIEFSKM 278

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 23/155 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+       ++DFG+AKLL  E++          I +MA +E       +   DV+S+
Sbjct: 150 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 208
Query: 63  GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G+ + E  T   KP D + + E++                   ++L + +R       C 
Sbjct: 209 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 248
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI-RDS 155
             V+ + ++C +   + R   +E++ E SK+ RD 
Sbjct: 249 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 283

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+       ++DFG+AKLL  E++          I +MA +E       +   DV+S+
Sbjct: 141 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 199
Query: 63  GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G+ + E  T   KP D + + E++                   ++L + +R       C 
Sbjct: 200 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 239
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
             V+ + ++C +   + R   +E++ E SK+
Sbjct: 240 IDVYMIMVKCWMIDADSRPKFRELIIEFSKM 270

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+       ++DFG+AKLL  E++          I +MA +E       +   DV+S+
Sbjct: 148 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 206
Query: 63  GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G+ + E  T   KP D + + E++                   ++L + +R       C 
Sbjct: 207 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 246
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
             V+ + ++C +   + R   +E++ E SK+
Sbjct: 247 IDVYMIMVKCWMIDADSRPKFRELIIEFSKM 277

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+       ++DFG+AKLL  E++          I +MA +E       +   DV+S+
Sbjct: 147 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 205
Query: 63  GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G+ + E  T   KP D + + E++                   ++L + +R       C 
Sbjct: 206 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 245
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
             V+ + ++C +   + R   +E++ E SK+
Sbjct: 246 IDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+       ++DFG+AKLL  E++          I +MA +E       +   DV+S+
Sbjct: 149 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 207
Query: 63  GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G+ + E  T   KP D + + E++                   ++L + +R       C 
Sbjct: 208 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 247
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
             V+ + ++C +   + R   +E++ E SK+
Sbjct: 248 IDVYMIMVKCWMIDADSRPKFRELIIEFSKM 278

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+       ++DFG+AKLL  E++          I +MA +E       +   DV+S+
Sbjct: 153 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 211
Query: 63  GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G+ + E  T   KP D + + E++                   ++L + +R       C 
Sbjct: 212 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 251
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
             V+ + ++C +   + R   +E++ E SK+
Sbjct: 252 IDVYMIMVKCWMIDADSRPKFRELIIEFSKM 282

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 23/155 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+       ++DFG+AKLL  E++          I +MA +E       +   DV+S+
Sbjct: 150 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 208
Query: 63  GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G+ + E  T   KP D + + E++                   ++L + +R       C 
Sbjct: 209 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 248
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI-RDS 155
             V+ + ++C +   + R   +E++ E SK+ RD 
Sbjct: 249 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 283

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+       ++DFG+AKLL  E++          I +MA +E       +   DV+S+
Sbjct: 154 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 212
Query: 63  GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G+ + E  T   KP D + + E++                   ++L + +R       C 
Sbjct: 213 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 252
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
             V+ + ++C +   + R   +E++ E SK+
Sbjct: 253 IDVYMIMVKCWMIDADSRPKFRELIIEFSKM 283

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+       ++DFG+AKLL  E++          I +MA +E       +   DV+S+
Sbjct: 154 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 212
Query: 63  GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G+ + E  T   KP D + + E++                   ++L + +R       C 
Sbjct: 213 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 252
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
             V+ + ++C +   + R   +E++ E SK+
Sbjct: 253 IDVYMIMVKCWMIDADSRPKFRELIIEFSKM 283

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+       ++DFG+AKLL  E++          I +MA +E       +   DV+S+
Sbjct: 148 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 206
Query: 63  GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G+ + E  T   KP D + + E++                   ++L + +R       C 
Sbjct: 207 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 246
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
             V+ + ++C +   + R   +E++ E SK+
Sbjct: 247 IDVYMIMVKCWMIDADSRPKFRELIIEFSKM 277

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+       ++DFG+AKLL  E++          I +MA +E       +   DV+S+
Sbjct: 147 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 205
Query: 63  GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G+ + E  T   KP D + + E++                   ++L + +R       C 
Sbjct: 206 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 245
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
             V+ + ++C +   + R   +E++ E SK+
Sbjct: 246 IDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+       ++DFG+AKLL  E++          I +MA +E       +   DV+S+
Sbjct: 147 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 205
Query: 63  GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G+ + E  T   KP D + + E++                   ++L + +R       C 
Sbjct: 206 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 245
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
             V+ + ++C +   + R   +E++ E SK+
Sbjct: 246 IDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 23/155 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+       ++DFG+AKLL  E++          I +MA +E       +   DV+S+
Sbjct: 150 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 208
Query: 63  GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G+ + E  T   KP D + + E++                   ++L + +R       C 
Sbjct: 209 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 248
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI-RDS 155
             V+ + ++C +   + R   +E++ E SK+ RD 
Sbjct: 249 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 283

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+       ++DFG+AKLL  E++          I +MA +E       +   DV+S+
Sbjct: 144 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 202
Query: 63  GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G+ + E  T   KP D + + E++                   ++L + +R       C 
Sbjct: 203 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 242
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
             V+ + ++C +   + R   +E++ E SK+
Sbjct: 243 IDVYMIMVKCWMIDADSRPKFRELIIEFSKM 273

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+       ++DFG+AKLL  E++          I +MA +E       +   DV+S+
Sbjct: 154 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 212
Query: 63  GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G+ + E  T   KP D + + E++                   ++L + +R       C 
Sbjct: 213 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 252
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
             V+ + ++C +   + R   +E++ E SK+
Sbjct: 253 IDVYMIMVKCWMIDADSRPKFRELIIEFSKM 283

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+       ++DFG+AKLL  E++          I +MA +E       +   DV+S+
Sbjct: 147 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 205
Query: 63  GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G+ + E  T   KP D + + E++                   ++L + +R       C 
Sbjct: 206 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 245
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
             V+ + ++C +   + R   +E++ E SK+
Sbjct: 246 IDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/157 (19%), Positives = 73/157 (46%), Gaps = 31/157 (19%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGRE-----GRVSTNG 57
           N L++D  V  +SDFG+++ ++ ++++       +++G   PV +         + S+  
Sbjct: 150 NCLVNDQGVVKVSDFGLSRYVLDDEET-------SSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 58  DVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAK 117
           D+++FG+++ E ++          G+M  +R+ N   S +   +     L R   H A++
Sbjct: 203 DIWAFGVLMWEIYSL---------GKMPYERFTN---SETAEHIAQGLRLYRP--HLASE 248
Query: 118 QQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRD 154
           +     V+ +   C  E  + R   K +++ +  + D
Sbjct: 249 K-----VYTIMYSCWHEKADERPTFKILLSNILDVMD 280

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+       ++DFG+AKLL  E++          I +MA +E       +   DV+S+
Sbjct: 181 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 239
Query: 63  GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G+ + E  T   KP D + + E++                   ++L + +R       C 
Sbjct: 240 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 279
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
             V+ + ++C +   + R   +E++ E SK+
Sbjct: 280 IDVYMIMVKCWMIDADSRPKFRELIIEFSKM 310

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P N+LL+++M   ++DFG AK+L  E +       + T  Y++P E   E     + D++
Sbjct: 138 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP-ELLTEKSACKSSDLW 196
Query: 61  SFGIMLME 68
           + G ++ +
Sbjct: 197 ALGCIIYQ 204

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P N+LL+++M   ++DFG AK+L  E +       + T  Y++P E   E     + D++
Sbjct: 135 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP-ELLTEKSACKSSDLW 193
Query: 61  SFGIMLME 68
           + G ++ +
Sbjct: 194 ALGCIIYQ 201

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+       ++DFG+AKLL  E++          I +MA +E       +   DV+S+
Sbjct: 172 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 230
Query: 63  GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G+ + E  T   KP D + + E++                   ++L + +R       C 
Sbjct: 231 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 270
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
             V+ + ++C +   + R   +E++ E SK+
Sbjct: 271 IDVYMIMVKCWMIDADSRPKFRELIIEFSKM 301

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P N+LL+++M   ++DFG AK+L  E +       + T  Y++P E   E     + D++
Sbjct: 137 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP-ELLTEKSACKSSDLW 195
Query: 61  SFGIMLME 68
           + G ++ +
Sbjct: 196 ALGCIIYQ 203

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P N+LL+++M   ++DFG AK+L  E +       + T  Y++P E   E     + D++
Sbjct: 136 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP-ELLTEKSACKSSDLW 194
Query: 61  SFGIMLME 68
           + G ++ +
Sbjct: 195 ALGCIIYQ 202

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 39.7 bits (91), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P N+LLD+     +SDFG+A +    ++     +   T+ Y+AP    R    +   DV+
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 61  SFGIMLMEAFTRKKPTDE 78
           S GI+L      + P D+
Sbjct: 192 SCGIVLTAMLAGELPWDQ 209

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 39.7 bits (91), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P N+LLD+     +SDFG+A +    ++     +   T+ Y+AP    R    +   DV+
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 61  SFGIMLMEAFTRKKPTDE 78
           S GI+L      + P D+
Sbjct: 193 SCGIVLTAMLAGELPWDQ 210

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 39.3 bits (90), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P N+LLD+     +SDFG+A +    ++     +   T+ Y+AP    R    +   DV+
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 61  SFGIMLMEAFTRKKPTDE 78
           S GI+L      + P D+
Sbjct: 192 SCGIVLTAMLAGELPWDQ 209

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	164
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	3e-29
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	1e-28
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	1e-27
3soc_A	322	Activin receptor type-2A; structural genomics cons	2e-23
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	1e-18
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	3e-18
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	3e-18
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	6e-18
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	3e-17
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	5e-17
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	2e-16
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-16
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	6e-16
3q4u_A	301	Activin receptor type-1; structural genomics conso	2e-15
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	2e-15
3ork_A	311	Serine/threonine protein kinase; structural genomi	1e-14
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	1e-14
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	2e-14
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	3e-14
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	1e-13
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	4e-13
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	3e-12
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	4e-12
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	6e-12
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	7e-12
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	7e-12
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	8e-12
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	9e-12
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	1e-11
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	1e-11
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	1e-11
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	2e-11
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	2e-11
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	2e-11
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-11
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	3e-11
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	3e-11
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	4e-11
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	5e-11
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	7e-11
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	7e-11
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	9e-11
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	1e-10
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-10
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	1e-10
3pls_A	298	Macrophage-stimulating protein receptor; protein k	1e-10
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	1e-10
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	2e-10
4aoj_A	329	High affinity nerve growth factor receptor; transf	2e-10
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	2e-10
3an0_A	340	Dual specificity mitogen-activated protein kinase;	3e-10
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	3e-10
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	3e-10
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	4e-10
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	4e-10
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	4e-10
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	4e-10
2dyl_A	318	Dual specificity mitogen-activated protein kinase	5e-10
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	5e-10
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	5e-10
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	6e-10
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	8e-10
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	9e-10
3aln_A	327	Dual specificity mitogen-activated protein kinase;	1e-09
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	1e-09
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	1e-09
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	2e-09
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	2e-09
2a19_B	284	Interferon-induced, double-stranded RNA-activated	2e-09
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	2e-09
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	2e-09
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	3e-09
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	3e-09
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	3e-09
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	3e-09
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	4e-09
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	4e-09
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	6e-09
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	6e-09
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	6e-09
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	7e-09
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	7e-09
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	1e-08
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	1e-08
3fme_A	290	Dual specificity mitogen-activated protein kinase;	1e-08
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	1e-08
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-08
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	1e-08
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-08
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	7e-08
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	7e-08
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	2e-07
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	2e-07
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	2e-07
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	5e-07
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	5e-07
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	5e-07
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	6e-07
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	7e-07
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	2e-06
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	3e-06
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	3e-06
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	5e-06
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	7e-06
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	1e-05
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	3e-05
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	5e-05
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	6e-05
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	6e-05
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	7e-05
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	8e-05
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	1e-04
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	1e-04
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	2e-04
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	2e-04
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	2e-04
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	2e-04
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	2e-04
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	2e-04
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	3e-04
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	3e-04
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	3e-04
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	3e-04
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	3e-04
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	4e-04
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	4e-04
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	4e-04
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	5e-04
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	5e-04
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	5e-04
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	5e-04
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	6e-04
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	7e-04
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	7e-04
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	7e-04

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  108 bits (271), Expect = 3e-29
 Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 9/150 (6%)

Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
            N+LLD+N V  ++DFGI+K     DQ+   T    T+GY+ P EY  +GR++   DVYS
Sbjct: 168 INILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDP-EYFIKGRLTEKSDVYS 226

Query: 62  FGIMLMEAFTRKKPTDEMFS-GEMTLKRWINDLL-SVSVMEVVDANLLTREDRHFAAKQQ 119
           FG++L E    +    +      + L  W  +   +  + ++VD NL  +       K  
Sbjct: 227 FGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRK-- 284

Query: 120 CVSFVFNLAMECTIESPERRINAKEIVTEL 149
                 + A++C   S E R +  +++ +L
Sbjct: 285 ----FGDTAVKCLALSSEDRPSMGDVLWKL 310

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  106 bits (267), Expect = 1e-28
 Identities = 39/156 (25%), Positives = 74/156 (47%), Gaps = 12/156 (7%)

Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           +N+LLD+   A +SDFG+A+      Q++  ++ + T  YMAP E  R G ++   D+YS
Sbjct: 162 ANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAP-EALR-GEITPKSDIYS 219

Query: 62  FGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLS--VSVMEVVDANLLTREDRHFAAKQQ 119
           FG++L+E  T     DE       L     ++     ++ + +D  +    D    + + 
Sbjct: 220 FGVVLLEIITGLPAVDEH-REPQLLLDIKEEIEDEEKTIEDYIDKKM---NDADSTSVEA 275

Query: 120 CVSFVFNLAMECTIESPERRINAKEIVTELSKIRDS 155
                 ++A +C  E   +R + K++   L ++  S
Sbjct: 276 MY----SVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  104 bits (261), Expect = 1e-27
 Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 12/153 (7%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
            +N+LLD+   A + DFG+AKL+     +   T    TIG++AP EY   G+ S   DV+
Sbjct: 162 AANILLDEEFEAVVGDFGLAKLM-DYKDTHVTTAVRGTIGHIAP-EYLSTGKSSEKTDVF 219

Query: 61  SFGIMLMEAFTRKKPTDEMFSGE---MTLKRWINDLLSV-SVMEVVDANLLTREDRHFAA 116
            +G+ML+E  T ++  D         + L  W+  LL    +  +VD +L          
Sbjct: 220 GYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVE 279

Query: 117 KQQCVSFVFNLAMECTIESPERRINAKEIVTEL 149
           +      +  +A+ CT  SP  R    E+V  L
Sbjct: 280 Q------LIQVALLCTQSSPMERPKMSEVVRML 306

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 92.5 bits (230), Expect = 2e-23
 Identities = 37/158 (23%), Positives = 62/158 (39%), Gaps = 8/158 (5%)

Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNG---- 57
            NVLL +N+ A ++DFG+A        +      + T  YMAP E               
Sbjct: 160 KNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAP-EVLEGAINFQRDAFLR 218

Query: 58  -DVYSFGIMLMEAFTRKKPTDEMFSGEMT-LKRWINDLLSVSVM-EVVDANLLTREDRHF 114
            D+Y+ G++L E  +R    D      M   +  I    S+  M EVV         R +
Sbjct: 219 IDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDY 278

Query: 115 AAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
             K   ++ +     EC     E R++A  +   ++++
Sbjct: 279 WQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQM 316

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 79.3 bits (196), Expect = 1e-18
 Identities = 32/154 (20%), Positives = 60/154 (38%), Gaps = 17/154 (11%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP--VEYGREGRVSTNGD 58
            +N+ L ++    + DFG+A        S    Q   +I +MAP  +        S   D
Sbjct: 148 SNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSD 207

Query: 59  VYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQ 118
           VY+FGI+L E  T + P   + + +              ++E+V     +        + 
Sbjct: 208 VYAFGIVLYELMTGQLPYSNINNRDQ-------------IIEMVGRG--SLSPDLSKVRS 252

Query: 119 QCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
            C   +  L  EC  +  + R +   I+ E+ ++
Sbjct: 253 NCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 78.7 bits (194), Expect = 3e-18
 Identities = 34/176 (19%), Positives = 64/176 (36%), Gaps = 17/176 (9%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA------TIGYMAP------VEYG 48
             NVL+ ++    +SDFG++  L G        +  A      TI YMAP      V   
Sbjct: 148 SRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLR 207

Query: 49  REGRVSTNGDVYSFGIMLMEAFTRKK---PTDEMFSGEMTLKRWINDLLSVSVME--VVD 103
                    D+Y+ G++  E F R     P + +   +M  +  + +  +   M+  V  
Sbjct: 208 DXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSR 267

Query: 104 ANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRN 159
                +    +      V  +     +C  +  E R+ A+     ++++     RN
Sbjct: 268 EKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERN 323

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 77.8 bits (192), Expect = 6e-18
 Identities = 38/157 (24%), Positives = 59/157 (37%), Gaps = 25/157 (15%)

Query: 1   PSNVLLDDNM-VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
           P N+LL     V  + DFG A      D     T    +  +MAP E       S   DV
Sbjct: 133 PPNLLLVAGGTVLKICDFGTAC-----DIQTHMTNNKGSAAWMAP-EVFEGSNYSEKCDV 186

Query: 60  YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQ 119
           +S+GI+L E  TR+KP DE+               +  +M  V               + 
Sbjct: 187 FSWGIILWEVITRRKPFDEI------------GGPAFRIMWAVHNGT------RPPLIKN 228

Query: 120 CVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
               + +L   C  + P +R + +EIV  ++ +    
Sbjct: 229 LPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF 265

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 75.9 bits (187), Expect = 3e-17
 Identities = 32/164 (19%), Positives = 59/164 (35%), Gaps = 8/164 (4%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA--TIGYMAP-----VEYGREGRV 53
             N+L+  N    ++D G+A   I +   +         T  YM P            + 
Sbjct: 170 SKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQS 229

Query: 54  STNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTR-EDR 112
               D+YSFG++L E   R      +   ++     +    S   M  +      R    
Sbjct: 230 YIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFP 289

Query: 113 HFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
           +  +  +C+  +  L  EC   +P  R+ A  +   L+K+ +S 
Sbjct: 290 NRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 75.0 bits (185), Expect = 5e-17
 Identities = 35/162 (21%), Positives = 61/162 (37%), Gaps = 36/162 (22%)

Query: 1   PSNVLLD-----DNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP-VEYGREGRVS 54
             N+ L        + A ++DFG+++         + +  L    +MAP      E   +
Sbjct: 152 SPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSGLLGNFQWMAPETIGAEEESYT 206

Query: 55  TNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTR----E 110
              D YSF ++L    T + P DE   G++             +  + +  L  R    E
Sbjct: 207 EKADTYSFAMILYTILTGEGPFDEYSYGKIKF-----------INMIREEGL--RPTIPE 253

Query: 111 DRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
           D        C   + N+   C    P++R +   IV ELS++
Sbjct: 254 D--------CPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 73.9 bits (182), Expect = 2e-16
 Identities = 34/157 (21%), Positives = 59/157 (37%), Gaps = 22/157 (14%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
             N+L+D      + DFG+++L      S        T  +MAP E  R+   +   DVY
Sbjct: 167 SPNLLVDKKYTVKVCDFGLSRLKASTFLSS--KSAAGTPEWMAP-EVLRDEPSNEKSDVY 223

Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           SFG++L E  T ++P   +                 +  +VV A  +  + +     +  
Sbjct: 224 SFGVILWELATLQQPWGNL-----------------NPAQVVAA--VGFKCKRLEIPRNL 264

Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLF 157
              V  +   C    P +R +   I+  L  +  S  
Sbjct: 265 NPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAV 301

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 73.0 bits (180), Expect = 2e-16
 Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 28/156 (17%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP--VEYGREGRVSTNGD 58
             +V++D++M A +S   +         S      +    ++AP  ++   E     + D
Sbjct: 141 SRSVMIDEDMTARISMADVKF-------SFQSPGRMYAPAWVAPEALQKKPEDTNRRSAD 193

Query: 59  VYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQ 118
           ++SF ++L E  TR+ P  ++ + E+              M+V        E        
Sbjct: 194 MWSFAVLLWELVTREVPFADLSNMEI-------------GMKVA------LEGLRPTIPP 234

Query: 119 QCVSFVFNLAMECTIESPERRINAKEIVTELSKIRD 154
                V  L   C  E P +R     IV  L K++D
Sbjct: 235 GISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 72.3 bits (178), Expect = 6e-16
 Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 8/84 (9%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQT-LATIGYMAPVEYGREGRVSTNGDV 59
           P N+L+  +  A+L DFGIA      D+ +TQ    + T+ YMAP E   E   +   D+
Sbjct: 162 PENILVSADDFAYLVDFGIASAT--TDEKLTQLGNTVGTLYYMAP-ERFSESHATYRADI 218

Query: 60  YSFGIMLMEAFTRKKPTDEMFSGE 83
           Y+   +L E  T   P    + G+
Sbjct: 219 YALTCVLYECLTGSPP----YQGD 238

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 70.8 bits (174), Expect = 2e-15
 Identities = 32/163 (19%), Positives = 56/163 (34%), Gaps = 14/163 (8%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA--TIGYMAPVE------YGREGR 52
             N+L+  N    ++D G+A +       +         T  YMAP E            
Sbjct: 141 SKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP-EVLDETIQVDCFD 199

Query: 53  VSTNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVME--VVDANLLTR- 109
                D+++FG++L E   R      +   +      + +  S   M   V       R 
Sbjct: 200 SYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQ--RP 257

Query: 110 EDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
              +       ++ +  L  EC  ++P  R+ A  I   L+KI
Sbjct: 258 NIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 70.8 bits (174), Expect = 2e-15
 Identities = 34/168 (20%), Positives = 58/168 (34%), Gaps = 31/168 (18%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA------------TIGYMAPVEYG 48
             N L+ +N    ++DFG+A+L++ E       ++L                +MAP E  
Sbjct: 136 SHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP-EMI 194

Query: 49  REGRVSTNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLT 108
                    DV+SFGI+L E   R     +                ++     V   L  
Sbjct: 195 NGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLP------------RTMDFGLNVRGFL-- 240

Query: 109 REDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
                +     C    F + + C    PE+R +  ++   L  +R  L
Sbjct: 241 ---DRYCP-PNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHL 284

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 68.8 bits (169), Expect = 1e-14
 Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 6/84 (7%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQT-LATIGYMAPVEYGREGRVSTNGDV 59
           P+N+++       + DFGIA+ +     S+TQT   + T  Y++P E  R   V    DV
Sbjct: 144 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP-EQARGDSVDARSDV 202

Query: 60  YSFGIMLMEAFTRKKPTDEMFSGE 83
           YS G +L E  T + P    F+G+
Sbjct: 203 YSLGCVLYEVLTGEPP----FTGD 222

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 68.0 bits (167), Expect = 2e-14
 Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 8/84 (9%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQT-LATIGYMAPVEYGREGRVSTNGDV 59
           P N+L+D N    + DFGIAK L   + S+TQT   L T+ Y +P E  +        D+
Sbjct: 139 PQNILIDSNKTLKIFDFGIAKAL--SETSLTQTNHVLGTVQYFSP-EQAKGEATDECTDI 195

Query: 60  YSFGIMLMEAFTRKKPTDEMFSGE 83
           YS GI+L E    + P    F+GE
Sbjct: 196 YSIGIVLYEMLVGEPP----FNGE 215

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 67.8 bits (166), Expect = 3e-14
 Identities = 23/163 (14%), Positives = 55/163 (33%), Gaps = 31/163 (19%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKL---LIGEDQSMTQTQTLATIGYMAP--------VEYGR 49
             NV  D+  V  ++DFG+  +   L    +          + ++AP             
Sbjct: 158 SKNVFYDNGKV-VITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEED 216

Query: 50  EGRVSTNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTR 109
           +   S + DV++ G +  E   R+ P    F              + +++  +   +   
Sbjct: 217 KLPFSKHSDVFALGTIWYELHAREWP----FKT----------QPAEAIIWQMGTGM--- 259

Query: 110 EDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
             +   ++      + ++ + C     E R    +++  L K+
Sbjct: 260 --KPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKL 300

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 66.0 bits (161), Expect = 1e-13
 Identities = 28/163 (17%), Positives = 52/163 (31%), Gaps = 8/163 (4%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA--TIGYMAP-----VEYGREGRV 53
             N+L+  N    ++D G+A        ++         T  YMAP         +    
Sbjct: 175 SKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFES 234

Query: 54  STNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTR-EDR 112
               D+Y+ G++  E   R          ++     +    SV  M  V      R    
Sbjct: 235 FKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIP 294

Query: 113 HFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDS 155
           +     + +  +  +  EC   +   R+ A  I   LS++   
Sbjct: 295 NRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 337

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 64.2 bits (157), Expect = 4e-13
 Identities = 32/160 (20%), Positives = 54/160 (33%), Gaps = 32/160 (20%)

Query: 1   PSNVLLD--------DNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGR 52
            SN+L+          N +  ++DFG+A+        M+         +MAP E  R   
Sbjct: 136 SSNILILQKVENGDLSNKILKITDFGLARE-WHRTTKMSAA---GAYAWMAP-EVIRASM 190

Query: 53  VSTNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDR 112
            S   DV+S+G++L E  T + P   +                   + V     +     
Sbjct: 191 FSKGSDVWSYGVLLWELLTGEVPFRGI-----------------DGLAVAYG--VAMNKL 231

Query: 113 HFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
                  C      L  +C    P  R +   I+ +L+ I
Sbjct: 232 ALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 62.3 bits (152), Expect = 3e-12
 Identities = 38/152 (25%), Positives = 60/152 (39%), Gaps = 22/152 (14%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N L+ +  V  +SDFG+++       + +       + + AP E    GR S+  DV+SF
Sbjct: 243 NCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAP-EALNYGRYSSESDVWSF 301

Query: 63  GIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           GI+L E F+    P   + + +                E V+     R        + C 
Sbjct: 302 GILLWETFSLGASPYPNLSNQQ--------------TREFVEKGG--RLPCP----ELCP 341

Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKIR 153
             VF L  +C    P +R +   I  EL  IR
Sbjct: 342 DAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 61.8 bits (150), Expect = 4e-12
 Identities = 37/151 (24%), Positives = 66/151 (43%), Gaps = 23/151 (15%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N+L+ +N+V  ++DFG+A+L I +++   +      I + AP E    GR +   DV+SF
Sbjct: 393 NILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKWTAP-EAALYGRFTIKSDVWSF 450

Query: 63  GIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           GI+L E  T+ + P   M + E              V++ V+               +C 
Sbjct: 451 GILLTELTTKGRVPYPGMVNRE--------------VLDQVERGY------RMPCPPECP 490

Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
             + +L  +C  + PE R   + +   L   
Sbjct: 491 ESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 521

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 61.2 bits (149), Expect = 6e-12
 Identities = 35/159 (22%), Positives = 68/159 (42%), Gaps = 22/159 (13%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N ++ ++    + DFG+ + +   D      + L  + +M+P E  ++G  +T  DV+SF
Sbjct: 168 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP-ESLKDGVFTTYSDVWSF 226

Query: 63  GIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G++L E  T  ++P    + G             +S  +V+       E         C 
Sbjct: 227 GVVLWEIATLAEQP----YQG-------------LSNEQVLR---FVMEGGLLDKPDNCP 266

Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNV 160
             +F L   C   +P+ R +  EI++ + +  +  FR V
Sbjct: 267 DMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 305

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 60.8 bits (148), Expect = 7e-12
 Identities = 31/155 (20%), Positives = 59/155 (38%), Gaps = 22/155 (14%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N +L D+M   ++DFG++K +   D           + ++A  E   +   ++  DV++F
Sbjct: 177 NCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI-ESLADRVYTSKSDVWAF 235

Query: 63  GIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G+ + E  TR   P    + G             V   E+ D              + C+
Sbjct: 236 GVTMWEIATRGMTP----YPG-------------VQNHEMYD---YLLHGHRLKQPEDCL 275

Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
             ++ +   C    P  R     +  +L K+ +SL
Sbjct: 276 DELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 60.9 bits (148), Expect = 7e-12
 Identities = 33/158 (20%), Positives = 70/158 (44%), Gaps = 12/158 (7%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLI-GEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           N+L+++     + DFG+ K+L   ++    +    + I + AP E   E + S   DV+S
Sbjct: 175 NILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAP-ESLTESKFSVASDVWS 233

Query: 62  FGIMLMEAFT---RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQ 118
           FG++L E FT   + K     F   +   +       + V  +++   L + +       
Sbjct: 234 FGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQ----MIVFHLIE---LLKNNGRLPRPD 286

Query: 119 QCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
            C   ++ +  EC   +  +R + +++   + +IRD +
Sbjct: 287 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM 324

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 60.8 bits (148), Expect = 8e-12
 Identities = 33/158 (20%), Positives = 71/158 (44%), Gaps = 12/158 (7%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLI-GEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           N+L+++     + DFG+ K+L   ++    +    + I + AP E   E + S   DV+S
Sbjct: 144 NILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAP-ESLTESKFSVASDVWS 202

Query: 62  FGIMLMEAFT---RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQ 118
           FG++L E FT   + K     F   +   +       + V  +++   L + +       
Sbjct: 203 FGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQ----MIVFHLIE---LLKNNGRLPRPD 255

Query: 119 QCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
            C   ++ +  EC   +  +R + +++   + +IRD++
Sbjct: 256 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 60.4 bits (147), Expect = 9e-12
 Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 13/157 (8%)

Query: 3   NVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           NVLLD++ +  + DFG+AK +  G +    +    + + + AP E  +E +     DV+S
Sbjct: 164 NVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAP-ECLKEYKFYYASDVWS 222

Query: 62  FGIMLMEAFT---RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQ 118
           FG+ L E  T     +     F   + + +       ++V+ + +  LL R +R      
Sbjct: 223 FGVTLYELLTHCDSSQSPPTKFLELIGIAQG-----QMTVLRLTE--LLERGER-LPRPD 274

Query: 119 QCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDS 155
           +C + V++L   C       R   + ++  L  + + 
Sbjct: 275 KCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEK 311

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 60.4 bits (147), Expect = 1e-11
 Identities = 29/155 (18%), Positives = 64/155 (41%), Gaps = 22/155 (14%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N +L ++M   ++DFG+++ +   D       +   + ++A  E   +   + + DV++F
Sbjct: 167 NCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLAL-ESLADNLYTVHSDVWAF 225

Query: 63  GIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G+ + E  TR + P    ++G             +   E+ +               +C+
Sbjct: 226 GVTMWEIMTRGQTP----YAG-------------IENAEIYN---YLIGGNRLKQPPECM 265

Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
             V++L  +C    P++R +   +  EL  I   L
Sbjct: 266 EEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 60.4 bits (147), Expect = 1e-11
 Identities = 28/153 (18%), Positives = 55/153 (35%), Gaps = 11/153 (7%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLAT--IGYMAPVEYGREGRVSTNGDVY 60
           NVL++      + DFG+ K  I  D+     +      + + AP E   + +     DV+
Sbjct: 156 NVLVESEHQVKIGDFGLTK-AIETDKEYYTVKDDRDSPVFWYAP-ECLMQSKFYIASDVW 213

Query: 61  SFGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQ 119
           SFG+ L E  T     +  M      +      +    ++  +      +E +       
Sbjct: 214 SFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTL------KEGKRLPCPPN 267

Query: 120 CVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
           C   V+ L  +C    P  R + + ++     +
Sbjct: 268 CPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 60.5 bits (147), Expect = 1e-11
 Identities = 37/151 (24%), Positives = 66/151 (43%), Gaps = 23/151 (15%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N+L+ +N+V  ++DFG+A+L I +++   +      I + AP E    GR +   DV+SF
Sbjct: 310 NILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKWTAP-EAALYGRFTIKSDVWSF 367

Query: 63  GIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           GI+L E  T+ + P   M + E              V++ V+               +C 
Sbjct: 368 GILLTELTTKGRVPYPGMVNRE--------------VLDQVE------RGYRMPCPPECP 407

Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
             + +L  +C  + PE R   + +   L   
Sbjct: 408 ESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 438

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 59.9 bits (146), Expect = 2e-11
 Identities = 35/151 (23%), Positives = 61/151 (40%), Gaps = 22/151 (14%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+       ++DFG+AKLL  E++          I +MA  E       +   DV+S+
Sbjct: 147 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL-ESILHRIYTHQSDVWSY 205

Query: 63  GIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G+ + E  T   KP D +                    E+    +L + +R       C 
Sbjct: 206 GVTVWELMTFGSKPYDGI-----------------PASEISS--ILEKGER-LPQPPICT 245

Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
             V+ +  +C +   + R   +E++ E SK+
Sbjct: 246 IDVYMIMRKCWMIDADSRPKFRELIIEFSKM 276

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 60.0 bits (145), Expect = 2e-11
 Identities = 38/164 (23%), Positives = 65/164 (39%), Gaps = 23/164 (14%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQS-MTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           NVLL +   A +SDFG++K L  +D     ++     + + AP E     + S+  DV+S
Sbjct: 466 NVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAP-ECINFRKFSSRSDVWS 524

Query: 62  FGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           +G+ + EA +  +KP  +M   E              VM  ++        R      +C
Sbjct: 525 YGVTMWEALSYGQKPYKKMKGPE--------------VMAFIEQG-----KR-MECPPEC 564

Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNVGADE 164
              ++ L  +C I   E R +   +   +     SL   V    
Sbjct: 565 PPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEGGS 608

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 59.8 bits (145), Expect = 2e-11
 Identities = 32/151 (21%), Positives = 58/151 (38%), Gaps = 23/151 (15%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N L+ +N +  ++DFG+++L +  D           I + AP E     + S   DV++F
Sbjct: 348 NCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAP-ESLAYNKFSIKSDVWAF 405

Query: 63  GIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G++L E  T    P   +   +              V E+++      +D      + C 
Sbjct: 406 GVLLWEIATYGMSPYPGIDLSQ--------------VYELLE------KDYRMERPEGCP 445

Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
             V+ L   C   +P  R +  EI      +
Sbjct: 446 EKVYELMRACWQWNPSDRPSFAEIHQAFETM 476

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 59.7 bits (144), Expect = 2e-11
 Identities = 18/121 (14%), Positives = 36/121 (29%), Gaps = 13/121 (10%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP----VEYGREGRVSTN 56
           P +++LD      L+ F       G        +  A     A             ++  
Sbjct: 239 PVDIVLDQRGGVFLTGFEHLVRD-GASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFA 297

Query: 57  GDVYSFGIMLMEAFTRKKP---TDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTR--ED 111
            D ++ G+ +   +    P      +   E   +   N  +   V  +++   L    ED
Sbjct: 298 FDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFRSCKN--IPQPVRALLEG-FLRYPKED 354

Query: 112 R 112
           R
Sbjct: 355 R 355

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 59.2 bits (144), Expect = 3e-11
 Identities = 29/158 (18%), Positives = 58/158 (36%), Gaps = 22/158 (13%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPVEYGREGRVSTNGDVYS 61
           N+LL    +  + DFG+ + L   D      +       + AP E  +    S   D + 
Sbjct: 151 NLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP-ESLKTRTFSHASDTWM 209

Query: 62  FGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           FG+ L E FT  ++P   +                 +  +++    + +E       + C
Sbjct: 210 FGVTLWEMFTYGQEPWIGL-----------------NGSQILHK--IDKEGERLPRPEDC 250

Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFR 158
              ++N+ ++C    PE R     +   L + + +  R
Sbjct: 251 PQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDMR 288

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 58.9 bits (143), Expect = 3e-11
 Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 22/151 (14%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVLL       ++DFG+A LL  +D+ +  ++    I +MA  E    G+ +   DV+S+
Sbjct: 145 NVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMAL-ESIHFGKYTHQSDVWSY 203

Query: 63  GIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G+ + E  T   +P   +                  + EV D  LL + +R  A  Q C 
Sbjct: 204 GVTVWELMTFGAEPYAGL-----------------RLAEVPD--LLEKGER-LAQPQICT 243

Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
             V+ + ++C +     R   KE+  E +++
Sbjct: 244 IDVYMVMVKCWMIDENIRPTFKELANEFTRM 274

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 58.9 bits (143), Expect = 4e-11
 Identities = 37/151 (24%), Positives = 66/151 (43%), Gaps = 22/151 (14%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+ +N V  ++DFG+A+ +   D     T     + +MAP E   +   +   DV+SF
Sbjct: 233 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP-EALFDRVYTHQSDVWSF 291

Query: 63  GIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G+++ E FT    P    + G             + V E+     L +E         C 
Sbjct: 292 GVLMWEIFTLGGSP----YPG-------------IPVEELFK---LLKEGHRMDKPANCT 331

Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
           + ++ +  +C    P +R   K++V +L +I
Sbjct: 332 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 59.1 bits (143), Expect = 5e-11
 Identities = 17/84 (20%), Positives = 27/84 (32%), Gaps = 15/84 (17%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQT-LATIGYMAPVEYGREGRVSTNGDV 59
           P N++L +  +  L D G           +        T G+ AP E  R    +   D+
Sbjct: 210 PENIMLTEEQLK-LIDLGAVS-------RINSFGYLYGTPGFQAP-EIVR-TGPTVATDI 259

Query: 60  YSFGIMLMEAFTRKKPTDEMFSGE 83
           Y+ G  L              +G 
Sbjct: 260 YTVGRTLAALTLDLPT----RNGR 279

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 58.0 bits (141), Expect = 7e-11
 Identities = 38/154 (24%), Positives = 69/154 (44%), Gaps = 22/154 (14%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N L+  N++  + DFG+++ +   D       T+  I +M P E     + +T  DV+SF
Sbjct: 163 NCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPP-ESIMYRKFTTESDVWSF 221

Query: 63  GIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G++L E FT  K+P    +               +S  EV++      + R     + C 
Sbjct: 222 GVILWEIFTYGKQP----WFQ-------------LSNTEVIE---CITQGRVLERPRVCP 261

Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKIRDS 155
             V+++ + C    P++R+N KEI   L  +  +
Sbjct: 262 KEVYDVMLGCWQREPQQRLNIKEIYKILHALGKA 295

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 58.1 bits (141), Expect = 7e-11
 Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 9/155 (5%)

Query: 3   NVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           N+L++      ++DFG+AKLL + +D  + +    + I + AP E   +   S   DV+S
Sbjct: 157 NILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP-ESLSDNIFSRQSDVWS 215

Query: 62  FGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           FG++L E FT   K           +    +      ++E++       E +   A   C
Sbjct: 216 FGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELL------EEGQRLPAPPAC 269

Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDS 155
            + V  L   C   SP+ R +   +  +L  +   
Sbjct: 270 PAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSG 304

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 57.8 bits (140), Expect = 9e-11
 Identities = 33/159 (20%), Positives = 67/159 (42%), Gaps = 24/159 (15%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLAT--IGYMAPVEYGREGRVSTNGDVY 60
           N +LD+     ++DFG+A+ +  ++      +T A   + +MA  E  +  + +T  DV+
Sbjct: 222 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL-ESLQTQKFTTKSDVW 280

Query: 61  SFGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQ 119
           SFG++L E  TR   P    +               V+  ++        + R     + 
Sbjct: 281 SFGVLLWELMTRGAPP----YPD-------------VNTFDITV---YLLQGRRLLQPEY 320

Query: 120 CVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFR 158
           C   ++ + ++C     E R +  E+V+ +S I  +   
Sbjct: 321 CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 359

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 57.6 bits (140), Expect = 1e-10
 Identities = 36/160 (22%), Positives = 65/160 (40%), Gaps = 23/160 (14%)

Query: 3   NVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           NVLL +   A +SDFG++K L   +     ++     + + AP E     + S+  DV+S
Sbjct: 140 NVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAP-ECINFRKFSSRSDVWS 198

Query: 62  FGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           +G+ + EA +  +KP  +M   E              VM  ++      + +      +C
Sbjct: 199 YGVTMWEALSYGQKPYKKMKGPE--------------VMAFIE------QGKRMECPPEC 238

Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNV 160
              ++ L  +C I   E R +   +   +     SL   V
Sbjct: 239 PPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKV 278

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 57.8 bits (140), Expect = 1e-10
 Identities = 41/151 (27%), Positives = 66/151 (43%), Gaps = 23/151 (15%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N+L+  ++V  ++DFG+A++ I +++   +      I + AP E    G  +   DV+SF
Sbjct: 314 NILVSASLVCKIADFGLARV-IEDNEYTAREGAKFPIKWTAP-EAINFGSFTIKSDVWSF 371

Query: 63  GIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           GI+LME  T  + P   M                 S  EV+ A  L R  R     + C 
Sbjct: 372 GILLMEIVTYGRIPYPGM-----------------SNPEVIRA--LERGYR-MPRPENCP 411

Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
             ++N+ M C    PE R   + I + L   
Sbjct: 412 EELYNIMMRCWKNRPEERPTFEYIQSVLDDF 442

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 57.3 bits (139), Expect = 1e-10
 Identities = 37/157 (23%), Positives = 63/157 (40%), Gaps = 25/157 (15%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLAT--IGYMAPVEYGREGRVSTNGDVY 60
           NVLL     A +SDFG++K  +  D++  + QT     + + AP E     + S+  DV+
Sbjct: 147 NVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAP-ECINYYKFSSKSDVW 204

Query: 61  SFGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQ 119
           SFG+++ EAF+  +KP   M   E              V  +++       +R       
Sbjct: 205 SFGVLMWEAFSYGQKPYRGMKGSE--------------VTAMLEKG-----ER-MGCPAG 244

Query: 120 CVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
           C   +++L   C     E R     +   L      +
Sbjct: 245 CPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 281

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 57.3 bits (139), Expect = 1e-10
 Identities = 30/159 (18%), Positives = 62/159 (38%), Gaps = 24/159 (15%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGED--QSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           N +LD++    ++DFG+A+ ++  +             + + A  E  +  R +T  DV+
Sbjct: 154 NCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTAL-ESLQTYRFTTKSDVW 212

Query: 61  SFGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQ 119
           SFG++L E  TR   P    +               +   ++        + R     + 
Sbjct: 213 SFGVLLWELLTRGAPP----YRH-------------IDPFDLTH---FLAQGRRLPQPEY 252

Query: 120 CVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFR 158
           C   ++ +  +C    P  R   + +V E+ +I  +L  
Sbjct: 253 CPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLG 291

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 56.8 bits (138), Expect = 1e-10
 Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 23/154 (14%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N L+ +N V  +SDFG+ +  + +DQ  + T T   + + +P E     R S+  DV+SF
Sbjct: 134 NCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASP-EVFSFSRYSSKSDVWSF 191

Query: 63  GIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G+++ E F+  K P +                   S  EVV+   ++   R     +   
Sbjct: 192 GVLMWEVFSEGKIPYENR-----------------SNSEVVED--ISTGFR-LYKPRLAS 231

Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKIRDS 155
           + V+ +   C  E PE R     ++ +L++I +S
Sbjct: 232 THVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 57.0 bits (138), Expect = 2e-10
 Identities = 35/151 (23%), Positives = 62/151 (41%), Gaps = 22/151 (14%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+       ++DFG+AKLL  E++          I +MA  E       +   DV+S+
Sbjct: 147 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL-ESILHRIYTHQSDVWSY 205

Query: 63  GIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G+ + E  T   KP D +                    E+    +L + +R       C 
Sbjct: 206 GVTVWELMTFGSKPYDGI-----------------PASEISS--ILEKGER-LPQPPICT 245

Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
             V+ + ++C +   + R   +E++ E SK+
Sbjct: 246 IDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 56.9 bits (138), Expect = 2e-10
 Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 22/154 (14%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N L+   +V  + DFG+++ +   D      +T+  I +M P E     + +T  DV+SF
Sbjct: 188 NCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPP-ESILYRKFTTESDVWSF 246

Query: 63  GIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G++L E FT  K+P  ++                 S  E +D      + R     + C 
Sbjct: 247 GVVLWEIFTYGKQPWYQL-----------------SNTEAID---CITQGRELERPRACP 286

Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKIRDS 155
             V+ +   C    P++R + K++   L  +  +
Sbjct: 287 PEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 56.9 bits (138), Expect = 2e-10
 Identities = 32/158 (20%), Positives = 66/158 (41%), Gaps = 24/158 (15%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGED--QSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           N +LD+     ++DFG+A+ +  ++      +T     + +MA  E  +  + +T  DV+
Sbjct: 158 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL-ESLQTQKFTTKSDVW 216

Query: 61  SFGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQ 119
           SFG++L E  TR   P    +               V+  ++        + R     + 
Sbjct: 217 SFGVLLWELMTRGAPP----YPD-------------VNTFDITV---YLLQGRRLLQPEY 256

Query: 120 CVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLF 157
           C   ++ + ++C     E R +  E+V+ +S I  +  
Sbjct: 257 CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 56.1 bits (136), Expect = 3e-10
 Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 22/153 (14%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+ D +   +SD G+ + +   D       +L  I +MAP E    G+ S + D++S+
Sbjct: 158 NVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAP-EAIMYGKFSIDSDIWSY 216

Query: 63  GIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G++L E F+   +P    + G              S  +VV+   + R  +       C 
Sbjct: 217 GVVLWEVFSYGLQP----YCG-------------YSNQDVVE---MIRNRQVLPCPDDCP 256

Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKIRD 154
           ++V+ L +EC  E P RR   K+I + L    +
Sbjct: 257 AWVYALMIECWNEFPSRRPRFKDIHSRLRAWGN 289

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 56.1 bits (136), Expect = 3e-10
 Identities = 37/151 (24%), Positives = 66/151 (43%), Gaps = 22/151 (14%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+ +N V  ++DFG+A+ +   D     T     + +MAP E   +   +   DV+SF
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP-EALFDRVYTHQSDVWSF 245

Query: 63  GIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G+++ E FT    P    + G             + V E+     L +E         C 
Sbjct: 246 GVLMWEIFTLGGSP----YPG-------------IPVEELFK---LLKEGHRMDKPANCT 285

Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
           + ++ +  +C    P +R   K++V +L +I
Sbjct: 286 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 56.2 bits (136), Expect = 4e-10
 Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 22/154 (14%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N L+ +NMV  ++DFG+++ +   D           I +M P E     R +T  DV+++
Sbjct: 204 NCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPP-ESIFYNRYTTESDVWAY 262

Query: 63  GIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G++L E F+   +P    + G             ++  EV+      R+    A  + C 
Sbjct: 263 GVVLWEIFSYGLQP----YYG-------------MAHEEVIY---YVRDGNILACPENCP 302

Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKIRDS 155
             ++NL   C  + P  R +   I   L ++ + 
Sbjct: 303 LELYNLMRLCWSKLPADRPSFCSIHRILQRMCER 336

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 56.1 bits (136), Expect = 4e-10
 Identities = 31/157 (19%), Positives = 61/157 (38%), Gaps = 21/157 (13%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVLL +  VA + DFG+A+ ++ +   + +      + +MAP E   +   +   DV+S+
Sbjct: 194 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAP-ESIFDCVYTVQSDVWSY 252

Query: 63  GIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           GI+L E F+    P    + G +   ++   +     M                      
Sbjct: 253 GILLWEIFSLGLNP----YPGILVNSKFYKLVKDGYQMA---------------QPAFAP 293

Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFR 158
             ++++   C    P  R   ++I + L +      R
Sbjct: 294 KNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDRR 330

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 56.2 bits (136), Expect = 4e-10
 Identities = 38/159 (23%), Positives = 72/159 (45%), Gaps = 27/159 (16%)

Query: 3   NVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           N+L++ N+V  +SDFG+ ++L    + + T       I + +P E     + ++  DV+S
Sbjct: 177 NILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSP-EAIAYRKFTSASDVWS 235

Query: 62  FGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           +GI+L E  +  ++P  EM + +              V++ VD      E         C
Sbjct: 236 YGIVLWEVMSYGERPYWEMSNQD--------------VIKAVD------EGYRLPPPMDC 275

Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRN 159
            + ++ L ++C  +    R   ++IV+ L K    L RN
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVSILDK----LIRN 310

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 56.4 bits (136), Expect = 4e-10
 Identities = 33/154 (21%), Positives = 59/154 (38%), Gaps = 23/154 (14%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+  N    L DFG+++  + +      ++    I +MAP E     R ++  DV+ F
Sbjct: 521 NVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWMAP-ESINFRRFTSASDVWMF 578

Query: 63  GIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G+ + E      KP   +                    +V+    +   +R       C 
Sbjct: 579 GVCMWEILMHGVKPFQGV-----------------KNNDVI--GRIENGER-LPMPPNCP 618

Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKIRDS 155
             +++L  +C    P RR    E+  +LS I + 
Sbjct: 619 PTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 55.8 bits (135), Expect = 5e-10
 Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 7/72 (9%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP----VEYGREGRVSTN 56
           PSN+LLD+     L DFGI+  L+       + ++     YMAP         +      
Sbjct: 153 PSNILLDERGQIKLCDFGISGRLV---DDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIR 209

Query: 57  GDVYSFGIMLME 68
            DV+S GI L+E
Sbjct: 210 ADVWSLGISLVE 221

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 55.8 bits (135), Expect = 5e-10
 Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 22/151 (14%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+ ++ V  ++DFG+A+ +   D     T     + +MAP E   +   +   DV+SF
Sbjct: 221 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP-EALFDRIYTHQSDVWSF 279

Query: 63  GIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G++L E FT    P   +                  V E+     L +E         C 
Sbjct: 280 GVLLWEIFTLGGSPYPGV-----------------PVEELFK---LLKEGHRMDKPSNCT 319

Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
           + ++ +  +C    P +R   K++V +L +I
Sbjct: 320 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 55.3 bits (134), Expect = 5e-10
 Identities = 32/154 (20%), Positives = 59/154 (38%), Gaps = 23/154 (14%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+  N    L DFG+++  + +      ++    I +MAP E     R ++  DV+ F
Sbjct: 146 NVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAP-ESINFRRFTSASDVWMF 203

Query: 63  GIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G+ + E      KP   + + +              V+  ++                C 
Sbjct: 204 GVCMWEILMHGVKPFQGVKNND--------------VIGRIE------NGERLPMPPNCP 243

Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKIRDS 155
             +++L  +C    P RR    E+  +LS I + 
Sbjct: 244 PTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 277

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 55.4 bits (134), Expect = 6e-10
 Identities = 30/151 (19%), Positives = 59/151 (39%), Gaps = 21/151 (13%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N+LL +  V  + DFG+A+ +  +   + +      + +MAP E   +   +   DV+SF
Sbjct: 178 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP-ETIFDRVYTIQSDVWSF 236

Query: 63  GIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G++L E F+    P   +   E   +R            + +   +   D          
Sbjct: 237 GVLLWEIFSLGASPYPGVKIDEEFCRR------------LKEGTRMRAPD-------YTT 277

Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
             ++   ++C    P +R    E+V  L  +
Sbjct: 278 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 55.0 bits (133), Expect = 8e-10
 Identities = 37/152 (24%), Positives = 66/152 (43%), Gaps = 23/152 (15%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIG-EDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
           NVL+D N+V  +SDFG++++L    D + T T     I + AP E       S+  DV+S
Sbjct: 181 NVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAP-EAIAFRTFSSASDVWS 239

Query: 62  FGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           FG+++ E     ++P   M                 +  +V+ +  +    R   A   C
Sbjct: 240 FGVVMWEVLAYGERPYWNM-----------------TNRDVISS--VEEGYR-LPAPMGC 279

Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
              +  L ++C  +   +R    +IV+ L  +
Sbjct: 280 PHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 54.9 bits (133), Expect = 9e-10
 Identities = 32/151 (21%), Positives = 65/151 (43%), Gaps = 22/151 (14%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N+L+ +     +SDFG+++ +  ED  + ++Q    + +MA  E   +   +T  DV+SF
Sbjct: 180 NILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAI-ESLFDHIYTTQSDVWSF 238

Query: 63  GIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G++L E  T    P    + G             +    + +   L +          C 
Sbjct: 239 GVLLWEIVTLGGNP----YPG-------------IPPERLFN---LLKTGHRMERPDNCS 278

Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
             ++ L ++C  + P++R    +I  +L K+
Sbjct: 279 EEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 55.0 bits (133), Expect = 1e-09
 Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 6/71 (8%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP---VEYGREGRVSTNG 57
           PSN+LLD +    L DFGI+  L+    S+ +T+      YMAP                
Sbjct: 154 PSNILLDRSGNIKLCDFGISGQLV---DSIAKTRDAGCRPYMAPERIDPSASRQGYDVRS 210

Query: 58  DVYSFGIMLME 68
           DV+S GI L E
Sbjct: 211 DVWSLGITLYE 221

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 54.3 bits (131), Expect = 1e-09
 Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 23/152 (15%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPVEYGREGRVSTNGDVYS 61
           N+L++ N+V  +SDFG++++L  + ++   T      I + AP E     + ++  DV+S
Sbjct: 177 NILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAP-EAISYRKFTSASDVWS 235

Query: 62  FGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           FGI++ E  T  ++P  E+                 S  EV+ A  +    R       C
Sbjct: 236 FGIVMWEVMTYGERPYWEL-----------------SNHEVMKA--INDGFR-LPTPMDC 275

Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
            S ++ L M+C  +   RR    +IV+ L K+
Sbjct: 276 PSAIYQLMMQCWQQERARRPKFADIVSILDKL 307

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 54.3 bits (131), Expect = 1e-09
 Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 3/75 (4%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
             N+ L  +    L DFGIA++L      + +     T  Y++P E       +   D++
Sbjct: 153 SQNIFLTKDGTVQLGDFGIARVL-NSTVELARACI-GTPYYLSP-EICENKPYNNKSDIW 209

Query: 61  SFGIMLMEAFTRKKP 75
           + G +L E  T K  
Sbjct: 210 ALGCVLYELCTLKHA 224

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 54.3 bits (130), Expect = 2e-09
 Identities = 16/147 (10%), Positives = 35/147 (23%), Gaps = 18/147 (12%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP-VEYGREGRVSTNGDV 59
           P N+ +  +    L D       +G     +       + Y             +   + 
Sbjct: 222 PDNLFIMPDGRLMLGDVSALW-KVGTRGPASSV----PVTYAPREFLNASTATFTHALNA 276

Query: 60  YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQ 119
           +  G+ +   +    P    F         +         +     +   +   F +   
Sbjct: 277 WQLGLSIYRVWCLFLP----F--------GLVTPGIKGSWKRPSLRVPGTDSLAFGSCTP 324

Query: 120 CVSFVFNLAMECTIESPERRINAKEIV 146
              FV  L          RR+   E +
Sbjct: 325 LPDFVKTLIGRFLNFDRRRRLLPLEAM 351

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 54.2 bits (131), Expect = 2e-09
 Identities = 29/159 (18%), Positives = 58/159 (36%), Gaps = 21/159 (13%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N+LL    +  + DFG+A+ +  +   + +      + +MAP E       +   DV+S+
Sbjct: 175 NILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAP-ESIFNCVYTFESDVWSY 233

Query: 63  GIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           GI L E F+    P   M       K             + +   +   +          
Sbjct: 234 GIFLWELFSLGSSPYPGMPVDSKFYKM------------IKEGFRMLSPE-------HAP 274

Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNV 160
           + ++++   C    P +R   K+IV  + K       ++
Sbjct: 275 AEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNHI 313

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 53.8 bits (130), Expect = 2e-09
 Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 14/84 (16%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP-----VEYGREGRVST 55
           PSN+ L D     + DFG+   L        +T++  T+ YM+P      +YG+E     
Sbjct: 150 PSNIFLVDTKQVKIGDFGLVTSL---KNDGKRTRSKGTLRYMSPEQISSQDYGKE----- 201

Query: 56  NGDVYSFGIMLMEAFTRKKPTDEM 79
             D+Y+ G++L E         E 
Sbjct: 202 -VDLYALGLILAELLHVCDTAFET 224

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 53.7 bits (130), Expect = 2e-09
 Identities = 31/151 (20%), Positives = 58/151 (38%), Gaps = 23/151 (15%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N+L+       L DFG+++  I ++     + T   I +M+P E     R +T  DV+ F
Sbjct: 143 NILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSP-ESINFRRFTTASDVWMF 200

Query: 63  GIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
            + + E  +  K+P   + + +              V+ V++      +         C 
Sbjct: 201 AVCMWEILSFGKQPFFWLENKD--------------VIGVLE------KGDRLPKPDLCP 240

Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
             ++ L   C    P  R    E+V  LS +
Sbjct: 241 PVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 271

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 53.8 bits (130), Expect = 2e-09
 Identities = 33/151 (21%), Positives = 59/151 (39%), Gaps = 23/151 (15%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N L+ +N +  ++DFG+++L +  D           I + AP E     + S   DV++F
Sbjct: 141 NCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAP-ESLAYNKFSIKSDVWAF 198

Query: 63  GIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G++L E  T    P   +                  + +V +  LL ++ R     + C 
Sbjct: 199 GVLLWEIATYGMSPYPGI-----------------DLSQVYE--LLEKDYR-MERPEGCP 238

Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
             V+ L   C   +P  R +  EI      +
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAEIHQAFETM 269

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 53.4 bits (129), Expect = 3e-09
 Identities = 26/154 (16%), Positives = 61/154 (39%), Gaps = 23/154 (14%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N L++D  V  +SDFG+++  + +D+  +   +   + +  P E     + S+  D+++F
Sbjct: 150 NCLVNDQGVVKVSDFGLSRY-VLDDEYTSSVGSKFPVRWSPP-EVLMYSKFSSKSDIWAF 207

Query: 63  GIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           G+++ E ++  K P +   + E                E +       +           
Sbjct: 208 GVLMWEIYSLGKMPYERFTNSE--------------TAEHIA------QGLRLYRPHLAS 247

Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKIRDS 155
             V+ +   C  E  + R   K +++ +  + D 
Sbjct: 248 EKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 53.9 bits (130), Expect = 3e-09
 Identities = 33/157 (21%), Positives = 55/157 (35%), Gaps = 25/157 (15%)

Query: 3   NVLLD---DNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
           N LL       VA + DFG+A+ +            +  + +M P E   EG  ++  D 
Sbjct: 170 NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP-EAFMEGIFTSKTDT 228

Query: 60  YSFGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQ 118
           +SFG++L E F+    P    +                S  EV++              +
Sbjct: 229 WSFGVLLWEIFSLGYMP----YPS-------------KSNQEVLE---FVTSGGRMDPPK 268

Query: 119 QCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDS 155
            C   V+ +  +C    PE R N   I+  +      
Sbjct: 269 NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 53.8 bits (129), Expect = 3e-09
 Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 1/69 (1%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N+LL +  V  + DFG+A+ +  +   + +      + +MAP E   +   +   DV+SF
Sbjct: 223 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP-ETIFDRVYTIQSDVWSF 281

Query: 63  GIMLMEAFT 71
           G++L E F+
Sbjct: 282 GVLLWEIFS 290

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 53.5 bits (129), Expect = 3e-09
 Identities = 39/154 (25%), Positives = 63/154 (40%), Gaps = 27/154 (17%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+ ++ VA +SDFG+ K     + S TQ      + + AP E  RE + ST  DV+SF
Sbjct: 319 NVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAP-EALREKKFSTKSDVWSF 372

Query: 63  GIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           GI+L E ++  + P   +                  + +VV       +     A   C 
Sbjct: 373 GILLWEIYSFGRVPYPRI-----------------PLKDVVP---RVEKGYKMDAPDGCP 412

Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKIRDS 155
             V+++   C       R    ++  +L  IR  
Sbjct: 413 PAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 53.2 bits (128), Expect = 4e-09
 Identities = 33/157 (21%), Positives = 55/157 (35%), Gaps = 25/157 (15%)

Query: 3   NVLLD---DNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
           N LL       VA + DFG+A+ +            +  + +M P E   EG  ++  D 
Sbjct: 211 NCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP-EAFMEGIFTSKTDT 269

Query: 60  YSFGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQ 118
           +SFG++L E F+    P    +                S  EV++              +
Sbjct: 270 WSFGVLLWEIFSLGYMP----YPS-------------KSNQEVLE---FVTSGGRMDPPK 309

Query: 119 QCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDS 155
            C   V+ +  +C    PE R N   I+  +      
Sbjct: 310 NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 53.0 bits (128), Expect = 4e-09
 Identities = 33/153 (21%), Positives = 67/153 (43%), Gaps = 23/153 (15%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N L+D ++   +SDFG+ +  + +DQ ++   T   + + AP E     + S+  DV++F
Sbjct: 134 NCLVDRDLCVKVSDFGMTRY-VLDDQYVSSVGTKFPVKWSAP-EVFHYFKYSSKSDVWAF 191

Query: 63  GIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           GI++ E F+  K P D   + E              V+  V       +           
Sbjct: 192 GILMWEVFSLGKMPYDLYTNSE--------------VVLKVS------QGHRLYRPHLAS 231

Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKIRD 154
             ++ +   C  E PE+R   +++++ +  +R+
Sbjct: 232 DTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 52.7 bits (127), Expect = 6e-09
 Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 3/75 (4%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P+NV LD      L DFG+A++L   D S  +T  + T  YM+P E       +   D++
Sbjct: 144 PANVFLDGKQNVKLGDFGLARIL-NHDTSFAKTF-VGTPYYMSP-EQMNRMSYNEKSDIW 200

Query: 61  SFGIMLMEAFTRKKP 75
           S G +L E      P
Sbjct: 201 SLGCLLYELCALMPP 215

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 52.8 bits (127), Expect = 6e-09
 Identities = 32/155 (20%), Positives = 61/155 (39%), Gaps = 29/155 (18%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP----------VEYGRE 50
           P+N L+ D M+  L DFGIA  +  +  S+ +   + T+ YM P               +
Sbjct: 136 PANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSK 194

Query: 51  GRVSTNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTRE 110
            ++S   DV+S G +L      K P  ++ +    L   I+    +   ++ + +L    
Sbjct: 195 SKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQ--- 251

Query: 111 DRHFAAKQQCVSFVFNLAMECTIESPERRINAKEI 145
                          ++   C    P++RI+  E+
Sbjct: 252 ---------------DVLKCCLKRDPKQRISIPEL 271

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 52.9 bits (127), Expect = 6e-09
 Identities = 31/155 (20%), Positives = 60/155 (38%), Gaps = 29/155 (18%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP----------VEYGRE 50
           P+N L+ D M+  L DFGIA  +  +  S+ +   +  + YM P               +
Sbjct: 183 PANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSK 241

Query: 51  GRVSTNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTRE 110
            ++S   DV+S G +L      K P  ++ +    L   I+    +   ++ + +L    
Sbjct: 242 SKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQ--- 298

Query: 111 DRHFAAKQQCVSFVFNLAMECTIESPERRINAKEI 145
                          ++   C    P++RI+  E+
Sbjct: 299 ---------------DVLKCCLKRDPKQRISIPEL 318

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 52.2 bits (126), Expect = 7e-09
 Identities = 37/151 (24%), Positives = 62/151 (41%), Gaps = 23/151 (15%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N+L+ D +   ++DFG+A+L I +++   +      I + AP E    G  +   DV+SF
Sbjct: 139 NILVSDTLSCKIADFGLARL-IEDNEYTAREGAKFPIKWTAP-EAINYGTFTIKSDVWSF 196

Query: 63  GIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           GI+L E  T  + P   M + E              V++ ++     R  R       C 
Sbjct: 197 GILLTEIVTHGRIPYPGMTNPE--------------VIQNLERGY--RMVR----PDNCP 236

Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
             ++ L   C  E PE R     + + L   
Sbjct: 237 EELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 52.5 bits (126), Expect = 7e-09
 Identities = 18/83 (21%), Positives = 35/83 (42%), Gaps = 8/83 (9%)

Query: 1   PSNVLL-----DDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP--VEYGREGR 52
           P N+L+        + A +SDFG+ K L     S ++   +  T G++AP  +    +  
Sbjct: 146 PHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKEN 205

Query: 53  VSTNGDVYSFGIMLMEAFTRKKP 75
            +   D++S G +     +    
Sbjct: 206 PTYTVDIFSAGCVFYYVISEGSH 228

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 51.8 bits (124), Expect = 1e-08
 Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 11/89 (12%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA----------TIGYMAPVEYGRE 50
           PSN+    + V  + DFG+   +  +++  T    +           T  YM+P E    
Sbjct: 192 PSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSP-EQIHG 250

Query: 51  GRVSTNGDVYSFGIMLMEAFTRKKPTDEM 79
              S   D++S G++L E         E 
Sbjct: 251 NNYSHKVDIFSLGLILFELLYSFSTQMER 279

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 51.9 bits (125), Expect = 1e-08
 Identities = 27/151 (17%), Positives = 55/151 (36%), Gaps = 21/151 (13%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+    V  + DFG+A+ ++ +   + +      + +MAP E   EG  +   DV+S+
Sbjct: 202 NVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAP-ESLFEGIYTIKSDVWSY 260

Query: 63  GIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           GI+L E F+    P   +       K             + +   + +            
Sbjct: 261 GILLWEIFSLGVNPYPGIPVDANFYKL------------IQNGFKMDQPF-------YAT 301

Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
             ++ +   C      +R +   + + L   
Sbjct: 302 EEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQ 332

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 51.9 bits (125), Expect = 1e-08
 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 6/71 (8%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP---VEYGREGRVSTNG 57
           PSNVL++      + DFGI+  L+     + +        YMAP        +   S   
Sbjct: 138 PSNVLINALGQVKMCDFGISGYLV---DDVAKDIDAGCKPYMAPERINPELNQKGYSVKS 194

Query: 58  DVYSFGIMLME 68
           D++S GI ++E
Sbjct: 195 DIWSLGITMIE 205

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 51.8 bits (124), Expect = 1e-08
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 5/75 (6%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           PSN+L++      L DFG++  LI    SM  +  + T  YM+P E  +    S   D++
Sbjct: 160 PSNILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSP-ERLQGTHYSVQSDIW 214

Query: 61  SFGIMLMEAFTRKKP 75
           S G+ L+E    + P
Sbjct: 215 SMGLSLVEMAVGRYP 229

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 51.5 bits (124), Expect = 1e-08
 Identities = 32/155 (20%), Positives = 61/155 (39%), Gaps = 29/155 (18%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP----------VEYGRE 50
           P+N L+ D M+  L DFGIA  +  +  S+ +   + T+ YM P               +
Sbjct: 155 PANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSK 213

Query: 51  GRVSTNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTRE 110
            ++S   DV+S G +L      K P  ++ +    L   I+    +   ++ + +L    
Sbjct: 214 SKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQ--- 270

Query: 111 DRHFAAKQQCVSFVFNLAMECTIESPERRINAKEI 145
                          ++   C    P++RI+  E+
Sbjct: 271 ---------------DVLKCCLKRDPKQRISIPEL 290

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 51.4 bits (124), Expect = 1e-08
 Identities = 38/154 (24%), Positives = 65/154 (42%), Gaps = 27/154 (17%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           NVL+ ++ VA +SDFG+ K     + S TQ      + + AP E  RE + ST  DV+SF
Sbjct: 147 NVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAP-EALREKKFSTKSDVWSF 200

Query: 63  GIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
           GI+L E ++  + P   +                  + +VV    + +  +   A   C 
Sbjct: 201 GILLWEIYSFGRVPYPRI-----------------PLKDVVPR--VEKGYK-MDAPDGCP 240

Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKIRDS 155
             V+ +   C       R +  ++  +L  I+  
Sbjct: 241 PAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 50.8 bits (122), Expect = 2e-08
 Identities = 19/76 (25%), Positives = 30/76 (39%), Gaps = 7/76 (9%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDV 59
           P+N+ L       L DFG+   L     +    +       YMAP E  +     T  DV
Sbjct: 185 PANIFLGPRGRCKLGDFGLLVEL----GTAGAGEVQEGDPRYMAP-ELLQGSY-GTAADV 238

Query: 60  YSFGIMLMEAFTRKKP 75
           +S G+ ++E     + 
Sbjct: 239 FSLGLTILEVACNMEL 254

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 49.7 bits (119), Expect = 7e-08
 Identities = 20/79 (25%), Positives = 28/79 (35%), Gaps = 5/79 (6%)

Query: 1   PSNVLLDDN-MVAHLSDFGIAKLLIGEDQSMTQTQTLATIG---YMAPVEYGREGRVSTN 56
             NVLL  +   A L DFG A  L  +    +        G   +MAP E          
Sbjct: 178 ADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAP-EVVMGKPCDAK 236

Query: 57  GDVYSFGIMLMEAFTRKKP 75
            D++S   M++       P
Sbjct: 237 VDIWSSCCMMLHMLNGCHP 255

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 49.6 bits (119), Expect = 7e-08
 Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 3/75 (4%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P+NV +    V  L D G+ +       +   +    T  YM+P E   E   +   D++
Sbjct: 164 PANVFITATGVVKLGDLGLGRFF-SSKTTAAHSLV-GTPYYMSP-ERIHENGYNFKSDIW 220

Query: 61  SFGIMLMEAFTRKKP 75
           S G +L E    + P
Sbjct: 221 SLGCLLYEMAALQSP 235

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 48.1 bits (114), Expect = 2e-07
 Identities = 19/127 (14%), Positives = 41/127 (32%), Gaps = 24/127 (18%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP----------VEYGRE 50
           P +++LD      L+ F         D +   +    + G+  P              R 
Sbjct: 234 PVDIVLDQRGGVFLTGFEHLV----RDGARVVSSV--SRGFEPPELEARRATISYHRDRR 287

Query: 51  GRVSTNGDVYSFGIMLMEAFTRKKP---TDEMFSGEMTLKRWINDLLSVSVMEVVDANLL 107
             ++ + D ++ G+++   +    P      +   E   +   N  +   V  ++    L
Sbjct: 288 TLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIFRSCKN--IPQPVRALL-EGFL 344

Query: 108 TR--EDR 112
               EDR
Sbjct: 345 RYPKEDR 351

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 48.3 bits (115), Expect = 2e-07
 Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 14/89 (15%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDV 59
           P+N+LLD++    +SD G+A     +     +      T GYMAP    +     ++ D 
Sbjct: 320 PANILLDEHGHVRISDLGLACDFSKK-----KPHASVGTHGYMAPEVLQKGVAYDSSADW 374

Query: 60  YSFGIMLMEAFT--------RKKPTDEMF 80
           +S G ML +           + K   E+ 
Sbjct: 375 FSLGCMLFKLLRGHSPFRQHKTKDKHEID 403

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 48.2 bits (115), Expect = 2e-07
 Identities = 30/95 (31%), Positives = 40/95 (42%), Gaps = 24/95 (25%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP-----VEYGREGRVS 54
           P NVLLDD+    +SD G+A  L       T+T+  A T G+MAP      EY     V 
Sbjct: 317 PENVLLDDDGNVRISDLGLAVELKAGQ---TKTKGYAGTPGFMAPELLLGEEYDFS--V- 370

Query: 55  TNGDVYSFGIMLME---------AFTRKKPTDEMF 80
              D ++ G+ L E         A   K    E+ 
Sbjct: 371 ---DYFALGVTLYEMIAARGPFRARGEKVENKELK 402

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 47.0 bits (112), Expect = 5e-07
 Identities = 28/146 (19%), Positives = 52/146 (35%), Gaps = 31/146 (21%)

Query: 3   NVLLD-DNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIG---YMAPVEYGREGRVSTNGD 58
           N+ +        + D G+A L          +   A IG   +MAP E   E     + D
Sbjct: 161 NIFITGPTGSVKIGDLGLATL-------KRASFAKAVIGTPEFMAP-EMYEEK-YDESVD 211

Query: 59  VYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQ 118
           VY+FG+ ++E  T + P  E  +     +R  + +   S  +V    +     +      
Sbjct: 212 VYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEV-----KEIIEG- 265

Query: 119 QCVSFVFNLAMECTIESPERRINAKE 144
                       C  ++ + R + K+
Sbjct: 266 ------------CIRQNKDERYSIKD 279

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 47.3 bits (113), Expect = 5e-07
 Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 19/77 (24%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP--------VEYGREG 51
           P N+LLD++   H++DF IA +L  E    TQ  T+A T  YMAP          Y    
Sbjct: 143 PDNILLDEHGHVHITDFNIAAMLPRE----TQITTMAGTKPYMAPEMFSSRKGAGYSFA- 197

Query: 52  RVSTNGDVYSFGIMLME 68
            V    D +S G+   E
Sbjct: 198 -V----DWWSLGVTAYE 209

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 46.9 bits (112), Expect = 5e-07
 Identities = 27/170 (15%), Positives = 52/170 (30%), Gaps = 57/170 (33%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLL--------IGEDQSMTQTQTLAT-IG---YMAP---- 44
           P N+ +D++    + DFG+AK +        +        +  L + IG   Y+A     
Sbjct: 144 PMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLD 203

Query: 45  --VEYGREGRVSTNGDVYSFGIMLME-------AFTRKKPTDEMFSGEMTLKRWINDLLS 95
               Y  +       D+YS GI+  E          R     ++ S  +      +D   
Sbjct: 204 GTGHYNEK------IDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDNKM 257

Query: 96  VSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEI 145
               +++   L+                            P +R  A+ +
Sbjct: 258 KVEKKIIR-LLIDH-------------------------DPNKRPGARTL 281

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 46.9 bits (112), Expect = 6e-07
 Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
           N+L+ +N VA ++DFG+++   G++  + +T     + +MA  E       +TN DV+S+
Sbjct: 172 NILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRWMAI-ESLNYSVYTTNSDVWSY 227

Query: 63  GIMLMEAFT 71
           G++L E  +
Sbjct: 228 GVLLWEIVS 236

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 46.6 bits (111), Expect = 7e-07
 Identities = 30/155 (19%), Positives = 51/155 (32%), Gaps = 33/155 (21%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIG----------YMAPVEYGRE 50
           PSN+    + V  + DFG+   +  +++  T    +              YM+P E    
Sbjct: 146 PSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSP-EQIHG 204

Query: 51  GRVSTNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTRE 110
              S   D++S G++L E           FS +M   R + D+               R 
Sbjct: 205 NSYSHKVDIFSLGLILFELLYP-------FSTQMERVRTLTDV---------------RN 242

Query: 111 DRHFAAKQQCVSFVFNLAMECTIESPERRINAKEI 145
            +      Q     + +  +    SP  R  A  I
Sbjct: 243 LKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINI 277

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 45.4 bits (108), Expect = 2e-06
 Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 8/79 (10%)

Query: 1   PSNVLLDD-NMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP--VEYGREGRVSTN 56
             NVL++  + V  +SDFG +K L G       T+T   T+ YMAP  ++ G  G     
Sbjct: 150 GDNVLINTYSGVLKISDFGTSKRLAG---INPCTETFTGTLQYMAPEIIDKGPRGY-GKA 205

Query: 57  GDVYSFGIMLMEAFTRKKP 75
            D++S G  ++E  T K P
Sbjct: 206 ADIWSLGCTIIEMATGKPP 224

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 45.2 bits (107), Expect = 3e-06
 Identities = 26/125 (20%), Positives = 45/125 (36%), Gaps = 26/125 (20%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP-----VEYGREGRVS 54
           P N+LLDD+    +SD G+A  +          +    T+GYMAP       Y       
Sbjct: 314 PENILLDDHGHIRISDLGLAVHVPEGQT----IKGRVGTVGYMAPEVVKNERYTFS--P- 366

Query: 55  TNGDVYSFGIMLME---------AFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDAN 105
              D ++ G +L E            +K   +E+      +    ++  S     +    
Sbjct: 367 ---DWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQ- 422

Query: 106 LLTRE 110
           LL ++
Sbjct: 423 LLCKD 427

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 44.5 bits (106), Expect = 3e-06
 Identities = 24/129 (18%), Positives = 45/129 (34%), Gaps = 35/129 (27%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL-ATIGYMAP-----VEYGREGRVS 54
           P N+LL+++M   ++DFG AK+L  E +      +   T  Y++P         +     
Sbjct: 158 PENILLNEDMHIQITDFGTAKVLSPESKQAR-ANSFVGTAQYVSPELLTEKSACKS---- 212

Query: 55  TNGDVYSFGIMLMEAFTRKKP-----TDEMF----SGEMTLKRWIN----DLLSVSVMEV 101
              D+++ G ++ +      P        +F      E            DL+       
Sbjct: 213 --SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVE------ 264

Query: 102 VDANLLTRE 110
               LL  +
Sbjct: 265 ---KLLVLD 270

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 44.4 bits (105), Expect = 5e-06
 Identities = 29/167 (17%), Positives = 51/167 (30%), Gaps = 35/167 (20%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA----------TIGYMAP--VEYG 48
             N+LL +     L DFG A  +          Q  A          T  Y  P  ++  
Sbjct: 166 VENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLY 225

Query: 49  REGRVSTNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLT 108
               +    D+++ G +L     R+ P    F     L+             +V+     
Sbjct: 226 SNFPIGEKQDIWALGCILYLLCFRQHP----FEDGAKLR-------------IVNGKYSI 268

Query: 109 REDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDS 155
                            +L       +PE R++  E+V +L +I  +
Sbjct: 269 PPHDTQYTVFH------SLIRAMLQVNPEERLSIAEVVHQLQEIAAA 309

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 43.5 bits (103), Expect = 7e-06
 Identities = 31/162 (19%), Positives = 53/162 (32%), Gaps = 27/162 (16%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-------TIGYMAP--VEYGREG 51
           P+N+LL D     L D G         +   Q  TL        TI Y AP         
Sbjct: 162 PTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHC 221

Query: 52  RVSTNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTRED 111
            +    DV+S G +L      + P D +F    ++   + + LS+       + L     
Sbjct: 222 VIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALW---- 277

Query: 112 RHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIR 153
                          L        P +R +   ++++L  ++
Sbjct: 278 --------------QLLNSMMTVDPHQRPHIPLLLSQLEALQ 305

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 43.0 bits (102), Expect = 1e-05
 Identities = 28/164 (17%), Positives = 55/164 (33%), Gaps = 41/164 (25%)

Query: 3   NVLLD--------DNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP--VEYGREGR 52
           N+LL         +     LSD GI+  +    + + Q      I ++ P  +E  +   
Sbjct: 143 NILLIREEDRKTGNPPFIKLSDPGISITV--LPKDILQ----ERIPWVPPECIENPK--N 194

Query: 53  VSTNGDVYSFGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTRED 111
           ++   D +SFG  L E  +   KP   + S                 ++          +
Sbjct: 195 LNLATDKWSFGTTLWEICSGGDKPLSALDSQR--------------KLQFY--------E 232

Query: 112 RHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDS 155
                     + + NL   C    P+ R + + I+ +L+ +   
Sbjct: 233 DRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP 276

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 41.9 bits (99), Expect = 3e-05
 Identities = 30/134 (22%), Positives = 50/134 (37%), Gaps = 40/134 (29%)

Query: 1   PSNVLLDDNMVAH--LSDFGIAKLLIGEDQSMTQTQTLATIGYMAP-----VEYGREGRV 53
             N+LLD N   H  L+DFG++K  + ++          TI YMAP      + G +  V
Sbjct: 187 LENILLDSN--GHVVLTDFGLSKEFVADETERAYD-FCGTIEYMAPDIVRGGDSGHDKAV 243

Query: 54  STNGDVYSFGIMLME---------AFTRKKPTDEMF----SGEMTLKRWIN----DLLSV 96
               D +S G+++ E             K    E+       E    + ++    DL+  
Sbjct: 244 ----DWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQ- 298

Query: 97  SVMEVVDANLLTRE 110
                    LL ++
Sbjct: 299 --------RLLMKD 304

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 41.5 bits (97), Expect = 5e-05
 Identities = 30/125 (24%), Positives = 51/125 (40%), Gaps = 29/125 (23%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP-----VEYGREGRVS 54
             NV+LD      ++DFG+ K  I +      T+T   T  Y+AP       YG+   V 
Sbjct: 470 LDNVMLDSEGHIKIADFGMCKENIWDGV---TTKTFCGTPDYIAPEIIAYQPYGKS--V- 523

Query: 55  TNGDVYSFGIMLMEAFTRKKP-----TDEMF----SGEMTLKRWINDLLSVSVMEVVDAN 105
              D ++FG++L E    + P      DE+F       +   +     +S   + +    
Sbjct: 524 ---DWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS----MSKEAVAICKG- 575

Query: 106 LLTRE 110
           L+T+ 
Sbjct: 576 LMTKH 580

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 41.1 bits (97), Expect = 6e-05
 Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 20/77 (25%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP-----------VEYGR 49
           P N+LLDD+M   L+DFG +   +   + +   +   T  Y+AP             YG+
Sbjct: 152 PENILLDDDMNIKLTDFGFSC-QLDPGEKL--REVCGTPSYLAPEIIECSMNDNHPGYGK 208

Query: 50  EGRVSTNGDVYSFGIML 66
           E       D++S G+++
Sbjct: 209 E------VDMWSTGVIM 219

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 41.0 bits (97), Expect = 6e-05
 Identities = 15/74 (20%), Positives = 28/74 (37%), Gaps = 17/74 (22%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL-ATIGYMAP-----VEYGREGRVS 54
           P N+LL       ++DFG +           +   L  T+ Y+ P       +  +    
Sbjct: 137 PENLLLGSAGELKIADFGWSVHAPSS-----RRTDLCGTLDYLPPEMIEGRMHDEK---- 187

Query: 55  TNGDVYSFGIMLME 68
              D++S G++  E
Sbjct: 188 --VDLWSLGVLCYE 199

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 40.9 bits (96), Expect = 7e-05
 Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 22/78 (28%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP-----------VEYG 48
           P N+LLDDNM   LSDFG +   +   + +     L  T GY+AP             YG
Sbjct: 228 PENILLDDNMQIRLSDFGFSC-HLEPGEKLR---ELCGTPGYLAPEILKCSMDETHPGYG 283

Query: 49  REGRVSTNGDVYSFGIML 66
           +E       D+++ G++L
Sbjct: 284 KE------VDLWACGVIL 295

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 40.9 bits (96), Expect = 8e-05
 Identities = 22/90 (24%), Positives = 33/90 (36%), Gaps = 7/90 (7%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP-VEYGREGRVSTNGD 58
           PSN+L+D N    LSDFG ++ ++ +       +    T  +M P              D
Sbjct: 180 PSNILMDKNGRVKLSDFGESEYMVDKK-----IKGSRGTYEFMPPEFFSNESSYNGAKVD 234

Query: 59  VYSFGIMLMEAFTRKKPTDEMFSGEMTLKR 88
           ++S GI L   F    P     S       
Sbjct: 235 IWSLGICLYVMFYNVVPFSLKISLVELFNN 264

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 40.0 bits (94), Expect = 1e-04
 Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 9/69 (13%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIG---YMAPVEYGREGRVSTNGDV 59
           NVLL ++    L+DFG+A  L     +  +  T   +G   +MAP E  ++    +  D+
Sbjct: 149 NVLLSEHGEVKLADFGVAGQL---TDTQIKRNTF--VGTPFWMAP-EVIKQSAYDSKADI 202

Query: 60  YSFGIMLME 68
           +S GI  +E
Sbjct: 203 WSLGITAIE 211

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 39.9 bits (94), Expect = 1e-04
 Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 6/69 (8%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNG--- 57
           PSN+L+ ++    ++DFG++    G D ++    T+ T  +MAP E   E R   +G   
Sbjct: 165 PSNLLVGEDGHIKIADFGVSNEFKGSD-ALLSN-TVGTPAFMAP-ESLSETRKIFSGKAL 221

Query: 58  DVYSFGIML 66
           DV++ G+ L
Sbjct: 222 DVWAMGVTL 230

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 39.8 bits (94), Expect = 2e-04
 Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 28/107 (26%)

Query: 1   PSNVLLDDNMVAH--LSDFGIAKLLIGEDQSMTQTQTL-ATIGYMAP-----VEYGREGR 52
           P N+LLD+    H  L+DFG++K  I  ++      +   T+ YMAP       + +   
Sbjct: 154 PENILLDEE--GHIKLTDFGLSKESIDHEKK---AYSFCGTVEYMAPEVVNRRGHTQS-- 206

Query: 53  VSTNGDVYSFGIMLMEAFTRKKP-----TDEMF----SGEMTLKRWI 90
                D +SFG+++ E  T   P       E        ++ + +++
Sbjct: 207 A----DWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFL 249

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 39.7 bits (93), Expect = 2e-04
 Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 14/92 (15%)

Query: 1   PSNVLLDDNMVAH--LSDFGIAKLLIGEDQSMTQTQTLATIGYMAP-VEYGREGRVSTNG 57
           P N+L+D N   H  L+DFG    L+ +    +    + T  Y++P +    EG     G
Sbjct: 203 PDNILMDMN--GHIRLADFGSCLKLMEDGTVQSSV-AVGTPDYISPEILQAMEGGKGRYG 259

Query: 58  ---DVYSFGIMLMEAFTRKKP-----TDEMFS 81
              D +S G+ + E    + P       E + 
Sbjct: 260 PECDWWSLGVCMYEMLYGETPFYAESLVETYG 291

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 39.3 bits (92), Expect = 2e-04
 Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 9/69 (13%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIG---YMAPVEYGREGRVSTNGDV 59
           N+LL+    A L+DFG+A  L     +M +  T+  IG   +MAP E  +E   +   D+
Sbjct: 155 NILLNTEGHAKLADFGVAGQL---TDTMAKRNTV--IGTPFWMAP-EVIQEIGYNCVADI 208

Query: 60  YSFGIMLME 68
           +S GI  +E
Sbjct: 209 WSLGITAIE 217

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 39.4 bits (92), Expect = 2e-04
 Identities = 19/87 (21%), Positives = 33/87 (37%), Gaps = 21/87 (24%)

Query: 1   PSNVLLD-------------DNMVAHLSDFGIAKLLIGEDQSMTQTQTLA--TIGYMAP- 44
           P N+L+              +N+   +SDFG+ K L     S          T G+ AP 
Sbjct: 143 PQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPE 202

Query: 45  -----VEYGREGRVSTNGDVYSFGIML 66
                     + R++ + D++S G + 
Sbjct: 203 LLEESNNLQTKRRLTRSIDIFSMGCVF 229

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 39.2 bits (92), Expect = 2e-04
 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 5/67 (7%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVYS 61
           N+LL  +    L+DFG    +       ++  T+  T  +MAP E           D++S
Sbjct: 146 NILLGMDGSVKLTDFGFCAQI---TPEQSKRSTMVGTPYWMAP-EVVTRKAYGPKVDIWS 201

Query: 62  FGIMLME 68
            GIM +E
Sbjct: 202 LGIMAIE 208

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 39.3 bits (92), Expect = 2e-04
 Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 9/69 (13%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIG---YMAPVEYGREGRVSTNGDV 59
           ++LL  +    LSDFG    +    + + + ++L  +G   +MAP E       +T  D+
Sbjct: 171 SILLTLDGRVKLSDFGFCAQI---SKDVPKRKSL--VGTPYWMAP-EVISRSLYATEVDI 224

Query: 60  YSFGIMLME 68
           +S GIM++E
Sbjct: 225 WSLGIMVIE 233

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 39.1 bits (92), Expect = 3e-04
 Identities = 26/107 (24%), Positives = 42/107 (39%), Gaps = 28/107 (26%)

Query: 1   PSNVLLDDNMVAH--LSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP-----VEYGREGR 52
           P N++L+     H  L+DFG+ K  I +      T T   TI YMAP       + R   
Sbjct: 149 PENIMLNHQ--GHVKLTDFGLCKESIHDGTV---THTFCGTIEYMAPEILMRSGHNRA-- 201

Query: 53  VSTNGDVYSFGIMLMEAFTRKKP-----TDEMF----SGEMTLKRWI 90
           V    D +S G ++ +  T   P       +        ++ L  ++
Sbjct: 202 V----DWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYL 244

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 39.3 bits (92), Expect = 3e-04
 Identities = 27/125 (21%), Positives = 51/125 (40%), Gaps = 29/125 (23%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL-ATIGYMAP-----VEYGREGRVS 54
             N++LD +    ++DFG+ K  I +  +    +T   T  Y+AP      +YGR   V 
Sbjct: 277 LENLMLDKDGHIKITDFGLCKEGIKDGAT---MKTFCGTPEYLAPEVLEDNDYGRA--V- 330

Query: 55  TNGDVYSFGIMLMEAFTRKKP-----TDEMF----SGEMTLKRWINDLLSVSVMEVVDAN 105
              D +  G+++ E    + P      +++F      E+   R     L      ++   
Sbjct: 331 ---DWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT----LGPEAKSLLSG- 382

Query: 106 LLTRE 110
           LL ++
Sbjct: 383 LLKKD 387

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 38.8 bits (91), Expect = 3e-04
 Identities = 34/127 (26%), Positives = 52/127 (40%), Gaps = 33/127 (25%)

Query: 1   PSNVLLDDNMVAH--LSDFGIAKLLIGEDQSMTQTQTL-ATIGYMAP-----VEYGREGR 52
           P N+LLD     H  L+DFG+ K  I  + +   T T   T  Y+AP       Y R   
Sbjct: 167 PENILLDSQ--GHIVLTDFGLCKENIEHNST---TSTFCGTPEYLAPEVLHKQPYDRT-- 219

Query: 53  VSTNGDVYSFGIMLMEAFTRKKP-----TDEMF----SGEMTLKRWINDLLSVSVMEVVD 103
           V    D +  G +L E      P     T EM+    +  + LK      ++ S   +++
Sbjct: 220 V----DWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPN----ITNSARHLLE 271

Query: 104 ANLLTRE 110
             LL ++
Sbjct: 272 G-LLQKD 277

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 38.8 bits (91), Expect = 3e-04
 Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 12/73 (16%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIG---YMAP----VEYGREGRVST 55
           NVL+       L+DFG++       +++ +  +   IG   +MAP     E  ++     
Sbjct: 147 NVLMTLEGDIRLADFGVSAKN---LKTLQKRDSF--IGTPYWMAPEVVMCETMKDTPYDY 201

Query: 56  NGDVYSFGIMLME 68
             D++S GI L+E
Sbjct: 202 KADIWSLGITLIE 214

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 38.7 bits (90), Expect = 3e-04
 Identities = 15/74 (20%), Positives = 32/74 (43%), Gaps = 8/74 (10%)

Query: 2   SNVLLDDNMVAHLSDFGIAKLLI--GEDQSMTQTQTLATIG---YMAPVEYGREGRVSTN 56
           S++L+  +   +LS       +I  G+ Q +       ++    +++P E  ++     +
Sbjct: 157 SHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSP-EVLQQNLQGYD 215

Query: 57  G--DVYSFGIMLME 68
              D+YS GI   E
Sbjct: 216 AKSDIYSVGITACE 229

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 38.7 bits (91), Expect = 4e-04
 Identities = 32/127 (25%), Positives = 49/127 (38%), Gaps = 33/127 (25%)

Query: 1   PSNVLLDDNMVAH--LSDFGIAKLLIGEDQSMTQTQTL-ATIGYMAP-----VEYGREGR 52
             N+LLD +   H  ++DFG+ K  +  D     T T   T  Y+AP      +Y     
Sbjct: 146 LDNILLDKD--GHIKIADFGMCKENMLGDAK---TNTFCGTPDYIAPEILLGQKYNHS-- 198

Query: 53  VSTNGDVYSFGIMLMEAFTRKKP-----TDEMF----SGEMTLKRWINDLLSVSVMEVVD 103
                D +SFG++L E    + P      +E+F           RW    L     +++ 
Sbjct: 199 ----VDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRW----LEKEAKDLLV 250

Query: 104 ANLLTRE 110
             L  RE
Sbjct: 251 K-LFVRE 256

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 38.5 bits (90), Expect = 4e-04
 Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 10/96 (10%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           PSN+++  +    + DFG+A+       S   T  + T  Y AP E         N D++
Sbjct: 155 PSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP-EVILGMGYKENVDIW 210

Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRW--INDLL 94
           S G ++ E          +F G   + +W  + + L
Sbjct: 211 SVGCIMGEMIKGGV----LFPGTDHIDQWNKVIEQL 242

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 38.8 bits (91), Expect = 4e-04
 Identities = 31/125 (24%), Positives = 49/125 (39%), Gaps = 29/125 (23%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL-ATIGYMAP-----VEYGREGRVS 54
             NVLLD      L+DFG+ K  I    +   T T   T  Y+AP     + YG    V 
Sbjct: 152 LDNVLLDHEGHCKLADFGMCKEGICNGVT---TATFCGTPDYIAPEILQEMLYGPA--V- 205

Query: 55  TNGDVYSFGIMLMEAFTRKKP-----TDEMF----SGEMTLKRWINDLLSVSVMEVVDAN 105
              D ++ G++L E      P      D++F    + E+    W    L      ++ + 
Sbjct: 206 ---DWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTW----LHEDATGILKS- 257

Query: 106 LLTRE 110
            +T+ 
Sbjct: 258 FMTKN 262

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 38.4 bits (90), Expect = 5e-04
 Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 16/74 (21%)

Query: 1   PSNVLL---DDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP-----VEYGREGR 52
           P  VLL   +++    L  FG+A  L            + T  +MAP       YG+   
Sbjct: 158 PHCVLLASKENSAPVKLGGFGVAIQLGESGLVA--GGRVGTPHFMAPEVVKREPYGKP-- 213

Query: 53  VSTNGDVYSFGIML 66
                DV+  G++L
Sbjct: 214 ----VDVWGCGVIL 223

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 38.3 bits (89), Expect = 5e-04
 Identities = 31/180 (17%), Positives = 57/180 (31%), Gaps = 40/180 (22%)

Query: 1   PSNVLL----DDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTN 56
           P N++     D   V  L+DFG A+ L  ED     +    T  Y+ P  Y R      +
Sbjct: 140 PGNIMRVIGEDGQSVYKLTDFGAAREL--EDDEQFVSL-YGTEEYLHPDMYERAVLRKDH 196

Query: 57  G-------DVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTR 109
                   D++S G+    A T   P    F      +R    +  +   +   A    +
Sbjct: 197 QKKYGATVDLWSIGVTFYHAATGSLP----FRPFEGPRRNKEVMYKIITGKPSGAISGVQ 252

Query: 110 EDRHFAAKQQCVSFVFNLAMECTIES-----------------PERRINAKEIVTELSKI 152
           +  +       + +  ++ + C++                    E+     +   E S I
Sbjct: 253 KAENGP-----IDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 38.2 bits (89), Expect = 5e-04
 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 14/71 (19%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIG---YMAP--VEYGREGRVSTNG 57
           N+LL +  +  L DFG A         M    +   +G   +MAP  +    EG+     
Sbjct: 184 NILLSEPGLVKLGDFGSA-------SIMAPANSF--VGTPYWMAPEVILAMDEGQYDGKV 234

Query: 58  DVYSFGIMLME 68
           DV+S GI  +E
Sbjct: 235 DVWSLGITCIE 245

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 38.4 bits (90), Expect = 5e-04
 Identities = 30/125 (24%), Positives = 51/125 (40%), Gaps = 29/125 (23%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL-ATIGYMAP-----VEYGREGRVS 54
             NV+LD      ++DFG+ K  I +      T+T   T  Y+AP       YG+   V 
Sbjct: 149 LDNVMLDSEGHIKIADFGMCKENIWDGV---TTKTFCGTPDYIAPEIIAYQPYGKS--V- 202

Query: 55  TNGDVYSFGIMLMEAFTRKKP-----TDEMF----SGEMTLKRWINDLLSVSVMEVVDAN 105
              D ++FG++L E    + P      DE+F       +   +     +S   + +    
Sbjct: 203 ---DWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS----MSKEAVAICKG- 254

Query: 106 LLTRE 110
           L+T+ 
Sbjct: 255 LMTKH 259

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 38.5 bits (89), Expect = 6e-04
 Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 17/83 (20%)

Query: 1   PSNVLLD---DNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP-----VEYGREGR 52
           P N++L      ++  + D G AK L  +   +     + T+ Y+AP      +Y     
Sbjct: 149 PENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEF-VGTLQYLAPELLEQKKYTVT-- 203

Query: 53  VSTNGDVYSFGIMLMEAFTRKKP 75
                D +SFG +  E  T  +P
Sbjct: 204 ----VDYWSFGTLAFECITGFRP 222

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 38.0 bits (89), Expect = 7e-04
 Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 20/91 (21%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL-ATIGYMAP-----VEYGREGRVS 54
             N++LD +    ++DFG+ K  I +  +    +T   T  Y+AP      +YGR   V 
Sbjct: 133 LENLMLDKDGHIKITDFGLCKEGISDGAT---MKTFCGTPEYLAPEVLEDNDYGRA--V- 186

Query: 55  TNGDVYSFGIMLMEAFTRKKP-----TDEMF 80
              D +  G+++ E    + P      + +F
Sbjct: 187 ---DWWGLGVVMYEMMCGRLPFYNQDHERLF 214

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 37.8 bits (88), Expect = 7e-04
 Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 20/79 (25%)

Query: 1   PSNVLLDDNMVAH--LSDFGIAKLLIGEDQSMTQTQTLATIGYMAP---------VEYGR 49
           P N+LLD +   H  L+DFG    +  E      T  + T  Y++P           YGR
Sbjct: 196 PDNMLLDKS--GHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISPEVLKSQGGDGYYGR 252

Query: 50  EGRVSTNGDVYSFGIMLME 68
           E       D +S G+ L E
Sbjct: 253 E--C----DWWSVGVFLYE 265

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 37.7 bits (88), Expect = 7e-04
 Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 12/73 (16%)

Query: 3   NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIG---YMAP----VEYGREGRVST 55
           NVLL +N    L DFG++  L   D+++ +  T   IG   +MAP     +   +     
Sbjct: 159 NVLLTENAEVKLVDFGVSAQL---DRTVGRRNTF--IGTPYWMAPEVIACDENPDATYDF 213

Query: 56  NGDVYSFGIMLME 68
             D++S GI  +E
Sbjct: 214 KSDLWSLGITAIE 226

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	164
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.97
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.97
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.97
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.97
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.97
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.96
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.96
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.96
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.96
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.96
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.96
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.96
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.95
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.94
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.94
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.94
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.94
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.93
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.93
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.92
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.92
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.92
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.92
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.92
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.92
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.92
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.92
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.92
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.92
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.92
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.92
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.92
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.92
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.91
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.91
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.91
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.91
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.91
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.91
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.91
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.91
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.91
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.91
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.91
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.91
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.91
3niz_A	311	Rhodanese family protein; structural genomics, str	99.91
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.91
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.91
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.91
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.91
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.91
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.91
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.91
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.91
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.91
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.91
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.91
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.91
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.91
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.91
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.9
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.9
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.9
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.9
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.9
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.9
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.9
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.9
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.9
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.9
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.9
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.9
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.9
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.9
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.9
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.9
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.9
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.9
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.9
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.9
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.9
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.9
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.9
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.9
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.9
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.9
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.9
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.9
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.9
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.9
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.9
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.9
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.9
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.9
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.9
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.9
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.9
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.9
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.9
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.9
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.9
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.9
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.9
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.9
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.9
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.9
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.9
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.9
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.89
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.89
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.89
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.89
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.89
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.89
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.89
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.89
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.89
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.89
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.89
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.89
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.89
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.89
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.89
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.89
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.89
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.89
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.89
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.89
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.89
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.89
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.89
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.89
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.89
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.89
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.89
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.89
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.89
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.89
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.89
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.89
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.89
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.89
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.89
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.89
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.89
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.89
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.89
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.88
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.88
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.88
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.88
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.88
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.88
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.88
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.88
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.88
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.88
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.88
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.88
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.88
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.88
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.88
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.88
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.88
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.88
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.88
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.88
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.88
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.88
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.88
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.88
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.88
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.88
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.88
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.88
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.88
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.88
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.88
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.88
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.88
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.88
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.88
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.88
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.88
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.88
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.87
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.87
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.87
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.87
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.87
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.87
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.87
3bhy_A	283	Death-associated protein kinase 3; death associate	99.87
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.87
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.87
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.87
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.87
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.87
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.87
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.87
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.87
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.87
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.87
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.87
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.87
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.87
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.87
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.87
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.87
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.87
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.87
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.87
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.87
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.86
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.86
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.86
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.86
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.86
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.86
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.86
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.86
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.86
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.86
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.86
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.86
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.86
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.86
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.86
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.86
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.86
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.86
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.86
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.86
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.86
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.86
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.86
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.85
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.85
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.85
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.85
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.85
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.85
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.83
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.78
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.77
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.76
3uqc_A	286	Probable conserved transmembrane protein; structur	99.68
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.63
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.17
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	98.29
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	96.39
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	95.03
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	92.17
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	85.71
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	83.5

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=2.9e-33  Score=191.75  Aligned_cols=142  Identities=22%  Similarity=0.326  Sum_probs=98.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhc--cCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGR--EGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~--~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+||||+.++.+||+|||+|+...............||+.|+|||.+..  ...++.++|||||||++|||++|..||..
T Consensus       160 p~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~  239 (307)
T 3omv_A          160 SNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSH  239 (307)
T ss_dssp             SSSEEEETTEEEEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             HHHEEECCCCcEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCC
Confidence            7899999999999999999987532222223345679999999966643  33588899999999999999999999975


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhh
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLF  157 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~  157 (164)
                      ...... ..            ..+.....  .+.....+..++..+.+++.+||+.||++|||+.+|++.|+.+++.+.
T Consensus       240 ~~~~~~-~~------------~~~~~~~~--~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lp  303 (307)
T 3omv_A          240 INNRDQ-II------------FMVGRGYA--SPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP  303 (307)
T ss_dssp             CCCHHH-HH------------HHHHTTCC--CCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred             CChHHH-HH------------HHHhcCCC--CCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCC
Confidence            322111 11            11111111  011112234567779999999999999999999999999999887664

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.97  E-value=2.9e-32  Score=190.27  Aligned_cols=135  Identities=21%  Similarity=0.380  Sum_probs=101.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+|||++.++.+||+|||+|+.+.............||+.|+|||.+ ....++.++|||||||++|||++ |..||...
T Consensus       213 ~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l-~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~  291 (353)
T 4ase_A          213 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI-FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV  291 (353)
T ss_dssp             GGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred             ccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHH-hcCCCCCcccEeehHHHHHHHHhCCCCCCCCC
Confidence            68999999999999999999876433333344456789999999544 56678999999999999999998 89999764


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDS  155 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~  155 (164)
                      ..... +.            ..+....      ....|..+++++.+++.+||+.||++|||++++++.|..+.+.
T Consensus       292 ~~~~~-~~------------~~i~~g~------~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~  348 (353)
T 4ase_A          292 KIDEE-FC------------RRLKEGT------RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  348 (353)
T ss_dssp             CCSHH-HH------------HHHHHTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CHHHH-HH------------HHHHcCC------CCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence            33221 11            1111111      1122345567799999999999999999999999999888653

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.97  E-value=3.1e-32  Score=188.65  Aligned_cols=134  Identities=23%  Similarity=0.427  Sum_probs=92.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||||+.++.+||+|||+++.+.............||+.|+||| +.....++.++|||||||++|||++ |+.||...
T Consensus       186 p~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE-~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~  264 (329)
T 4aoj_A          186 TRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPE-SILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL  264 (329)
T ss_dssp             GGGEEEETTTEEEECCCC----------------CCCCGGGCCHH-HHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSS
T ss_pred             HhhEEECCCCcEEEcccccceeccCCCcceecCcccccccccChh-hhcCCCCCccccccchHHHHHHHHcCCCCCCCCC
Confidence            689999999999999999998764333333344567899999995 5556678999999999999999998 89999754


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDS  155 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~  155 (164)
                      ....  ..            ..+....      ....|..+++.+.+++.+||+.||++|||+++|++.|+.+.+.
T Consensus       265 ~~~~--~~------------~~i~~g~------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~  320 (329)
T 4aoj_A          265 SNTE--AI------------DCITQGR------ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA  320 (329)
T ss_dssp             CHHH--HH------------HHHHHTC------CCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             CHHH--HH------------HHHHcCC------CCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence            2211  11            1111111      1122345677799999999999999999999999999998764

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.97  E-value=1.8e-32  Score=188.22  Aligned_cols=131  Identities=27%  Similarity=0.447  Sum_probs=98.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||||+.++.+||+|||+++.+.............||+.|+|||. .....++.++|||||||++||+++ |..||...
T Consensus       173 ~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~-l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~  251 (308)
T 4gt4_A          173 TRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEA-IMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY  251 (308)
T ss_dssp             GGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHH-HHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTC
T ss_pred             ccceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHH-HhCCCCCccchhhhHHHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999987643333333445678999999954 456678999999999999999998 89999754


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI  152 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~  152 (164)
                      ...  ...            ..+....      ..+.+..++..+.+++.+||+.||++|||+++|++.|+.+
T Consensus       252 ~~~--~~~------------~~i~~~~------~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~  304 (308)
T 4gt4_A          252 SNQ--DVV------------EMIRNRQ------VLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW  304 (308)
T ss_dssp             CHH--HHH------------HHHHTTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             CHH--HHH------------HHHHcCC------CCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            221  111            1111111      1122445677799999999999999999999999988753

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.97  E-value=1.6e-32  Score=187.88  Aligned_cols=134  Identities=26%  Similarity=0.435  Sum_probs=100.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+|||++.++.+||+|||+|+...............||+.|+||| +.....++.++|||||||++|||++ |+.||...
T Consensus       156 p~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE-~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~  234 (299)
T 4asz_A          156 TRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPE-SIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQL  234 (299)
T ss_dssp             GGGEEECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHH-HHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred             HhhEEECCCCcEEECCcccceecCCCCceeecCceecChhhcCHH-HHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCC
Confidence            689999999999999999998763333332333456899999995 4456678999999999999999998 89999754


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDS  155 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~  155 (164)
                      ...+  ..            ..+....      ....|..+++++.+++.+||+.||++|||+++|++.|+++.+.
T Consensus       235 ~~~~--~~------------~~i~~~~------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~  290 (299)
T 4asz_A          235 SNNE--VI------------ECITQGR------VLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA  290 (299)
T ss_dssp             CHHH--HH------------HHHHHTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CHHH--HH------------HHHHcCC------CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence            2211  11            1111111      1112345677799999999999999999999999999988764

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.97  E-value=2e-31  Score=183.10  Aligned_cols=155  Identities=17%  Similarity=0.196  Sum_probs=95.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc--cccccccccccccCchhhhccC-----cccCccchHhHHHHHHHHHhcC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS--MTQTQTLATIGYMAPVEYGREG-----RVSTNGDVYSFGIMLMEAFTRK   73 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~-----~~~~~~Di~s~g~~~~~~~~g~   73 (164)
                      |+||||+.++.+||+|||+++........  .......||+.|+|||.+....     .++.++|||||||++|||++|.
T Consensus       136 p~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~  215 (303)
T 3hmm_A          136 SKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRC  215 (303)
T ss_dssp             GGGEEECTTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTB
T ss_pred             cccEEECCCCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCC
Confidence            78999999999999999999876432222  1223457999999996654321     3667899999999999999998


Q ss_pred             CCCCccccCchhHHHHHHHh-hhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHH
Q 039452           74 KPTDEMFSGEMTLKRWINDL-LSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI  152 (164)
Q Consensus        74 ~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~  152 (164)
                      .|+.........+....... ........+.........+.......++..+.+++.+||+.||++|||+.+|++.|+++
T Consensus       216 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l  295 (303)
T 3hmm_A          216 SIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL  295 (303)
T ss_dssp             CBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHH
Confidence            77643221111100000000 00001111111111111111112234566788999999999999999999999999998


Q ss_pred             HHH
Q 039452          153 RDS  155 (164)
Q Consensus       153 ~~~  155 (164)
                      .++
T Consensus       296 ~~~  298 (303)
T 3hmm_A          296 SQQ  298 (303)
T ss_dssp             HHC
T ss_pred             HHH
Confidence            765

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.96  E-value=3.3e-30  Score=178.33  Aligned_cols=138  Identities=22%  Similarity=0.250  Sum_probs=99.1

Q ss_pred             CcceEecCCc-eEEEeccccceeccCCCCc---cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCC
Q 039452            1 PSNVLLDDNM-VAHLSDFGIAKLLIGEDQS---MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPT   76 (164)
Q Consensus         1 p~Nill~~~~-~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~   76 (164)
                      |+||||+.+| .+||+|||+|+.+......   .......||+.|+|||.+ .+..++.++||||+||++|+|++|..||
T Consensus       178 p~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~-~~~~y~~~~DiwSlGvilyemltG~~Pf  256 (336)
T 4g3f_A          178 ADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVV-MGKPCDAKVDIWSSCCMMLHMLNGCHPW  256 (336)
T ss_dssp             GGGEEECTTSCCEEECCCTTCEEC------------CCCCCCGGGCCHHHH-TTCCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             HHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHH-CCCCCCcHHHHHHHHHHHHHHHHCcCCC
Confidence            7899999887 6999999999876322111   112235699999999554 5567889999999999999999999999


Q ss_pred             CccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHh
Q 039452           77 DEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL  156 (164)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~  156 (164)
                      ...........             +...     .......++.+++.+.+++.+||+.||.+|||+.|+++.|....+.+
T Consensus       257 ~~~~~~~~~~~-------------i~~~-----~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~  318 (336)
T 4g3f_A          257 TQYFRGPLCLK-------------IASE-----PPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEV  318 (336)
T ss_dssp             TTTCCSCCHHH-------------HHHS-----CCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred             CCCCHHHHHHH-------------HHcC-----CCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhh
Confidence            75433322111             1110     11111234456777999999999999999999999999998887765


Q ss_pred             h
Q 039452          157 F  157 (164)
Q Consensus       157 ~  157 (164)
                      .
T Consensus       319 ~  319 (336)
T 4g3f_A          319 G  319 (336)
T ss_dssp             T
T ss_pred             h
Confidence            4

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.96  E-value=3e-30  Score=179.04  Aligned_cols=126  Identities=20%  Similarity=0.274  Sum_probs=93.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||||+.+|.+||+|||+|+.+..  ........+||+.|+||| ++....++.++||||+||++|+|++|..||....
T Consensus       198 p~NILl~~~g~vKl~DFGla~~~~~--~~~~~~~~~GTp~YmAPE-vl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~  274 (346)
T 4fih_A          198 SDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKSLVGTPYWMAPE-LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP  274 (346)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECCS--SSCCBCCCCSCGGGCCHH-HHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred             HHHEEECCCCCEEEecCcCceecCC--CCCcccccccCcCcCCHH-HHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC
Confidence            7899999999999999999987632  222334568999999995 5556678999999999999999999999997432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .  .....           .+.. ..    ......+..+++++.+|+.+||..||++|||++++++
T Consensus       275 ~--~~~~~-----------~i~~-~~----~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~  323 (346)
T 4fih_A          275 P--LKAMK-----------MIRD-NL----PPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  323 (346)
T ss_dssp             H--HHHHH-----------HHHH-SS----CCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             H--HHHHH-----------HHHc-CC----CCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            1  11110           0111 10    1111223455677999999999999999999999876

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.96  E-value=2.2e-30  Score=177.40  Aligned_cols=139  Identities=18%  Similarity=0.292  Sum_probs=98.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.+|.+||+|||+|+.+............+||+.|+|||. ..+..++.++|+||+||++|+|++|..||....
T Consensus       160 PeNILl~~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEv-l~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~  238 (311)
T 4aw0_A          160 PENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL-LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN  238 (311)
T ss_dssp             GGGEEECTTSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHH-HHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             HHHeEEcCCCCEEEEEcCCceecCCCCCcccccCcccCcccCCHHH-HcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            7899999999999999999988643333334455689999999955 456668899999999999999999999997421


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhhccC
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNV  160 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~~~~  160 (164)
                        .....           ..+.... .       ..+..+++++.+++.+||..||++|||+++++..-.-..+..|.++
T Consensus       239 --~~~~~-----------~~i~~~~-~-------~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~i  297 (311)
T 4aw0_A          239 --EGLIF-----------AKIIKLE-Y-------DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV  297 (311)
T ss_dssp             --HHHHH-----------HHHHHTC-C-------CCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred             --HHHHH-----------HHHHcCC-C-------CCCcccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCC
Confidence              11111           1111111 0       1123456678999999999999999999987544333344555554


Q ss_pred             C
Q 039452          161 G  161 (164)
Q Consensus       161 ~  161 (164)
                      +
T Consensus       298 d  298 (311)
T 4aw0_A          298 T  298 (311)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.96  E-value=6.4e-30  Score=172.75  Aligned_cols=123  Identities=22%  Similarity=0.341  Sum_probs=82.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||+|+....   ........||+.|+|||.+......+.++||||+||++|+|++|..||....
T Consensus       140 P~NILl~~~~~vkl~DFGla~~~~~---~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~  216 (275)
T 3hyh_A          140 PENLLLDEHLNVKIADFGLSNIMTD---GNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES  216 (275)
T ss_dssp             TTTEEECTTCCEEECCSSCC------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             hHHeEECCCCCEEEeecCCCeecCC---CCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC
Confidence            7999999999999999999987522   2223446799999999666544445688999999999999999999997421


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                        ....   ..        .+. ....       ..+..+++.+.+++.+||+.||++|||++++++
T Consensus       217 --~~~~---~~--------~i~-~~~~-------~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~  262 (275)
T 3hyh_A          217 --IPVL---FK--------NIS-NGVY-------TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             --HHHH---HH--------HHH-HTCC-------CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             --HHHH---HH--------HHH-cCCC-------CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence              1111   10        111 1111       112345667899999999999999999999987

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.96  E-value=2.4e-29  Score=171.21  Aligned_cols=123  Identities=20%  Similarity=0.337  Sum_probs=88.3

Q ss_pred             CcceEec-CCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLD-DNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~-~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+||||+ .+|.+||+|||+|+...    ........||+.|+|||.+ . ..++.++||||+||++|+|++|..||...
T Consensus       159 p~NILl~~~~g~vKl~DFGla~~~~----~~~~~~~~GTp~YmAPE~~-~-~~y~~~~DiwSlGvilyelltg~~Pf~~~  232 (290)
T 3fpq_A          159 CDNIFITGPTGSVKIGDLGLATLKR----ASFAKAVIGTPEFMAPEMY-E-EKYDESVDVYAFGMCMLEMATSEYPYSEC  232 (290)
T ss_dssp             GGGEEESSTTSCEEECCTTGGGGCC----TTSBEESCSSCCCCCGGGG-G-TCCCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             hhheeEECCCCCEEEEeCcCCEeCC----CCccCCcccCccccCHHHc-C-CCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence            7899997 47999999999997531    1223456799999999655 3 35889999999999999999999999643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ..... ..            ..+...     ..+...+..+++++.+++.+||+.||++|||++++++
T Consensus       233 ~~~~~-~~------------~~i~~~-----~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          233 QNAAQ-IY------------RRVTSG-----VKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             SSHHH-HH------------HHHTTT-----CCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CcHHH-HH------------HHHHcC-----CCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            21111 10            111111     1111122334566899999999999999999999876

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.96  E-value=1.9e-29  Score=178.94  Aligned_cols=126  Identities=20%  Similarity=0.274  Sum_probs=92.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||||+.+|.+||+|||+|+.+..  ........+||+.|+||| ++....++.++||||+||++|+|++|..||....
T Consensus       275 p~NILl~~~g~vKl~DFGla~~~~~--~~~~~~~~~GTp~YmAPE-vl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~  351 (423)
T 4fie_A          275 SDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKSLVGTPYWMAPE-LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP  351 (423)
T ss_dssp             TTTEEECTTCCEEECCCTTCEECCS--SCCCBCCCEECTTTCCHH-HHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred             HHHEEEcCCCCEEEecCccceECCC--CCccccccccCcCcCCHH-HHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC
Confidence            7899999999999999999987632  222334568999999995 5556678999999999999999999999997432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .  .....           .+.. ..    ......+..+++.+.+|+.+||..||++|||++++++
T Consensus       352 ~--~~~~~-----------~i~~-~~----~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~  400 (423)
T 4fie_A          352 P--LKAMK-----------MIRD-NL----PPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  400 (423)
T ss_dssp             H--HHHHH-----------HHHH-SC----CCCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             H--HHHHH-----------HHHc-CC----CCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            1  11111           0111 10    0111122345667999999999999999999999886

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.96  E-value=6.3e-30  Score=177.67  Aligned_cols=124  Identities=19%  Similarity=0.301  Sum_probs=91.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||||+.+|.+||+|||+|+.+.  .........+||+.|+|||. ..+..++.++||||+||++|+|++|..||....
T Consensus       153 p~NILl~~~g~vKl~DFGla~~~~--~~~~~~~~~~GT~~YmAPE~-l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~  229 (350)
T 4b9d_A          153 SQNIFLTKDGTVQLGDFGIARVLN--STVELARACIGTPYYLSPEI-CENKPYNNKSDIWALGCVLYELCTLKHAFEAGS  229 (350)
T ss_dssp             GGGEEECTTCCEEECSTTEESCCC--HHHHHHHHHHSCCTTCCHHH-HTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             HHHEEECCCCCEEEcccccceeec--CCcccccccCCCccccCHHH-HCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC
Confidence            789999999999999999998752  11112334579999999954 456668899999999999999999999997432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ...  .   .        ..+..... .      ..+..+++++.+|+.+||+.||++|||++++++
T Consensus       230 ~~~--~---~--------~~i~~~~~-~------~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          230 MKN--L---V--------LKIISGSF-P------PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE  276 (350)
T ss_dssp             HHH--H---H--------HHHHHTCC-C------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHH--H---H--------HHHHcCCC-C------CCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            111  1   1        11111110 0      112345667899999999999999999999986

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.95  E-value=5.6e-29  Score=170.23  Aligned_cols=123  Identities=25%  Similarity=0.330  Sum_probs=87.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.+|.+||+|||+|+....  .........||+.|+|||. .....++.++|+||+||++|+|++|..||....
T Consensus       154 p~NILl~~~g~vKl~DFGla~~~~~--~~~~~~~~~GT~~YmAPE~-~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~  230 (304)
T 3ubd_A          154 PENILLDEEGHIKLTDFGLSKESID--HEKKAYSFCGTVEYMAPEV-VNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD  230 (304)
T ss_dssp             GGGEEECTTSCEEEESSEEEEC-------CCCCSCCCCGGGCCHHH-HHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             HHHeEEcCCCCEEecccccceeccC--CCccccccccCcccCCHHH-hccCCCCCCCcccchHHHHHHHHhCCCCCCCcC
Confidence            7899999999999999999986522  1222345679999999954 456678899999999999999999999997432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCH-----HHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINA-----KEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~-----~~vl~  147 (164)
                      .  ....           ..+....        ...+..+++++.+++.+||+.||++|||+     +++++
T Consensus       231 ~--~~~~-----------~~i~~~~--------~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~  281 (304)
T 3ubd_A          231 R--KETM-----------TMILKAK--------LGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR  281 (304)
T ss_dssp             H--HHHH-----------HHHHHCC--------CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred             H--HHHH-----------HHHHcCC--------CCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence            1  1111           0111110        01123456779999999999999999985     56654

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.94  E-value=1.5e-27  Score=169.01  Aligned_cols=145  Identities=19%  Similarity=0.157  Sum_probs=94.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCC--CccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGED--QSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+|||++.+|.+||+|||+++.+....  ........+||+.|+|||.+.....++.++||||+||++|+|++|..||.+
T Consensus       186 P~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g  265 (398)
T 4b99_A          186 PSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPG  265 (398)
T ss_dssp             GGGEEECTTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred             ccccccCCCCCEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCC
Confidence            789999999999999999998763221  112234568999999997766666688999999999999999999999974


Q ss_pred             cccCchhHHHHHHHhhhhhhHH------------HhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVME------------VVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIV  146 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl  146 (164)
                      ..  .......+..........            .+..........-......+++.+.+|+.+||..||.+|||+++++
T Consensus       266 ~~--~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L  343 (398)
T 4b99_A          266 KN--YVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAAL  343 (398)
T ss_dssp             SS--HHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHT
T ss_pred             CC--HHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHh
Confidence            32  221111111111111000            0000000000000111223466789999999999999999999988


Q ss_pred             H
Q 039452          147 T  147 (164)
Q Consensus       147 ~  147 (164)
                      +
T Consensus       344 ~  344 (398)
T 4b99_A          344 R  344 (398)
T ss_dssp             T
T ss_pred             c
Confidence            6

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.94  E-value=4.5e-27  Score=164.84  Aligned_cols=147  Identities=18%  Similarity=0.189  Sum_probs=91.2

Q ss_pred             CcceEecCC-ceEEEeccccceeccCCCCc--------------------------cccccccccccccCchhhhccCcc
Q 039452            1 PSNVLLDDN-MVAHLSDFGIAKLLIGEDQS--------------------------MTQTQTLATIGYMAPVEYGREGRV   53 (164)
Q Consensus         1 p~Nill~~~-~~~kl~dfg~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~pe~~~~~~~~   53 (164)
                      |+|||++.+ +.+||+|||+|+........                          ......+||+.|+|||.+.....+
T Consensus       145 PeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y  224 (361)
T 4f9c_A          145 PSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQ  224 (361)
T ss_dssp             GGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCC
T ss_pred             HHHeEEeCCCCeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCC
Confidence            799999876 89999999999865321110                          012235799999999767665668


Q ss_pred             cCccchHhHHHHHHHHHhcCCCCCccccCchhHHHHHHHhhhhhhH----------------------HHhhhhcccc--
Q 039452           54 STNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVM----------------------EVVDANLLTR--  109 (164)
Q Consensus        54 ~~~~Di~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~--  109 (164)
                      +.++|+||+||++|+|++|..||.........+.............                      ..........  
T Consensus       225 ~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  304 (361)
T 4f9c_A          225 TTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSS  304 (361)
T ss_dssp             CTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC-----
T ss_pred             CCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhcccccc
Confidence            8999999999999999999999964333222222221111000000                      0000000000  


Q ss_pred             ----------cchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452          110 ----------EDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus       110 ----------~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                                ..........+++++.+|+.+||..||++|+|++++++
T Consensus       305 ~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~  352 (361)
T 4f9c_A          305 TPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALL  352 (361)
T ss_dssp             -----------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             ccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence                      00000111234567899999999999999999999886

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.94  E-value=7.4e-27  Score=161.78  Aligned_cols=155  Identities=22%  Similarity=0.266  Sum_probs=101.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhcc----CcccCccchHhHHHHHHHHHhcCCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGRE----GRVSTNGDVYSFGIMLMEAFTRKKPT   76 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~----~~~~~~~Di~s~g~~~~~~~~g~~p~   76 (164)
                      |+|||++.++.+||+|||+++.+.............|++.|+|||.+...    ..++.++||||+||++|++++|..||
T Consensus       159 p~Nill~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf  238 (322)
T 3soc_A          159 SKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAA  238 (322)
T ss_dssp             GGGEEECTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTS
T ss_pred             hHhEEECCCCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCC
Confidence            68999999999999999999876433332233345789999999666432    23556789999999999999999999


Q ss_pred             CccccCch-hHHHHHHHhh-hhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHH
Q 039452           77 DEMFSGEM-TLKRWINDLL-SVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRD  154 (164)
Q Consensus        77 ~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~  154 (164)
                      ........ .+........ .........................++..+.+++.+||+.||++|||++++++.|.++.+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~  318 (322)
T 3soc_A          239 DGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR  318 (322)
T ss_dssp             SSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            75432211 1111100000 001111111111111111111223456679999999999999999999999999999986


Q ss_pred             H
Q 039452          155 S  155 (164)
Q Consensus       155 ~  155 (164)
                      .
T Consensus       319 ~  319 (322)
T 3soc_A          319 L  319 (322)
T ss_dssp             H
T ss_pred             H
Confidence            5

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.94  E-value=6.7e-27  Score=160.16  Aligned_cols=124  Identities=23%  Similarity=0.329  Sum_probs=79.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc----------cccccccccccccCchhhhccCcccCccchHhHHHHHHHHH
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS----------MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAF   70 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~----------~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~   70 (164)
                      |+|||++.++.+||+|||+|+.+......          ...+..+||+.|+|||. ..+..++.++||||+||++|+|+
T Consensus       146 p~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~-~~~~~y~~~~DiwSlGvilyell  224 (299)
T 4g31_A          146 PSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQ-IHGNSYSHKVDIFSLGLILFELL  224 (299)
T ss_dssp             GGGEEECTTCCEEECCCCCC--------------------------CCCTTSCHHH-HTTCCCCTHHHHHHHHHHHHHHH
T ss_pred             HHHeEECCCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHH-HcCCCCCCHHHHHHHHHHHHHHc
Confidence            78999999999999999999876322111          11233579999999954 45667899999999999999999


Q ss_pred             hcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           71 TRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        71 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      +   ||...    ......+.        . +...   ..   .+......+.+.+++.+||+.||.+|||+.++++
T Consensus       225 ~---Pf~~~----~~~~~~~~--------~-~~~~---~~---p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  279 (299)
T 4g31_A          225 Y---PFSTQ----MERVRTLT--------D-VRNL---KF---PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE  279 (299)
T ss_dssp             S---CCSSH----HHHHHHHH--------H-HHTT---CC---CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             c---CCCCc----cHHHHHHH--------H-HhcC---CC---CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            5   66421    10000000        0 0000   00   1122333455778999999999999999999987

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.93  E-value=3.2e-26  Score=157.80  Aligned_cols=138  Identities=22%  Similarity=0.318  Sum_probs=88.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||+++...  ..........|++.|+|||.+ ....++.++||||+|+++|++++|..||....
T Consensus       167 p~NIll~~~~~~kL~Dfg~a~~~~--~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~elltg~~Pf~~~~  243 (309)
T 3p86_A          167 SPNLLVDKKYTVKVCDFGLSRLKA--STFLSSKSAAGTPEWMAPEVL-RDEPSNEKSDVYSFGVILWELATLQQPWGNLN  243 (309)
T ss_dssp             GGGEEECTTCCEEECCCC-------------------CCTTSCHHHH-TTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSC
T ss_pred             hhhEEEeCCCcEEECCCCCCcccc--ccccccccCCCCccccChhhh-cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            689999999999999999997642  222223345689999999554 45667889999999999999999999997432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhhccC
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNV  160 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~~~~  160 (164)
                      ....  ..           .....      ......+..+++.+.+++.+||+.||.+|||++++++.|+.+.+......
T Consensus       244 ~~~~--~~-----------~~~~~------~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p~~  304 (309)
T 3p86_A          244 PAQV--VA-----------AVGFK------CKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPP  304 (309)
T ss_dssp             HHHH--HH-----------HHHHS------CCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC------
T ss_pred             HHHH--HH-----------HHHhc------CCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCCCC
Confidence            1110  00           00000      01111223455668999999999999999999999999999987765543

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.92  E-value=8.5e-26  Score=166.67  Aligned_cols=126  Identities=16%  Similarity=0.164  Sum_probs=91.2

Q ss_pred             CcceEecC--CceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDD--NMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+|||++.  .+.+||+|||+++.+..   ........||+.|+||| ++.+..++.++||||+||++|+|++|..||.+
T Consensus       283 p~Nill~~~~~~~vKl~DFG~a~~~~~---~~~~~~~~GT~~y~APE-v~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~  358 (573)
T 3uto_A          283 PENIMFTTKRSNELKLIDFGLTAHLDP---KQSVKVTTGTAEFAAPE-VAEGKPVGYYTDMWSVGVLSYILLSGLSPFGG  358 (573)
T ss_dssp             GGGEEESSSSCCCEEECCCSSCEECCT---TSEEEEECSSGGGCCHH-HHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred             hhhccccCCCCCCEEEeeccceeEccC---CCceeeeEECccccCHH-HhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence            68999985  48999999999988632   22234567999999995 55566788999999999999999999999974


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .....  .               +..............+..++..+.+|+.+||+.||.+|||+.++++
T Consensus       359 ~~~~~--~---------------~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~  410 (573)
T 3uto_A          359 ENDDE--T---------------LRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALE  410 (573)
T ss_dssp             SSHHH--H---------------HHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             cCHHH--H---------------HHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            32111  1               1111111111112223445677899999999999999999999986

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.92  E-value=2.4e-25  Score=152.59  Aligned_cols=143  Identities=22%  Similarity=0.315  Sum_probs=97.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCcc--ccccccccccccCchhhhccC-----cccCccchHhHHHHHHHHHhc-
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSM--TQTQTLATIGYMAPVEYGREG-----RVSTNGDVYSFGIMLMEAFTR-   72 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~-----~~~~~~Di~s~g~~~~~~~~g-   72 (164)
                      |+|||++.++.+||+|||+++.........  ......|++.|+|||.+....     .++.++||||+|+++|++++| 
T Consensus       141 p~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~  220 (301)
T 3q4u_A          141 SKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRM  220 (301)
T ss_dssp             GGGEEECTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred             hHhEEEcCCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhh
Confidence            689999999999999999997753222211  122347899999996654332     344689999999999999999 


Q ss_pred             ---------CCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHH
Q 039452           73 ---------KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAK  143 (164)
Q Consensus        73 ---------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~  143 (164)
                               ..||..............         ....................++..+.+++.+||+.||.+|||++
T Consensus       221 ~~~~~~~~~~~pf~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~  291 (301)
T 3q4u_A          221 VSNGIVEDYKPPFYDVVPNDPSFEDMR---------KVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTAL  291 (301)
T ss_dssp             CBTTBCCCCCCTTTTTSCSSCCHHHHH---------HHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHH
T ss_pred             cCccccccccccccccCCCCcchhhhh---------HHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHH
Confidence                     777765433332222111         11111111111111222345677899999999999999999999


Q ss_pred             HHHHHHHHH
Q 039452          144 EIVTELSKI  152 (164)
Q Consensus       144 ~vl~~l~~~  152 (164)
                      ++++.|+++
T Consensus       292 ~i~~~L~~i  300 (301)
T 3q4u_A          292 RIKKTLTKI  300 (301)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHhcc
Confidence            999999876

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.92  E-value=2e-26  Score=170.75  Aligned_cols=125  Identities=22%  Similarity=0.298  Sum_probs=91.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||||+.+|++||+|||+|+.+...    .....+||+.|+|||.+..+..++.++|+||+||++|+|++|..||....
T Consensus       320 PeNILld~~G~vKL~DFGlA~~~~~~----~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~  395 (689)
T 3v5w_A          320 PANILLDEHGHVRISDLGLACDFSKK----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK  395 (689)
T ss_dssp             GGGEEECTTSCEEECCCTTCEECSSC----CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGG
T ss_pred             hHHeEEeCCCCEEecccceeeecCCC----CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            78999999999999999999876322    22346799999999666556678999999999999999999999997533


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCC-----HHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRIN-----AKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~vl~  147 (164)
                      .....  ..            ........    ...+..+++++.+|+.+||..||.+|++     ++++++
T Consensus       396 ~~~~~--~i------------~~~i~~~~----~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~  449 (689)
T 3v5w_A          396 TKDKH--EI------------DRMTLTMA----VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  449 (689)
T ss_dssp             CCCHH--HH------------HHHHHHCC----CCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred             hHHHH--HH------------HHhhcCCC----CCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence            22211  10            00000000    1122345667999999999999999998     577664

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.92  E-value=1.2e-25  Score=158.38  Aligned_cols=136  Identities=24%  Similarity=0.399  Sum_probs=99.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+|||++.++.+||+|||+++.+.............+++.|+|||.+ ....++.++|+||+||++|+|++ |..||...
T Consensus       231 p~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~-~~~~~~~~~DvwslG~il~ellt~g~~p~~~~  309 (370)
T 2psq_A          231 ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL-FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI  309 (370)
T ss_dssp             GGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHH-HTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             hhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHh-cCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence            68999999999999999999876332222223344567899999544 45668889999999999999998 99998753


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhh
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLF  157 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~  157 (164)
                      .....  .            ..+....      ....+..++..+.+++.+||+.||.+|||+.++++.|+.+.....
T Consensus       310 ~~~~~--~------------~~~~~~~------~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~  367 (370)
T 2psq_A          310 PVEEL--F------------KLLKEGH------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT  367 (370)
T ss_dssp             CGGGH--H------------HHHHTTC------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred             CHHHH--H------------HHHhcCC------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence            22111  1            1111111      011223455668999999999999999999999999999986543

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.92  E-value=1.4e-24  Score=150.90  Aligned_cols=147  Identities=23%  Similarity=0.379  Sum_probs=97.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCcc--ccccccccccccCchhhhccCcccC------ccchHhHHHHHHHHHhc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSM--TQTQTLATIGYMAPVEYGREGRVST------NGDVYSFGIMLMEAFTR   72 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~------~~Di~s~g~~~~~~~~g   72 (164)
                      |+|||++.++.+||+|||+++.+.......  ......|++.|+|||.+. ......      ++||||+||++|+|++|
T Consensus       170 p~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~~~~~~~DiwslG~il~el~tg  248 (337)
T 3mdy_A          170 SKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLD-ESLNRNHFQSYIMADMYSFGLILWEVARR  248 (337)
T ss_dssp             GGGEEECTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHT-TCCCTTCTHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hHHEEECCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcc-cccCCccccCccccchHHHHHHHHHHHhc
Confidence            689999999999999999997753222111  122456899999996554 333333      38999999999999999


Q ss_pred             ----------CCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCH
Q 039452           73 ----------KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINA  142 (164)
Q Consensus        73 ----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  142 (164)
                                ..||.............         .....................++..+.+++.+||+.||.+|||+
T Consensus       249 ~~~~~~~~~~~~p~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~  319 (337)
T 3mdy_A          249 CVSGGIVEEYQLPYHDLVPSDPSYEDM---------REIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTA  319 (337)
T ss_dssp             BCBTTBCCCCCCTTTTTSCSSCCHHHH---------HHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCH
T ss_pred             cCcccccccccccHhhhcCCCCchhhh---------HHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCH
Confidence                      56665433322222111         11111111111122222334677889999999999999999999


Q ss_pred             HHHHHHHHHHHHHhh
Q 039452          143 KEIVTELSKIRDSLF  157 (164)
Q Consensus       143 ~~vl~~l~~~~~~~~  157 (164)
                      .++++.|+.+.++..
T Consensus       320 ~ell~~L~~l~~~~~  334 (337)
T 3mdy_A          320 LRVKKTLAKMSESQD  334 (337)
T ss_dssp             HHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHhhcc
Confidence            999999999987653

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.92  E-value=2e-24  Score=151.80  Aligned_cols=147  Identities=14%  Similarity=0.079  Sum_probs=102.3

Q ss_pred             CcceEec--CCceEEEeccccceeccCCCCcc-----ccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcC
Q 039452            1 PSNVLLD--DNMVAHLSDFGIAKLLIGEDQSM-----TQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRK   73 (164)
Q Consensus         1 p~Nill~--~~~~~kl~dfg~~~~~~~~~~~~-----~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~   73 (164)
                      |+|||++  .++.+||+|||+++.+.......     ......||+.|+||| +..+..++.++||||+||++|+|++|.
T Consensus       180 p~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE-~~~~~~~~~~~Di~slG~~l~el~~g~  258 (364)
T 3op5_A          180 ASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSID-AHNGVAPSRRGDLEILGYCMIQWLTGH  258 (364)
T ss_dssp             GGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHH-HHTTCCCCHHHHHHHHHHHHHHHHHSC
T ss_pred             HHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHH-HhCCCCCCchhhHHHHHHHHHHHHhCC
Confidence            6899999  88999999999998763221111     112345899999995 445556889999999999999999999


Q ss_pred             CCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHH
Q 039452           74 KPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIR  153 (164)
Q Consensus        74 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~  153 (164)
                      .||........ ...............+++....         ...++..+.+++..||+.||.+||++.++++.|..+.
T Consensus       259 ~Pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~  328 (364)
T 3op5_A          259 LPWEDNLKDPK-YVRDSKIRYRENIASLMDKCFP---------AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGL  328 (364)
T ss_dssp             CTTGGGTTCHH-HHHHHHHHHHHCHHHHHHHHSC---------TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred             CCccccccCHH-HHHHHHHHhhhhHHHHHHHhcc---------cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Confidence            99975333222 1111111111222222222211         1233566899999999999999999999999999998


Q ss_pred             HHhhc
Q 039452          154 DSLFR  158 (164)
Q Consensus       154 ~~~~~  158 (164)
                      +.+..
T Consensus       329 ~~~~~  333 (364)
T 3op5_A          329 KAIGS  333 (364)
T ss_dssp             HHTTC
T ss_pred             HHcCC
Confidence            87654

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.92  E-value=7.9e-25  Score=149.83  Aligned_cols=145  Identities=12%  Similarity=0.071  Sum_probs=101.2

Q ss_pred             CcceEecCCce-----EEEeccccceeccCCCCc-----cccccccccccccCchhhhccCcccCccchHhHHHHHHHHH
Q 039452            1 PSNVLLDDNMV-----AHLSDFGIAKLLIGEDQS-----MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAF   70 (164)
Q Consensus         1 p~Nill~~~~~-----~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~   70 (164)
                      |+||+++.++.     +||+|||+++........     .......|++.|+|||. .....++.++||||+|+++|+++
T Consensus       134 p~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Di~slG~il~el~  212 (298)
T 1csn_A          134 PDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINT-HLGREQSRRDDLEALGHVFMYFL  212 (298)
T ss_dssp             GGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHH-HTTCCCCHHHHHHHHHHHHHHHH
T ss_pred             HHHEEeccCCCCCCCeEEEEECccccccccccccccccccCccCCCCCcccCCchh-hcCCCCChHHHHHHHHHHHHHHH
Confidence            68999987765     999999999876422211     11234568999999954 45566788999999999999999


Q ss_pred             hcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHH
Q 039452           71 TRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELS  150 (164)
Q Consensus        71 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~  150 (164)
                      +|..||..........  ....        +.....   ..........++..+.+++.+||+.||++|||+++|++.|.
T Consensus       213 ~g~~pf~~~~~~~~~~--~~~~--------~~~~~~---~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~  279 (298)
T 1csn_A          213 RGSLPWQGLKAATNKQ--KYER--------IGEKKQ---STPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFS  279 (298)
T ss_dssp             HSSCTTSSCCSCCHHH--HHHH--------HHHHHH---HSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred             cCCCCcchhhccccHH--HHHH--------HHhhcc---CccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHH
Confidence            9999997643322111  0000        000000   00111112245667999999999999999999999999999


Q ss_pred             HHHHHhhcc
Q 039452          151 KIRDSLFRN  159 (164)
Q Consensus       151 ~~~~~~~~~  159 (164)
                      ++.+.+...
T Consensus       280 ~~~~~~~~~  288 (298)
T 1csn_A          280 KVLERLNTT  288 (298)
T ss_dssp             HHHHHTTCC
T ss_pred             HHHHhcCCC
Confidence            999887643

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.92  E-value=8.3e-26  Score=159.59  Aligned_cols=134  Identities=27%  Similarity=0.421  Sum_probs=95.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+|||++.++.+||+|||+++...............++..|+|||. .....++.++||||||+++|++++ |..||...
T Consensus       241 p~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~  319 (377)
T 3cbl_A          241 ARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEA-LNYGRYSSESDVWSFGILLWETFSLGASPYPNL  319 (377)
T ss_dssp             GGGEEECTTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHH-HHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTS
T ss_pred             HHHEEEcCCCcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhH-hccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999986422111111122335678999954 445668899999999999999998 99998753


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDS  155 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~  155 (164)
                      ....              ....+....      ....+..++..+.+++.+||+.||++|||++++++.|+++.+.
T Consensus       320 ~~~~--------------~~~~~~~~~------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~  375 (377)
T 3cbl_A          320 SNQQ--------------TREFVEKGG------RLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR  375 (377)
T ss_dssp             CHHH--------------HHHHHHTTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CHHH--------------HHHHHHcCC------CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence            2111              111111111      1112334566789999999999999999999999999999765

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.92  E-value=8.5e-26  Score=157.09  Aligned_cols=161  Identities=19%  Similarity=0.227  Sum_probs=100.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCC------ccccccccccccccCchhhhcc------CcccCccchHhHHHHHHH
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQ------SMTQTQTLATIGYMAPVEYGRE------GRVSTNGDVYSFGIMLME   68 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~------~~~~~~~~~~~~~~~pe~~~~~------~~~~~~~Di~s~g~~~~~   68 (164)
                      |+|||++.++.+||+|||+++.+.....      ........|+..|+|||.+...      ..++.++||||+||++|+
T Consensus       148 p~Nill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~e  227 (336)
T 3g2f_A          148 SRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWE  227 (336)
T ss_dssp             GGGEEECTTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred             cceEEEcCCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHH
Confidence            6899999999999999999987632211      1112234689999999665432      345678999999999999


Q ss_pred             HHhcCCCCCccccCch---hHHHHHHHhhh-hhhHHHhhhhc-ccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHH
Q 039452           69 AFTRKKPTDEMFSGEM---TLKRWINDLLS-VSVMEVVDANL-LTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAK  143 (164)
Q Consensus        69 ~~~g~~p~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~  143 (164)
                      +++|..||........   ........... ......+.... .............+++.+.+++.+||+.||++|||++
T Consensus       228 ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~  307 (336)
T 3g2f_A          228 IFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQ  307 (336)
T ss_dssp             HHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHH
T ss_pred             HHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchH
Confidence            9999776543211111   00000000000 00111111111 0111111112234667799999999999999999999


Q ss_pred             HHHHHHHHHHHHhhccCC
Q 039452          144 EIVTELSKIRDSLFRNVG  161 (164)
Q Consensus       144 ~vl~~l~~~~~~~~~~~~  161 (164)
                      ++++.|..+.+.+.+|-+
T Consensus       308 e~l~~L~~ll~~~~~~~~  325 (336)
T 3g2f_A          308 XAEERMAELMMIWERNKS  325 (336)
T ss_dssp             HHHHHHHHHHHCCCC---
T ss_pred             HHHHHHHHHHHHHHhccc
Confidence            999999999998887643

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.92  E-value=1.5e-25  Score=155.51  Aligned_cols=135  Identities=24%  Similarity=0.395  Sum_probs=95.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+|||++.++.+||+|||+++.+.............++..|+|||.+ ....++.++||||+|+++|++++ |..||...
T Consensus       145 p~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~-~~~~~~~~~Di~slG~il~ellt~g~~p~~~~  223 (327)
T 3poz_A          145 ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI-LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI  223 (327)
T ss_dssp             GGGEEEEETTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             hheEEECCCCCEEEccCcceeEccCCcccccccCCCccccccChHHh-ccCCCCchhhhhhhHHHHHHHHhcCCCCccCC
Confidence            68999999999999999999876333322233344567899999554 45668899999999999999999 99999753


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHh
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL  156 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~  156 (164)
                      ....  .            ...+.....      ...+..++..+.+++.+||+.||.+|||+.++++.|..+.+..
T Consensus       224 ~~~~--~------------~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~~  280 (327)
T 3poz_A          224 PASE--I------------SSILEKGER------LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP  280 (327)
T ss_dssp             CGGG--H------------HHHHHTTCC------CCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTSH
T ss_pred             CHHH--H------------HHHHHcCCC------CCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhhh
Confidence            2221  1            111111111      1112334556889999999999999999999999999887643

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.92  E-value=3.1e-25  Score=155.53  Aligned_cols=136  Identities=21%  Similarity=0.362  Sum_probs=98.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+|||++.++.+||+|||++..+.............++..|+|||.+ ....++.++||||+|+++|++++ |..||...
T Consensus       221 p~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~-~~~~~~~~~Di~slG~il~ellt~g~~p~~~~  299 (359)
T 3vhe_A          221 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI-FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV  299 (359)
T ss_dssp             GGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred             hhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChhhh-cCCCCCchhhhhhHHHHHHHHHhcCCCCCCcc
Confidence            68999999999999999999865333333334455678899999554 45668899999999999999998 99999754


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHh
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL  156 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~  156 (164)
                      ........             .+.....      ...+..+++.+.+++.+||+.||.+|||++++++.|+.+.+..
T Consensus       300 ~~~~~~~~-------------~~~~~~~------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~  357 (359)
T 3vhe_A          300 KIDEEFCR-------------RLKEGTR------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN  357 (359)
T ss_dssp             CCSHHHHH-------------HHHHTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             chhHHHHH-------------HHHcCCC------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence            32221111             1111100      1112234556899999999999999999999999999988654

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.92  E-value=1.7e-24  Score=149.77  Aligned_cols=148  Identities=27%  Similarity=0.438  Sum_probs=101.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||+++...............|+..|+|||.+ ....++.++|+||+|+++|++++|..||....
T Consensus       167 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~il~ell~g~~p~~~~~  245 (321)
T 2qkw_B          167 SINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYF-IKGRLTEKSDVYSFGVVLFEVLCARSAIVQSL  245 (321)
T ss_dssp             STTEEECTTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHH-HHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSS
T ss_pred             HHHEEECCCCCEEEeecccccccccccccccccccCCCccccCHHHh-cCCCCCcccchHhHHHHHHHHHhCCCcccccC
Confidence            78999999999999999999865322222223345689999999554 45568899999999999999999999997543


Q ss_pred             cCch-hHHHHHHHhh-hhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHH
Q 039452           81 SGEM-TLKRWINDLL-SVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDS  155 (164)
Q Consensus        81 ~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~  155 (164)
                      .... ....+..... .......++      .......+..++..+.+++.+||+.||++|||+.++++.|+.+.+.
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~  316 (321)
T 2qkw_B          246 PREMVNLAEWAVESHNNGQLEQIVD------PNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL  316 (321)
T ss_dssp             SSSCCCHHHHTHHHHTTTCCCSSSS------SSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             cHHHHHHHHHhhhccccccHHHhcC------hhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence            3221 1111111100 000000010      1111123346677899999999999999999999999999988753

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.92  E-value=1.2e-24  Score=148.70  Aligned_cols=143  Identities=14%  Similarity=0.067  Sum_probs=101.1

Q ss_pred             CcceEe---cCCceEEEeccccceeccCCCCc-----cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhc
Q 039452            1 PSNVLL---DDNMVAHLSDFGIAKLLIGEDQS-----MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTR   72 (164)
Q Consensus         1 p~Nill---~~~~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g   72 (164)
                      |+|||+   +.++.+||+|||+++........     .......++..|+|||. .....++.++||||+|+++|++++|
T Consensus       133 p~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Di~slG~il~~l~~g  211 (296)
T 4hgt_A          133 PDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINT-HLGIEQSRRDDLESLGYVLMYFNLG  211 (296)
T ss_dssp             GGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHH-HTTCCCCHHHHHHHHHHHHHHHHHS
T ss_pred             HHHeeeeccCCCCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHH-hcCCCCCchhHHHHHHHHHHHHhcC
Confidence            689999   78899999999999876322211     12234568999999954 4555688899999999999999999


Q ss_pred             CCCCCccccCch--hHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHH
Q 039452           73 KKPTDEMFSGEM--TLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELS  150 (164)
Q Consensus        73 ~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~  150 (164)
                      ..||........  ........            ..   ..........++..+.+++.+||+.||++|||++++++.|+
T Consensus       212 ~~pf~~~~~~~~~~~~~~~~~~------------~~---~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~  276 (296)
T 4hgt_A          212 SLPWQGLKAATKRQKYERISEK------------KM---STPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFR  276 (296)
T ss_dssp             SCTTSSCCCSSSSSHHHHHHHH------------HH---HSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHH
T ss_pred             CCCCcccchhhhhhhhhhhhcc------------cc---cchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHH
Confidence            999976433221  11110000            00   00011111234566899999999999999999999999999


Q ss_pred             HHHHHhhcc
Q 039452          151 KIRDSLFRN  159 (164)
Q Consensus       151 ~~~~~~~~~  159 (164)
                      ++.++....
T Consensus       277 ~~~~~~~~~  285 (296)
T 4hgt_A          277 NLFHRQGFS  285 (296)
T ss_dssp             HHHHHHTCC
T ss_pred             HHHHHhCCC
Confidence            999887643

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.92  E-value=7.7e-25  Score=155.13  Aligned_cols=145  Identities=22%  Similarity=0.284  Sum_probs=91.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCC-------------------ccccccccccccccCchhhhccCcccCccchHh
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQ-------------------SMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS   61 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~-------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s   61 (164)
                      |+|||++.++.+||+|||+++.+.....                   ........||+.|+|||.+.....++.++||||
T Consensus       137 p~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwS  216 (388)
T 3oz6_A          137 PSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWS  216 (388)
T ss_dssp             GGGEEECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHH
T ss_pred             HHHeEEcCCCCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHH
Confidence            7899999999999999999987532110                   111233578999999976665567889999999


Q ss_pred             HHHHHHHHHhcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhccc----------------c----cchh--------
Q 039452           62 FGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLT----------------R----EDRH--------  113 (164)
Q Consensus        62 ~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~----~~~~--------  113 (164)
                      +||++|+|++|..||.+..... .+.... .....+..+.+......                .    ....        
T Consensus       217 lG~il~ell~g~~pf~~~~~~~-~~~~i~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (388)
T 3oz6_A          217 LGCILGEILCGKPIFPGSSTMN-QLERII-GVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLK  294 (388)
T ss_dssp             HHHHHHHHHHSSCSCCCSSHHH-HHHHHH-HHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCCCCHHH-HHHHHH-HhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhccc
Confidence            9999999999999997532211 111111 11111111100000000                0    0000        


Q ss_pred             hhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452          114 FAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus       114 ~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ......+++.+.+++.+||..||++|||++++++
T Consensus       295 ~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~  328 (388)
T 3oz6_A          295 INPKADCNEEALDLLDKLLQFNPNKRISANDALK  328 (388)
T ss_dssp             HCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             ccccccCCHHHHHHHHHhhccCcccCCCHHHHhC
Confidence            0001134567899999999999999999999986

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.91  E-value=2e-24  Score=149.81  Aligned_cols=154  Identities=19%  Similarity=0.204  Sum_probs=99.9

Q ss_pred             CcceEecCCc-eEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDDNM-VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+|||++.++ .+||+|||+++.+....   ......++..|+|||.+.....++.++||||+||++|+|++|..||...
T Consensus       158 p~Nil~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~  234 (330)
T 3nsz_A          158 PHNVMIDHEHRKLRLIDWGLAEFYHPGQ---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHG  234 (330)
T ss_dssp             GGGEEEETTTTEEEECCCTTCEECCTTC---CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred             HHHEEEcCCCCEEEEEeCCCceEcCCCC---ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence            6899999766 89999999998753221   2234568889999977665567889999999999999999999999643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccc-----------------hhhhhHHHHHHHHHHHHhhccccCccCCCCH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTRED-----------------RHFAAKQQCVSFVFNLAMECTIESPERRINA  142 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  142 (164)
                      ......+.............+.+.........                 .....+..++..+.+++.+||+.||.+|||+
T Consensus       235 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta  314 (330)
T 3nsz_A          235 HDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA  314 (330)
T ss_dssp             SSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCH
T ss_pred             CchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCH
Confidence            33322222222222222222222211110000                 0011122356779999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhccCCCC
Q 039452          143 KEIVTELSKIRDSLFRNVGAD  163 (164)
Q Consensus       143 ~~vl~~l~~~~~~~~~~~~~~  163 (164)
                      +++++      ...+.++..|
T Consensus       315 ~e~l~------hp~f~~~~~~  329 (330)
T 3nsz_A          315 REAME------HPYFYTVVKD  329 (330)
T ss_dssp             HHHHT------SGGGTTCC--
T ss_pred             HHHhc------CccHhhhccC
Confidence            99987      4555444443

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.91  E-value=3.7e-25  Score=151.09  Aligned_cols=139  Identities=24%  Similarity=0.352  Sum_probs=88.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhh--ccCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYG--REGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~--~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+||+++.++.+||+|||++................|+..|+|||.+.  ....++.++||||+|+++|++++|..||..
T Consensus       148 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~  227 (289)
T 3og7_A          148 SNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSN  227 (289)
T ss_dssp             GGGEEEETTTEEEECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred             cceEEECCCCCEEEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccc
Confidence            689999999999999999987653222222233456899999996654  244577899999999999999999999975


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRD  154 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~  154 (164)
                      ...... ..            ..+.......  ........++..+.+++.+||+.||.+|||+.++++.|+.+.+
T Consensus       228 ~~~~~~-~~------------~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~  288 (289)
T 3og7_A          228 INNRDQ-II------------EMVGRGSLSP--DLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR  288 (289)
T ss_dssp             CCCHHH-HH------------HHHHHTSCCC--CTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             cchHHH-HH------------HHhcccccCc--chhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence            332211 11            1111111110  0111123455678999999999999999999999999988753

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.91  E-value=4.6e-25  Score=151.92  Aligned_cols=140  Identities=24%  Similarity=0.367  Sum_probs=98.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCcc------------ccccccccccccCchhhhccCcccCccchHhHHHHHHH
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSM------------TQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLME   68 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~------------~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~   68 (164)
                      |+||+++.++.+||+|||.++.+.......            ......|++.|+|||. .....++.++||||+|+++|+
T Consensus       136 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Di~slG~~l~e  214 (310)
T 3s95_A          136 SHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEM-INGRSYDEKVDVFSFGIVLCE  214 (310)
T ss_dssp             TTSEEECTTSCEEECCCTTCEECC--------------------CCCCSCGGGCCHHH-HTTCCCCTHHHHHHHHHHHHH
T ss_pred             cCeEEECCCCCEEEeecccceecccccccccccccccccccccccccCCCcceeCHHH-hcCCCCCcHHHHHHHHHHHHH
Confidence            789999999999999999998753221110            0113568999999954 456678899999999999999


Q ss_pred             HHhcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHH
Q 039452           69 AFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTE  148 (164)
Q Consensus        69 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  148 (164)
                      +++|..|+............        ........          ..+..+++.+.+++.+||+.||++|||++++++.
T Consensus       215 l~~g~~~~~~~~~~~~~~~~--------~~~~~~~~----------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~  276 (310)
T 3s95_A          215 IIGRVNADPDYLPRTMDFGL--------NVRGFLDR----------YCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHW  276 (310)
T ss_dssp             HHHTCCSSTTTSCBCTTSSB--------CHHHHHHH----------TCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HhcCCCCCcchhhhHHHHhh--------hhhccccc----------cCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            99999988653222211100        00001100          0123344558899999999999999999999999


Q ss_pred             HHHHHHHhhcc
Q 039452          149 LSKIRDSLFRN  159 (164)
Q Consensus       149 l~~~~~~~~~~  159 (164)
                      |+.+.+.+...
T Consensus       277 L~~l~~~~~~~  287 (310)
T 3s95_A          277 LETLRMHLAGH  287 (310)
T ss_dssp             HHHHHHHHHHC
T ss_pred             HHHHHHhccCc
Confidence            99999887653

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.91  E-value=1.2e-25  Score=156.72  Aligned_cols=140  Identities=25%  Similarity=0.391  Sum_probs=95.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||+++...............++..|+|||.+ ....++.++|+||+|+++|++++ |..||...
T Consensus       202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~-~~~~~~~~~Di~slG~il~el~t~g~~p~~~~  280 (343)
T 1luf_A          202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESI-FYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM  280 (343)
T ss_dssp             GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred             cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhh-ccCCcCcccccHHHHHHHHHHHhcCCCcCCCC
Confidence            68999999999999999998765322222223345678899999554 45568889999999999999998 99998643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhhcc
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRN  159 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~~~  159 (164)
                      ....  ..            ..+.....      ...+..++..+.+++.+||+.||.+|||+.++++.|+++.+.+..+
T Consensus       281 ~~~~--~~------------~~~~~~~~------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~~~  340 (343)
T 1luf_A          281 AHEE--VI------------YYVRDGNI------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAEGT  340 (343)
T ss_dssp             CHHH--HH------------HHHHTTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-----
T ss_pred             ChHH--HH------------HHHhCCCc------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhhhh
Confidence            2111  00            01111100      0112345566899999999999999999999999999999888766


Q ss_pred             CC
Q 039452          160 VG  161 (164)
Q Consensus       160 ~~  161 (164)
                      ++
T Consensus       341 ~~  342 (343)
T 1luf_A          341 VG  342 (343)
T ss_dssp             --
T ss_pred             cC
Confidence            54

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.91  E-value=4.6e-25  Score=152.67  Aligned_cols=136  Identities=20%  Similarity=0.393  Sum_probs=89.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+|||++.++.+||+|||+++.+.............+++.|+|||.+ ....++.++||||+||++|++++ |..||...
T Consensus       165 p~NIli~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~ell~~g~~p~~~~  243 (323)
T 3qup_A          165 ARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESL-ADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGI  243 (323)
T ss_dssp             GGGEEECTTSCEEECCCCC-----------------CCGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             cceEEEcCCCCEEEeeccccccccccccccccccccCcccccCchhh-cCCCCCCccchhhHHHHHHHHHhCCCCCcccc
Confidence            68999999999999999999875332222223334567889999554 45668889999999999999999 89998753


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhh
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLF  157 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~  157 (164)
                      .....  ..           .+....       ....+..++..+.+++.+||+.||.+|||+.++++.|+++.+...
T Consensus       244 ~~~~~--~~-----------~~~~~~-------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~  301 (323)
T 3qup_A          244 ENAEI--YN-----------YLIGGN-------RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLS  301 (323)
T ss_dssp             CGGGH--HH-----------HHHTTC-------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred             ChHHH--HH-----------HHhcCC-------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhh
Confidence            22211  10           001000       011123345668999999999999999999999999999987654

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.91  E-value=5.2e-25  Score=150.97  Aligned_cols=126  Identities=19%  Similarity=0.261  Sum_probs=90.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||++..+..  .........|++.|+|||. .....++.++||||+|+++|++++|..||....
T Consensus       144 p~Nil~~~~~~~kl~Dfg~~~~~~~--~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  220 (297)
T 3fxz_A          144 SDNILLGMDGSVKLTDFGFCAQITP--EQSKRSTMVGTPYWMAPEV-VTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN  220 (297)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECCS--TTCCBCCCCSCGGGCCHHH-HHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred             HHHEEECCCCCEEEeeCCCceecCC--cccccCCccCCcCccChhh-hcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999887532  2223344578999999954 455668899999999999999999999996432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ......             ......     ......+..++..+.+++.+||+.||++|||++++++
T Consensus       221 ~~~~~~-------------~~~~~~-----~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  269 (297)
T 3fxz_A          221 PLRALY-------------LIATNG-----TPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ  269 (297)
T ss_dssp             HHHHHH-------------HHHHHC-----SCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHH-------------HHHhCC-----CCCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            111000             000000     0111123345666899999999999999999999986

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.91  E-value=2.3e-24  Score=147.41  Aligned_cols=143  Identities=14%  Similarity=0.067  Sum_probs=100.9

Q ss_pred             CcceEe---cCCceEEEeccccceeccCCCCc-----cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhc
Q 039452            1 PSNVLL---DDNMVAHLSDFGIAKLLIGEDQS-----MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTR   72 (164)
Q Consensus         1 p~Nill---~~~~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g   72 (164)
                      |+||++   +.++.+||+|||+++........     .......++..|+|||. .....++.++||||+|+++|++++|
T Consensus       133 p~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Di~slG~il~~l~~g  211 (296)
T 3uzp_A          133 PDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINT-HLGIEQSRRDDLESLGYVLMYFNLG  211 (296)
T ss_dssp             GGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHH-HTTCCCCHHHHHHHHHHHHHHHHHS
T ss_pred             HHHeEEecCCCCCeEEEeeCCCcccccccccccccccccccccccccccCChhh-hcCCCCCcchhhHHHHHHHHHHHhC
Confidence            689999   47889999999999876432221     11234568999999955 4455688899999999999999999


Q ss_pred             CCCCCccccCch--hHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHH
Q 039452           73 KKPTDEMFSGEM--TLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELS  150 (164)
Q Consensus        73 ~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~  150 (164)
                      ..||........  ........            ..   ..........++..+.+++.+||+.||.+|||++++++.|+
T Consensus       212 ~~pf~~~~~~~~~~~~~~~~~~------------~~---~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~  276 (296)
T 3uzp_A          212 SLPWQGLKAATKRQKYERISEK------------KM---STPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFR  276 (296)
T ss_dssp             SCTTSSCCCSSSSSHHHHHHHH------------HH---HSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHH
T ss_pred             CCCCCCcCchhhhhhhhhhccc------------cc---CCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHH
Confidence            999976432211  11111000            00   00011112334566899999999999999999999999999


Q ss_pred             HHHHHhhcc
Q 039452          151 KIRDSLFRN  159 (164)
Q Consensus       151 ~~~~~~~~~  159 (164)
                      ++.+.....
T Consensus       277 ~~~~~~~~~  285 (296)
T 3uzp_A          277 NLFHRQGFS  285 (296)
T ss_dssp             HHHHHTTCC
T ss_pred             HHHHhcCCc
Confidence            998877653

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.91  E-value=4.4e-25  Score=153.21  Aligned_cols=135  Identities=24%  Similarity=0.386  Sum_probs=91.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+|||++.++.+||+|||+++.+.............++..|+|||.+ ....++.++||||+|+++|++++ |..||...
T Consensus       145 p~NIl~~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~-~~~~~~~~~Di~slG~il~ell~~g~~p~~~~  223 (327)
T 3lzb_A          145 ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI-LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI  223 (327)
T ss_dssp             GGGEEEEETTEEEECCTTC----------------CCCGGGSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             HHHEEEcCCCCEEEccCcceeEccCccccccccCCCccccccCHHHH-cCCCCChHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence            68999999999999999999875332222223334567789999555 45668889999999999999999 99999753


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHh
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL  156 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~  156 (164)
                      .....              ...+.....      ...+..++..+.+++.+||+.||.+|||+.++++.|..+.+..
T Consensus       224 ~~~~~--------------~~~~~~~~~------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  280 (327)
T 3lzb_A          224 PASEI--------------SSILEKGER------LPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDP  280 (327)
T ss_dssp             CGGGH--------------HHHHHTTCC------CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSH
T ss_pred             CHHHH--------------HHHHHcCCC------CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCc
Confidence            22221              111111111      1112334556899999999999999999999999999988544

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.91  E-value=5.8e-25  Score=155.49  Aligned_cols=136  Identities=24%  Similarity=0.394  Sum_probs=98.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+|||++.++.+||+|||+++.+.............++..|+|||.+ ....++.++||||+||++|++++ |..||...
T Consensus       219 p~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~-~~~~~~~~~DiwslG~il~ellt~g~~p~~~~  297 (382)
T 3tt0_A          219 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL-FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV  297 (382)
T ss_dssp             GGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHH-HSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             cceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHh-cCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence            68999999999999999999875332222233345577899999554 46668889999999999999999 99998643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhh
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLF  157 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~  157 (164)
                      ....              ....+.....      ...+..++..+.+++.+||+.||++|||++++++.|+.+.+...
T Consensus       298 ~~~~--------------~~~~~~~~~~------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~  355 (382)
T 3tt0_A          298 PVEE--------------LFKLLKEGHR------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS  355 (382)
T ss_dssp             CHHH--------------HHHHHHTTCC------CCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSC
T ss_pred             CHHH--------------HHHHHHcCCC------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence            2111              1111111111      11123445668999999999999999999999999999987654

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.91  E-value=7.9e-25  Score=150.81  Aligned_cols=134  Identities=22%  Similarity=0.393  Sum_probs=97.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||+++...............+++.|+|||.+ ....++.++|+||+|+++|++++ |..||...
T Consensus       178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~el~t~g~~p~~~~  256 (314)
T 2ivs_A          178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESL-FDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI  256 (314)
T ss_dssp             GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHH-HHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhh-cCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            68999999999999999999876332222223344567889999554 45668889999999999999999 99998753


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDS  155 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~  155 (164)
                      .....  .            ..+.....      ...+..++..+.+++.+||+.||.+|||+.++++.|+++.++
T Consensus       257 ~~~~~--~------------~~~~~~~~------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~  312 (314)
T 2ivs_A          257 PPERL--F------------NLLKTGHR------MERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK  312 (314)
T ss_dssp             CGGGH--H------------HHHHTTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             CHHHH--H------------HHhhcCCc------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence            22111  1            11111110      111234556689999999999999999999999999998764

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.91  E-value=6.3e-24  Score=147.92  Aligned_cols=148  Identities=18%  Similarity=0.260  Sum_probs=99.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCcc--ccccccccccccCchhhhccC-----cccCccchHhHHHHHHHHHhc-
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSM--TQTQTLATIGYMAPVEYGREG-----RVSTNGDVYSFGIMLMEAFTR-   72 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~-----~~~~~~Di~s~g~~~~~~~~g-   72 (164)
                      |+||+++.++.+||+|||+++.........  ......++..|+|||.+....     .++.++||||+|+++|++++| 
T Consensus       175 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~  254 (342)
T 1b6c_B          175 SKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRC  254 (342)
T ss_dssp             GGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred             HHHEEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhcc
Confidence            689999999999999999998763322211  223456899999996654332     233679999999999999999 


Q ss_pred             ---------CCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHH
Q 039452           73 ---------KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAK  143 (164)
Q Consensus        73 ---------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~  143 (164)
                               ..||............+..         .+.................++..+.+++.+||+.||++|||+.
T Consensus       255 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~  325 (342)
T 1b6c_B          255 SIGGIHEDYQLPYYDLVPSDPSVEEMRK---------VVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTAL  325 (342)
T ss_dssp             CBTTBCCCCCCTTTTTSCSSCCHHHHHH---------HHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHH
T ss_pred             CcCCcccccccCccccCcCcccHHHHHH---------HHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHH
Confidence                     6777654332222221111         1111111111111112235567799999999999999999999


Q ss_pred             HHHHHHHHHHHHhh
Q 039452          144 EIVTELSKIRDSLF  157 (164)
Q Consensus       144 ~vl~~l~~~~~~~~  157 (164)
                      ++++.|+++.++..
T Consensus       326 ~i~~~L~~i~~~~~  339 (342)
T 1b6c_B          326 RIKKTLSQLSQQEG  339 (342)
T ss_dssp             HHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHhc
Confidence            99999999987653

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.91  E-value=4e-25  Score=153.24  Aligned_cols=135  Identities=24%  Similarity=0.397  Sum_probs=95.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+|||++.++.+||+|||+++.+.............++..|+|||.+ ....++.++|+||+|+++|++++ |..||...
T Consensus       143 p~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~  221 (325)
T 3kex_A          143 ARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI-HFGKYTHQSDVWSYGVTVWELMTFGAEPYAGL  221 (325)
T ss_dssp             STTEEESSSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTS
T ss_pred             hheEEECCCCeEEECCCCcccccCcccccccccCCCCcccccChHHh-ccCCCChhhHhHHhHHHHHHHHhCCCCCcccc
Confidence            78999999999999999999876433333333445677899999554 45568889999999999999999 99999754


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHh
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL  156 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~  156 (164)
                      .....              ...+......      ..+..++..+.+++.+||+.||.+|||+.++++.|..+.+..
T Consensus       222 ~~~~~--------------~~~~~~~~~~------~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~  278 (325)
T 3kex_A          222 RLAEV--------------PDLLEKGERL------AQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDP  278 (325)
T ss_dssp             CTTHH--------------HHHHHTTCBC------CCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSH
T ss_pred             CHHHH--------------HHHHHcCCCC------CCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence            32211              1111111110      111223445788999999999999999999999999886543

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=6.6e-25  Score=153.11  Aligned_cols=139  Identities=18%  Similarity=0.300  Sum_probs=97.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||++..+.............+++.|+|||.+ ....++.++||||+|+++|++++ |..||...
T Consensus       200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~-~~~~~~~~~Di~slG~il~el~t~g~~p~~~~  278 (344)
T 1rjb_A          200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESL-FEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI  278 (344)
T ss_dssp             GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred             hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHh-ccCCCChhHhHHHHHHHHHHHHcCCCCCcccC
Confidence            68999999999999999999876433333233445577889999544 45568889999999999999998 99999754


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhhcc
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRN  159 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~~~  159 (164)
                      ..... ..            ..+......      ..+..++..+.+++.+||+.||.+|||+.++++.|..+.+.....
T Consensus       279 ~~~~~-~~------------~~~~~~~~~------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~  339 (344)
T 1rjb_A          279 PVDAN-FY------------KLIQNGFKM------DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEEA  339 (344)
T ss_dssp             CCSHH-HH------------HHHHTTCCC------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC------
T ss_pred             CcHHH-HH------------HHHhcCCCC------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHHH
Confidence            32221 11            111111111      112234566899999999999999999999999999988776543

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.91  E-value=2e-24  Score=148.91  Aligned_cols=144  Identities=19%  Similarity=0.221  Sum_probs=93.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||+++.+.  ..........+++.|+|||.+.....++.++|+||+||++|++++|..||....
T Consensus       147 p~NIl~~~~~~~kl~Dfg~a~~~~--~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~  224 (311)
T 3niz_A          147 PQNLLINSDGALKLADFGLARAFG--IPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVT  224 (311)
T ss_dssp             GGGEEECTTCCEEECCCTTCEETT--SCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             hHhEEECCCCCEEEccCcCceecC--CCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCC
Confidence            689999999999999999998752  222223445689999999766655668899999999999999999999997543


Q ss_pred             cCchhHHHHHHHhhhhhh---H------HHhhhhccc-ccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSV---M------EVVDANLLT-REDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~---~------~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .... .............   .      ...+..... ...........+++++.+++.+||+.||++|||++++++
T Consensus       225 ~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  300 (311)
T 3niz_A          225 DDDQ-LPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN  300 (311)
T ss_dssp             TTTH-HHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             hHHH-HHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            3322 1111111100000   0      000000000 000111112334567899999999999999999999987

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.91  E-value=4.8e-24  Score=146.60  Aligned_cols=144  Identities=26%  Similarity=0.469  Sum_probs=98.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||.++...............|++.|+|||.+.  ..++.++|+||+|+++|++++|..||....
T Consensus       161 p~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~--~~~~~~~Dv~slG~il~~l~~g~~p~~~~~  238 (307)
T 2nru_A          161 SANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALR--GEITPKSDIYSFGVVLLEIITGLPAVDEHR  238 (307)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHT--TEECTHHHHHHHHHHHHHHHHCCCSBCTTB
T ss_pred             HHHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhc--CCCCccchhHHHHHHHHHHHHCCCCcccCc
Confidence            689999999999999999998753322222333456899999996553  347889999999999999999999997543


Q ss_pred             cCchhHHHHHHHhhh--hhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHH
Q 039452           81 SGEMTLKRWINDLLS--VSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRD  154 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~  154 (164)
                      .... ...+......  ......++...       ...+...+..+.+++.+||+.||.+|||++++++.|+++.+
T Consensus       239 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~  306 (307)
T 2nru_A          239 EPQL-LLDIKEEIEDEEKTIEDYIDKKM-------NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA  306 (307)
T ss_dssp             SSSB-TTHHHHHHHTTSCCHHHHSCSSC-------SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred             chHH-HHHHHHHhhhhhhhhhhhccccc-------cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence            3221 1111111100  01111111111       11234556778999999999999999999999999998754

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.91  E-value=1.2e-24  Score=149.92  Aligned_cols=137  Identities=20%  Similarity=0.337  Sum_probs=98.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||+++...............++..|+|||.+ ....++.++|+||+|+++|++++ |..||...
T Consensus       173 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~ellt~g~~p~~~~  251 (313)
T 1t46_A          173 ARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI-FNCVYTFESDVWSYGIFLWELFSLGSSPYPGM  251 (313)
T ss_dssp             GGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred             cceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHh-cCCCCChHHHHHHHHHHHHHHHhCCCCCCCcc
Confidence            68999999999999999999876433322233344567889999554 45568889999999999999998 99998754


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhh
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLF  157 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~  157 (164)
                      ..... ..            ..+.......      .+..++..+.+++.+||+.||.+|||+.++++.|+++..+..
T Consensus       252 ~~~~~-~~------------~~~~~~~~~~------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~  310 (313)
T 1t46_A          252 PVDSK-FY------------KMIKEGFRML------SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST  310 (313)
T ss_dssp             CSSHH-HH------------HHHHHTCCCC------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred             cchhH-HH------------HHhccCCCCC------CcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhh
Confidence            32221 11            1111111100      112345568999999999999999999999999999887654

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.91  E-value=1.1e-24  Score=150.20  Aligned_cols=136  Identities=20%  Similarity=0.328  Sum_probs=91.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||+++.+.............++..|+|||.+ ....++.++|+||+|+++|++++ |..||...
T Consensus       175 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~el~~~g~~p~~~~  253 (313)
T 3brb_A          175 ARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESL-ADRVYTSKSDVWAFGVTMWEIATRGMTPYPGV  253 (313)
T ss_dssp             GGGEEECTTSCEEECSCSCC----------------CCGGGSCHHHH-HSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             cceEEEcCCCcEEEeecCcceecccccccCcccccCCCccccCchhh-cCCCccchhhhHHHHHHHHHHHhcCCCCCccC
Confidence            68999999999999999999765322222223334567889999544 55668889999999999999999 88888643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhh
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLF  157 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~  157 (164)
                      .....  .            ..+.....      ...+..++..+.+++.+||+.||.+|||++++++.|..+.+.+.
T Consensus       254 ~~~~~--~------------~~~~~~~~------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp  311 (313)
T 3brb_A          254 QNHEM--Y------------DYLLHGHR------LKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP  311 (313)
T ss_dssp             CGGGH--H------------HHHHTTCC------CCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred             CHHHH--H------------HHHHcCCC------CCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence            22111  1            00101100      01123345668999999999999999999999999999987754

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.91  E-value=1.5e-24  Score=149.55  Aligned_cols=136  Identities=21%  Similarity=0.362  Sum_probs=98.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||+++.+.............++..|+|||.+ ....++.++|+||+|+++|++++ |..||...
T Consensus       176 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~  254 (316)
T 2xir_A          176 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI-FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV  254 (316)
T ss_dssp             GGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             cceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhh-ccccccchhHHHHHHHHHHHHHhCCCCCCccc
Confidence            68999999999999999999875333333333445678899999554 45668889999999999999998 99998754


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHh
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL  156 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~  156 (164)
                      ........             .+.....      ...+..+++.+.+++.+||+.||.+|||+.++++.|..+.+.-
T Consensus       255 ~~~~~~~~-------------~~~~~~~------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  312 (316)
T 2xir_A          255 KIDEEFCR-------------RLKEGTR------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN  312 (316)
T ss_dssp             CCSHHHHH-------------HHHHTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             chhHHHHH-------------HhccCcc------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence            32221111             0111100      0112234556899999999999999999999999999988654

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.91  E-value=2.1e-24  Score=154.90  Aligned_cols=76  Identities=24%  Similarity=0.360  Sum_probs=57.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc--------------------cccccccccccccCchhhhccCcccCccchH
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS--------------------MTQTQTLATIGYMAPVEYGREGRVSTNGDVY   60 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~--------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~   60 (164)
                      |+|||++.++.+||+|||+++........                    .......||+.|+|||.+.....++.++|||
T Consensus       157 p~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~Diw  236 (432)
T 3n9x_A          157 PANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIW  236 (432)
T ss_dssp             GGGEEECTTCCEEECCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHH
T ss_pred             HHHeEECCCCCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccc
Confidence            78999999999999999999876322111                    1124567899999997666677789999999


Q ss_pred             hHHHHHHHHHhcCCCC
Q 039452           61 SFGIMLMEAFTRKKPT   76 (164)
Q Consensus        61 s~g~~~~~~~~g~~p~   76 (164)
                      |+||++|+|++|..||
T Consensus       237 SlG~il~ell~g~~p~  252 (432)
T 3n9x_A          237 STGCIFAELLNMLQSH  252 (432)
T ss_dssp             HHHHHHHHHHTTCTTT
T ss_pred             hHHHHHHHHHhccccc
Confidence            9999999999855444

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=1.5e-24  Score=147.88  Aligned_cols=142  Identities=24%  Similarity=0.353  Sum_probs=102.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc-cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS-MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~   78 (164)
                      |+||+++.++.+||+|||++..+...... .......++..|+|||.+ ....++.++|+||+|+++|++++ |..||..
T Consensus       138 p~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~ellt~g~~p~~~  216 (287)
T 1u59_A          138 ARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI-NFRKFSSRSDVWSYGVTMWEALSYGQKPYKK  216 (287)
T ss_dssp             GGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHH-HHCEECHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             hheEEEcCCCCEEECcccceeeeccCcceeeccccccccccccCHHHh-ccCCCCchhhHHHHHHHHHHHHcCCCCCccc
Confidence            68999999999999999999876322211 112233467889999544 45668889999999999999998 9999975


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhhc
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFR  158 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~~  158 (164)
                      .....  ..            ..+.....      ...+..++..+.+++.+||+.||.+|||+.++++.|..+..+...
T Consensus       217 ~~~~~--~~------------~~i~~~~~------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~  276 (287)
T 1u59_A          217 MKGPE--VM------------AFIEQGKR------MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS  276 (287)
T ss_dssp             CCTHH--HH------------HHHHTTCC------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHT
T ss_pred             CCHHH--HH------------HHHhcCCc------CCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence            32211  11            11111110      111234566799999999999999999999999999999998887


Q ss_pred             cCCCC
Q 039452          159 NVGAD  163 (164)
Q Consensus       159 ~~~~~  163 (164)
                      +...|
T Consensus       277 ~~~~~  281 (287)
T 1u59_A          277 KVEGH  281 (287)
T ss_dssp             TCSSC
T ss_pred             cccCC
Confidence            65443

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.91  E-value=2.2e-24  Score=149.06  Aligned_cols=143  Identities=24%  Similarity=0.250  Sum_probs=91.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||+++.+..  .........+++.|+|||.+.....++.++|+||+||++|+|++|..||....
T Consensus       136 p~NIl~~~~~~~kl~Dfg~~~~~~~--~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  213 (317)
T 2pmi_A          136 PQNLLINKRGQLKLGDFGLARAFGI--PVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTN  213 (317)
T ss_dssp             GGGEEECTTCCEEECCCSSCEETTS--CCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             hHHeEEcCCCCEEECcCccceecCC--CcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999987521  11223345689999999766555568899999999999999999999997532


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhh----cc-----cc--cch----hhhhHHHHHHHHHHHHhhccccCccCCCCHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDAN----LL-----TR--EDR----HFAAKQQCVSFVFNLAMECTIESPERRINAKEI  145 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~-----~~--~~~----~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v  145 (164)
                      ... .... +...............    ..     ..  ...    .......++..+.+++.+||+.||++|||++++
T Consensus       214 ~~~-~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~  291 (317)
T 2pmi_A          214 DEE-QLKL-IFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQA  291 (317)
T ss_dssp             HHH-HHHH-HHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             hHH-HHHH-HHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHH
Confidence            211 1111 1111100000000000    00     00  000    000112345678999999999999999999999


Q ss_pred             HH
Q 039452          146 VT  147 (164)
Q Consensus       146 l~  147 (164)
                      ++
T Consensus       292 l~  293 (317)
T 2pmi_A          292 LH  293 (317)
T ss_dssp             TT
T ss_pred             hC
Confidence            86

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.91  E-value=9.5e-25  Score=151.68  Aligned_cols=138  Identities=22%  Similarity=0.370  Sum_probs=99.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||+++...............++..|+|||.+ ....++.++||||+|+++|++++ |..||...
T Consensus       192 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~el~t~g~~p~~~~  270 (333)
T 2i1m_A          192 ARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESI-FDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI  270 (333)
T ss_dssp             GGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHH-HHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred             cceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHh-ccCCCChHHHHHHHHHHHHHHHcCCCCCCccc
Confidence            68999999999999999999865433332233345567889999554 45568889999999999999998 88998753


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhhc
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFR  158 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~~  158 (164)
                      ..... ..            ..+......      ..+..++..+.+++.+||+.||.+|||+.++++.|+.+.++..+
T Consensus       271 ~~~~~-~~------------~~~~~~~~~------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~  330 (333)
T 2i1m_A          271 LVNSK-FY------------KLVKDGYQM------AQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDRR  330 (333)
T ss_dssp             CSSHH-HH------------HHHHHTCCC------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred             chhHH-HH------------HHHhcCCCC------CCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhhhc
Confidence            32221 11            111111110      01222345688999999999999999999999999998876543

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.91  E-value=1.6e-24  Score=150.21  Aligned_cols=129  Identities=24%  Similarity=0.339  Sum_probs=92.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||++..+.............|++.|+|||.+......+.++||||+|+++|++++|..||....
T Consensus       133 p~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~  212 (323)
T 3tki_A          133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS  212 (323)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSC
T ss_pred             hHHEEEeCCCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCc
Confidence            68999999999999999999875322222233456789999999666544445778999999999999999999997543


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ........+..            ..      ........++..+.+++.+||+.||++|||+.++++
T Consensus       213 ~~~~~~~~~~~------------~~------~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~  261 (323)
T 3tki_A          213 DSCQEYSDWKE------------KK------TYLNPWKKIDSAPLALLHKILVENPSARITIPDIKK  261 (323)
T ss_dssp             TTSHHHHHHHT------------TC------TTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             hHHHHHHHHhc------------cc------ccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            33222221110            00      001112334566889999999999999999999876

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.91  E-value=1e-24  Score=151.30  Aligned_cols=136  Identities=26%  Similarity=0.420  Sum_probs=95.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc-cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS-MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~   78 (164)
                      |+|||++.++.+||+|||+++.+...... .......++..|+|||.+ ....++.++||||+|+++|++++ |..||..
T Consensus       179 p~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~-~~~~~~~~~Di~slG~il~ell~~g~~p~~~  257 (325)
T 3kul_A          179 ARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAI-AFRTFSSASDVWSFGVVMWEVLAYGERPYWN  257 (325)
T ss_dssp             GGGEEECTTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHH-HHCEECHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             cceEEECCCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHh-cCCCCCcHHHHHHHHHHHHHHHcCCCCCccc
Confidence            68999999999999999999876322211 112223456789999544 55668889999999999999998 9999864


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhh
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLF  157 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~  157 (164)
                      .....  ..            ..+....      ....+..++..+.+++..||..||.+|||+.++++.|+.+.+...
T Consensus       258 ~~~~~--~~------------~~~~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~  316 (325)
T 3kul_A          258 MTNRD--VI------------SSVEEGY------RLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE  316 (325)
T ss_dssp             SCHHH--HH------------HHHHTTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred             CCHHH--HH------------HHHHcCC------CCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence            32111  00            1111110      111223456678999999999999999999999999999987654

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.91  E-value=1.6e-24  Score=156.25  Aligned_cols=129  Identities=27%  Similarity=0.430  Sum_probs=94.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+|||++.++.+||+|||+++.....     .....++..|+|||. .....++.++||||||+++|++++ |..||...
T Consensus       317 p~Nill~~~~~~kl~DfG~a~~~~~~-----~~~~~~~~~y~aPE~-~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~  390 (450)
T 1k9a_A          317 ARNVLVSEDNVAKVSDFGLTKEASST-----QDTGKLPVKWTAPEA-LREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI  390 (450)
T ss_dssp             GGGEEECTTSCEEECCCTTCEECC-----------CCCTTTSCHHH-HHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTS
T ss_pred             HhhEEECCCCCEEEeeCCCccccccc-----ccCCCCCcceeCHHH-hcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            68999999999999999999864211     122356788999954 456668899999999999999998 99999754


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDS  155 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~  155 (164)
                      .....  .            ..+....      ....+..+++.+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus       391 ~~~~~--~------------~~i~~~~------~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~  446 (450)
T 1k9a_A          391 PLKDV--V------------PRVEKGY------KMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH  446 (450)
T ss_dssp             CTTTH--H------------HHHHTTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             CHHHH--H------------HHHHcCC------CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence            32221  0            1111110      1112345567799999999999999999999999999998764

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.91  E-value=1.4e-24  Score=148.47  Aligned_cols=150  Identities=21%  Similarity=0.374  Sum_probs=94.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc-cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS-MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||+++.+...... .......++..|+|||.+ ....++.++||||+|+++|++++|..|+...
T Consensus       142 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~  220 (295)
T 3ugc_A          142 TRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESL-TESKFSVASDVWSFGVVLYELFTYIEKSKSP  220 (295)
T ss_dssp             GGGEEEEETTEEEECCCCSCC-------------CTTCGGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHHTTCTTCSH
T ss_pred             HhhEEEcCCCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHh-cCCCCChHHHHHHHHHHHHHHHhcccccCCC
Confidence            68999999999999999999875322211 122234467789999554 4556889999999999999999999987532


Q ss_pred             ccCchhHHHHHHHhhhh--hhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhh
Q 039452           80 FSGEMTLKRWINDLLSV--SVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLF  157 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~  157 (164)
                      ...   ...........  ..........   .......+..++..+.+++.+||+.||++|||++++++.|+++.+.+.
T Consensus       221 ~~~---~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l~  294 (295)
T 3ugc_A          221 PAE---FMRMIGNDKQGQMIVFHLIELLK---NNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA  294 (295)
T ss_dssp             HHH---HHHHHCTTCCTHHHHHHHHHHHH---TTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred             hHH---HHhhhcCccccchhHHHHHHHHh---ccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhcc
Confidence            110   00000000000  0001111000   011112234566779999999999999999999999999999987664

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.91  E-value=1.3e-24  Score=147.72  Aligned_cols=134  Identities=22%  Similarity=0.398  Sum_probs=87.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||+++.+.... ........+++.|+|||.+ ....++.++|+||+|+++|++++ |..||...
T Consensus       144 p~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~  221 (281)
T 1mp8_A          144 ARNVLVSSNDCVKLGDFGLSRYMEDST-YYKASKGKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGV  221 (281)
T ss_dssp             GGGEEEEETTEEEECC--------------------CCGGGCCHHHH-HHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             HHHEEECCCCCEEECccccccccCccc-ccccccCCCcccccChhhc-ccCCCCCccCchHHHHHHHHHHhcCCCCCCcC
Confidence            689999999999999999998753211 1122234567789999554 45667889999999999999996 89998753


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHh
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL  156 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~  156 (164)
                      .....  ..           .+.. ..      ....+..+++.+.+++.+||+.||++|||+.++++.|.++.++.
T Consensus       222 ~~~~~--~~-----------~i~~-~~------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~  278 (281)
T 1mp8_A          222 KNNDV--IG-----------RIEN-GE------RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE  278 (281)
T ss_dssp             CGGGH--HH-----------HHHT-TC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             CHHHH--HH-----------HHHc-CC------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence            32211  10           0000 00      01122345666899999999999999999999999999998764

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.91  E-value=7.7e-25  Score=152.03  Aligned_cols=123  Identities=22%  Similarity=0.233  Sum_probs=89.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||++..+...   .......|++.|+|||.+......+.++||||+||++|+|++|..||....
T Consensus       142 p~NIll~~~~~~kl~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  218 (328)
T 3fe3_A          142 AENLLLDADMNIKIADFGFSNEFTVG---GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN  218 (328)
T ss_dssp             GGGEEECTTSCEEECSTTCCGGGSSS---CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             HHHEEEcCCCCEEEeeccCceecCCC---CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC
Confidence            78999999999999999999765221   223445789999999666544444578999999999999999999997432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ...  ..            ..+.....       ..+..++..+.+++.+||..||.+|||++++++
T Consensus       219 ~~~--~~------------~~i~~~~~-------~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~  264 (328)
T 3fe3_A          219 LKE--LR------------ERVLRGKY-------RIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMK  264 (328)
T ss_dssp             HHH--HH------------HHHHHCCC-------CCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred             HHH--HH------------HHHHhCCC-------CCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            111  10            11111111       112234566889999999999999999999986

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.90  E-value=4.6e-24  Score=149.37  Aligned_cols=148  Identities=10%  Similarity=0.066  Sum_probs=100.6

Q ss_pred             CcceEecCCc--eEEEeccccceeccCCCCcc-----ccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcC
Q 039452            1 PSNVLLDDNM--VAHLSDFGIAKLLIGEDQSM-----TQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRK   73 (164)
Q Consensus         1 p~Nill~~~~--~~kl~dfg~~~~~~~~~~~~-----~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~   73 (164)
                      |+|||++.++  .+||+|||+++.+.......     ......|++.|+|||. .....++.++|+||+|+++|++++|.
T Consensus       187 p~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Di~slG~il~el~~g~  265 (352)
T 2jii_A          187 AENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDL-HKGCGPSRRSDLQSLGYCMLKWLYGF  265 (352)
T ss_dssp             GGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHH-HTTCCCCHHHHHHHHHHHHHHHHHSC
T ss_pred             HHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHH-HccCCCCchhhHHHHHHHHHHHHhCC
Confidence            6899999988  89999999998753221111     1133478999999954 44556888999999999999999999


Q ss_pred             CCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHH
Q 039452           74 KPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIR  153 (164)
Q Consensus        74 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~  153 (164)
                      .||.................        ....  ............++..+.+++.+||+.||.+|||++++++.|.++.
T Consensus       266 ~pf~~~~~~~~~~~~~~~~~--------~~~~--~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~  335 (352)
T 2jii_A          266 LPWTNCLPNTEDIMKQKQKF--------VDKP--GPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALL  335 (352)
T ss_dssp             CTTGGGTTCHHHHHHHHHHH--------HHSC--CCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred             CCcccCCcCHHHHHHHHHhc--------cCCh--hhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHH
Confidence            99975432222221111100        0000  0000000001123456899999999999999999999999999999


Q ss_pred             HHhhcc
Q 039452          154 DSLFRN  159 (164)
Q Consensus       154 ~~~~~~  159 (164)
                      +.....
T Consensus       336 ~~~~~~  341 (352)
T 2jii_A          336 QDLRVS  341 (352)
T ss_dssp             HHTTCC
T ss_pred             HhcCCC
Confidence            887643

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.90  E-value=2.6e-24  Score=147.07  Aligned_cols=144  Identities=20%  Similarity=0.142  Sum_probs=92.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||+++.+.  ..........++..|+|||.+.....++.++|+||+||++|++++|..|+....
T Consensus       129 p~Nil~~~~~~~kl~Dfg~~~~~~--~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~  206 (292)
T 3o0g_A          129 PQNLLINRNGELKLANFGLARAFG--IPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN  206 (292)
T ss_dssp             GGGEEECTTSCEEECCCTTCEECC--SCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCS
T ss_pred             HHHEEEcCCCCEEEeecccceecC--CccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCC
Confidence            689999999999999999998752  222223445789999999766555558899999999999999999888864322


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhh----c------ccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDAN----L------LTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~----~------~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .............. ..........    .      .............++..+.+++.+||+.||++|||++++++
T Consensus       207 ~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  282 (292)
T 3o0g_A          207 DVDDQLKRIFRLLG-TPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             SHHHHHHHHHHHHC-CCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CHHHHHHHHHHHhC-CCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence            22222222111110 0000000000    0      00000011112345667899999999999999999999986

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.90  E-value=8.1e-25  Score=152.32  Aligned_cols=123  Identities=23%  Similarity=0.345  Sum_probs=89.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||++..+...   .......|++.|+|||.+......+.++||||+|+++|++++|..||....
T Consensus       136 p~NIll~~~~~~kl~DFG~s~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~  212 (336)
T 3h4j_B          136 PENLLLDDNLNVKIADFGLSNIMTDG---NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEF  212 (336)
T ss_dssp             TTTEEECTTCCEEECCSSCTBTTTTS---BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSS
T ss_pred             hhhEEEcCCCCEEEEEeccceeccCC---cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCcc
Confidence            78999999999999999999865221   122345689999999665433334678999999999999999999997532


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ...                 .....    .......+..+++.+.+++.+||+.||.+|||++++++
T Consensus       213 ~~~-----------------~~~~i----~~~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~  258 (336)
T 3h4j_B          213 IPN-----------------LFKKV----NSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRR  258 (336)
T ss_dssp             STT-----------------CBCCC----CSSCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred             HHH-----------------HHHHH----HcCCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            111                 00000    01111123345666899999999999999999999976

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.90  E-value=1.8e-24  Score=149.87  Aligned_cols=143  Identities=20%  Similarity=0.178  Sum_probs=89.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||+++...  ..........++..|+|||.+.....++.++|+||+||++|++++|..||....
T Consensus       128 p~NIl~~~~~~~kl~Dfg~a~~~~--~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~  205 (324)
T 3mtl_A          128 PQNLLINERGELKLADFGLARAKS--IPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGST  205 (324)
T ss_dssp             GGGEEECTTCCEEECSSSEEECC--------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             HHHEEECCCCCEEEccCccccccc--CCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            689999999999999999997642  122223345679999999766655668899999999999999999999997532


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhh---------ccc--ccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDAN---------LLT--REDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~--~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ...  ....+...............         ...  ...........++..+.+++.+||+.||.+|||++++++
T Consensus       206 ~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  281 (324)
T 3mtl_A          206 VEE--QLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK  281 (324)
T ss_dssp             HHH--HHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHH--HHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence            211  11111111111100000000         000  001111222345667899999999999999999999987

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.90  E-value=1.6e-24  Score=152.83  Aligned_cols=137  Identities=21%  Similarity=0.405  Sum_probs=89.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCcc--ccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSM--TQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTD   77 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~   77 (164)
                      |+|||++.++.+||+|||+++.+.......  ......++..|+|||.+ ....++.++||||+|+++|++++ |..||.
T Consensus       220 p~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~DvwSlG~il~ellt~~~~p~~  298 (373)
T 3c1x_A          220 ARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAPPYP  298 (373)
T ss_dssp             GGGEEECTTCCEEECCC---------------------CCGGGSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCSCT
T ss_pred             hheEEECCCCCEEEeeccccccccccccccccccCCCCCcccccChHHh-cCCCCCcHHHHHHHHHHHHHHHhCcCCCCC
Confidence            689999999999999999998653221111  12234567889999544 45668889999999999999999 677776


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhh
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLF  157 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~  157 (164)
                      ........  ..            +....      ....+..++..+.+++.+||+.||.+|||++++++.|..+...+.
T Consensus       299 ~~~~~~~~--~~------------~~~~~------~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~  358 (373)
T 3c1x_A          299 DVNTFDIT--VY------------LLQGR------RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI  358 (373)
T ss_dssp             TSCSSCHH--HH------------HHTTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred             CCCHHHHH--HH------------HHcCC------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence            43322211  00            00000      011123455668999999999999999999999999999998776


Q ss_pred             c
Q 039452          158 R  158 (164)
Q Consensus       158 ~  158 (164)
                      .
T Consensus       359 ~  359 (373)
T 3c1x_A          359 G  359 (373)
T ss_dssp             S
T ss_pred             c
Confidence            4

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.90  E-value=9.1e-24  Score=146.68  Aligned_cols=143  Identities=14%  Similarity=0.079  Sum_probs=99.1

Q ss_pred             CcceEecCCce-----EEEeccccceeccCCCCcc-----ccccccccccccCchhhhccCcccCccchHhHHHHHHHHH
Q 039452            1 PSNVLLDDNMV-----AHLSDFGIAKLLIGEDQSM-----TQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAF   70 (164)
Q Consensus         1 p~Nill~~~~~-----~kl~dfg~~~~~~~~~~~~-----~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~   70 (164)
                      |+|||++.++.     +||+|||+++.+.......     ......||+.|+|||. .....++.++|+||+|+++|+++
T Consensus       133 p~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Di~slG~il~ell  211 (330)
T 2izr_A          133 PENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINT-HLGKEQSRRDDLEALGHMFMYFL  211 (330)
T ss_dssp             GGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHH-HTTCCCCHHHHHHHHHHHHHHHH
T ss_pred             HHHeeeccCCCCCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHH-HcCCCCCchhHHHHHHHHHHHHh
Confidence            68999998887     9999999998753222111     1234678999999954 44566888999999999999999


Q ss_pred             hcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHH
Q 039452           71 TRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELS  150 (164)
Q Consensus        71 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~  150 (164)
                      +|..||.........  ......        .....   ..........++ .+.+++..||+.||.+||++++|++.|.
T Consensus       212 ~g~~Pf~~~~~~~~~--~~~~~i--------~~~~~---~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~  277 (330)
T 2izr_A          212 RGSLPWQGLKADTLK--ERYQKI--------GDTKR---ATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFT  277 (330)
T ss_dssp             HSSCTTTTCCCSSHH--HHHHHH--------HHHHH---HSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred             cCCCCccccccccHH--HHHHHH--------Hhhhc---cCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHH
Confidence            999999764332211  111110        00000   000000111233 6899999999999999999999999999


Q ss_pred             HHHHHhhc
Q 039452          151 KIRDSLFR  158 (164)
Q Consensus       151 ~~~~~~~~  158 (164)
                      ++.+.+..
T Consensus       278 ~~~~~~~~  285 (330)
T 2izr_A          278 DLFDRKGY  285 (330)
T ss_dssp             HHHHHTTC
T ss_pred             HHHHHcCC
Confidence            98877643

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.90  E-value=8.3e-24  Score=148.89  Aligned_cols=140  Identities=19%  Similarity=0.197  Sum_probs=93.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||+++....     ......++..|+|||.+.....++.++|+||+||++++|++|..||....
T Consensus       156 p~NIll~~~~~~kl~Dfg~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  230 (367)
T 1cm8_A          156 PGNLAVNEDCELKILDFGLARQADS-----EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSD  230 (367)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECCS-----SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             HHHEEEcCCCCEEEEeeeccccccc-----ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999987521     12345689999999766655678899999999999999999999997432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhh------------hhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVD------------ANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .  ......+.........+.+.            .................++.+.+++.+||..||.+|||++++++
T Consensus       231 ~--~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~  307 (367)
T 1cm8_A          231 H--LDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA  307 (367)
T ss_dssp             H--HHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             H--HHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence            1  11111111111111111111            10000011111122345667999999999999999999999987

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.90  E-value=4e-24  Score=148.15  Aligned_cols=143  Identities=32%  Similarity=0.495  Sum_probs=96.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||+++.+.... ........|++.|+|||.+ ....++.++||||+|+++|++++|..||....
T Consensus       162 p~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  239 (326)
T 3uim_A          162 AANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAFDLAR  239 (326)
T ss_dssp             GGGEEECTTCCEEECCCSSCEECCSSS-SCEECCCCSCGGGCCHHHH-HHSEECHHHHHHHHHHHHHHHHHCCCSBCHHH
T ss_pred             hhhEEECCCCCEEeccCccccccCccc-ccccccccCCcCccCHHHh-ccCCCCccccchhHHHHHHHHHhCCCcccccc
Confidence            689999999999999999998753221 2223344589999999544 45568889999999999999999999996321


Q ss_pred             ---cCchhHHHHHHHhhhhh-hHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHH
Q 039452           81 ---SGEMTLKRWINDLLSVS-VMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSK  151 (164)
Q Consensus        81 ---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~  151 (164)
                         ........+........ .....+      .......+...+..+.+++.+||+.||.+|||+++|++.|+.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~  308 (326)
T 3uim_A          240 LANDDDVMLLDWVKGLLKEKKLEALVD------VDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG  308 (326)
T ss_dssp             HTTTSCSBHHHHHTTTTSSCCSTTSSC------TTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred             cccccchhHHHHHHHHhhchhhhhhcC------hhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence               11111222211111110 011111      111112234556779999999999999999999999999974

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.90  E-value=4.5e-24  Score=154.13  Aligned_cols=72  Identities=24%  Similarity=0.331  Sum_probs=54.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc-------------------------cccccccccccccCchhhhccCcccC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS-------------------------MTQTQTLATIGYMAPVEYGREGRVST   55 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~pe~~~~~~~~~~   55 (164)
                      |+|||++.++.+||+|||+++.+......                         ......+||+.|+|||.+.....++.
T Consensus       184 p~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~  263 (458)
T 3rp9_A          184 PANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTE  263 (458)
T ss_dssp             GGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCT
T ss_pred             hhhEEECCCCCEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCc
Confidence            78999999999999999999875311110                         11234567999999976666677899


Q ss_pred             ccchHhHHHHHHHHHhc
Q 039452           56 NGDVYSFGIMLMEAFTR   72 (164)
Q Consensus        56 ~~Di~s~g~~~~~~~~g   72 (164)
                      ++||||+||++|+|++|
T Consensus       264 ~~DiwSlG~il~elltg  280 (458)
T 3rp9_A          264 AIDVWSIGCIFAELLNM  280 (458)
T ss_dssp             HHHHHHHHHHHHHHHTT
T ss_pred             HhHHHHHHHHHHHHHHh
Confidence            99999999999999983

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.90  E-value=5.5e-24  Score=148.66  Aligned_cols=143  Identities=14%  Similarity=0.120  Sum_probs=96.0

Q ss_pred             CcceEecCCc--eEEEeccccceeccCCCCc-----cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcC
Q 039452            1 PSNVLLDDNM--VAHLSDFGIAKLLIGEDQS-----MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRK   73 (164)
Q Consensus         1 p~Nill~~~~--~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~   73 (164)
                      |+|||++.++  .+||+|||+++.+......     .......|+..|+|||. .....++.++||||+|+++|++++|.
T Consensus       179 p~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Di~slG~il~ell~g~  257 (345)
T 2v62_A          179 AANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDA-HKGVALSRRSDVEILGYCMLRWLCGK  257 (345)
T ss_dssp             GGGEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHH-HHTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred             HHHEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHH-hcCCCCCchhhHHHHHHHHHHHHhCC
Confidence            6899998877  9999999999876321111     11134568999999954 44566889999999999999999999


Q ss_pred             CCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHH
Q 039452           74 KPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIR  153 (164)
Q Consensus        74 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~  153 (164)
                      .||.................. ......+...         .....++..+.+++..||+.||++|||+.+|++.|+++.
T Consensus       258 ~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~  327 (345)
T 2v62_A          258 LPWEQNLKDPVAVQTAKTNLL-DELPQSVLKW---------APSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG  327 (345)
T ss_dssp             CTTGGGTTCHHHHHHHHHHHH-HTTTHHHHHH---------SCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred             CCccccccccHHHHHHHHhhc-ccccHHHHhh---------ccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence            999643222222111111110 0000000000         001134566999999999999999999999999998765


Q ss_pred             H
Q 039452          154 D  154 (164)
Q Consensus       154 ~  154 (164)
                      -
T Consensus       328 ~  328 (345)
T 2v62_A          328 I  328 (345)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.90  E-value=2.5e-24  Score=148.86  Aligned_cols=151  Identities=19%  Similarity=0.313  Sum_probs=99.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc-cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS-MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||.+......... .......++..|+|||.+ ....++.++|+||+|+++|++++|..||...
T Consensus       162 p~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~ll~g~~p~~~~  240 (318)
T 3lxp_A          162 ARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL-KEYKFYYASDVWSFGVTLYELLTHCDSSQSP  240 (318)
T ss_dssp             GGGEEECTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHH-HHCEEEHHHHHHHHHHHHHHHHTTTCGGGSH
T ss_pred             hheEEEcCCCCEEECCccccccccccccccccccCCCCCceeeChHHh-cCCCCCcHHHHHHHHHHHHHHHhCCCccccc
Confidence            68999999999999999999876322221 122334577889999544 5566788999999999999999999998642


Q ss_pred             ccCchhHHHHH-HHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhhc
Q 039452           80 FSGEMTLKRWI-NDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFR  158 (164)
Q Consensus        80 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~~  158 (164)
                      .........+. ...........+....      ....+..++..+.+++.+||+.||.+|||++++++.|+.+.+++..
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~  314 (318)
T 3lxp_A          241 PTKFLELIGIAQGQMTVLRLTELLERGE------RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQG  314 (318)
T ss_dssp             HHHHHHHHCSCCHHHHHHHHHHHHHTTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC
T ss_pred             chhhhhhhcccccchhHHHHHHHHhccc------CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhcc
Confidence            11100000000 0000001111111111      1112234566799999999999999999999999999999988864

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.90  E-value=7.9e-24  Score=150.28  Aligned_cols=142  Identities=23%  Similarity=0.218  Sum_probs=93.9

Q ss_pred             CcceEec-CCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLD-DNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~-~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+|||++ .++.+||+|||+++.+....   ......+++.|+|||.+.....++.++||||+||++|+|++|..||...
T Consensus       169 p~Nill~~~~~~~kL~DFG~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~  245 (394)
T 4e7w_A          169 PQNLLLDPPSGVLKLIDFGSAKILIAGE---PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGE  245 (394)
T ss_dssp             GGGEEEETTTTEEEECCCTTCEECCTTC---CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             HHHEEEcCCCCcEEEeeCCCcccccCCC---CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            6899999 79999999999998753222   2234568999999976665556889999999999999999999999753


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhh---hc-----c--cccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDA---NL-----L--TREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----~--~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ... ..+...+.. ......+.+..   ..     .  .........+..+++.+.+++.+||..||.+|||+.++++
T Consensus       246 ~~~-~~l~~i~~~-~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  321 (394)
T 4e7w_A          246 SGI-DQLVEIIKV-LGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC  321 (394)
T ss_dssp             SHH-HHHHHHHHH-HCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             CHH-HHHHHHHHH-hCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence            221 112211111 11111111100   00     0  0001111112235677999999999999999999999986

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.90  E-value=5.9e-24  Score=152.83  Aligned_cols=127  Identities=22%  Similarity=0.260  Sum_probs=89.8

Q ss_pred             CcceEec---CCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCC
Q 039452            1 PSNVLLD---DNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         1 p~Nill~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      |+|||++   .++.+||+|||++.....  .........|++.|+|||. .....++.++||||+||++|+|++|..||.
T Consensus       138 p~NIll~~~~~~~~vkL~DFG~a~~~~~--~~~~~~~~~gt~~Y~APE~-l~~~~~~~~~DIwSlGvilyell~G~~Pf~  214 (444)
T 3soa_A          138 PENLLLASKLKGAAVKLADFGLAIEVEG--EQQAWFGFAGTPGYLSPEV-LRKDPYGKPVDLWACGVILYILLVGYPPFW  214 (444)
T ss_dssp             STTEEESBSSTTCCEEECCCSSCBCCCT--TCCBCCCSCSCGGGCCHHH-HTTCCBCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             HHHEEEeccCCCCcEEEccCceeEEecC--CCceeecccCCcccCCHHH-hcCCCCCCccccHHHHHHHHHHHhCCCCCC
Confidence            7899998   468899999999977532  2222334578999999954 455668899999999999999999999996


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ....  ....            ..+...   ...........+++.+.+++.+||+.||.+|||+.++++
T Consensus       215 ~~~~--~~~~------------~~i~~~---~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~  267 (444)
T 3soa_A          215 DEDQ--HRLY------------QQIKAG---AYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALK  267 (444)
T ss_dssp             CSSH--HHHH------------HHHHHT---CCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CccH--HHHH------------HHHHhC---CCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            4211  1111            111111   111111122345667899999999999999999999986

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.90  E-value=4.1e-24  Score=154.51  Aligned_cols=141  Identities=19%  Similarity=0.174  Sum_probs=87.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||+++....   ........||+.|+|||.+ .+..++.++||||+||++|+|++|..||.+..
T Consensus       192 p~NIll~~~~~~kl~DFG~a~~~~~---~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~  267 (464)
T 3ttj_A          192 PSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVI-LGMGYKENVDIWSVGCIMGEMVRHKILFPGRD  267 (464)
T ss_dssp             GGGEEECTTSCEEECCCCCC--------CCCC----CCCTTCCHHHH-TTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             hHhEEEeCCCCEEEEEEEeeeecCC---CcccCCCcccccccCHHHH-cCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999987521   2223456789999999555 45578899999999999999999999997532


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhh-------cc-----ccc-----------chhhhhHHHHHHHHHHHHhhccccCcc
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDAN-------LL-----TRE-----------DRHFAAKQQCVSFVFNLAMECTIESPE  137 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~-----~~~-----------~~~~~~~~~~~~~~~~l~~~cl~~~p~  137 (164)
                      .. ..+...+ ........+.....       ..     ...           ..........++.+.+|+.+||..||+
T Consensus       268 ~~-~~~~~i~-~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~  345 (464)
T 3ttj_A          268 YI-DQWNKVI-EQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA  345 (464)
T ss_dssp             HH-HHHHHHH-HHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTT
T ss_pred             HH-HHHHHHH-HhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChh
Confidence            11 1111111 11111111111100       00     000           000111123367789999999999999


Q ss_pred             CCCCHHHHHH
Q 039452          138 RRINAKEIVT  147 (164)
Q Consensus       138 ~Rps~~~vl~  147 (164)
                      +|||++++++
T Consensus       346 ~R~ta~e~L~  355 (464)
T 3ttj_A          346 KRISVDDALQ  355 (464)
T ss_dssp             TSCCHHHHHT
T ss_pred             hCCCHHHHhc
Confidence            9999999986

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.90  E-value=5.9e-24  Score=149.64  Aligned_cols=140  Identities=18%  Similarity=0.188  Sum_probs=84.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||+++....     ......++..|+|||.+.....++.++||||+||++|+|++|..||....
T Consensus       160 p~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  234 (367)
T 2fst_X          160 PSNLAVNEDCELKILDFGLARHTAD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD  234 (367)
T ss_dssp             GGGEEECTTCCEEECC--------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             HhhEEECCCCCEEEeeccccccccc-----cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999976421     12345789999999766655678899999999999999999999997532


Q ss_pred             cCchhHHHHHHHhhhhhhHH------------HhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVME------------VVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .  ......+.........+            .++.................++.+.+++.+||..||.+|||++++++
T Consensus       235 ~--~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~  311 (367)
T 2fst_X          235 H--IDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  311 (367)
T ss_dssp             H--HHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             H--HHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence            1  11111111111111111            11111100111111112234667899999999999999999999986

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.90  E-value=9.7e-24  Score=147.97  Aligned_cols=142  Identities=20%  Similarity=0.199  Sum_probs=92.8

Q ss_pred             CcceEecC-CceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDD-NMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+|||++. ++.+||+|||+++.+...   .......+++.|+|||.+.....++.++||||+||++|++++|..||...
T Consensus       159 p~NIll~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~  235 (360)
T 3e3p_A          159 PHNVLVNEADGTLKLCDFGSAKKLSPS---EPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGD  235 (360)
T ss_dssp             GGGEEEETTTTEEEECCCTTCBCCCTT---SCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             HHHEEEeCCCCcEEEeeCCCceecCCC---CCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCC
Confidence            68999996 899999999999875321   12234568999999976655556889999999999999999999999753


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccc--------cchh-----hhhHHHHHHHHHHHHhhccccCccCCCCHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTR--------EDRH-----FAAKQQCVSFVFNLAMECTIESPERRINAKEIV  146 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~-----~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl  146 (164)
                      .... ...... ........+.+.......        ....     .......+..+.+++.+||+.||.+|||+.+++
T Consensus       236 ~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l  313 (360)
T 3e3p_A          236 NSAG-QLHEIV-RVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEAL  313 (360)
T ss_dssp             SHHH-HHHHHH-HHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred             ChHH-HHHHHH-HHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHh
Confidence            2211 111111 111111111111110000        0000     001112466799999999999999999999998


Q ss_pred             H
Q 039452          147 T  147 (164)
Q Consensus       147 ~  147 (164)
                      +
T Consensus       314 ~  314 (360)
T 3e3p_A          314 C  314 (360)
T ss_dssp             T
T ss_pred             c
Confidence            6

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.90  E-value=1.3e-23  Score=147.74  Aligned_cols=145  Identities=20%  Similarity=0.207  Sum_probs=95.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc-cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS-MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+|||++.++.+||+|||.++........ .......|++.|+|||.+.....++.++|+||+||++|++++|..||...
T Consensus       156 p~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~  235 (364)
T 3qyz_A          156 PSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK  235 (364)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             hHhEEECCCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCC
Confidence            68999999999999999999875322111 11234578999999977666666889999999999999999999999753


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhh------------hhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVD------------ANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ..... ... +.........+.+.            ................++..+.+++.+||+.||++|||++++++
T Consensus       236 ~~~~~-~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  313 (364)
T 3qyz_A          236 HYLDQ-LNH-ILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA  313 (364)
T ss_dssp             SGGGH-HHH-HHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ChHHH-HHH-HHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            32221 111 11111111111110            00000111111122345667899999999999999999999986

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.90  E-value=9.5e-25  Score=153.68  Aligned_cols=135  Identities=23%  Similarity=0.377  Sum_probs=95.6

Q ss_pred             CcceEecCCc---eEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCC
Q 039452            1 PSNVLLDDNM---VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPT   76 (164)
Q Consensus         1 p~Nill~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~   76 (164)
                      |+|||++.++   .+||+|||+++.+.............+++.|+|||.+ ....++.++||||+||++|++++ |..||
T Consensus       209 p~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~-~~~~~~~~~DvwslG~il~ellt~g~~pf  287 (367)
T 3l9p_A          209 ARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAF-MEGIFTSKTDTWSFGVLLWEIFSLGYMPY  287 (367)
T ss_dssp             GGGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred             hhhEEEecCCCCceEEECCCccccccccccccccCCCcCCcccEECHHHh-cCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            6899998544   5999999999765322222333445678899999554 45568889999999999999998 99998


Q ss_pred             CccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHh
Q 039452           77 DEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL  156 (164)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~  156 (164)
                      ......  ..            ...+.....      ...+..++..+.+++.+||+.||.+|||++++++.|..+.+..
T Consensus       288 ~~~~~~--~~------------~~~i~~~~~------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~  347 (367)
T 3l9p_A          288 PSKSNQ--EV------------LEFVTSGGR------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP  347 (367)
T ss_dssp             TTCCHH--HH------------HHHHHTTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred             CCCCHH--HH------------HHHHHcCCC------CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence            643211  11            111111110      1112344556889999999999999999999999999887654

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.90  E-value=5.7e-24  Score=147.28  Aligned_cols=126  Identities=17%  Similarity=0.225  Sum_probs=90.5

Q ss_pred             CcceEecC--CceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDD--NMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+|||++.  ++.+||+|||+++.+..   ........+++.|+|||. .....++.++|+||+|+++|++++|..||..
T Consensus       130 p~NIl~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~gt~~y~aPE~-~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  205 (321)
T 1tki_A          130 PENIIYQTRRSSTIKIIEFGQARQLKP---GDNFRLLFTAPEYYAPEV-HQHDVVSTATDMWSLGTLVYVLLSGINPFLA  205 (321)
T ss_dssp             GGGEEESSSSCCCEEECCCTTCEECCT---TCEEEEEESCGGGSCHHH-HTTCEECHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             HHHEEEccCCCCCEEEEECCCCeECCC---CCccccccCChhhcCcHH-hcCCCCCchhhHHHHHHHHHHHHhCCCCCcC
Confidence            78999986  78999999999987632   122334568999999954 4455678899999999999999999999964


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .....  ..           ..+...    ...........++..+.+++.+||..||.+|||+.++++
T Consensus       206 ~~~~~--~~-----------~~i~~~----~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~  257 (321)
T 1tki_A          206 ETNQQ--II-----------ENIMNA----EYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             SSHHH--HH-----------HHHHHT----CCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CCHHH--HH-----------HHHHcC----CCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            32111  00           011111    111112223345667899999999999999999999987

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.90  E-value=6.8e-24  Score=146.06  Aligned_cols=143  Identities=20%  Similarity=0.247  Sum_probs=88.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||.+..+..  .........++..|+|||.+.....++.++|+||+|+++|++++|..||....
T Consensus       130 p~Nil~~~~~~~kl~Dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  207 (311)
T 4agu_A          130 PENILITKHSVIKLCDFGFARLLTG--PSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKS  207 (311)
T ss_dssp             GGGEEECTTSCEEECCCTTCEECC--------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             hhhEEEcCCCCEEEeeCCCchhccC--cccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999987532  12223345688999999776655678899999999999999999999997532


Q ss_pred             cCchhHHHHHHHhhhhhhH---HHhhhh------cccc---cchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVM---EVVDAN------LLTR---EDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~---~~~~~~------~~~~---~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ....  ...+.........   ......      ....   ..........++..+.+++.+||+.||.+|||++++++
T Consensus       208 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  284 (311)
T 4agu_A          208 DVDQ--LYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH  284 (311)
T ss_dssp             HHHH--HHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred             HHHH--HHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence            2211  1111111111000   000000      0000   00011111345667899999999999999999999986

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.90  E-value=2.6e-24  Score=160.11  Aligned_cols=138  Identities=24%  Similarity=0.361  Sum_probs=96.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCC-ccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQ-SMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~   78 (164)
                      |+|||++.++.+||+|||+++.+..... ........++..|+|||.+ ....++.++|||||||++|+|++ |..||..
T Consensus       464 p~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~-~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~  542 (613)
T 2ozo_A          464 ARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI-NFRKFSSRSDVWSYGVTMWEALSYGQKPYKK  542 (613)
T ss_dssp             GGGEEEEETTEEEECCCSTTTTCC--------------CCTTSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             HHHEEEcCCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhh-cCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence            6899999999999999999986532111 1112223456789999554 55678899999999999999998 9999975


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhhc
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFR  158 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~~  158 (164)
                      .....  ..            ..+....      ....+..++..+.+++.+||+.||++|||+++|++.|+.+...+..
T Consensus       543 ~~~~~--~~------------~~i~~~~------~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~  602 (613)
T 2ozo_A          543 MKGPE--VM------------AFIEQGK------RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS  602 (613)
T ss_dssp             CCSHH--HH------------HHHHTTC------CCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSC
T ss_pred             CCHHH--HH------------HHHHcCC------CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhcc
Confidence            42211  11            1111111      1112334667799999999999999999999999999999888765


Q ss_pred             c
Q 039452          159 N  159 (164)
Q Consensus       159 ~  159 (164)
                      .
T Consensus       603 ~  603 (613)
T 2ozo_A          603 K  603 (613)
T ss_dssp             S
T ss_pred             c
Confidence            4

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.90  E-value=5.7e-24  Score=147.27  Aligned_cols=126  Identities=18%  Similarity=0.270  Sum_probs=89.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||++..+..  .........|++.|+|||. .....++.++|+||+|+++|++++|..||....
T Consensus       169 p~NIll~~~~~~kl~Dfg~~~~~~~--~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~  245 (321)
T 2c30_A          169 SDSILLTLDGRVKLSDFGFCAQISK--DVPKRKSLVGTPYWMAPEV-ISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDS  245 (321)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECCS--SSCCBCCCCSCGGGCCHHH-HTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred             HHHEEECCCCcEEEeeeeeeeeccc--CccccccccCCccccCHhh-hcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999887532  1122334578999999954 455668889999999999999999999996432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .  .....           . +....    .........++..+.+++.+||+.||.+|||++++++
T Consensus       246 ~--~~~~~-----------~-~~~~~----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  294 (321)
T 2c30_A          246 P--VQAMK-----------R-LRDSP----PPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLD  294 (321)
T ss_dssp             H--HHHHH-----------H-HHHSS----CCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             H--HHHHH-----------H-HhcCC----CCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            1  11100           0 00000    0011112334566889999999999999999999987

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.90  E-value=3e-24  Score=149.31  Aligned_cols=136  Identities=24%  Similarity=0.396  Sum_probs=97.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||+++...............++..|+|||.+ ....++.++|+||+|+++|++++ |..||...
T Consensus       185 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~ellt~g~~p~~~~  263 (334)
T 2pvf_A          185 ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL-FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI  263 (334)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHH-HHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             cceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHh-cCCCcChHHHHHHHHHHHHHHHhCCCCCcCcC
Confidence            68999999999999999999876332222223334567889999554 45668889999999999999999 99998643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhh
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLF  157 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~  157 (164)
                      ....  ..            ..+.....      ...+..++..+.+++.+||+.||.+|||+.++++.|+.+.....
T Consensus       264 ~~~~--~~------------~~~~~~~~------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~  321 (334)
T 2pvf_A          264 PVEE--LF------------KLLKEGHR------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT  321 (334)
T ss_dssp             CHHH--HH------------HHHHHTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred             CHHH--HH------------HHHhcCCC------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccc
Confidence            2111  10            11111110      01123345668999999999999999999999999999987654

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.90  E-value=9.4e-25  Score=157.47  Aligned_cols=137  Identities=26%  Similarity=0.421  Sum_probs=93.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+|||++.++.+||+|||+++...... ........++..|+|||.+ ....++.++||||||+++|++++ |..||...
T Consensus       308 p~Nill~~~~~~kl~DfG~a~~~~~~~-~~~~~~~~~~~~y~aPE~~-~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~  385 (452)
T 1fmk_A          308 AANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAA-LYGRFTIKSDVWSFGILLTELTTKGRVPYPGM  385 (452)
T ss_dssp             GGGEEECGGGCEEECCCCTTC---------------CCGGGSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred             hhhEEECCCCCEEECCCccceecCCCc-eecccCCcccccccCHhHH-hcCCCCccccHHhHHHHHHHHHhCCCCCCCCC
Confidence            689999999999999999998753211 1122234467889999554 45568899999999999999999 89998643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhhcc
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRN  159 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~~~  159 (164)
                      ....  ..            ..+....      ....+..++..+.+++.+||+.||++|||++++++.|+.+.......
T Consensus       386 ~~~~--~~------------~~i~~~~------~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~~  445 (452)
T 1fmk_A          386 VNRE--VL------------DQVERGY------RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ  445 (452)
T ss_dssp             CHHH--HH------------HHHHTTC------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCCC
T ss_pred             CHHH--HH------------HHHHcCC------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCcc
Confidence            2111  00            1111110      11123345667899999999999999999999999999887655443

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.90  E-value=5.1e-24  Score=145.19  Aligned_cols=130  Identities=25%  Similarity=0.423  Sum_probs=93.0

Q ss_pred             CcceEecCCce-----EEEeccccceeccCCCCccccccccccccccCchhhh-ccCcccCccchHhHHHHHHHHHhcCC
Q 039452            1 PSNVLLDDNMV-----AHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYG-REGRVSTNGDVYSFGIMLMEAFTRKK   74 (164)
Q Consensus         1 p~Nill~~~~~-----~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~-~~~~~~~~~Di~s~g~~~~~~~~g~~   74 (164)
                      |+||+++.++.     +||+|||+++...     .......+++.|+|||.+. ....++.++|+||+|+++|++++|..
T Consensus       152 p~Nil~~~~~~~~~~~~kl~Dfg~~~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~  226 (287)
T 4f0f_A          152 SPNIFLQSLDENAPVCAKVADFGLSQQSV-----HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEG  226 (287)
T ss_dssp             GGGEEESCCCTTCSCCEEECCCTTCBCCS-----SCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSC
T ss_pred             cceEEEeccCCCCceeEEeCCCCcccccc-----ccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCC
Confidence            68999987765     9999999987531     1233456899999996553 34457789999999999999999999


Q ss_pred             CCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHH
Q 039452           75 PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI  152 (164)
Q Consensus        75 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~  152 (164)
                      ||...............           ...      .....+..+++.+.+++.+||+.||.+|||++++++.|+++
T Consensus       227 pf~~~~~~~~~~~~~~~-----------~~~------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          227 PFDEYSYGKIKFINMIR-----------EEG------LRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             TTTTCCCCHHHHHHHHH-----------HSC------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             CCccccccHHHHHHHHh-----------ccC------CCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence            99754333321111110           000      01112234566689999999999999999999999998764

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.90  E-value=7.1e-24  Score=145.97  Aligned_cols=139  Identities=17%  Similarity=0.271  Sum_probs=88.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||++.....  .........++..|++||.+ ....++.++|+||+|+++|++++|..||....
T Consensus       164 p~NIl~~~~~~~kl~Dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~  240 (310)
T 2wqm_A          164 PANVFITATGVVKLGDLGLGRFFSS--KTTAAHSLVGTPYYMSPERI-HENGYNFKSDIWSLGCLLYEMAALQSPFYGDK  240 (310)
T ss_dssp             GGGEEECTTSCEEECCC--------------------CCSSCCHHHH-TTCCCCHHHHHHHHHHHHHHHHHSSCTTC---
T ss_pred             HHHEEEcCCCCEEEEeccceeeecC--CCccccccCCCeeEeChHHh-CCCCCCchhhHHHHHHHHHHHHhCCCCCcccc
Confidence            6899999999999999999876522  11122334688999999544 45668889999999999999999999986432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhhcc
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRN  159 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~~~  159 (164)
                      ........            .+.......     .....++..+.+++.+||+.||.+|||+.++++.|.++.+.....
T Consensus       241 ~~~~~~~~------------~~~~~~~~~-----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~  302 (310)
T 2wqm_A          241 MNLYSLCK------------KIEQCDYPP-----LPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASS  302 (310)
T ss_dssp             CCHHHHHH------------HHHTTCSCC-----CCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC--
T ss_pred             hhHHHHHH------------HhhcccCCC-----CcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhh
Confidence            22111111            011110000     011234556899999999999999999999999999999876554

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.90  E-value=3.9e-24  Score=145.42  Aligned_cols=134  Identities=22%  Similarity=0.352  Sum_probs=93.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||.+....... ........++..|+|||.+ ....++.++|+||+|+++|++++ |..||...
T Consensus       141 p~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~llt~g~~p~~~~  218 (281)
T 3cc6_A          141 VRNILVASPECVKLGDFGLSRYIEDED-YYKASVTRLPIKWMSPESI-NFRRFTTASDVWMFAVCMWEILSFGKQPFFWL  218 (281)
T ss_dssp             GGGEEEEETTEEEECCCCGGGCC----------CCCCCGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred             cceEEECCCCcEEeCccCCCccccccc-ccccccCCCCcceeCchhh-ccCCCCchhccHHHHHHHHHHHhCCCCCcccC
Confidence            689999999999999999987652211 1122334567889999554 45667889999999999999998 99998643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHh
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL  156 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~  156 (164)
                      .....  ..            .+.....      ...+..+++.+.+++.+||+.||++|||+.++++.|.++.+..
T Consensus       219 ~~~~~--~~------------~~~~~~~------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~  275 (281)
T 3cc6_A          219 ENKDV--IG------------VLEKGDR------LPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME  275 (281)
T ss_dssp             CGGGH--HH------------HHHHTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             ChHHH--HH------------HHhcCCC------CCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhh
Confidence            22211  11            1111100      0112234566899999999999999999999999999988654

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.90  E-value=1.9e-24  Score=145.95  Aligned_cols=133  Identities=22%  Similarity=0.434  Sum_probs=93.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.++|+|||.+....... ........++..|+|||. .....++.++|+||+|+++|++++ |..||...
T Consensus       132 p~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~  209 (268)
T 3sxs_A          132 ARNCLVDRDLCVKVSDFGMTRYVLDDQ-YVSSVGTKFPVKWSAPEV-FHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLY  209 (268)
T ss_dssp             GGGEEECTTCCEEECCTTCEEECCTTC-EEECCSCCCCGGGCCHHH-HHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred             cceEEECCCCCEEEccCccceecchhh-hhcccCCCcCcccCCHHH-HhccCCchhhhhHHHHHHHHHHHcCCCCCcccc
Confidence            689999999999999999998753221 122223445678999954 456668899999999999999998 99998643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDS  155 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~  155 (164)
                      .....  .           .. +.....      ...+..+++.+.+++.+||+.||++|||++++++.|+.+.++
T Consensus       210 ~~~~~--~-----------~~-~~~~~~------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~  265 (268)
T 3sxs_A          210 TNSEV--V-----------LK-VSQGHR------LYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK  265 (268)
T ss_dssp             CHHHH--H-----------HH-HHTTCC------CCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred             ChHHH--H-----------HH-HHcCCC------CCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence            21110  0           00 000000      001122345688999999999999999999999999988654

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.90  E-value=5e-24  Score=146.63  Aligned_cols=141  Identities=21%  Similarity=0.273  Sum_probs=91.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||+++.+.   .........+++.|+|||.+ ....++.++||||+||++|++++|..||....
T Consensus       148 p~Nil~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~  223 (308)
T 3g33_A          148 PENILVTSGGTVKLADFGLARIYS---YQMALTPVVVTLWYRAPEVL-LQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS  223 (308)
T ss_dssp             TTTEEECTTSCEEECSCSCTTTST---TCCCSGGGGCCCSSCCHHHH-HTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSS
T ss_pred             HHHEEEcCCCCEEEeeCccccccC---CCcccCCccccccccCchHH-cCCCCCchHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            789999999999999999997652   12223446789999999554 45568899999999999999999999997532


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhh------hccc--ccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDA------NLLT--REDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~--~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ... ....... ............      ....  ...........++..+.+++.+||+.||++|||+.++++
T Consensus       224 ~~~-~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  296 (308)
T 3g33_A          224 EAD-QLGKIFD-LIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ  296 (308)
T ss_dssp             HHH-HHHHHHH-HHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHH-HHHHHHH-HhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence            211 1111111 100000000000      0000  000111122345667899999999999999999999986

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.90  E-value=1e-24  Score=157.41  Aligned_cols=134  Identities=25%  Similarity=0.454  Sum_probs=95.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+|||++.++.+||+|||+++..... .........++..|+|||.+ ....++.++||||||+++|++++ |..||...
T Consensus       312 p~Nill~~~~~~kl~DFG~a~~~~~~-~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~  389 (454)
T 1qcf_A          312 AANILVSASLVCKIADFGLARVIEDN-EYTAREGAKFPIKWTAPEAI-NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM  389 (454)
T ss_dssp             GGGEEECTTCCEEECSTTGGGGBCCH-HHHTTCSSSSCGGGSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             HHHEEECCCCcEEEeeCCCceEcCCC-ceeccCCCcccccccCHHHh-ccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCC
Confidence            68999999999999999999865211 11112233457789999554 55668899999999999999999 99999753


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHh
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL  156 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~  156 (164)
                      ....  ..            ..+....      ....+..++..+.+++.+||+.||++|||+++|++.|+.+....
T Consensus       390 ~~~~--~~------------~~i~~~~------~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~  446 (454)
T 1qcf_A          390 SNPE--VI------------RALERGY------RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT  446 (454)
T ss_dssp             CHHH--HH------------HHHHHTC------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred             CHHH--HH------------HHHHcCC------CCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence            2111  10            1111111      11123345667999999999999999999999999998876543

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.90  E-value=2.2e-23  Score=151.21  Aligned_cols=143  Identities=15%  Similarity=0.087  Sum_probs=100.7

Q ss_pred             CcceEe---cCCceEEEeccccceeccCCCCc-----cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhc
Q 039452            1 PSNVLL---DDNMVAHLSDFGIAKLLIGEDQS-----MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTR   72 (164)
Q Consensus         1 p~Nill---~~~~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g   72 (164)
                      |+||||   +.++.+||+|||+++.+......     .......|+..|++|| +.....++.++|||||||++|+|++|
T Consensus       131 P~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE-~~~~~~~s~~sDvwSlGvil~elltG  209 (483)
T 3sv0_A          131 PDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVN-THLGIEQSRRDDLESLGYVLMYFLRG  209 (483)
T ss_dssp             GGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHH-HHTTCCCCHHHHHHHHHHHHHHHHHS
T ss_pred             cceEEEecCCCCCeEEEEeCCcceeccCCccccccccccccccCCCccccCHH-HhcCCCCChHHHHHHHHHHHHHHHhC
Confidence            689999   58899999999999876432221     1122457899999995 44566688899999999999999999


Q ss_pred             CCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHH
Q 039452           73 KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI  152 (164)
Q Consensus        73 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~  152 (164)
                      ..||...........  ...        +.....   ..........++.++.+++..||+.+|++||++.+|++.|+.+
T Consensus       210 ~~Pf~~~~~~~~~~~--~~~--------i~~~~~---~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l  276 (483)
T 3sv0_A          210 SLPWQGLKAGTKKQK--YEK--------ISEKKV---ATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL  276 (483)
T ss_dssp             SCTTSSCCCSSHHHH--HHH--------HHHHHH---HSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             CCCCccccchhHHHH--HHH--------Hhhccc---cccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            999986543321110  000        000000   0011112234456799999999999999999999999999999


Q ss_pred             HHHhh
Q 039452          153 RDSLF  157 (164)
Q Consensus       153 ~~~~~  157 (164)
                      .....
T Consensus       277 ~~~~~  281 (483)
T 3sv0_A          277 FIREG  281 (483)
T ss_dssp             HHHTT
T ss_pred             HHHcC
Confidence            87654

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.90  E-value=2.4e-24  Score=146.96  Aligned_cols=144  Identities=19%  Similarity=0.180  Sum_probs=88.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||+++.+..  .........+++.|+|||.+.....++.++|+||+||++|++++|..||....
T Consensus       128 p~Nil~~~~~~~kl~Dfg~~~~~~~--~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~  205 (288)
T 1ob3_A          128 PQNLLINREGELKIADFGLARAFGI--PVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS  205 (288)
T ss_dssp             GGGEEECTTSCEEECCTTHHHHHCC-----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             HHHEEEcCCCCEEEeECccccccCc--cccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999876521  11222345689999999766655568899999999999999999999997532


Q ss_pred             cCchhHHHHHHHhhhh---hhHHHhhhhcc-----c-ccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSV---SVMEVVDANLL-----T-REDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ... ............   ...........     . ...........++..+.+++.+||+.||++|||++++++
T Consensus       206 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          206 EAD-QLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (288)
T ss_dssp             HHH-HHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHH-HHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            211 111111100000   00000000000     0 000000111235667899999999999999999999886

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.90  E-value=6.8e-24  Score=145.16  Aligned_cols=138  Identities=21%  Similarity=0.379  Sum_probs=96.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCC--ccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQ--SMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+||+++.++.+||+|||+++.+.....  ........++..|++|| ......++.++|+||+|+++|++++|..|+..
T Consensus       152 p~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~  230 (298)
T 3pls_A          152 ARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALE-SLQTYRFTTKSDVWSFGVLLWELLTRGAPPYR  230 (298)
T ss_dssp             GGGEEECTTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHH-HHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTT
T ss_pred             cceEEEcCCCcEEeCcCCCcccccCCcccccccCcCCCCCccccChh-hhccCCCChhhchhhHHHHHHHHhhCCCCCCc
Confidence            6899999999999999999976532111  11223345788999995 44566688899999999999999996655432


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhhc
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFR  158 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~~  158 (164)
                      ..... ...            ..+.....      ...+..++..+.+++.+||+.||.+|||++++++.|+++.+.+..
T Consensus       231 ~~~~~-~~~------------~~~~~~~~------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~  291 (298)
T 3pls_A          231 HIDPF-DLT------------HFLAQGRR------LPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLG  291 (298)
T ss_dssp             TSCGG-GHH------------HHHHTTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCS
T ss_pred             cCCHH-HHH------------HHhhcCCC------CCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhc
Confidence            21111 111            11111110      111223455689999999999999999999999999999988764

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.90  E-value=2.1e-23  Score=144.19  Aligned_cols=148  Identities=18%  Similarity=0.225  Sum_probs=97.8

Q ss_pred             CcceEe----cCCceEEEeccccceeccCCCCccccccccccccccCchhhhc-------cCcccCccchHhHHHHHHHH
Q 039452            1 PSNVLL----DDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGR-------EGRVSTNGDVYSFGIMLMEA   69 (164)
Q Consensus         1 p~Nill----~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-------~~~~~~~~Di~s~g~~~~~~   69 (164)
                      |+|||+    +.++.+||+|||+++.+....   ......++..|+|||.+..       ...++.++||||+||++|++
T Consensus       140 p~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el  216 (319)
T 4euu_A          140 PGNIMRVIGEDGQSVYKLTDFGAARELEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHA  216 (319)
T ss_dssp             GGGEEEEECTTSCEEEEECCCTTCEECCTTC---CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHH
T ss_pred             HHHEEEeccCCCCceEEEccCCCceecCCCC---ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHH
Confidence            689999    788899999999998763222   2234568999999966542       45688899999999999999


Q ss_pred             HhcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcc---------cccchhhhhHHHHHHHHHHHHhhccccCccCCC
Q 039452           70 FTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLL---------TREDRHFAAKQQCVSFVFNLAMECTIESPERRI  140 (164)
Q Consensus        70 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp  140 (164)
                      ++|..||......... ...+.......+.........         ............++..+.+++.+||+.||++||
T Consensus       217 ~~g~~pf~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~  295 (319)
T 4euu_A          217 ATGSLPFRPFEGPRRN-KEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCW  295 (319)
T ss_dssp             HHSSCSEECTTCGGGC-HHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSC
T ss_pred             HhCCCCCCCCCccchh-HHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhc
Confidence            9999999653322221 111111111111110000000         000111223356677899999999999999999


Q ss_pred             CHHHHHHHHHHH
Q 039452          141 NAKEIVTELSKI  152 (164)
Q Consensus       141 s~~~vl~~l~~~  152 (164)
                      |++++++...+.
T Consensus       296 s~~ell~h~~d~  307 (319)
T 4euu_A          296 GFDQFFAETSDI  307 (319)
T ss_dssp             CHHHHHHHHHHH
T ss_pred             cHHHhhhccHHH
Confidence            999999877653

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.90  E-value=6e-24  Score=145.55  Aligned_cols=137  Identities=20%  Similarity=0.410  Sum_probs=94.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc--cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS--MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTD   77 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~   77 (164)
                      |+||+++.++.+||+|||.++.+......  .......+++.|+|||.+ ....++.++|+||+|+++|++++ +..||.
T Consensus       156 p~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~~~~~~~~  234 (298)
T 3f66_A          156 ARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAPPYP  234 (298)
T ss_dssp             GGGEEECTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred             hheEEECCCCCEEECcccccccccccchhccccccCCCCCccccChHHh-cCCCCChHHHHHHHHHHHHHHHhCCCCCCc
Confidence            68999999999999999999865322211  122334567889999544 55668889999999999999999 555654


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhh
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLF  157 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~  157 (164)
                      .......  ...           .. ...      ....+..++..+.+++.+||+.||.+|||++++++.|..+.+.+.
T Consensus       235 ~~~~~~~--~~~-----------~~-~~~------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~  294 (298)
T 3f66_A          235 DVNTFDI--TVY-----------LL-QGR------RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI  294 (298)
T ss_dssp             TSCTTTH--HHH-----------HH-TTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred             cCCHHHH--HHH-----------Hh-cCC------CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence            3222111  100           00 000      001122345568999999999999999999999999999988765


Q ss_pred             c
Q 039452          158 R  158 (164)
Q Consensus       158 ~  158 (164)
                      .
T Consensus       295 ~  295 (298)
T 3f66_A          295 G  295 (298)
T ss_dssp             C
T ss_pred             c
Confidence            3

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.90  E-value=1.2e-23  Score=147.63  Aligned_cols=126  Identities=16%  Similarity=0.191  Sum_probs=89.9

Q ss_pred             CcceEecCCc----eEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCC
Q 039452            1 PSNVLLDDNM----VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPT   76 (164)
Q Consensus         1 p~Nill~~~~----~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~   76 (164)
                      |+|||++.++    .+||+|||++..+...   .......|++.|+|||. .....++.++|+||+|+++|+|++|..||
T Consensus       143 p~NIll~~~~~~~~~vkl~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~-~~~~~~~~~~DiwslGvil~~ll~g~~Pf  218 (361)
T 2yab_A          143 PENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPF  218 (361)
T ss_dssp             GGGEEESCTTSSSCCEEECCCSSCEECCTT---CCCCCCCSCGGGCCHHH-HTTCCCCTHHHHHHHHHHHHHHHHSCCSS
T ss_pred             HHHEEEeCCCCCccCEEEEecCCceEcCCC---CccccCCCCccEECchH-HcCCCCCccccHHHHHHHHHHHHhCCCCC
Confidence            7899998776    7999999999876321   12234568999999954 45566889999999999999999999999


Q ss_pred             CccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           77 DEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .....  ...               +.................++..+.+++.+||..||.+|||+.++++
T Consensus       219 ~~~~~--~~~---------------~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          219 LGDTK--QET---------------LANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             CCSSH--HHH---------------HHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CCCCH--HHH---------------HHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            64311  111               0111011111112223445667899999999999999999999985

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.90  E-value=9.1e-24  Score=144.58  Aligned_cols=137  Identities=22%  Similarity=0.356  Sum_probs=91.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||+++.+... .........|++.|+|||.+ ....++.++|+||+|+++|++++|..||....
T Consensus       139 p~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~  216 (294)
T 4eqm_A          139 PQNILIDSNKTLKIFDFGIAKALSET-SLTQTNHVLGTVQYFSPEQA-KGEATDECTDIYSIGIVLYEMLVGEPPFNGET  216 (294)
T ss_dssp             GGGEEECTTSCEEECCCSSSTTC--------------CCSSCCHHHH-HTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSC
T ss_pred             HHHEEECCCCCEEEEeCCCccccccc-cccccCccccCccccCHhHh-cCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence            68999999999999999998765211 11122345689999999554 45667889999999999999999999997532


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCC-CHHHHHHHHHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRI-NAKEIVTELSKIRDS  155 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-s~~~vl~~l~~~~~~  155 (164)
                      .....             ...+   ...........+..++..+.+++.+||+.||.+|| +++++.+.|..+.++
T Consensus       217 ~~~~~-------------~~~~---~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~  276 (294)
T 4eqm_A          217 AVSIA-------------IKHI---QDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHE  276 (294)
T ss_dssp             HHHHH-------------HHHH---SSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSS
T ss_pred             hHHHH-------------HHHh---hccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhh
Confidence            11100             0000   00111111222344567799999999999999999 889999888876544

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.90  E-value=8.4e-24  Score=145.57  Aligned_cols=133  Identities=26%  Similarity=0.316  Sum_probs=90.3

Q ss_pred             CcceEecCCce-EEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDDNMV-AHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~-~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+||+++.++. +||+|||++.....     ......|+..|+|||. .....++.++||||+|+++|++++|..||...
T Consensus       133 p~NIll~~~~~~~kl~Dfg~~~~~~~-----~~~~~~gt~~y~aPE~-~~~~~~~~~~Di~slG~il~el~~g~~p~~~~  206 (307)
T 2eva_A          133 PPNLLLVAGGTVLKICDFGTACDIQT-----HMTNNKGSAAWMAPEV-FEGSNYSEKCDVFSWGIILWEVITRRKPFDEI  206 (307)
T ss_dssp             GGGEEEETTTTEEEECCCCC-----------------CCTTSSCHHH-HTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTT
T ss_pred             hhHEEEeCCCCEEEEccccccccccc-----ccccCCCCCceEChhh-hCCCCCCcHHHHHHHHHHHHHHHHCCCCchhh
Confidence            68999988775 79999999876421     1223458999999954 45566889999999999999999999999753


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhh
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLF  157 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~  157 (164)
                      ..........            ......      ...+..++..+.+++.+||+.||.+|||++++++.|..+.+.+.
T Consensus       207 ~~~~~~~~~~------------~~~~~~------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~  266 (307)
T 2eva_A          207 GGPAFRIMWA------------VHNGTR------PPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFP  266 (307)
T ss_dssp             CSSHHHHHHH------------HHTTCC------CCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCC
T ss_pred             CccHHHHHHH------------HhcCCC------CCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhcc
Confidence            3222111100            000000      01122345568899999999999999999999999999986654

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.90  E-value=2.2e-24  Score=151.99  Aligned_cols=140  Identities=11%  Similarity=0.099  Sum_probs=94.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhc-cCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGR-EGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+|||++.++.+||+|||+++...   .  ......+++.|+|||.+.. ...++.++||||+||++|+|++|..||...
T Consensus       222 p~NIll~~~~~~kL~DFG~a~~~~---~--~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~  296 (371)
T 3q60_A          222 PDNLFIMPDGRLMLGDVSALWKVG---T--RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLV  296 (371)
T ss_dssp             GGGEEECTTSCEEECCGGGEEETT---C--EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBC
T ss_pred             HHHEEECCCCCEEEEecceeeecC---C--CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCc
Confidence            789999999999999999998651   1  1113456799999966542 145789999999999999999999999754


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH--HHHHHHHHhh
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT--ELSKIRDSLF  157 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~--~l~~~~~~~~  157 (164)
                      .......           ... ..................++..+.+++.+||+.||++|||+.++++  ++..+...+.
T Consensus       297 ~~~~~~~-----------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~~  364 (371)
T 3q60_A          297 TPGIKGS-----------WKR-PSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQNEIS  364 (371)
T ss_dssp             CTTCTTC-----------CCB-CCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHHHHHHH
T ss_pred             Ccccccc-----------hhh-hhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHHHHHHh
Confidence            2221100           000 0000000111111122345667999999999999999999999975  4555554443

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.90  E-value=1.6e-23  Score=145.31  Aligned_cols=126  Identities=16%  Similarity=0.212  Sum_probs=89.4

Q ss_pred             CcceEecCCc----eEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCC
Q 039452            1 PSNVLLDDNM----VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPT   76 (164)
Q Consensus         1 p~Nill~~~~----~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~   76 (164)
                      |+|||++.++    .+||+|||+++.+....   ......|++.|+||| +.....++.++|+||+|+++|++++|..||
T Consensus       142 p~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE-~~~~~~~~~~~DiwslG~il~~ll~g~~pf  217 (326)
T 2y0a_A          142 PENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPF  217 (326)
T ss_dssp             GGGEEESCSSSSSCCEEECCCTTCEECCTTS---CCCCCCSCTTTCCHH-HHTTCCCCTHHHHHHHHHHHHHHHHSCCSS
T ss_pred             HHHEEEecCCCCCCCEEEEECCCCeECCCCC---ccccccCCcCcCCce-eecCCCCCcHHHHHHHHHHHHHHHHCcCCC
Confidence            6899998877    79999999998753211   223456899999995 445566889999999999999999999999


Q ss_pred             CccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           77 DEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .......  ..           ..+ ...   ...........++..+.+++.+||+.||.+|||+.++++
T Consensus       218 ~~~~~~~--~~-----------~~~-~~~---~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  271 (326)
T 2y0a_A          218 LGDTKQE--TL-----------ANV-SAV---NYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  271 (326)
T ss_dssp             CCSSHHH--HH-----------HHH-HHT---CCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CCCCHHH--HH-----------HHH-Hhc---CCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            6432111  00           000 000   111111222345566889999999999999999999986

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.90  E-value=1.4e-23  Score=150.14  Aligned_cols=142  Identities=21%  Similarity=0.190  Sum_probs=92.2

Q ss_pred             CcceEecC-CceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDD-NMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+|||++. .+.+||+|||+++.+....   ......+++.|+|||.+.....++.++||||+||++|+|++|..||...
T Consensus       184 p~NILl~~~~~~~kl~DFG~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~  260 (420)
T 1j1b_A          184 PQNLLLDPDTAVLKLCDFGSAKQLVRGE---PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD  260 (420)
T ss_dssp             GGGEEEETTTTEEEECCCTTCEECCTTC---CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             hhhEEEeCCCCeEEeccchhhhhcccCC---CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence            68999995 4678999999998753222   2234578999999976655556889999999999999999999999753


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhc-------cc---ccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANL-------LT---REDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~---~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .. ...+...+... .....+.+....       ..   ........+...+..+.+|+.+||..||.+|||+.++++
T Consensus       261 ~~-~~~l~~i~~~l-g~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~  336 (420)
T 1j1b_A          261 SG-VDQLVEIIKVL-GTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  336 (420)
T ss_dssp             SH-HHHHHHHHHHH-CSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CH-HHHHHHHHHHh-CCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence            21 11222222111 111111111100       00   000000111234567999999999999999999999886

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.90  E-value=3.5e-24  Score=144.86  Aligned_cols=128  Identities=24%  Similarity=0.380  Sum_probs=85.6

Q ss_pred             CcceEecC--------CceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhc
Q 039452            1 PSNVLLDD--------NMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTR   72 (164)
Q Consensus         1 p~Nill~~--------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g   72 (164)
                      |+||+++.        ++.+||+|||.+..+...    ......+++.|+|||.+ ....++.++|+||+|+++|++++|
T Consensus       136 p~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~~l~~l~~g  210 (271)
T 3dtc_A          136 SSNILILQKVENGDLSNKILKITDFGLAREWHRT----TKMSAAGAYAWMAPEVI-RASMFSKGSDVWSYGVLLWELLTG  210 (271)
T ss_dssp             GGGEEESSCCSSSCCSSCCEEECCCCC-----------------CCGGGSCHHHH-HHCCCSHHHHHHHHHHHHHHHHHC
T ss_pred             hHHEEEecccccccccCcceEEccCCcccccccc----cccCCCCccceeCHHHh-ccCCCCchhhHHHHHHHHHHHHhC
Confidence            68999985        778999999999765221    12234688999999544 456688899999999999999999


Q ss_pred             CCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHH
Q 039452           73 KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI  152 (164)
Q Consensus        73 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~  152 (164)
                      ..||..........             .....      ......+..++..+.+++.+||+.||.+|||+.++++.|.++
T Consensus       211 ~~p~~~~~~~~~~~-------------~~~~~------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          211 EVPFRGIDGLAVAY-------------GVAMN------KLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             CCTTTTSCHHHHHH-------------HHHTS------CCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             CCCCCCCCHHHHHH-------------hhhcC------CCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence            99997432111000             00000      011112234456689999999999999999999999998764

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.90  E-value=9.2e-24  Score=145.60  Aligned_cols=120  Identities=18%  Similarity=0.169  Sum_probs=85.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||++.....   ........|++.|+|||.+. + .++.++||||+|+++|++++|..++....
T Consensus       185 p~NIll~~~~~~kl~DFG~a~~~~~---~~~~~~~~gt~~y~aPE~~~-~-~~~~~~DiwslG~il~el~~g~~~~~~~~  259 (311)
T 3p1a_A          185 PANIFLGPRGRCKLGDFGLLVELGT---AGAGEVQEGDPRYMAPELLQ-G-SYGTAADVFSLGLTILEVACNMELPHGGE  259 (311)
T ss_dssp             GGGEEECGGGCEEECCCTTCEECC---------CCCCCGGGCCGGGGG-T-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH
T ss_pred             HHHEEECCCCCEEEccceeeeeccc---CCCCcccCCCccccCHhHhc-C-CCCchhhHHHHHHHHHHHHhCCCCCCCcc
Confidence            6899999999999999999877521   22233456899999996554 3 58899999999999999999977654210


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                          .            ...+.. .     ......+..++..+.+++.+||+.||++|||++++++
T Consensus       260 ----~------------~~~~~~-~-----~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          260 ----G------------WQQLRQ-G-----YLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             ----H------------HHHHTT-T-----CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             ----H------------HHHHhc-c-----CCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence                0            001110 0     1111223445677999999999999999999999986

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.90  E-value=2.4e-24  Score=160.80  Aligned_cols=136  Identities=26%  Similarity=0.376  Sum_probs=95.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCC-ccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQ-SMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~   78 (164)
                      |+|||++.++.+||+|||+++.+..... ........++..|+|||.+ ....++.++||||+||++|++++ |..||..
T Consensus       497 p~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~-~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~  575 (635)
T 4fl3_A          497 ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI-NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG  575 (635)
T ss_dssp             GGGEEEEETTEEEECCTTHHHHTTC-------------CGGGSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred             hHhEEEeCCCCEEEEEcCCccccccCccccccccCCCCceeeeChhhh-cCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            6899999999999999999987532221 1222334567889999544 56668899999999999999998 9999975


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhh
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLF  157 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~  157 (164)
                      .....              ....+....      ....+..++..+.+++.+||+.||++|||+++|++.|+++...+.
T Consensus       576 ~~~~~--------------~~~~i~~~~------~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~l~  634 (635)
T 4fl3_A          576 MKGSE--------------VTAMLEKGE------RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV  634 (635)
T ss_dssp             CCHHH--------------HHHHHHTTC------CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHC
T ss_pred             CCHHH--------------HHHHHHcCC------CCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHhc
Confidence            32211              111111111      111223456779999999999999999999999999999887653

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.90  E-value=3e-23  Score=145.14  Aligned_cols=145  Identities=20%  Similarity=0.220  Sum_probs=92.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCC--CccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGED--QSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+|||++.++.+||+|||+++.+....  .........+++.|+|||.+.....++.++||||+||++|++++|..||..
T Consensus       152 p~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  231 (351)
T 3mi9_A          152 AANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQG  231 (351)
T ss_dssp             GGGEEECTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             HHHEEEcCCCCEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCC
Confidence            689999999999999999998753211  112233456899999997666556688999999999999999999999975


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhh---------hcccc---cchhhh-hHHHHHHHHHHHHhhccccCccCCCCHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDA---------NLLTR---EDRHFA-AKQQCVSFVFNLAMECTIESPERRINAKEI  145 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~---~~~~~~-~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v  145 (164)
                      ...  ......+..............         .....   ...... .....++.+.+++.+||+.||.+|||++++
T Consensus       232 ~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~  309 (351)
T 3mi9_A          232 NTE--QHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA  309 (351)
T ss_dssp             SSH--HHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             CCh--HHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHH
Confidence            321  111111111111110000000         00000   000000 001124568899999999999999999999


Q ss_pred             HH
Q 039452          146 VT  147 (164)
Q Consensus       146 l~  147 (164)
                      ++
T Consensus       310 l~  311 (351)
T 3mi9_A          310 LN  311 (351)
T ss_dssp             HT
T ss_pred             hC
Confidence            87

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.90  E-value=4.2e-24  Score=145.95  Aligned_cols=137  Identities=25%  Similarity=0.365  Sum_probs=97.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc-cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS-MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~   78 (164)
                      |+||+++.++.+||+|||++......... .......++..|+|||.+ ....++.++|+||+|+++|++++ |..||..
T Consensus       145 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~~g~~p~~~  223 (291)
T 1xbb_A          145 ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI-NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG  223 (291)
T ss_dssp             GGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHH-HHCEEEHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred             cceEEEeCCCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHh-ccCCCChhhhHHHHHHHHHHHHhcCCCCCCC
Confidence            68999999999999999999875322221 112223456889999554 45567889999999999999999 9999874


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhhc
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFR  158 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~~  158 (164)
                      .....  ..            ..+.....      ...+..++..+.+++.+||+.||.+|||+.++++.|+++......
T Consensus       224 ~~~~~--~~------------~~~~~~~~------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~  283 (291)
T 1xbb_A          224 MKGSE--VT------------AMLEKGER------MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN  283 (291)
T ss_dssp             CCHHH--HH------------HHHHTTCC------CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHH
T ss_pred             CCHHH--HH------------HHHHcCCC------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhh
Confidence            32111  11            11111110      111234566689999999999999999999999999999887654

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.89  E-value=2.4e-24  Score=145.56  Aligned_cols=133  Identities=26%  Similarity=0.478  Sum_probs=93.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||++...... .........++..|+|||.+ ....++.++|+||+|+++|++++ |..||...
T Consensus       134 p~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~  211 (269)
T 4hcu_A          134 ARNCLVGENQVIKVSDFGMTRFVLDD-QYTSSTGTKFPVKWASPEVF-SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR  211 (269)
T ss_dssp             GGGEEECGGGCEEECCTTGGGGBCCH-HHHSTTSTTCCGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             hheEEEcCCCCEEecccccccccccc-ccccccCcccccccCCHHHh-cCCCCCchhhhHHHHHHHHHHhcCCCCCCCCC
Confidence            68999999999999999999764211 11122234467789999544 55668889999999999999999 89998643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDS  155 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~  155 (164)
                      ....  ..            ..+.....      ...+..++..+.+++.+||+.||++|||++++++.|..+.++
T Consensus       212 ~~~~--~~------------~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~  267 (269)
T 4hcu_A          212 SNSE--VV------------EDISTGFR------LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES  267 (269)
T ss_dssp             CHHH--HH------------HHHHTTCC------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             CHHH--HH------------HHHhcCcc------CCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence            2111  10            00111100      011222345588999999999999999999999999998753

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.89  E-value=1.9e-24  Score=149.52  Aligned_cols=137  Identities=23%  Similarity=0.430  Sum_probs=96.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||+++...............+++.|+|||.+ ....++.++|+||+|+++|++++ |..||...
T Consensus       166 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~el~~~g~~p~~~~  244 (322)
T 1p4o_A          166 ARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL-KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL  244 (322)
T ss_dssp             GGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS
T ss_pred             cceEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhh-ccCCCCchhhHHHHHHHHHHHHhcCCCccccC
Confidence            68999999999999999998765322222223344567889999554 45567889999999999999999 88888643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhhc
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFR  158 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~~  158 (164)
                      ....  ..            ..+.....      ...+..++..+.+++.+||+.||.+|||+.++++.|.++.+..+.
T Consensus       245 ~~~~--~~------------~~~~~~~~------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~~~  303 (322)
T 1p4o_A          245 SNEQ--VL------------RFVMEGGL------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFR  303 (322)
T ss_dssp             CHHH--HH------------HHHHTTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHH
T ss_pred             CHHH--HH------------HHHHcCCc------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccCCc
Confidence            2111  10            11111100      011234456689999999999999999999999999887655443

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.89  E-value=1.6e-23  Score=146.65  Aligned_cols=126  Identities=19%  Similarity=0.214  Sum_probs=88.4

Q ss_pred             CcceEecCCc---eEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCC
Q 039452            1 PSNVLLDDNM---VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         1 p~Nill~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      |+|||++.++   .+||+|||++..+..  .........|++.|+|||. .....++.++||||+||++|++++|..||.
T Consensus       158 p~NIl~~~~~~~~~vkl~Dfg~a~~~~~--~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~DiwslG~il~~ll~g~~pf~  234 (351)
T 3c0i_A          158 PHCVLLASKENSAPVKLGGFGVAIQLGE--SGLVAGGRVGTPHFMAPEV-VKREPYGKPVDVWGCGVILFILLSGCLPFY  234 (351)
T ss_dssp             GGGEEECSSSTTCCEEECCCTTCEECCT--TSCBCCCCCSCGGGCCHHH-HTTCCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             hHHeEEecCCCCCcEEEecCcceeEecC--CCeeecCCcCCcCccCHHH-HcCCCCCchHhhHHHHHHHHHHHHCCCCCC
Confidence            7899997654   499999999987632  2222334578999999954 445568899999999999999999999996


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ...   ...           ...+.. .   ...........++..+.+++.+||+.||++|||+.++++
T Consensus       235 ~~~---~~~-----------~~~i~~-~---~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          235 GTK---ERL-----------FEGIIK-G---KYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             SSH---HHH-----------HHHHHH-T---CCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CcH---HHH-----------HHHHHc-C---CCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            421   100           001111 1   111111122345667899999999999999999999986

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.89  E-value=1.4e-23  Score=142.15  Aligned_cols=129  Identities=24%  Similarity=0.339  Sum_probs=91.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||.+..+.............++..|+|||.+......+.++|+||+|+++|++++|..||....
T Consensus       133 p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  212 (276)
T 2yex_A          133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS  212 (276)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSC
T ss_pred             hHHEEEccCCCEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCc
Confidence            68999999999999999999765322222223345688999999665544444778999999999999999999997543


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ........+..            ..      ........++..+.+++.+||+.||.+|||++++++
T Consensus       213 ~~~~~~~~~~~------------~~------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          213 DSCQEYSDWKE------------KK------TYLNPWKKIDSAPLALLHKILVENPSARITIPDIKK  261 (276)
T ss_dssp             TTSHHHHHHHT------------TC------TTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             hHHHHHHHhhh------------cc------cccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence            33222221110            00      001112344566889999999999999999999886

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.89  E-value=5.5e-24  Score=147.83  Aligned_cols=144  Identities=22%  Similarity=0.258  Sum_probs=89.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||.++.+...  ........++..|+|||.+.....++.++|+||+|+++|++++|..||....
T Consensus       152 p~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  229 (331)
T 4aaa_A          152 PENILVSQSGVVKLCDFGFARTLAAP--GEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDS  229 (331)
T ss_dssp             GGGEEECTTSCEEECCCTTC--------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             hheEEEcCCCcEEEEeCCCceeecCC--ccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            68999999999999999999765221  1222345688999999766555568889999999999999999999997532


Q ss_pred             cCchhHHHHHHHhhh--hhhHHHhhhh---------cccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLS--VSVMEVVDAN---------LLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~--~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .... ..........  ..........         ............+.++..+.+++.+||+.||++|||++++++
T Consensus       230 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  306 (331)
T 4aaa_A          230 DIDQ-LYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH  306 (331)
T ss_dssp             HHHH-HHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             cHHH-HHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            2211 1111110000  0000111100         000111111222345677999999999999999999999886

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.89  E-value=4.5e-24  Score=155.46  Aligned_cols=131  Identities=22%  Similarity=0.398  Sum_probs=94.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+|||++.++.+||+|||+++.+... .........++..|+|||. .....++.++||||||+++|+|++ |..||...
T Consensus       346 p~NIll~~~~~~kl~DFG~a~~~~~~-~~~~~~~~~~~~~y~aPE~-~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~  423 (495)
T 1opk_A          346 ARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI  423 (495)
T ss_dssp             GGGEEECGGGCEEECCTTCEECCTTC-CEECCTTCCCCGGGCCHHH-HHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             hhhEEECCCCcEEEeecccceeccCC-ceeecCCCcCCcceeCHhH-HhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCC
Confidence            68999999999999999999875321 1122223445778999955 455668899999999999999998 88998753


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIR  153 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~  153 (164)
                      ....  ..            ..+....      ....+..++..+.+++.+||+.||.+|||+.++++.|+.+.
T Consensus       424 ~~~~--~~------------~~~~~~~------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~  477 (495)
T 1opk_A          424 DLSQ--VY------------ELLEKDY------RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF  477 (495)
T ss_dssp             CGGG--HH------------HHHHTTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred             CHHH--HH------------HHHHcCC------CCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence            2211  11            1111111      11123345667899999999999999999999999998764

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.89  E-value=1.8e-23  Score=147.35  Aligned_cols=140  Identities=18%  Similarity=0.162  Sum_probs=90.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||+++....     ......+++.|+|||.+.....++.++|+||+||++|++++|..||....
T Consensus       172 p~NIll~~~~~~kL~Dfg~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  246 (371)
T 4exu_A          172 PGNLAVNEDCELKILDFGLARHADA-----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD  246 (371)
T ss_dssp             GGGEEECTTCCEEECSTTCC-------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             HHHeEECCCCCEEEEecCccccccc-----CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999976421     12345679999999766655678899999999999999999999997532


Q ss_pred             cCchhHHHHHHHhhhhhhHH------------HhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVME------------VVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ... ...... ........+            ...................+++.+.+++.+||+.||++|||++++++
T Consensus       247 ~~~-~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  323 (371)
T 4exu_A          247 YLD-QLTQIL-KVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  323 (371)
T ss_dssp             HHH-HHHHHH-HHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             hHH-HHHHHH-HHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence            111 111111 111111111            11111111111111222345677999999999999999999999986

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.89  E-value=2.7e-23  Score=146.16  Aligned_cols=127  Identities=24%  Similarity=0.290  Sum_probs=89.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhc-----cCcccCccchHhHHHHHHHHHhcCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGR-----EGRVSTNGDVYSFGIMLMEAFTRKKP   75 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-----~~~~~~~~Di~s~g~~~~~~~~g~~p   75 (164)
                      |+||+++.++.++|+|||++..+...   .......|++.|+|||.+..     ...++.++|+||+||++|++++|..|
T Consensus       228 p~NIl~~~~~~ikl~DfG~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~p  304 (365)
T 2y7j_A          228 PENILLDDNMQIRLSDFGFSCHLEPG---EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP  304 (365)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECCTT---CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCS
T ss_pred             HHHEEECCCCCEEEEecCcccccCCC---cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCC
Confidence            68999999999999999998875321   12334578999999966542     23477899999999999999999999


Q ss_pred             CCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           76 TDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      |.....  ....            ..+...   ...........++..+.+++.+||+.||++|||++++++
T Consensus       305 f~~~~~--~~~~------------~~i~~~---~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  359 (365)
T 2y7j_A          305 FWHRRQ--ILML------------RMIMEG---QYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ  359 (365)
T ss_dssp             SCCSSH--HHHH------------HHHHHT---CCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CCCCCH--HHHH------------HHHHhC---CCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            964211  1100            001011   111111122334566899999999999999999999986

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.89  E-value=4.8e-24  Score=146.09  Aligned_cols=126  Identities=23%  Similarity=0.337  Sum_probs=88.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCc--ccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGR--VSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~--~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+|||++.++.+||+|||+++.+..  .........|++.|+|||.+.....  .+.++|+||+|+++|++++|..||..
T Consensus       165 p~Nil~~~~~~~kl~Dfg~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~  242 (298)
T 2zv2_A          165 PSNLLVGEDGHIKIADFGVSNEFKG--SDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD  242 (298)
T ss_dssp             GGGEEECTTSCEEECCCTTCEECSS--SSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             HHHEEECCCCCEEEecCCCcccccc--ccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence            6899999999999999999987632  2222334578999999966543332  46778999999999999999999964


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ...  .....           .+..... .     ......++..+.+++.+||+.||++|||+.++++
T Consensus       243 ~~~--~~~~~-----------~~~~~~~-~-----~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          243 ERI--MCLHS-----------KIKSQAL-E-----FPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             SSH--HHHHH-----------HHHHCCC-C-----CCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             ccH--HHHHH-----------HHhcccC-C-----CCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence            311  11100           0000000 0     0111234556899999999999999999999875

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.89  E-value=1.2e-23  Score=142.86  Aligned_cols=130  Identities=26%  Similarity=0.420  Sum_probs=89.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||.+......     .....++..|+|||.+ ....++.++|+||+|+++|++++ |..||...
T Consensus       145 p~Nil~~~~~~~~l~Dfg~~~~~~~~-----~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~  218 (278)
T 1byg_A          145 ARNVLVSEDNVAKVSDFGLTKEASST-----QDTGKLPVKWTAPEAL-REKKFSTKSDVWSFGILLWEIYSFGRVPYPRI  218 (278)
T ss_dssp             GGGEEECTTSCEEECCCCC-----------------CCTTTSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS
T ss_pred             cceEEEeCCCcEEEeecccccccccc-----ccCCCccccccCHHHh-CCCCCCchhcHHHHHHHHHHHHhCCCCCCCCC
Confidence            68999999999999999998764211     1233567889999554 45667889999999999999998 99998643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHh
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL  156 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~  156 (164)
                      ....  ..            ..+....      ....+..+++.+.+++.+||+.||.+|||+.++++.|+++....
T Consensus       219 ~~~~--~~------------~~~~~~~------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~  275 (278)
T 1byg_A          219 PLKD--VV------------PRVEKGY------KMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE  275 (278)
T ss_dssp             CGGG--HH------------HHHTTTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             CHHH--HH------------HHHhcCC------CCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence            2111  00            0011110      01112344566899999999999999999999999999998653

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.89  E-value=5.9e-24  Score=150.74  Aligned_cols=128  Identities=22%  Similarity=0.377  Sum_probs=84.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhc----------cCcccCccchHhHHHHHHHHH
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGR----------EGRVSTNGDVYSFGIMLMEAF   70 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~----------~~~~~~~~Di~s~g~~~~~~~   70 (164)
                      |+|||++ ++.+||+|||+++.+.............|++.|+|||.+..          ...++.++||||+||++|+|+
T Consensus       183 p~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell  261 (390)
T 2zmd_A          183 PANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT  261 (390)
T ss_dssp             GGGEEES-SSCEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHH
T ss_pred             HHHEEEE-CCeEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHH
Confidence            6899995 57899999999987632222222344579999999966543          135778999999999999999


Q ss_pred             hcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           71 TRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        71 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      +|..||.........            ...+++.....      ..+...+..+.+++.+||..||.+|||+.++++
T Consensus       262 ~G~~Pf~~~~~~~~~------------~~~~~~~~~~~------~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  320 (390)
T 2zmd_A          262 YGKTPFQQIINQISK------------LHAIIDPNHEI------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  320 (390)
T ss_dssp             HSSCTTTTCCCHHHH------------HHHHHCTTSCC------CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HCCCcchhhhHHHHH------------HHHHhCccccC------CCCccchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence            999999643211111            11111111100      011122445889999999999999999999985

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.89  E-value=1e-23  Score=146.81  Aligned_cols=118  Identities=22%  Similarity=0.278  Sum_probs=88.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||++..+...   .......|++.|+|||.+......+.++||||+|+++|++++|..||....
T Consensus       158 p~NIll~~~~~~kL~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  234 (335)
T 3dls_A          158 DENIVIAEDFTIKLIDFGSAAYLERG---KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELE  234 (335)
T ss_dssp             GGGEEECTTSCEEECCCTTCEECCTT---CCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGG
T ss_pred             HHHEEEcCCCcEEEeecccceECCCC---CceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHH
Confidence            68999999999999999999875321   122345689999999666544444788999999999999999999996421


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTE  148 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  148 (164)
                      .                   ......        ..+..++..+.+++.+||+.||.+|||++++++.
T Consensus       235 ~-------------------~~~~~~--------~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          235 E-------------------TVEAAI--------HPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD  275 (335)
T ss_dssp             G-------------------GTTTCC--------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred             H-------------------HHhhcc--------CCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            0                   000000        0112245568999999999999999999999873

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.89  E-value=1.1e-23  Score=143.50  Aligned_cols=134  Identities=22%  Similarity=0.391  Sum_probs=96.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.++|+|||.+...... .........++..|+|||.+ ....++.++|+||+|+++|++++ |..||...
T Consensus       139 p~Nil~~~~~~~~l~Dfg~~~~~~~~-~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~  216 (288)
T 3kfa_A          139 ARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESL-AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI  216 (288)
T ss_dssp             GGGEEECGGGCEEECCCCGGGTSCSS-SSEEETTEEECGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             cceEEEcCCCCEEEccCccceeccCC-ccccccCCccccCcCChhhh-ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            68999999999999999999765322 12223334567789999554 45568889999999999999999 88998643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHh
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL  156 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~  156 (164)
                      ....  ..            ..+.....      ...+..+++.+.+++.+||+.||.+|||++++++.|..+.++.
T Consensus       217 ~~~~--~~------------~~~~~~~~------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~  273 (288)
T 3kfa_A          217 DLSQ--VY------------ELLEKDYR------MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES  273 (288)
T ss_dssp             CGGG--HH------------HHHHTTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             CHHH--HH------------HHHhccCC------CCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence            2211  11            11111111      1112344566899999999999999999999999999987754

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.89  E-value=6e-24  Score=150.06  Aligned_cols=126  Identities=14%  Similarity=0.133  Sum_probs=89.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhcc----------CcccCccchHhHHHHHHHHH
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGRE----------GRVSTNGDVYSFGIMLMEAF   70 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~----------~~~~~~~Di~s~g~~~~~~~   70 (164)
                      |+|||++.++.+||+|||+++..   ..  ......| ..|+|||.+...          ..++.++||||+||++|+|+
T Consensus       234 p~NIll~~~~~~kL~DFG~a~~~---~~--~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~ell  307 (377)
T 3byv_A          234 PVDIVLDQRGGVFLTGFEHLVRD---GA--RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIW  307 (377)
T ss_dssp             GGGEEECTTCCEEECCGGGCEET---TC--EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHH
T ss_pred             HHHEEEcCCCCEEEEechhheec---CC--cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHH
Confidence            78999999999999999999863   11  2234456 899999665543          26888999999999999999


Q ss_pred             hcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH--H
Q 039452           71 TRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT--E  148 (164)
Q Consensus        71 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~--~  148 (164)
                      +|..||........                 .....        .....++..+.+++.+||+.||++|||+.++++  .
T Consensus       308 tg~~Pf~~~~~~~~-----------------~~~~~--------~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~  362 (377)
T 3byv_A          308 CADLPITKDAALGG-----------------SEWIF--------RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPE  362 (377)
T ss_dssp             HSSCCC------CC-----------------SGGGG--------SSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHH
T ss_pred             HCCCCCcccccccc-----------------hhhhh--------hhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChH
Confidence            99999964221110                 00000        001234556889999999999999999999996  6


Q ss_pred             HHHHHHHhh
Q 039452          149 LSKIRDSLF  157 (164)
Q Consensus       149 l~~~~~~~~  157 (164)
                      +..+.+.+.
T Consensus       363 f~~~~~~~~  371 (377)
T 3byv_A          363 YEQLRTELS  371 (377)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            666665544

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.89  E-value=1.3e-23  Score=149.41  Aligned_cols=131  Identities=18%  Similarity=0.209  Sum_probs=85.7

Q ss_pred             CcceEecC---CceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCC
Q 039452            1 PSNVLLDD---NMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         1 p~Nill~~---~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      |+|||++.   ++.+||+|||+++....   ........||+.|+||| +.....++.++||||+||++|+|++|..||.
T Consensus       189 p~Nill~~~~~~~~~kl~DFG~a~~~~~---~~~~~~~~gt~~y~aPE-~~~~~~~~~~~DiwslG~il~ell~g~~pf~  264 (400)
T 1nxk_A          189 PENLLYTSKRPNAILKLTDFGFAKETTS---HNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFY  264 (400)
T ss_dssp             GGGEEESSSSTTCCEEECCCTTCEECC--------------CTTCCGG-GSCCCCSSSHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             cceEEEecCCCCccEEEEecccccccCC---CCccccCCCCCCccCHh-hcCCCCCCCcccHHHHHHHHHHHHhCCCCCC
Confidence            68999987   78999999999986521   12233456899999995 4456678899999999999999999999997


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHH
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTE  148 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  148 (164)
                      .........          .....+.....   .........++..+.+++.+||+.||.+|||+.++++.
T Consensus       265 ~~~~~~~~~----------~~~~~i~~~~~---~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  322 (400)
T 1nxk_A          265 SNHGLAISP----------GMKTRIRMGQY---EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  322 (400)
T ss_dssp             CCTTCSSCC----------SHHHHHHHTCC---CCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             CCccccccH----------HHHHHHHcCcc---cCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            532221100          00000111110   11111123456678999999999999999999999873

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.89  E-value=2.6e-23  Score=149.05  Aligned_cols=73  Identities=23%  Similarity=0.221  Sum_probs=59.4

Q ss_pred             CcceEecCCce--EEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDDNMV--AHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~--~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+|||++.++.  +||+|||++.....     ......+++.|+|||.+ ....++.++||||+||++|+|++|..||..
T Consensus       228 p~NILl~~~~~~~vkL~DFG~a~~~~~-----~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwSlG~il~elltG~~pf~~  301 (429)
T 3kvw_A          228 PENILLKQQGRSGIKVIDFGSSCYEHQ-----RVYTYIQSRFYRAPEVI-LGARYGMPIDMWSLGCILAELLTGYPLLPG  301 (429)
T ss_dssp             GGGEEESSTTSCCEEECCCTTCEETTC-----CCCSSCSCGGGCCHHHH-HTBCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             HHHeEEccCCCcceEEeecccceecCC-----cccccCCCCCccChHHH-hCCCCCchHHHHhHHHHHHHHHhCCCCCCC
Confidence            68999998887  99999999976411     12345789999999555 455688999999999999999999999975


Q ss_pred             c
Q 039452           79 M   79 (164)
Q Consensus        79 ~   79 (164)
                      .
T Consensus       302 ~  302 (429)
T 3kvw_A          302 E  302 (429)
T ss_dssp             S
T ss_pred             C
Confidence            3

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.89  E-value=6.8e-24  Score=147.13  Aligned_cols=135  Identities=24%  Similarity=0.379  Sum_probs=95.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||+++...   .........++..|+|||.+ ....++.++|+||+|+++|++++ |..||...
T Consensus       170 p~NIl~~~~~~~kL~Dfg~~~~~~---~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~ellt~g~~pf~~~  245 (327)
T 1fvr_A          170 ARNILVGENYVAKIADFGLSRGQE---VYVKKTMGRLPVRWMAIESL-NYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM  245 (327)
T ss_dssp             GGGEEECGGGCEEECCTTCEESSC---EECCC----CCTTTCCHHHH-HHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             cceEEEcCCCeEEEcccCcCcccc---ccccccCCCCCccccChhhh-ccccCCchhcchHHHHHHHHHHcCCCCCCCCC
Confidence            689999999999999999987431   11122334567889999544 55667889999999999999998 99999643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhhcc
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRN  159 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~~~  159 (164)
                      ....  .            ...+....      ....+..++..+.+++.+||..||.+|||++++++.|..+.++....
T Consensus       246 ~~~~--~------------~~~~~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~  305 (327)
T 1fvr_A          246 TCAE--L------------YEKLPQGY------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTY  305 (327)
T ss_dssp             CHHH--H------------HHHGGGTC------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSSCS
T ss_pred             cHHH--H------------HHHhhcCC------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhcCc
Confidence            2111  0            01111110      01112234566899999999999999999999999999998876543

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.89  E-value=3.9e-23  Score=146.19  Aligned_cols=142  Identities=23%  Similarity=0.215  Sum_probs=93.8

Q ss_pred             CcceEec-CCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLD-DNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~-~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+|||++ .++.+||+|||+++.+....   ......++..|+|||.+.....++.++||||+||++|+|++|..||...
T Consensus       169 p~Nil~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~  245 (383)
T 3eb0_A          169 PQNLLVNSKDNTLKLCDFGSAKKLIPSE---PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGE  245 (383)
T ss_dssp             GGGEEEETTTTEEEECCCTTCEECCTTS---CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             HHHEEEcCCCCcEEEEECCCCcccCCCC---CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCC
Confidence            6899997 68999999999998753222   2334567899999976665556889999999999999999999999753


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhc----------ccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANL----------LTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ... ..+...+... .....+.+....          ..........+..++..+.+++.+||+.||.+|||+.++++
T Consensus       246 ~~~-~~~~~i~~~~-g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  321 (383)
T 3eb0_A          246 TSI-DQLVRIIQIM-GTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMA  321 (383)
T ss_dssp             SHH-HHHHHHHHHH-CCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             ChH-HHHHHHHHHh-CCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            221 1122221111 111111110000          00011111123345667999999999999999999999984

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.89  E-value=2.5e-23  Score=146.75  Aligned_cols=126  Identities=21%  Similarity=0.207  Sum_probs=89.4

Q ss_pred             CcceEe--cCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLL--DDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill--~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+|||+  +.++.+||+|||+++.+...   .......|++.|+||| +.....++.++|+||+||++|+|++|..||..
T Consensus       215 p~NIll~~~~~~~~kl~DFG~a~~~~~~---~~~~~~~gt~~y~aPE-~~~~~~~~~~~DiwslG~il~elltg~~pf~~  290 (373)
T 2x4f_A          215 PENILCVNRDAKQIKIIDFGLARRYKPR---EKLKVNFGTPEFLAPE-VVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLG  290 (373)
T ss_dssp             GGGEEEEETTTTEEEECCCSSCEECCTT---CBCCCCCSSCTTCCHH-HHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             HHHEEEecCCCCcEEEEeCCCceecCCc---cccccccCCCcEeChh-hccCCCCCcHHhHHHHHHHHHHHHhCCCCCCC
Confidence            689999  56789999999999875321   1223456899999995 44566688899999999999999999999974


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ..... .            ...+....    ..........++..+.+++.+||+.||.+|||+.++++
T Consensus       291 ~~~~~-~------------~~~i~~~~----~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~  342 (373)
T 2x4f_A          291 DNDAE-T------------LNNILACR----WDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALK  342 (373)
T ss_dssp             SSHHH-H------------HHHHHHTC----CCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CCHHH-H------------HHHHHhcc----CCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            32111 0            11111111    01111122345667899999999999999999999987

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.89  E-value=7.2e-24  Score=145.35  Aligned_cols=146  Identities=18%  Similarity=0.319  Sum_probs=95.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc-cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS-MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||.+..+...... .......++..|+|||.+ ....++.++|+||+|+++|++++|..|+...
T Consensus       154 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  232 (302)
T 4e5w_A          154 ARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECL-MQSKFYIASDVWSFGVTLHELLTYCDSDSSP  232 (302)
T ss_dssp             GGGEEEEETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHH-HHCEEEHHHHHHHHHHHHHHHHTTTCGGGSH
T ss_pred             hheEEEcCCCCEEECcccccccccCCCcceeccCCCCCCccccCCeee-cCCCCCcchhHHHHHHHHHHHHHccCCCcch
Confidence            68999999999999999999876322221 122344577889999544 4566788999999999999999999886421


Q ss_pred             ccCchhHHHHHHHhhhh-hhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSV-SVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIR  153 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~  153 (164)
                      ..   ............ ...........   ......+..++..+.+++.+||+.||.+|||+.++++.|+++.
T Consensus       233 ~~---~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll  301 (302)
T 4e5w_A          233 MA---LFLKMIGPTHGQMTVTRLVNTLKE---GKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL  301 (302)
T ss_dssp             HH---HHHHHHCSCCGGGHHHHHHHHHHT---TCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hh---HHhhccCCcccccCHHHHHHHHhc---cCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence            10   000000000000 01111111100   0111122345667999999999999999999999999999875

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.89  E-value=5.9e-24  Score=149.92  Aligned_cols=135  Identities=24%  Similarity=0.472  Sum_probs=85.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc-cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS-MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~   78 (164)
                      |+|||++.++.+||+|||+++.+...... .......++..|+|||.+ ....++.++||||+|+++|++++ |..||..
T Consensus       175 p~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~  253 (373)
T 2qol_A          175 ARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGERPYWE  253 (373)
T ss_dssp             GGGEEECTTCCEEECCC----------------------CTTSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTC-CTTTT
T ss_pred             cceEEEcCCCCEEECcCccccccccCCccceeccCCCcCCCccChhhh-ccCCcCchhcHHHHHHHHHHHHhCCCCCCCC
Confidence            68999999999999999999875322111 111122346789999544 45668889999999999999997 9999864


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHh
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL  156 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~  156 (164)
                      .....  .            ...+.....      ...+..++..+.+++.+||+.||.+|||+.++++.|+.+.+..
T Consensus       254 ~~~~~--~------------~~~i~~~~~------~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~  311 (373)
T 2qol_A          254 MSNQD--V------------IKAVDEGYR------LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP  311 (373)
T ss_dssp             CCHHH--H------------HHHHHTTEE------CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred             CCHHH--H------------HHHHHcCCC------CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence            32111  1            111111111      1112234566899999999999999999999999999987653

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.89  E-value=5.2e-24  Score=147.69  Aligned_cols=150  Identities=22%  Similarity=0.317  Sum_probs=95.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc-cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS-MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||.++........ .......++..|+|||. .....++.++||||+|+++|++++|..||...
T Consensus       155 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~  233 (327)
T 3lxl_A          155 ARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES-LSDNIFSRQSDVWSFGVVLYELFTYCDKSCSP  233 (327)
T ss_dssp             GGGEEEEETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHH-HHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSH
T ss_pred             hhhEEECCCCCEEEcccccceecccCCccceeeccCCccccccCHHH-hccCCCChHHhHHHHHHHHHHHHhCCCCCccc
Confidence            68999999999999999999876322221 12233457788999954 45566788999999999999999999998632


Q ss_pred             ccCchhHHHHHHHhh-hhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhh
Q 039452           80 FSGEMTLKRWINDLL-SVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLF  157 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~  157 (164)
                      ............... .......+....      ....+..++..+.+++.+||+.||.+|||++++++.|+.+.....
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~  306 (327)
T 3lxl_A          234 SAEFLRMMGCERDVPALSRLLELLEEGQ------RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR  306 (327)
T ss_dssp             HHHHHHHCC----CCHHHHHHHHHHTTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-----
T ss_pred             cchhhhhcccccccccHHHHHHHhhccc------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence            111000000000000 000111111111      111234456679999999999999999999999999999876554

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.89  E-value=7.8e-24  Score=144.01  Aligned_cols=133  Identities=19%  Similarity=0.394  Sum_probs=93.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||.++..... .........++..|+|||.+ ....++.++|+||+|+++|++++ |..||...
T Consensus       148 p~Nili~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~  225 (283)
T 3gen_A          148 ARNCLVNDQGVVKVSDFGLSRYVLDD-EYTSSVGSKFPVRWSPPEVL-MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF  225 (283)
T ss_dssp             GGGEEECTTSCEEECSTTGGGGBCCH-HHHSTTSTTSCGGGCCHHHH-HHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred             cceEEEcCCCCEEEcccccccccccc-ccccccCCccCcccCCHHHh-ccCCCCchhhHHHHHHHHHHHHhCCCCCcccc
Confidence            68999999999999999999765211 11112233456789999554 45567889999999999999998 99998743


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDS  155 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~  155 (164)
                      ....  ..            ..+......      ..+..++..+.+++.+||+.||.+|||++++++.|.++.++
T Consensus       226 ~~~~--~~------------~~~~~~~~~------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~  281 (283)
T 3gen_A          226 TNSE--TA------------EHIAQGLRL------YRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE  281 (283)
T ss_dssp             CHHH--HH------------HHHHTTCCC------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ChhH--HH------------HHHhcccCC------CCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence            2111  00            111111100      01122345588999999999999999999999999998865

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.89  E-value=6.9e-23  Score=144.40  Aligned_cols=141  Identities=18%  Similarity=0.168  Sum_probs=83.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||+++....   ........++..|+|||.+ ....++.++||||+||++|++++|..||....
T Consensus       155 p~NIl~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  230 (371)
T 2xrw_A          155 PSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVI-LGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD  230 (371)
T ss_dssp             GGGEEECTTSCEEECCCCC-------------------CTTCCHHHH-TTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             HHHEEEcCCCCEEEEEeeccccccc---ccccCCceecCCccCHHHh-cCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999976521   1123345789999999555 45568899999999999999999999997532


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhh-----------hh-cccc-----------cchhhhhHHHHHHHHHHHHhhccccCcc
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVD-----------AN-LLTR-----------EDRHFAAKQQCVSFVFNLAMECTIESPE  137 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~-~~~~-----------~~~~~~~~~~~~~~~~~l~~~cl~~~p~  137 (164)
                      ... ....... .......+...           .. ....           ...........+..+.+++.+||..||.
T Consensus       231 ~~~-~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~  308 (371)
T 2xrw_A          231 HID-QWNKVIE-QLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDAS  308 (371)
T ss_dssp             HHH-HHHHHHC--CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGG
T ss_pred             HHH-HHHHHHH-HhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChh
Confidence            111 1111110 00000001000           00 0000           0001112234467799999999999999


Q ss_pred             CCCCHHHHHH
Q 039452          138 RRINAKEIVT  147 (164)
Q Consensus       138 ~Rps~~~vl~  147 (164)
                      +|||++++++
T Consensus       309 ~R~t~~e~l~  318 (371)
T 2xrw_A          309 KRISVDEALQ  318 (371)
T ss_dssp             GSCCHHHHHH
T ss_pred             hCCCHHHHhC
Confidence            9999999987

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.89  E-value=4.6e-23  Score=143.80  Aligned_cols=130  Identities=17%  Similarity=0.199  Sum_probs=88.0

Q ss_pred             CcceEecCCc--eEEEeccccceeccCCCC--ccccccccccccccCchhhhcc-CcccCccchHhHHHHHHHHHhcCCC
Q 039452            1 PSNVLLDDNM--VAHLSDFGIAKLLIGEDQ--SMTQTQTLATIGYMAPVEYGRE-GRVSTNGDVYSFGIMLMEAFTRKKP   75 (164)
Q Consensus         1 p~Nill~~~~--~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~~~~pe~~~~~-~~~~~~~Di~s~g~~~~~~~~g~~p   75 (164)
                      |+||+++.++  .+||+|||+++.+.....  ........+++.|+|||.+... ..++.++||||+|+++|++++|..|
T Consensus       196 p~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~p  275 (345)
T 3hko_A          196 PENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVP  275 (345)
T ss_dssp             GGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             hhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence            6899998766  899999999987532111  1123445689999999666432 5578899999999999999999999


Q ss_pred             CCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           76 TDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      |........             ........    ..........+++.+.+++.+||+.||.+|||+.++++
T Consensus       276 f~~~~~~~~-------------~~~~~~~~----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~  330 (345)
T 3hko_A          276 FPGVNDADT-------------ISQVLNKK----LCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQ  330 (345)
T ss_dssp             SCCSSHHHH-------------HHHHHHCC----CCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred             CCCCChHHH-------------HHHHHhcc----cccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            964322111             11111111    11111122335667899999999999999999999987

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.89  E-value=2.3e-23  Score=146.43  Aligned_cols=126  Identities=21%  Similarity=0.244  Sum_probs=88.1

Q ss_pred             CcceEecCC---ceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCC
Q 039452            1 PSNVLLDDN---MVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         1 p~Nill~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      |+|||++.+   +.+||+|||++.....   ........|++.|+|||. .....++.++|+||+||++|+|++|..||.
T Consensus       156 p~NIll~~~~~~~~~kl~DfG~a~~~~~---~~~~~~~~gt~~y~aPE~-~~~~~~~~~~DiwslG~il~~ll~g~~Pf~  231 (362)
T 2bdw_A          156 PENLLLASKAKGAAVKLADFGLAIEVND---SEAWHGFAGTPGYLSPEV-LKKDPYSKPVDIWACGVILYILLVGYPPFW  231 (362)
T ss_dssp             GGGEEESCSSTTCCEEECCCTTCBCCTT---CCSCCCSCSCTTTCCHHH-HTTCCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             hHHEEEecCCCCCCEEEeecCcceEecC---CcccccCCCCccccCHHH-HccCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence            789999754   4699999999977532   112234578999999954 455568889999999999999999999996


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ....  ....            ..+....   ..........+++.+.+++.+||+.||.+|||+.++++
T Consensus       232 ~~~~--~~~~------------~~i~~~~---~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  284 (362)
T 2bdw_A          232 DEDQ--HRLY------------AQIKAGA---YDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK  284 (362)
T ss_dssp             CSSH--HHHH------------HHHHHTC---CCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             CCCH--HHHH------------HHHHhCC---CCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            4311  1111            0011111   11111122345667899999999999999999999875

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.89  E-value=4.1e-23  Score=144.45  Aligned_cols=146  Identities=22%  Similarity=0.206  Sum_probs=92.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCcc--------ccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSM--------TQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTR   72 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~--------~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g   72 (164)
                      |+||+++.++.+||+|||+++.+.......        ......|+..|+|||.+.....++.++|+||+||++|++++|
T Consensus       140 p~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g  219 (353)
T 2b9h_A          140 PSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLR  219 (353)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHS
T ss_pred             HHHeEEcCCCcEEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhC
Confidence            689999999999999999998753211110        112346799999997666666788999999999999999999


Q ss_pred             CCCCCccccCchhHHHHHHHhhh------------hhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCC
Q 039452           73 KKPTDEMFSGEMTLKRWINDLLS------------VSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRI  140 (164)
Q Consensus        73 ~~p~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp  140 (164)
                      ..||....... ...........            ....+...................++..+.+++.+||+.||++||
T Consensus       220 ~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp  298 (353)
T 2b9h_A          220 RPIFPGRDYRH-QLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRI  298 (353)
T ss_dssp             SCSCCCSSHHH-HHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSC
T ss_pred             CCCCCCCCcHH-HHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCC
Confidence            99997532111 11111100000            000111111000001111112235667789999999999999999


Q ss_pred             CHHHHHH
Q 039452          141 NAKEIVT  147 (164)
Q Consensus       141 s~~~vl~  147 (164)
                      |++++++
T Consensus       299 t~~ell~  305 (353)
T 2b9h_A          299 TAKEALE  305 (353)
T ss_dssp             CHHHHHT
T ss_pred             CHHHHhc
Confidence            9999987

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.89  E-value=1.8e-23  Score=145.63  Aligned_cols=123  Identities=20%  Similarity=0.252  Sum_probs=88.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.+|.+||+|||+++....  .........||+.|+|||. .....++.++|+||+||++|+|++|..||....
T Consensus       133 p~NIll~~~g~vkL~DFG~a~~~~~--~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~  209 (337)
T 1o6l_A          133 LENLMLDKDGHIKITDFGLCKEGIS--DGATMKTFCGTPEYLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD  209 (337)
T ss_dssp             GGGEEECTTSCEEECCCTTCBCSCC--TTCCBCCCEECGGGCCGGG-GSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             HHHEEECCCCCEEEeeccchhhccc--CCCcccccccChhhCChhh-hcCCCCCchhhcccchhHHHHHhcCCCCCCCCC
Confidence            6899999999999999999876321  1122334578999999954 455668899999999999999999999996421


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCC-----CHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRI-----NAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~vl~  147 (164)
                      .  ....           ..+.....        ..+..+++.+.+++.+||+.||.+||     +++++++
T Consensus       210 ~--~~~~-----------~~i~~~~~--------~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~  260 (337)
T 1o6l_A          210 H--ERLF-----------ELILMEEI--------RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             H--HHHH-----------HHHHHCCC--------CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             H--HHHH-----------HHHHcCCC--------CCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence            1  1110           01111100        11223456689999999999999999     8888876

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.89  E-value=2.5e-23  Score=145.34  Aligned_cols=144  Identities=22%  Similarity=0.187  Sum_probs=92.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||+++.+..  .........+++.|+|||.+.....++.++|+||+||++|++++|..||....
T Consensus       140 p~Nil~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~  217 (346)
T 1ua2_A          140 PNNLLLDENGVLKLADFGLAKSFGS--PNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDS  217 (346)
T ss_dssp             GGGEEECTTCCEEECCCGGGSTTTS--CCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             HHHEEEcCCCCEEEEecccceeccC--CcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCC
Confidence            6899999999999999999986522  22223345689999999766555557889999999999999999999986432


Q ss_pred             cCchhHHHHHHHhhhh---hhHHHhh---hhccc--ccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSV---SVMEVVD---ANLLT--REDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~---~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ... .+..........   ...+...   .....  ...........++..+.+++.+||+.||.+|||++++++
T Consensus       218 ~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  291 (346)
T 1ua2_A          218 DLD-QLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK  291 (346)
T ss_dssp             HHH-HHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             HHH-HHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence            111 111111110000   0000000   00000  000001112344567999999999999999999999987

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.89  E-value=1.6e-23  Score=142.26  Aligned_cols=135  Identities=24%  Similarity=0.395  Sum_probs=95.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||.+...... .........++..|+|||.+ ....++.++|+||+|++++++++ |..||...
T Consensus       137 p~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~el~~~g~~p~~~~  214 (279)
T 1qpc_A          137 AANILVSDTLSCKIADFGLARLIEDN-EYTAREGAKFPIKWTAPEAI-NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM  214 (279)
T ss_dssp             GGGEEECTTSCEEECCCTTCEECSSS-CEECCTTCCCCTTTSCHHHH-HHCEECHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred             HhhEEEcCCCCEEECCCcccccccCc-ccccccCCCCccCccChhhh-ccCCCCchhhhHHHHHHHHHHHhCCCCCCccc
Confidence            68999999999999999999875321 11122234467789999544 45667889999999999999999 89998643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhh
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLF  157 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~  157 (164)
                      ....  ..            ..+.....      ...+..++..+.+++.+||+.||++|||++++++.|+.+.....
T Consensus       215 ~~~~--~~------------~~~~~~~~------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~  272 (279)
T 1qpc_A          215 TNPE--VI------------QNLERGYR------MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE  272 (279)
T ss_dssp             CHHH--HH------------HHHHTTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred             CHHH--HH------------HHHhcccC------CCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhcc
Confidence            2111  10            00111100      01123445668999999999999999999999999999887654

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.89  E-value=3.6e-23  Score=142.54  Aligned_cols=136  Identities=21%  Similarity=0.281  Sum_probs=85.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||++....... ........++..|+|||.+ ....++.++|+||+|+++|++++|..||....
T Consensus       162 p~NIl~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  239 (309)
T 2h34_A          162 PENILVSADDFAYLVDFGIASATTDEK-LTQLGNTVGTLYYMAPERF-SESHATYRADIYALTCVLYECLTGSPPYQGDQ  239 (309)
T ss_dssp             GGGEEECTTSCEEECSCCC-----------------CCGGGCCGGGT-CC----CCCHHHHHHHHHHHHHHSSCSSCSCH
T ss_pred             hHHEEEcCCCCEEEecCccCccccccc-cccccccCCCcCccCHHHH-cCCCCCchHhHHHHHHHHHHHHHCCCCCCCch
Confidence            689999999999999999987652211 1122345688999999544 45667889999999999999999999997431


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCC-CHHHHHHHHHHHHHHh
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRI-NAKEIVTELSKIRDSL  156 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-s~~~vl~~l~~~~~~~  156 (164)
                      ..  ..            ...+...    .......+..++..+.+++.+||+.||++|| |++++++.|+++.+..
T Consensus       240 ~~--~~------------~~~~~~~----~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~  298 (309)
T 2h34_A          240 LS--VM------------GAHINQA----IPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA  298 (309)
T ss_dssp             HH--HH------------HHHHHSC----CCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred             HH--HH------------HHHhccC----CCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence            11  00            0111111    1111122334556689999999999999999 9999999988775443

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.89  E-value=1.1e-23  Score=149.29  Aligned_cols=127  Identities=19%  Similarity=0.240  Sum_probs=85.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.+|.+||+|||+++....  .........||+.|+||| +.....++.++|+||+||++|+|++|..||....
T Consensus       181 p~NILl~~~g~ikL~DFGla~~~~~--~~~~~~~~~gt~~Y~aPE-~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~  257 (396)
T 4dc2_A          181 LDNVLLDSEGHIKLTDYGMCKEGLR--PGDTTSTFCGTPNYIAPE-ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVG  257 (396)
T ss_dssp             GGGEEECTTSCEEECCCTTCBCCCC--TTCCBCCCCBCGGGCCHH-HHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTT
T ss_pred             HHHEEECCCCCEEEeecceeeeccc--CCCccccccCCcccCCch-hhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccc
Confidence            7899999999999999999975321  122234567999999995 4456668899999999999999999999996432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINA  142 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  142 (164)
                      ........     ........+....       ...+..++..+.+++.+||+.||.+||++
T Consensus       258 ~~~~~~~~-----~~~~~~~~i~~~~-------~~~p~~~s~~~~~li~~lL~~dP~~R~~~  307 (396)
T 4dc2_A          258 SSDNPDQN-----TEDYLFQVILEKQ-------IRIPRSLSVKAASVLKSFLNKDPKERLGC  307 (396)
T ss_dssp             C------C-----CHHHHHHHHHHCC-------CCCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred             cccccchh-----hHHHHHHHHhccc-------cCCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence            21110000     0000001111110       11123355668999999999999999996

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.89  E-value=1.3e-23  Score=145.68  Aligned_cols=147  Identities=22%  Similarity=0.400  Sum_probs=98.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCcc-ccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSM-TQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||+++.+....... ......++..|+|||.+ ....++.++|+||+|+++|++++|..|+...
T Consensus       173 p~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~el~tg~~~~~~~  251 (326)
T 2w1i_A          173 TRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESL-TESKFSVASDVWSFGVVLYELFTYIEKSKSP  251 (326)
T ss_dssp             GGGEEEEETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHH-HHCEEEHHHHHHHHHHHHHHHHHTTCGGGSH
T ss_pred             cceEEEcCCCcEEEecCcchhhccccccccccccCCCCceeEECchhh-cCCCCCchhhHHHHHHHHHHHHhcCCCCCCC
Confidence            689999999999999999998763222211 12234467789999554 4556788999999999999999999887532


Q ss_pred             ccCchhHHHHHHHhh-----hhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLL-----SVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRD  154 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~  154 (164)
                      ..   ..........     .......+....      ....+..++..+.+++.+||+.||++|||+.++++.|+++.+
T Consensus       252 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~  322 (326)
T 2w1i_A          252 PA---EFMRMIGNDKQGQMIVFHLIELLKNNG------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD  322 (326)
T ss_dssp             HH---HHHHHHCTTCCTHHHHHHHHHHHHTTC------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HH---HHHHhhccccchhhhHHHHHHHhhcCC------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            10   0000000000     001111111111      111233456679999999999999999999999999999998


Q ss_pred             Hhh
Q 039452          155 SLF  157 (164)
Q Consensus       155 ~~~  157 (164)
                      ++.
T Consensus       323 ~l~  325 (326)
T 2w1i_A          323 QMA  325 (326)
T ss_dssp             HHH
T ss_pred             Hhc
Confidence            875

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.89  E-value=2.3e-23  Score=145.76  Aligned_cols=127  Identities=17%  Similarity=0.237  Sum_probs=81.1

Q ss_pred             CcceEecC---CceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCC
Q 039452            1 PSNVLLDD---NMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         1 p~Nill~~---~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      |+|||++.   ++.+||+|||+++....   ........|++.|+|||. .....++.++||||+||++|++++|..||.
T Consensus       176 p~NIll~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~gt~~y~aPE~-~~~~~~~~~~DiwslG~il~ell~g~~pf~  251 (349)
T 2w4o_A          176 PENLLYATPAPDAPLKIADFGLSKIVEH---QVLMKTVCGTPGYCAPEI-LRGCAYGPEVDMWSVGIITYILLCGFEPFY  251 (349)
T ss_dssp             GGGEEESSSSTTCCEEECCCC-------------------CGGGSCHHH-HTTCCCCTHHHHHHHHHHHHHHHHSSCTTC
T ss_pred             cccEEEecCCCCCCEEEccCccccccCc---ccccccccCCCCccCHHH-hcCCCCCcccchHHHHHHHHHHHhCCCCCC
Confidence            68999975   88999999999986521   112234568999999954 445568899999999999999999999996


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ..........            .+....    ..........++..+.+++.+||+.||++|||+.++++
T Consensus       252 ~~~~~~~~~~------------~i~~~~----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  305 (349)
T 2w4o_A          252 DERGDQFMFR------------RILNCE----YYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ  305 (349)
T ss_dssp             CTTCHHHHHH------------HHHTTC----CCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CCcccHHHHH------------HHHhCC----CccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            4322111111            111111    01111112344566899999999999999999999986

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.89  E-value=1e-23  Score=147.16  Aligned_cols=129  Identities=23%  Similarity=0.390  Sum_probs=83.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhc----------cCcccCccchHhHHHHHHHHH
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGR----------EGRVSTNGDVYSFGIMLMEAF   70 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~----------~~~~~~~~Di~s~g~~~~~~~   70 (164)
                      |+|||++ ++.+||+|||+++.+.............|++.|+|||.+..          ...++.++||||+||++|+|+
T Consensus       136 p~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell  214 (343)
T 3dbq_A          136 PANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT  214 (343)
T ss_dssp             GGGEEEE-TTEEEECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHH
T ss_pred             cceEEEE-CCcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHH
Confidence            6899997 57899999999987632222223345578999999966543          245778999999999999999


Q ss_pred             hcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHH
Q 039452           71 TRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTE  148 (164)
Q Consensus        71 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  148 (164)
                      +|..||..........            ...++....      ...+...+..+.+++.+||+.||.+|||+.++++.
T Consensus       215 ~g~~pf~~~~~~~~~~------------~~~~~~~~~------~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h  274 (343)
T 3dbq_A          215 YGKTPFQQIINQISKL------------HAIIDPNHE------IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  274 (343)
T ss_dssp             HSSCTTTTCCSHHHHH------------HHHHCTTSC------CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             hCCCcchhhhhHHHHH------------HHHhcCCcc------cCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence            9999996432211111            111111110      01112223458899999999999999999999863

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.89  E-value=8.9e-23  Score=143.17  Aligned_cols=131  Identities=17%  Similarity=0.136  Sum_probs=81.6

Q ss_pred             CceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccccCchhHHH
Q 039452            9 NMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKR   88 (164)
Q Consensus         9 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~~~~~~~~~   88 (164)
                      ++.+||+|||+++....     ......|++.|+|||.+ ....++.++||||+||++|++++|..||.....  .....
T Consensus       198 ~~~~kl~DFG~a~~~~~-----~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~~  269 (360)
T 3llt_A          198 STGIKLIDFGCATFKSD-----YHGSIINTRQYRAPEVI-LNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEH--MEHLA  269 (360)
T ss_dssp             CCCEEECCCTTCEETTS-----CCCSCCSCGGGCCHHHH-TTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHH
T ss_pred             CCCEEEEeccCceecCC-----CCcCccCcccccCcHHH-cCCCCCCccchHHHHHHHHHHHHCCCCCCCCcH--HHHHH
Confidence            78899999999986421     12345689999999554 456688999999999999999999999974321  11111


Q ss_pred             HHHHhhhhhhHHHhhhhccc------------cc----chhh-----------hhHHHHHHHHHHHHhhccccCccCCCC
Q 039452           89 WINDLLSVSVMEVVDANLLT------------RE----DRHF-----------AAKQQCVSFVFNLAMECTIESPERRIN  141 (164)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~------------~~----~~~~-----------~~~~~~~~~~~~l~~~cl~~~p~~Rps  141 (164)
                      .+..................            ..    ....           .......+.+.+++.+||+.||.+|||
T Consensus       270 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt  349 (360)
T 3llt_A          270 MMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPS  349 (360)
T ss_dssp             HHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCC
T ss_pred             HHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCC
Confidence            11111111111111110000            00    0000           000111256789999999999999999


Q ss_pred             HHHHHH
Q 039452          142 AKEIVT  147 (164)
Q Consensus       142 ~~~vl~  147 (164)
                      ++++++
T Consensus       350 a~elL~  355 (360)
T 3llt_A          350 PAELLK  355 (360)
T ss_dssp             HHHHTT
T ss_pred             HHHHhc
Confidence            999875

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.89  E-value=1.3e-22  Score=143.70  Aligned_cols=131  Identities=18%  Similarity=0.138  Sum_probs=83.8

Q ss_pred             eEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccccCch----hH
Q 039452           11 VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMFSGEM----TL   86 (164)
Q Consensus        11 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~~~~~----~~   86 (164)
                      .+||+|||.++....     ......||..|+|||.+ ....++.++||||+||++|+|++|..||........    ..
T Consensus       234 ~~kl~DfG~a~~~~~-----~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~  307 (397)
T 1wak_A          234 KVKIADLGNACWVHK-----HFTEDIQTRQYRSLEVL-IGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDH  307 (397)
T ss_dssp             CEEECCGGGCEETTB-----CSCSCCSCGGGCCHHHH-HTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHH
T ss_pred             ceEeccccccccccc-----cCccCCCCCcccCChhh-cCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHH
Confidence            799999999987521     12345689999999554 455688899999999999999999999975433221    11


Q ss_pred             HHHHHHhhhhhhHHHhhhhccccc-----------------------chhhhhHHHHHHHHHHHHhhccccCccCCCCHH
Q 039452           87 KRWINDLLSVSVMEVVDANLLTRE-----------------------DRHFAAKQQCVSFVFNLAMECTIESPERRINAK  143 (164)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~  143 (164)
                      ...+...........+........                       ......+...+..+.+++.+||+.||++|||++
T Consensus       308 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~  387 (397)
T 1wak_A          308 IALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAA  387 (397)
T ss_dssp             HHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHH
T ss_pred             HHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHH
Confidence            111111111111111111100000                       000112345667799999999999999999999


Q ss_pred             HHHH
Q 039452          144 EIVT  147 (164)
Q Consensus       144 ~vl~  147 (164)
                      ++++
T Consensus       388 e~l~  391 (397)
T 1wak_A          388 ECLR  391 (397)
T ss_dssp             HHHT
T ss_pred             HHhh
Confidence            9986

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.89  E-value=1.9e-23  Score=145.33  Aligned_cols=136  Identities=26%  Similarity=0.470  Sum_probs=90.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc-cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS-MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~   78 (164)
                      |+||+++.++.+||+|||+++.+...... .......++..|+|||.+ ....++.++|+||+|+++|++++ |..||..
T Consensus       175 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~ellt~g~~pf~~  253 (333)
T 1mqb_A          175 ARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI-SYRKFTSASDVWSFGIVMWEVMTYGERPYWE  253 (333)
T ss_dssp             GGGEEECTTCCEEECCCCC-----------------CCCGGGSCHHHH-HSCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             hheEEECCCCcEEECCCCcchhhccccccccccCCCCccccccCchhc-ccCCCCchhhhHHHHHHHHHHHcCCCCCccc
Confidence            68999999999999999999875322111 112223457789999544 45668889999999999999998 9999864


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhh
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLF  157 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~  157 (164)
                      .....  ..            ..+.....      ...+..++..+.+++.+||+.||.+|||+.++++.|+.+.+...
T Consensus       254 ~~~~~--~~------------~~~~~~~~------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~  312 (333)
T 1mqb_A          254 LSNHE--VM------------KAINDGFR------LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD  312 (333)
T ss_dssp             CCHHH--HH------------HHHHTTCC------CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred             CCHHH--HH------------HHHHCCCc------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence            32111  00            11111100      01122345668999999999999999999999999999887554

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.88  E-value=1.2e-23  Score=143.37  Aligned_cols=126  Identities=23%  Similarity=0.338  Sum_probs=81.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhh---hccCcccCccchHhHHHHHHHHHhcCCCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEY---GREGRVSTNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~---~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      |+||+++.++.+||+|||.+..+..   ........+++.|+|||.+   .....++.++|+||+|+++|++++|..||.
T Consensus       138 p~Nil~~~~~~~kl~Dfg~~~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~  214 (290)
T 3fme_A          138 PSNVLINALGQVKMCDFGISGYLVD---DVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYD  214 (290)
T ss_dssp             GGGCEECTTCCEEBCCC------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSC
T ss_pred             HHHEEECCCCCEEEeecCCcccccc---cccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCcc
Confidence            6899999999999999999976522   1122334688999999665   345567889999999999999999999996


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ..........            ..........      ....++..+.+++.+||+.||.+|||+.++++
T Consensus       215 ~~~~~~~~~~------------~~~~~~~~~~------~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          215 SWGTPFQQLK------------QVVEEPSPQL------PADKFSAEFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             CCSCHHHHHH------------HHHHSCCCCC------CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             ccCchHHHHH------------HHhccCCCCc------ccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence            4322111111            1111111000      11234556899999999999999999999987

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.88  E-value=1.5e-23  Score=149.68  Aligned_cols=116  Identities=12%  Similarity=0.091  Sum_probs=84.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhh---------ccCcccCccchHhHHHHHHHHHh
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYG---------REGRVSTNGDVYSFGIMLMEAFT   71 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~---------~~~~~~~~~Di~s~g~~~~~~~~   71 (164)
                      |+|||++.++.+||+|||+++....     ......| +.|+|||.+.         ....++.++||||+||++|+|++
T Consensus       239 p~NILl~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ellt  312 (413)
T 3dzo_A          239 PVDIVLDQRGGVFLTGFEHLVRDGA-----SAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWC  312 (413)
T ss_dssp             GGGEEECTTCCEEECCGGGCEETTE-----EECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHH
T ss_pred             cceEEEecCCeEEEEeccceeecCC-----ccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHH
Confidence            7899999999999999999876421     1233456 9999996663         34447789999999999999999


Q ss_pred             cCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           72 RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        72 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      |..||........                 ......        ....++..+.+++.+||+.||++|||+.++++
T Consensus       313 g~~Pf~~~~~~~~-----------------~~~~~~--------~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~  363 (413)
T 3dzo_A          313 ADLPNTDDAALGG-----------------SEWIFR--------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAME  363 (413)
T ss_dssp             SSCCCCTTGGGSC-----------------SGGGGS--------SCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CCCCCCCcchhhh-----------------HHHHHh--------hcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            9999974321110                 000000        01123456899999999999999999888865

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.88  E-value=9.1e-24  Score=144.11  Aligned_cols=135  Identities=20%  Similarity=0.380  Sum_probs=92.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc-cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS-MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~   78 (164)
                      |+||+++.++.+||+|||.+......... .......++..|+|||.+ ....++.++|+||+|+++|++++ |..||..
T Consensus       149 p~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~~g~~p~~~  227 (291)
T 1u46_A          149 ARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL-KTRTFSHASDTWMFGVTLWEMFTYGQEPWIG  227 (291)
T ss_dssp             GGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHH-HHCEEEHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             hheEEEcCCCCEEEccccccccccccccchhhhccCCCCceeeCchhh-cCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence            68999999999999999999876322221 122234567789999544 45667889999999999999999 9999864


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDS  155 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~  155 (164)
                      .....  ..           ..+....      .....+..++..+.+++.+||+.||.+|||+.++++.|.++...
T Consensus       228 ~~~~~--~~-----------~~~~~~~------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~  285 (291)
T 1u46_A          228 LNGSQ--IL-----------HKIDKEG------ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT  285 (291)
T ss_dssp             CCHHH--HH-----------HHHHTSC------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred             CCHHH--HH-----------HHHHccC------CCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence            32111  00           0111100      01112234566689999999999999999999999999887643

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.88  E-value=1.1e-23  Score=142.15  Aligned_cols=132  Identities=25%  Similarity=0.476  Sum_probs=92.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||.+...... .........++..|+|||.+ ....++.++|+||+|+++|++++ |..||...
T Consensus       132 p~Nili~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~  209 (267)
T 3t9t_A          132 ARNCLVGENQVIKVSDFGMTRFVLDD-QYTSSTGTKFPVKWASPEVF-SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR  209 (267)
T ss_dssp             GGGEEECGGGCEEECCTTGGGGBCCH-HHHSTTSTTCCGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             hheEEECCCCCEEEcccccccccccc-cccccccccccccccChhhh-cCCCccchhchhhhHHHHHHHhccCCCCCCCC
Confidence            68999999999999999998764211 11112234567789999554 45567889999999999999999 89998642


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRD  154 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~  154 (164)
                      ....  ..            ..+.....      ...+..++..+.+++.+||+.||.+|||++++++.|.++.+
T Consensus       210 ~~~~--~~------------~~i~~~~~------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (267)
T 3t9t_A          210 SNSE--VV------------EDISTGFR------LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE  264 (267)
T ss_dssp             CHHH--HH------------HHHHTTCC------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CHHH--HH------------HHHhcCCc------CCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            2111  00            00111100      00112334568899999999999999999999999999875

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.88  E-value=3.4e-24  Score=157.38  Aligned_cols=136  Identities=26%  Similarity=0.432  Sum_probs=96.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+|||++.++.+||+|||+++.+... .........++..|+|||.+ ....++.++||||||+++|+|++ |..||...
T Consensus       391 p~NIll~~~~~~kl~DFG~a~~~~~~-~~~~~~~~~~~~~y~aPE~~-~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~  468 (535)
T 2h8h_A          391 AANILVGENLVCKVADFGLARLIEDN-EYTARQGAKFPIKWTAPEAA-LYGRFTIKSDVWSFGILLTELTTKGRVPYPGM  468 (535)
T ss_dssp             GGGEEECGGGCEEECCTTSTTTCCCH-HHHTTCSTTSCGGGSCHHHH-HHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTC
T ss_pred             HhhEEEcCCCcEEEcccccceecCCC-ceecccCCcCcccccCHHHh-ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            68999999999999999999765211 11112233467789999554 45568899999999999999999 89998653


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhhc
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFR  158 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~~  158 (164)
                      ....  .            ...+....      ....+..++..+.+++.+||+.||++|||+++|++.|+.+......
T Consensus       469 ~~~~--~------------~~~i~~~~------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~  527 (535)
T 2h8h_A          469 VNRE--V------------LDQVERGY------RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP  527 (535)
T ss_dssp             CHHH--H------------HHHHHTTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCSC
T ss_pred             CHHH--H------------HHHHHcCC------CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccCc
Confidence            2111  0            01111110      1112234566789999999999999999999999999988765544

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.88  E-value=1e-22  Score=140.92  Aligned_cols=126  Identities=16%  Similarity=0.214  Sum_probs=89.2

Q ss_pred             CcceEecCCc----eEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCC
Q 039452            1 PSNVLLDDNM----VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPT   76 (164)
Q Consensus         1 p~Nill~~~~----~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~   76 (164)
                      |+||+++.++    .+||+|||++......   .......|++.|+|||. .....++.++|+||+|+++|++++|..||
T Consensus       143 p~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~gt~~y~aPE~-~~~~~~~~~~Di~slG~il~~l~~g~~pf  218 (321)
T 2a2a_A          143 PENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPF  218 (321)
T ss_dssp             GGGEEESCTTSSSCCEEECCCTTCEECCTT---CCCCCCCSCGGGCCHHH-HTTCCCCTHHHHHHHHHHHHHHHHSCCSS
T ss_pred             hHHEEEecCCCCcCCEEEccCccceecCcc---ccccccCCCCCccCccc-ccCCCCCCccccHHHHHHHHHHHHCCCCC
Confidence            6899999887    7999999999875321   12234568999999954 45566888999999999999999999999


Q ss_pred             CccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           77 DEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .......  ..           ..+. .   .........+..++..+.+++.+||+.||++|||+.++++
T Consensus       219 ~~~~~~~--~~-----------~~i~-~---~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~  272 (321)
T 2a2a_A          219 LGDTKQE--TL-----------ANIT-S---VSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR  272 (321)
T ss_dssp             CCSSHHH--HH-----------HHHH-T---TCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred             CCCCHHH--HH-----------HHHH-h---cccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            6432111  00           0000 0   0111111222345566899999999999999999999986

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.88  E-value=1.5e-22  Score=143.20  Aligned_cols=73  Identities=23%  Similarity=0.230  Sum_probs=59.2

Q ss_pred             CcceEec--CCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLD--DNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~--~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+|||++  .++.+||+|||+++....     ......+++.|+|||.+ ....++.++||||+||++|+|++|..||..
T Consensus       187 p~NIll~~~~~~~~kL~DFG~a~~~~~-----~~~~~~~t~~y~aPE~~-~~~~~~~~~DiwSlG~il~elltg~~pf~~  260 (382)
T 2vx3_A          187 PENILLCNPKRSAIKIVDFGSSCQLGQ-----RIYQYIQSRFYRSPEVL-LGMPYDLAIDMWSLGCILVEMHTGEPLFSG  260 (382)
T ss_dssp             GGGEEESSTTSCCEEECCCTTCEETTC-----CCCSSCSCGGGCCHHHH-TTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cccEEEecCCCCcEEEEeccCceeccc-----ccccccCCccccChHHH-cCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            6899995  578899999999987521     12345688999999554 455688999999999999999999999975


Q ss_pred             c
Q 039452           79 M   79 (164)
Q Consensus        79 ~   79 (164)
                      .
T Consensus       261 ~  261 (382)
T 2vx3_A          261 A  261 (382)
T ss_dssp             S
T ss_pred             C
Confidence            3

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.88  E-value=3.7e-23  Score=146.42  Aligned_cols=126  Identities=16%  Similarity=0.163  Sum_probs=88.3

Q ss_pred             CcceEecC--CceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDD--NMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+|||++.  ++.+||+|||+++.+..   ........+++.|+||| +.....++.++||||+||++|+|++|..||..
T Consensus       177 p~NIll~~~~~~~vkL~DFG~a~~~~~---~~~~~~~~gt~~y~aPE-~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~  252 (387)
T 1kob_A          177 PENIMCETKKASSVKIIDFGLATKLNP---DEIVKVTTATAEFAAPE-IVDREPVGFYTDMWAIGVLGYVLLSGLSPFAG  252 (387)
T ss_dssp             GGGEEESSTTCCCEEECCCTTCEECCT---TSCEEEECSSGGGCCHH-HHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred             hHHeEEecCCCCceEEEecccceecCC---CcceeeeccCCCccCch-hccCCCCCCcccEeeHhHHHHHHHhCCCCCCC
Confidence            68999974  57899999999987522   11223456899999995 44556688899999999999999999999974


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ...  ....           ..+.. ..   ..........++..+.+++.+||..||.+|||+.++++
T Consensus       253 ~~~--~~~~-----------~~i~~-~~---~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  304 (387)
T 1kob_A          253 EDD--LETL-----------QNVKR-CD---WEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE  304 (387)
T ss_dssp             SSH--HHHH-----------HHHHH-CC---CCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             CCH--HHHH-----------HHHHh-CC---CCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence            321  1100           00110 00   00111112345666899999999999999999999986

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.88  E-value=6e-23  Score=144.14  Aligned_cols=143  Identities=20%  Similarity=0.214  Sum_probs=86.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||.++...   .........++..|+|||.+.....++.++|+||+||++|++++|..||....
T Consensus       162 p~NIl~~~~~~~kl~Dfg~~~~~~---~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~  238 (362)
T 3pg1_A          162 PGNILLADNNDITICDFNLAREDT---ADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGST  238 (362)
T ss_dssp             GGGEEECTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             hHHEEEcCCCCEEEEecCcccccc---cccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCC
Confidence            689999999999999999997542   12223345688999999766655678899999999999999999999997532


Q ss_pred             cCchhHHHHHHHhhhh-----------hhHHHhhhhcccc-cchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSV-----------SVMEVVDANLLTR-EDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ... ............           ...+.+....... ..........+++.+.+++.+||+.||.+|||++++++
T Consensus       239 ~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  316 (362)
T 3pg1_A          239 FYN-QLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR  316 (362)
T ss_dssp             HHH-HHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHH-HHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence            111 111111110000           0111111111111 11111222345667899999999999999999999986

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.88  E-value=4e-23  Score=146.37  Aligned_cols=142  Identities=17%  Similarity=0.269  Sum_probs=89.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCC-----ccccccccccccccCchhhhcc-CcccCccchHhHHHHHHHHHhcCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQ-----SMTQTQTLATIGYMAPVEYGRE-GRVSTNGDVYSFGIMLMEAFTRKK   74 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~~~-~~~~~~~Di~s~g~~~~~~~~g~~   74 (164)
                      |+|||++.++.+||+|||.+........     ........|+..|+|||.+... ..++.++||||+||++|+|++|..
T Consensus       156 p~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~  235 (389)
T 3gni_B          156 ASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHV  235 (389)
T ss_dssp             GGGEEECTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred             HHHEEEcCCCCEEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCC
Confidence            6899999999999999998865422111     1112234688899999666543 458889999999999999999999


Q ss_pred             CCCccccCchhHHHHHHHhhhhhhHHHhhhh-----------------------c-------ccccchhhhhHHHHHHHH
Q 039452           75 PTDEMFSGEMTLKRWINDLLSVSVMEVVDAN-----------------------L-------LTREDRHFAAKQQCVSFV  124 (164)
Q Consensus        75 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~-------~~~~~~~~~~~~~~~~~~  124 (164)
                      ||...............     ......+..                       .       ..........+..+++.+
T Consensus       236 pf~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  310 (389)
T 3gni_B          236 PFKDMPATQMLLEKLNG-----TVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHF  310 (389)
T ss_dssp             TTTTCCSTTHHHHC-------------------------------------------------------------CCHHH
T ss_pred             CCCCCCHHHHHHHHhcC-----CCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHH
Confidence            99764333321111100     000000000                       0       000011112234556779


Q ss_pred             HHHHhhccccCccCCCCHHHHHH
Q 039452          125 FNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus       125 ~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .+++.+||+.||++|||++++++
T Consensus       311 ~~li~~~L~~dP~~Rpta~ell~  333 (389)
T 3gni_B          311 HHFVEQCLQRNPDARPSASTLLN  333 (389)
T ss_dssp             HHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             HHHHHHHhhcCcccCCCHHHHhc
Confidence            99999999999999999999985

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.88  E-value=1.8e-23  Score=146.29  Aligned_cols=122  Identities=23%  Similarity=0.327  Sum_probs=87.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhh--ccCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYG--REGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~--~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+|||++.++.+||+|||+++.+..      .....|++.|+|||.+.  ....++.++||||+||++|++++|..||..
T Consensus       182 p~NIll~~~~~~kL~DfG~a~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~  255 (348)
T 1u5q_A          182 AGNILLSEPGLVKLGDFGSASIMAP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN  255 (348)
T ss_dssp             GGGEEEETTTEEEECCCTTCBSSSS------BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             HHHEEECCCCCEEEeeccCceecCC------CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            6899999999999999999876521      12356899999997664  245688899999999999999999999864


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ......             ...+......      ...+..++..+.+++.+||+.||.+|||++++++
T Consensus       256 ~~~~~~-------------~~~~~~~~~~------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~  305 (348)
T 1u5q_A          256 MNAMSA-------------LYHIAQNESP------ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK  305 (348)
T ss_dssp             SCHHHH-------------HHHHHHSCCC------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CChHHH-------------HHHHHhcCCC------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence            321110             0011111100      0011234556889999999999999999999875

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.88  E-value=4.9e-23  Score=145.55  Aligned_cols=126  Identities=21%  Similarity=0.323  Sum_probs=88.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhc--cCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGR--EGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~--~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+|||++.+|.+||+|||++..+..   ........||+.|+|||.+..  ...++.++|+||+||++|+|++|..||..
T Consensus       143 p~NIll~~~g~vkL~DFG~a~~~~~---~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~  219 (384)
T 4fr4_A          143 PDNILLDEHGHVHITDFNIAAMLPR---ETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHI  219 (384)
T ss_dssp             GGGEEECTTSCEEECCCTTCEECCT---TCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             HHHeEECCCCCEEEeccceeeeccC---CCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCC
Confidence            6899999999999999999987532   222345679999999966643  33478899999999999999999999974


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCC-HHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRIN-AKEIVT  147 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-~~~vl~  147 (164)
                      .......  ....         .+....       ...+..++..+.+++.+||+.||.+||+ ++++++
T Consensus       220 ~~~~~~~--~~~~---------~~~~~~-------~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          220 RSSTSSK--EIVH---------TFETTV-------VTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             CTTSCHH--HHHH---------HHHHCC-------CCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred             CCCccHH--HHHH---------HHhhcc-------cCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence            3322211  1000         000000       0112234566899999999999999998 666654

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.88  E-value=5.7e-23  Score=142.64  Aligned_cols=144  Identities=19%  Similarity=0.145  Sum_probs=86.0

Q ss_pred             CcceEec-----CCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCC
Q 039452            1 PSNVLLD-----DNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKP   75 (164)
Q Consensus         1 p~Nill~-----~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p   75 (164)
                      |+|||++     ..+.+||+|||+++.+.  ..........++..|+|||.+.....++.++||||+||++|++++|..|
T Consensus       160 p~NIll~~~~~~~~~~~kl~Dfg~a~~~~--~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~p  237 (329)
T 3gbz_A          160 PQNLLLSVSDASETPVLKIGDFGLARAFG--IPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPL  237 (329)
T ss_dssp             GGGEEEEC-----CCEEEECCTTHHHHHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             HHHEEEecCCCCccceEEECcCCCccccC--CcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence            6899994     45669999999997652  1222233456799999997666556688999999999999999999999


Q ss_pred             CCccccCchhHHHHHHHhhhhh---hHHHhh-----hh--cccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHH
Q 039452           76 TDEMFSGEMTLKRWINDLLSVS---VMEVVD-----AN--LLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEI  145 (164)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~~--~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v  145 (164)
                      |....... .............   ......     ..  ..............++..+.+++.+||+.||.+|||++++
T Consensus       238 f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~  316 (329)
T 3gbz_A          238 FPGDSEID-QLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNA  316 (329)
T ss_dssp             SCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             cCCCCHHH-HHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHH
Confidence            97532211 1111111000000   000000     00  0000011111223356778999999999999999999999


Q ss_pred             HH
Q 039452          146 VT  147 (164)
Q Consensus       146 l~  147 (164)
                      ++
T Consensus       317 l~  318 (329)
T 3gbz_A          317 LE  318 (329)
T ss_dssp             HT
T ss_pred             hC
Confidence            86

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.88  E-value=6e-23  Score=143.76  Aligned_cols=140  Identities=18%  Similarity=0.162  Sum_probs=89.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||+++....     ......++..|+|||.+.....++.++|+||+|+++|++++|..||....
T Consensus       154 p~NIl~~~~~~~kl~Dfg~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~  228 (353)
T 3coi_A          154 PGNLAVNEDCELKILDFGLARHADA-----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD  228 (353)
T ss_dssp             GGGEEECTTCCEEECSTTCTTC-------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSC
T ss_pred             HHHEeECCCCcEEEeecccccCCCC-----CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999876421     12345678999999766554668899999999999999999999997532


Q ss_pred             cCchhHHHHHHHhhhhhhHH------------HhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVME------------VVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ... .+.... ........+            .+.................++..+.+++.+||+.||.+|||++++++
T Consensus       229 ~~~-~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  305 (353)
T 3coi_A          229 YLD-QLTQIL-KVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  305 (353)
T ss_dssp             HHH-HHHHHH-HHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             HHH-HHHHHH-HHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            111 111111 111111111            11111000011111122345677999999999999999999999986

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.88  E-value=3.8e-23  Score=142.48  Aligned_cols=135  Identities=21%  Similarity=0.363  Sum_probs=84.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc-cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS-MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||+++.+...... .......|++.|+|||.+ ....++.++||||+|+++|++++|..||...
T Consensus       144 p~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~  222 (311)
T 3ork_A          144 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA-RGDSVDARSDVYSLGCVLYEVLTGEPPFTGD  222 (311)
T ss_dssp             GGGEEEETTSCEEECCCSCC------------------CCTTCCHHHH-HTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             HHHEEEcCCCCEEEeeccCcccccccccccccccccCcCcccCCHHHh-cCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence            68999999999999999999765322111 122335689999999554 4556888999999999999999999999643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHH-HHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAK-EIVTELSKIR  153 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~-~vl~~l~~~~  153 (164)
                      .......             ....    ............++..+.+++.+||+.||.+||++. ++...+.++.
T Consensus       223 ~~~~~~~-------------~~~~----~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~  280 (311)
T 3ork_A          223 SPVSVAY-------------QHVR----EDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH  280 (311)
T ss_dssp             SHHHHHH-------------HHHH----CCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             ChHHHHH-------------HHhc----CCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence            2111100             0011    111111222234566789999999999999999655 4555555544

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.88  E-value=1e-22  Score=138.37  Aligned_cols=130  Identities=23%  Similarity=0.354  Sum_probs=92.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||.+..+....   ......+++.|+|||.+ ....++.++|+||+|+++|++++|..|+... 
T Consensus       150 p~Nil~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-  224 (284)
T 2a19_B          150 PSNIFLVDTKQVKIGDFGLVTSLKNDG---KRTRSKGTLRYMSPEQI-SSQDYGKEVDLYALGLILAELLHVCDTAFET-  224 (284)
T ss_dssp             GGGEEEEETTEEEECCCTTCEESSCCS---CCCCCCSCCTTSCHHHH-HCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH-
T ss_pred             HHHEEEcCCCCEEECcchhheeccccc---cccccCCcccccChhhh-ccCCCcchhhhHHHHHHHHHHHhcCCcchhH-
Confidence            689999999999999999988753221   22345688999999544 4566788999999999999999998876311 


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhhcc
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRN  159 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~~~  159 (164)
                            ..         ....+.....         +..++..+.+++.+||+.||.+|||+.++++.|..+.+....+
T Consensus       225 ------~~---------~~~~~~~~~~---------~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~~  279 (284)
T 2a19_B          225 ------SK---------FFTDLRDGII---------SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKN  279 (284)
T ss_dssp             ------HH---------HHHHHHTTCC---------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-----
T ss_pred             ------HH---------HHHHhhcccc---------cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCcc
Confidence                  00         0000111110         1223455889999999999999999999999999998777654

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.88  E-value=3.7e-23  Score=143.47  Aligned_cols=126  Identities=18%  Similarity=0.268  Sum_probs=86.7

Q ss_pred             CcceEecC---CceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCC
Q 039452            1 PSNVLLDD---NMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         1 p~Nill~~---~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      |+||+++.   ++.+||+|||+++.+..   ........+++.|+||| +.....++.++|+||+|+++|++++|..||.
T Consensus       159 p~NIl~~~~~~~~~~kL~Dfg~a~~~~~---~~~~~~~~gt~~y~aPE-~~~~~~~~~~~DiwslG~il~~ll~g~~pf~  234 (327)
T 3lm5_A          159 PQNILLSSIYPLGDIKIVDFGMSRKIGH---ACELREIMGTPEYLAPE-ILNYDPITTATDMWNIGIIAYMLLTHTSPFV  234 (327)
T ss_dssp             GGGEEESCBTTBCCEEECCGGGCEEC------------CCCGGGCCHH-HHTTCCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             hHHEEEecCCCCCcEEEeeCccccccCC---ccccccccCCcCccCCe-eecCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence            68999987   78999999999987522   11223456899999995 4456668889999999999999999999996


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .......  .           ..+...    ...........++..+.+++.+||+.||.+|||++++++
T Consensus       235 ~~~~~~~--~-----------~~i~~~----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~  287 (327)
T 3lm5_A          235 GEDNQET--Y-----------LNISQV----NVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS  287 (327)
T ss_dssp             CSSHHHH--H-----------HHHHHT----CCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             CCCchHH--H-----------HHHHhc----ccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence            4321110  0           000000    111111222345566899999999999999999999976

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.88  E-value=6.3e-23  Score=139.55  Aligned_cols=126  Identities=21%  Similarity=0.242  Sum_probs=88.0

Q ss_pred             CcceEecCCce---EEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCC
Q 039452            1 PSNVLLDDNMV---AHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         1 p~Nill~~~~~---~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      |+||+++.++.   +||+|||.+.....   ........+++.|+|||. .....++.++|+||+|+++|++++|..||.
T Consensus       133 p~Nil~~~~~~~~~~kl~Dfg~~~~~~~---~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~slG~~l~~l~~g~~pf~  208 (284)
T 3kk8_A          133 PENLLLASKAKGAAVKLADFGLAIEVND---SEAWHGFAGTPGYLSPEV-LKKDPYSKPVDIWACGVILYILLVGYPPFW  208 (284)
T ss_dssp             GGGEEESSSSTTCCEEECCCTTCEECCS---SCBCCCSCSCGGGCCHHH-HTTCCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             HHHEEEecCCCCCcEEEeeceeeEEccc---CccccCCCCCcCCcCchh-hcCCCCCcccchHHHHHHHHHHHHCCCCCC
Confidence            68999976544   99999999977522   122234568999999954 455668899999999999999999999996


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ......  ..            ..+...   ...........+++.+.+++.+||+.||++|||++++++
T Consensus       209 ~~~~~~--~~------------~~~~~~---~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (284)
T 3kk8_A          209 DEDQHR--LY------------AQIKAG---AYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK  261 (284)
T ss_dssp             CSSHHH--HH------------HHHHHT---CCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CCchhH--HH------------HHHHhc---cccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            432111  10            001111   111111122344566899999999999999999999987

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.88  E-value=2.5e-23  Score=155.81  Aligned_cols=134  Identities=22%  Similarity=0.398  Sum_probs=93.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+|||++.++.+||+|||+++.+.... ........+++.|+|||.+ ....++.++||||+|+++|++++ |..||...
T Consensus       519 p~NILl~~~~~vkL~DFG~a~~~~~~~-~~~~~~~~~t~~y~aPE~~-~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~  596 (656)
T 2j0j_A          519 ARNVLVSSNDCVKLGDFGLSRYMEDST-YYKASKGKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGV  596 (656)
T ss_dssp             GGGEEEEETTEEEECCCCCCCSCCC-----------CCGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             hHhEEEeCCCCEEEEecCCCeecCCCc-ceeccCCCCCcceeCHHHh-cCCCCCchhhHHHHHHHHHHHHHcCCCCCCCC
Confidence            689999999999999999998753221 1122234567889999554 45568889999999999999996 89998743


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHh
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL  156 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~  156 (164)
                      ....  ...           .+.. ..      ....+..+++.+.+++.+||+.||.+|||+.++++.|.++.+..
T Consensus       597 ~~~~--~~~-----------~i~~-~~------~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~  653 (656)
T 2j0j_A          597 KNND--VIG-----------RIEN-GE------RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE  653 (656)
T ss_dssp             CHHH--HHH-----------HHHH-TC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             CHHH--HHH-----------HHHc-CC------CCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence            2111  100           0111 00      01122345667899999999999999999999999999997654

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.88  E-value=3.8e-23  Score=149.69  Aligned_cols=123  Identities=24%  Similarity=0.314  Sum_probs=89.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||++..+...   .......|++.|+|||.+......+.++|+||+||++|++++|..||....
T Consensus       144 p~NIll~~~~~vkL~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~  220 (476)
T 2y94_A          144 PENVLLDAHMNAKIADFGLSNMMSDG---EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH  220 (476)
T ss_dssp             GGGEEECTTCCEEECCCSSCEECCTT---CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             HHHEEEecCCCeEEEeccchhhcccc---ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCC
Confidence            68999999999999999999875321   122345689999999666544445678999999999999999999997432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ...  ..           ..+.+.. .       ..+..+++.+.+++.+||+.||.+|||++++++
T Consensus       221 ~~~--~~-----------~~i~~~~-~-------~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~  266 (476)
T 2y94_A          221 VPT--LF-----------KKICDGI-F-------YTPQYLNPSVISLLKHMLQVDPMKRATIKDIRE  266 (476)
T ss_dssp             SHH--HH-----------HHHHTTC-C-------CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHH--HH-----------HHHhcCC-c-------CCCccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence            111  10           0111111 0       112234556899999999999999999999987

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.88  E-value=1e-23  Score=147.66  Aligned_cols=123  Identities=21%  Similarity=0.276  Sum_probs=84.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||+++...  ..........||+.|+|||.+ ....++.++|+||+||++|+|++|..||....
T Consensus       152 p~NILl~~~g~ikL~DFG~a~~~~--~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~  228 (353)
T 3txo_A          152 LDNVLLDHEGHCKLADFGMCKEGI--CNGVTTATFCGTPDYIAPEIL-QEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN  228 (353)
T ss_dssp             GGGEEECTTSCEEECCCTTCBCSC--C---------CCGGGCCHHHH-HHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             HHHEEECCCCCEEEccccceeecc--cCCccccccCCCcCeEChhhc-CCCCcCCccCCCcchHHHHHHHhCCCCCCCCC
Confidence            789999999999999999987532  112223445789999999544 45567889999999999999999999997432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCH------HHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINA------KEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~------~~vl~  147 (164)
                      ...  ..           ..+.....        ..+..++..+.+++.+||+.||.+||++      +++++
T Consensus       229 ~~~--~~-----------~~i~~~~~--------~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~  280 (353)
T 3txo_A          229 EDD--LF-----------EAILNDEV--------VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR  280 (353)
T ss_dssp             HHH--HH-----------HHHHHCCC--------CCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred             HHH--HH-----------HHHHcCCC--------CCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence            111  10           11111110        1122345568899999999999999998      66654

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.88  E-value=2.3e-23  Score=149.98  Aligned_cols=123  Identities=20%  Similarity=0.256  Sum_probs=88.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||+++....  .........||+.|+|||. .....++.++|+||+||++|+|++|..||....
T Consensus       277 p~NIll~~~~~~kl~DFG~a~~~~~--~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~  353 (446)
T 4ejn_A          277 LENLMLDKDGHIKITDFGLCKEGIK--DGATMKTFCGTPEYLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD  353 (446)
T ss_dssp             GGGEEECSSSCEEECCCCCCCTTCC-------CCSSSCGGGCCHHH-HHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             HHHEEECCCCCEEEccCCCceeccC--CCcccccccCCccccCHhh-cCCCCCCCccchhhhHHHHHHHhhCCCCCCCCC
Confidence            6899999999999999999875421  1222344678999999954 456668899999999999999999999996432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCC-----CHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRI-----NAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~vl~  147 (164)
                      ...  ...           .+.....        ..+..+++.+.+++.+||+.||.+||     |++++++
T Consensus       354 ~~~--~~~-----------~i~~~~~--------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~  404 (446)
T 4ejn_A          354 HEK--LFE-----------LILMEEI--------RFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ  404 (446)
T ss_dssp             HHH--HHH-----------HHHHCCC--------CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             HHH--HHH-----------HHHhCCC--------CCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence            111  100           0111000        01223456689999999999999999     9999886

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.88  E-value=3.4e-23  Score=147.12  Aligned_cols=151  Identities=17%  Similarity=0.186  Sum_probs=99.7

Q ss_pred             CcceEe----cCCceEEEeccccceeccCCCCccccccccccccccCchhhhcc-------CcccCccchHhHHHHHHHH
Q 039452            1 PSNVLL----DDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGRE-------GRVSTNGDVYSFGIMLMEA   69 (164)
Q Consensus         1 p~Nill----~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-------~~~~~~~Di~s~g~~~~~~   69 (164)
                      |+|||+    +.++.+||+|||+++.+..   ........|+..|+|||.+...       ..++.++|+||+||++|++
T Consensus       140 p~NIll~~~~~~~~~~kL~DFG~a~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el  216 (396)
T 4eut_A          140 PGNIMRVIGEDGQSVYKLTDFGAARELED---DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHA  216 (396)
T ss_dssp             GGGEEEEECTTSCEEEEECCGGGCEECCC---GGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHEEEeecCCCceeEEEecCCCceEccC---CCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHH
Confidence            689999    7888899999999987522   1222345689999999665431       4567889999999999999


Q ss_pred             HhcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhc---------ccccchhhhhHHHHHHHHHHHHhhccccCccCCC
Q 039452           70 FTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANL---------LTREDRHFAAKQQCVSFVFNLAMECTIESPERRI  140 (164)
Q Consensus        70 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp  140 (164)
                      ++|..||.......... ..+................         .............++..+.+++.+||..||++||
T Consensus       217 ~tg~~Pf~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~  295 (396)
T 4eut_A          217 ATGSLPFRPFEGPRRNK-EVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCW  295 (396)
T ss_dssp             HHSSCSEECTTCTTTCH-HHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSC
T ss_pred             HHCCCCCCCCCcccchH-HHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhc
Confidence            99999996533222111 1111111111111000000         0000111222356677789999999999999999


Q ss_pred             CHHHHHHHHHHHHHH
Q 039452          141 NAKEIVTELSKIRDS  155 (164)
Q Consensus       141 s~~~vl~~l~~~~~~  155 (164)
                      |++++++.+..+.+.
T Consensus       296 s~~e~l~~l~~il~~  310 (396)
T 4eut_A          296 GFDQFFAETSDILHR  310 (396)
T ss_dssp             CHHHHHHHHHHHHTC
T ss_pred             cHHHHHHHHHHHhhc
Confidence            999999999888754

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.88  E-value=1.6e-23  Score=145.22  Aligned_cols=134  Identities=18%  Similarity=0.214  Sum_probs=74.3

Q ss_pred             CcceEecCCc---eEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCC
Q 039452            1 PSNVLLDDNM---VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         1 p~Nill~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      |+|||++.++   .+||+|||+++....  .........++..|+||| +.....++.++|+||+|+++|++++|..||.
T Consensus       134 p~NIll~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~~~t~~y~aPE-~~~~~~~~~~~DiwslG~il~~ll~g~~pf~  210 (325)
T 3kn6_A          134 PENLLFTDENDNLEIKIIDFGFARLKPP--DNQPLKTPCFTLHYAAPE-LLNQNGYDESCDLWSLGVILYTMLSGQVPFQ  210 (325)
T ss_dssp             GGGEEEEC----CEEEECCCTTCEECCC-------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC
T ss_pred             HHHEEEecCCCcccEEEeccccceecCC--CCCcccccCCCcCccCHH-HhcCCCCCCccchHHHHHHHHHHHhCCCCCC
Confidence            6899997665   899999999986522  122233456799999995 4455668889999999999999999999997


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .......          .....+...................++..+.+++.+||+.||.+|||++++++
T Consensus       211 ~~~~~~~----------~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  270 (325)
T 3kn6_A          211 SHDRSLT----------CTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY  270 (325)
T ss_dssp             -----------------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred             CCccccc----------cccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence            5322110          00011111111111111122223445677999999999999999999998873

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.88  E-value=3.1e-23  Score=144.02  Aligned_cols=134  Identities=19%  Similarity=0.238  Sum_probs=80.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCcc----------ccccccccccccCchhhh--ccCcccCccchHhHHHHHHH
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSM----------TQTQTLATIGYMAPVEYG--REGRVSTNGDVYSFGIMLME   68 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~----------~~~~~~~~~~~~~pe~~~--~~~~~~~~~Di~s~g~~~~~   68 (164)
                      |+|||++.++.+||+|||+++.+.......          ......+++.|+|||.+.  ....++.++||||+|+++|+
T Consensus       166 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~e  245 (337)
T 3ll6_A          166 VENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYL  245 (337)
T ss_dssp             GGGCEECTTSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHH
T ss_pred             cccEEECCCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHH
Confidence            689999999999999999998753211110          111345889999996552  34557789999999999999


Q ss_pred             HHhcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHH
Q 039452           69 AFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTE  148 (164)
Q Consensus        69 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  148 (164)
                      +++|..||.......                 .........      .....+..+.+++.+||+.||.+|||+.++++.
T Consensus       246 l~~g~~p~~~~~~~~-----------------~~~~~~~~~------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  302 (337)
T 3ll6_A          246 LCFRQHPFEDGAKLR-----------------IVNGKYSIP------PHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQ  302 (337)
T ss_dssp             HHHSSCCC-----------------------------CCCC------TTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             HHhCCCCCcchhHHH-----------------hhcCcccCC------cccccchHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            999999996421110                 111100000      011122337789999999999999999999999


Q ss_pred             HHHHHHHhh
Q 039452          149 LSKIRDSLF  157 (164)
Q Consensus       149 l~~~~~~~~  157 (164)
                      |..+.+...
T Consensus       303 l~~~~~~~~  311 (337)
T 3ll6_A          303 LQEIAAARN  311 (337)
T ss_dssp             HHHHHHHTT
T ss_pred             HHHHHhccC
Confidence            999987543

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.88  E-value=4.3e-23  Score=139.34  Aligned_cols=127  Identities=24%  Similarity=0.343  Sum_probs=90.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCccc---CccchHhHHHHHHHHHhcCCCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVS---TNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~---~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      |+||+++.++.++|+|||+....       ......+++.|+|||.+. ....+   .++||||+|+++|++++|..||.
T Consensus       141 p~Nil~~~~~~~~l~~~~~~~~~-------~~~~~~~t~~y~aPE~~~-~~~~~~~~~~~Di~slG~il~el~~g~~p~~  212 (271)
T 3kmu_A          141 SRSVMIDEDMTARISMADVKFSF-------QSPGRMYAPAWVAPEALQ-KKPEDTNRRSADMWSFAVLLWELVTREVPFA  212 (271)
T ss_dssp             GGGEEECTTSCEEEEGGGSCCTT-------SCTTCBSCGGGSCHHHHH-SCGGGSCHHHHHHHHHHHHHHHHHHCSCTTT
T ss_pred             cceEEEcCCcceeEEeccceeee-------cccCccCCccccChhhhc-cCCCCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence            68999999999999988876542       112346789999996554 33333   37999999999999999999997


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHH
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRD  154 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~  154 (164)
                      ........             ........      ....+..++..+.+++.+||+.||.+|||++++++.|..+.+
T Consensus       213 ~~~~~~~~-------------~~~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~  270 (271)
T 3kmu_A          213 DLSNMEIG-------------MKVALEGL------RPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD  270 (271)
T ss_dssp             TSCHHHHH-------------HHHHHSCC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred             ccChHHHH-------------HHHHhcCC------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence            43211110             01111110      011223455668999999999999999999999999998864

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.88  E-value=3.7e-23  Score=144.46  Aligned_cols=127  Identities=19%  Similarity=0.246  Sum_probs=84.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.+|.+||+|||+++.....  ........|++.|+|||.+ ....++.++|+||+||++|+|++|..||....
T Consensus       138 p~NIll~~~g~~kL~DFG~a~~~~~~--~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  214 (345)
T 3a8x_A          138 LDNVLLDSEGHIKLTDYGMCKEGLRP--GDTTSTFCGTPNYIAPEIL-RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVG  214 (345)
T ss_dssp             GGGEEECTTSCEEECCGGGCBCSCCT--TCCBCCCCSCGGGCCHHHH-TTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTT
T ss_pred             HHHEEECCCCCEEEEeccccccccCC--CCcccccCCCccccCcccc-CCCCCChHHhHHHHHHHHHHHHhCCCCcCCcc
Confidence            78999999999999999999764211  1223445789999999554 45668899999999999999999999996532


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINA  142 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  142 (164)
                      ........     ........+....       ...+..++..+.+++.+||+.||.+||++
T Consensus       215 ~~~~~~~~-----~~~~~~~~i~~~~-------~~~p~~~s~~~~~li~~lL~~dP~~R~~~  264 (345)
T 3a8x_A          215 SSDNPDQN-----TEDYLFQVILEKQ-------IRIPRSLSVKAASVLKSFLNKDPKERLGC  264 (345)
T ss_dssp             C------------CHHHHHHHHHHCC-------CCCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred             cccccccc-----cHHHHHHHHHcCC-------CCCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence            21110000     0000001111110       01123345668999999999999999996

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.88  E-value=4.1e-23  Score=147.03  Aligned_cols=79  Identities=19%  Similarity=0.263  Sum_probs=56.8

Q ss_pred             CcceEe----cCCceEEEeccccceeccCCCC-ccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCC
Q 039452            1 PSNVLL----DDNMVAHLSDFGIAKLLIGEDQ-SMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKP   75 (164)
Q Consensus         1 p~Nill----~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p   75 (164)
                      |+|||+    +.++.+||+|||+++.+..... ........||+.|+|||.+.....++.++||||+||++|+|++|..|
T Consensus       156 p~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~p  235 (405)
T 3rgf_A          156 PANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPI  235 (405)
T ss_dssp             GGGEEECCSSTTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred             HHHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCC
Confidence            689999    6778999999999987532111 12233457899999997666556688999999999999999999999


Q ss_pred             CCcc
Q 039452           76 TDEM   79 (164)
Q Consensus        76 ~~~~   79 (164)
                      |...
T Consensus       236 f~~~  239 (405)
T 3rgf_A          236 FHCR  239 (405)
T ss_dssp             TCCC
T ss_pred             CCCc
Confidence            9643

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.88  E-value=4.4e-23  Score=144.90  Aligned_cols=130  Identities=22%  Similarity=0.274  Sum_probs=78.6

Q ss_pred             CcceEecCCce--EEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDDNMV--AHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~--~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+|||++.++.  +||+|||+++...   .........|++.|+|||.+......+.++||||+||++|++++|..||..
T Consensus       144 p~Nill~~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~  220 (361)
T 3uc3_A          144 LENTLLDGSPAPRLKICDFGYSKSSV---LHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFED  220 (361)
T ss_dssp             GGGEEECSSSSCCEEECCCCCC------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC-
T ss_pred             HHHEEEcCCCCceEEEeecCcccccc---ccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCC
Confidence            68999987665  9999999987531   112233456899999996665444344558999999999999999999975


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTE  148 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  148 (164)
                      ....... ...+.        .+.....      ..+....+++.+.+++.+||+.||.+|||+.++++.
T Consensus       221 ~~~~~~~-~~~~~--------~~~~~~~------~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h  275 (361)
T 3uc3_A          221 PEEPRDY-RKTIQ--------RILSVKY------SIPDDIRISPECCHLISRIFVADPATRISIPEIKTH  275 (361)
T ss_dssp             ---CCCH-HHHHH--------HHHTTCC------CCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             CccHHHH-HHHHH--------HHhcCCC------CCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence            3322211 11111        1111100      011111345568899999999999999999999863

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.88  E-value=1.4e-22  Score=139.87  Aligned_cols=146  Identities=15%  Similarity=0.200  Sum_probs=91.6

Q ss_pred             CcceEec-CCceEEEeccccceeccCCCC-ccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLD-DNMVAHLSDFGIAKLLIGEDQ-SMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~-~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+||+++ .++.+||+|||.++....... ........++..|+|||.+.....++.++|+||+|+++|++++|..||..
T Consensus       148 p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~  227 (320)
T 2i6l_A          148 PANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAG  227 (320)
T ss_dssp             GGGEEEETTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             HHHEEEcCCCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCC
Confidence            6899997 567999999999986521111 11223445788999997776556788899999999999999999999975


Q ss_pred             cccCchhHHHHHHHhhh---hhhH-------HHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLS---VSVM-------EVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~---~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ..... ...........   ....       ..++................++..+.+++.+||+.||.+|||++++++
T Consensus       228 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (320)
T 2i6l_A          228 AHELE-QMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS  305 (320)
T ss_dssp             SSHHH-HHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             CCHHH-HHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence            32211 11111110000   0000       001111111111111222345677999999999999999999999986

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.88  E-value=1.2e-22  Score=147.66  Aligned_cols=125  Identities=18%  Similarity=0.225  Sum_probs=87.0

Q ss_pred             CcceEec---CCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCC
Q 039452            1 PSNVLLD---DNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         1 p~Nill~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      |+|||++   .++.+||+|||+++.+..   ........|++.|+|||.+. + .++.++||||+||++|++++|..||.
T Consensus       149 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~gt~~y~aPE~~~-~-~~~~~~DiwslG~il~~ll~g~~pf~  223 (486)
T 3mwu_A          149 PENILLESKEKDCDIKIIDFGLSTCFQQ---NTKMKDRIGTAYYIAPEVLR-G-TYDEKCDVWSAGVILYILLSGTPPFY  223 (486)
T ss_dssp             GGGEEESSSSTTCCEEECSCSCTTTBCC---C----CCTTGGGGCCGGGGG-S-CCCHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             hHHEEEecCCCCCCEEEEECCcCeECCC---CCccCCCcCCCCCCCHHHhC-C-CCCchhhHHHHHHHHHHHHhCCCCCC
Confidence            7899995   456799999999976522   12233457899999996554 3 47889999999999999999999996


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ......                 .+............+....++..+.+++.+||+.||.+|||+.++++
T Consensus       224 ~~~~~~-----------------~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~  276 (486)
T 3mwu_A          224 GKNEYD-----------------ILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (486)
T ss_dssp             CSSHHH-----------------HHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             CCCHHH-----------------HHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            432111                 01111111111112223445667899999999999999999999987

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.88  E-value=8e-23  Score=146.17  Aligned_cols=128  Identities=19%  Similarity=0.256  Sum_probs=83.3

Q ss_pred             CcceEecCC---ceEEEeccccceeccCCCCccccccccccccccCchhhhc--cCcccCccchHhHHHHHHHHHhcCCC
Q 039452            1 PSNVLLDDN---MVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGR--EGRVSTNGDVYSFGIMLMEAFTRKKP   75 (164)
Q Consensus         1 p~Nill~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~--~~~~~~~~Di~s~g~~~~~~~~g~~p   75 (164)
                      |+|||++.+   +.+||+|||+++.+.   .........|++.|+|||.+..  ...++.++|+||+||++|+|++|..|
T Consensus       267 p~NIll~~~~~~~~~kl~DFG~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~p  343 (419)
T 3i6u_A          267 PENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP  343 (419)
T ss_dssp             GGGEEESSSSSSCCEEECCSSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCS
T ss_pred             hHhEEEecCCCcceEEEeecccceecC---CCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCC
Confidence            689999754   459999999998752   1222234568999999966542  34577899999999999999999999


Q ss_pred             CCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           76 TDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      |...........             .+....   ..........++..+.+++.+||+.||.+|||++++++
T Consensus       344 f~~~~~~~~~~~-------------~i~~~~---~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  399 (419)
T 3i6u_A          344 FSEHRTQVSLKD-------------QITSGK---YNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR  399 (419)
T ss_dssp             SCCCSSSCCHHH-------------HHHTTC---CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CCCCcchHHHHH-------------HHhcCC---CCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence            975322221111             111111   11111122345667899999999999999999999986

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.88  E-value=5.5e-23  Score=149.38  Aligned_cols=125  Identities=18%  Similarity=0.272  Sum_probs=89.1

Q ss_pred             CcceEe---cCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCC
Q 039452            1 PSNVLL---DDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         1 p~Nill---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      |+|||+   +.++.+||+|||+++.+...   .......|++.|+|||.+. + .++.++||||+||++|++++|..||.
T Consensus       154 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~-~-~~~~~~DiwslG~il~~ll~g~~pf~  228 (484)
T 3nyv_A          154 PENLLLESKSKDANIRIIDFGLSTHFEAS---KKMKDKIGTAYYIAPEVLH-G-TYDEKCDVWSTGVILYILLSGCPPFN  228 (484)
T ss_dssp             GGGEEESSSSTTCCEEECCTTHHHHBCCC---CSHHHHTTGGGTCCHHHHH-T-CCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             HHHEEEecCCCCCcEEEEeeeeeEEcccc---cccccCCCCccccCceeec-C-CCCCcceeHHHHHHHHHHHHCCCCCC
Confidence            789999   46789999999999765221   2233456899999996654 3 57889999999999999999999997


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ......  ..            ..+...   ......+....+++.+.+++.+||+.||.+|||+.++++
T Consensus       229 ~~~~~~--~~------------~~i~~~---~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  281 (484)
T 3nyv_A          229 GANEYD--IL------------KKVEKG---KYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD  281 (484)
T ss_dssp             CSSHHH--HH------------HHHHHC---CCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCCHHH--HH------------HHHHcC---CCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence            432111  10            011111   111112223345677899999999999999999999986

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.88  E-value=1.6e-22  Score=137.10  Aligned_cols=125  Identities=18%  Similarity=0.208  Sum_probs=88.4

Q ss_pred             CcceEe---cCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCC
Q 039452            1 PSNVLL---DDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         1 p~Nill---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      |+||++   +.++.++|+|||.+..+...   .......+++.|+|||.+.  ..++.++|+||+|+++|++++|..||.
T Consensus       134 p~Nil~~~~~~~~~~~l~Dfg~~~~~~~~---~~~~~~~~t~~y~aPE~~~--~~~~~~~Di~slG~~l~~l~~g~~p~~  208 (277)
T 3f3z_A          134 PENFLFLTDSPDSPLKLIDFGLAARFKPG---KMMRTKVGTPYYVSPQVLE--GLYGPECDEWSAGVMMYVLLCGYPPFS  208 (277)
T ss_dssp             GGGEEESSSSTTCCEEECCCTTCEECCTT---SCBCCCCSCTTTCCHHHHT--TCBCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred             HHHEEEecCCCCCcEEEEecccceeccCc---cchhccCCCCCccChHHhc--ccCCchhhehhHHHHHHHHHHCCCCCC
Confidence            689999   78889999999999875321   2233456899999996553  338889999999999999999999997


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ......  ..           ..+. ..   ...........+++.+.+++.+||+.||.+|||+.++++
T Consensus       209 ~~~~~~--~~-----------~~~~-~~---~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~  261 (277)
T 3f3z_A          209 APTDSE--VM-----------LKIR-EG---TFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE  261 (277)
T ss_dssp             CSSHHH--HH-----------HHHH-HC---CCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             CCCHHH--HH-----------HHHH-hC---CCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            532111  00           0000 11   111111112245667899999999999999999999986

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.88  E-value=3e-22  Score=139.94  Aligned_cols=133  Identities=18%  Similarity=0.136  Sum_probs=84.5

Q ss_pred             cCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccccCchhH
Q 039452            7 DDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTL   86 (164)
Q Consensus         7 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~~~~~~~   86 (164)
                      +.++.+||+|||+++....     ......|+..|+|||.+ ....++.++|+||+||++|+|++|..||......  ..
T Consensus       176 ~~~~~~kl~Dfg~~~~~~~-----~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--~~  247 (355)
T 2eu9_A          176 VKNTSIRVADFGSATFDHE-----HHTTIVATRHYRPPEVI-LELGWAQPCDVWSIGCILFEYYRGFTLFQTHENR--EH  247 (355)
T ss_dssp             ESCCCEEECCCTTCEETTS-----CCCSSCSCGGGCCHHHH-TTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HH
T ss_pred             cCCCcEEEeecCccccccc-----cccCCcCCCcccCCeee-ecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH--HH
Confidence            5678999999999976421     12345689999999554 4566889999999999999999999999743221  11


Q ss_pred             HHHHHHhhhhhhHHHhhhhcc-------------------------cccchhhhhHHHHHHHHHHHHhhccccCccCCCC
Q 039452           87 KRWINDLLSVSVMEVVDANLL-------------------------TREDRHFAAKQQCVSFVFNLAMECTIESPERRIN  141 (164)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps  141 (164)
                      ...+.................                         .............+..+.+++.+||+.||++|||
T Consensus       248 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt  327 (355)
T 2eu9_A          248 LVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRIT  327 (355)
T ss_dssp             HHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCC
T ss_pred             HHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcC
Confidence            111111111111111111000                         0000000111234567899999999999999999


Q ss_pred             HHHHHH
Q 039452          142 AKEIVT  147 (164)
Q Consensus       142 ~~~vl~  147 (164)
                      ++++++
T Consensus       328 ~~e~l~  333 (355)
T 2eu9_A          328 LAEALL  333 (355)
T ss_dssp             HHHHTT
T ss_pred             HHHHhc
Confidence            999985

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.88  E-value=3.4e-22  Score=138.83  Aligned_cols=139  Identities=19%  Similarity=0.186  Sum_probs=90.2

Q ss_pred             CcceEecC-------------------CceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHh
Q 039452            1 PSNVLLDD-------------------NMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS   61 (164)
Q Consensus         1 p~Nill~~-------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s   61 (164)
                      |+|||++.                   ++.+||+|||+++....     ......++..|+|||.+ ....++.++|+||
T Consensus       146 p~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~-----~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~s  219 (339)
T 1z57_A          146 PENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDE-----HHSTLVSTRHYRAPEVI-LALGWSQPCDVWS  219 (339)
T ss_dssp             GGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTS-----CCCSSCSCGGGCCHHHH-TTSCCCTHHHHHH
T ss_pred             HHHEEEeccccccccCCccccccccccCCCceEeeCcccccCcc-----ccccccCCccccChHHh-hCCCCCcchhhHH
Confidence            68999986                   66799999999976421     12345689999999554 4556889999999


Q ss_pred             HHHHHHHHHhcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcc-------------------------cccchhhhh
Q 039452           62 FGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLL-------------------------TREDRHFAA  116 (164)
Q Consensus        62 ~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~  116 (164)
                      +|+++|++++|..||.....  ......+.................                         .........
T Consensus       220 lG~il~el~~g~~pf~~~~~--~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (339)
T 1z57_A          220 IGCILIEYYLGFTVFPTHDS--KEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLS  297 (339)
T ss_dssp             HHHHHHHHHHSSCSCCCSCH--HHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSC
T ss_pred             HHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhccc
Confidence            99999999999999974322  111111111111111111111000                         000000111


Q ss_pred             HHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452          117 KQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus       117 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ....+..+.+++.+||+.||.+|||++++++
T Consensus       298 ~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  328 (339)
T 1z57_A          298 QDVEHERLFDLIQKMLEYDPAKRITLREALK  328 (339)
T ss_dssp             CSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             chhhHHHHHHHHHHHhCcCcccccCHHHHhc
Confidence            2345677999999999999999999999986

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.87  E-value=1.7e-23  Score=146.12  Aligned_cols=122  Identities=20%  Similarity=0.273  Sum_probs=87.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.+|.+||+|||+++....  .........||+.|+|||.+ ....++.++|+||+||++|+|++|..||....
T Consensus       146 p~NIll~~~g~vkL~DFG~a~~~~~--~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~  222 (345)
T 1xjd_A          146 LDNILLDKDGHIKIADFGMCKENML--GDAKTNTFCGTPDYIAPEIL-LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD  222 (345)
T ss_dssp             GGGEEECTTSCEEECCCTTCBCCCC--TTCCBCCCCSCGGGCCHHHH-TTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             hhhEEECCCCCEEEeEChhhhhccc--CCCcccCCCCCcccCChhhh-cCCCCCChhhhHHHHHHHHHHhcCCCCCCCCC
Confidence            6899999999999999999875421  11223445789999999554 45668899999999999999999999997432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHH-HHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAK-EIV  146 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~-~vl  146 (164)
                      .  .....           .+.. .   ..    ..+..++..+.+++.+||..||.+||++. +++
T Consensus       223 ~--~~~~~-----------~i~~-~---~~----~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~  268 (345)
T 1xjd_A          223 E--EELFH-----------SIRM-D---NP----FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIR  268 (345)
T ss_dssp             H--HHHHH-----------HHHH-C---CC----CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             H--HHHHH-----------HHHh-C---CC----CCCcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence            1  11100           0110 0   00    01223456689999999999999999987 554

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.87  E-value=1.2e-22  Score=139.95  Aligned_cols=126  Identities=24%  Similarity=0.348  Sum_probs=89.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||.+..+..  .........++..|+|||. .....++.++|+||+|+++|++++|..||....
T Consensus       153 p~Nil~~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  229 (314)
T 3com_A          153 AGNILLNTEGHAKLADFGVAGQLTD--TMAKRNTVIGTPFWMAPEV-IQEIGYNCVADIWSLGITAIEMAEGKPPYADIH  229 (314)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECBT--TBSCBCCCCSCGGGCCHHH-HSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred             HHHEEECCCCCEEEeecccchhhhh--hccccCccCCCCCccChhh-cCCCCCCccccHHHHHHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999977522  1122334568899999954 445568889999999999999999999996432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ....  ..           . ....    .......+..++..+.+++.+||..||.+|||+.++++
T Consensus       230 ~~~~--~~-----------~-~~~~----~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          230 PMRA--IF-----------M-IPTN----PPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             HHHH--HH-----------H-HHHS----CCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             hHHH--HH-----------H-HhcC----CCcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            1110  00           0 0000    00111122334566899999999999999999999986

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.87  E-value=1.3e-22  Score=140.70  Aligned_cols=124  Identities=23%  Similarity=0.312  Sum_probs=85.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc----------cccccccccccccCchhhhccCcccCccchHhHHHHHHHHH
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS----------MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAF   70 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~----------~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~   70 (164)
                      |+|||++.++.+||+|||+++.+......          .......|++.|+|||.+ ....++.++|+||+|+++|+++
T Consensus       192 p~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~il~el~  270 (332)
T 3qd2_B          192 PSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQI-HGNNYSHKVDIFSLGLILFELL  270 (332)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHH-HCCCCCTHHHHHHHHHHHHHHH
T ss_pred             cccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccChHHh-cCCCCcchhhHHHHHHHHHHHH
Confidence            68999999999999999999876322111          122335689999999554 4566889999999999999999


Q ss_pred             hcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           71 TRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        71 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      +|..|+...       ....         ......      .........++.+.+++.+||+.||.+|||++++++
T Consensus       271 ~~~~~~~~~-------~~~~---------~~~~~~------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~  325 (332)
T 3qd2_B          271 YSFSTQMER-------VRII---------TDVRNL------KFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIE  325 (332)
T ss_dssp             SCCCCHHHH-------HHHH---------HHHHTT------CCCHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred             HcCCChhHH-------HHHH---------HHhhcc------CCCcccccCChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence            986654210       0000         000000      011122344556789999999999999999999986

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.87  E-value=2.6e-22  Score=136.99  Aligned_cols=123  Identities=20%  Similarity=0.336  Sum_probs=86.7

Q ss_pred             CcceEec-CCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLD-DNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~-~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+||+++ .++.+||+|||++....    ........+++.|+|||.+.  ..++.++|+||+|+++|++++|..||...
T Consensus       159 p~Nil~~~~~~~~kl~Dfg~~~~~~----~~~~~~~~~t~~y~aPE~~~--~~~~~~~Di~slG~~l~~l~~g~~pf~~~  232 (290)
T 1t4h_A          159 CDNIFITGPTGSVKIGDLGLATLKR----ASFAKAVIGTPEFMAPEMYE--EKYDESVDVYAFGMCMLEMATSEYPYSEC  232 (290)
T ss_dssp             GGGEEESSTTSCEEECCTTGGGGCC----TTSBEESCSSCCCCCGGGGG--TCCCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             HHHEEEECCCCCEEEeeCCCccccc----ccccccccCCcCcCCHHHHh--ccCCCcchHHHHHHHHHHHHhCCCCCCCc
Confidence            6899997 78999999999986531    11223456899999996543  44888999999999999999999999643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ........             .+...     ......+...++.+.+++.+||+.||.+|||+.++++
T Consensus       233 ~~~~~~~~-------------~~~~~-----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  282 (290)
T 1t4h_A          233 QNAAQIYR-------------RVTSG-----VKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             SSHHHHHH-------------HHTTT-----CCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CcHHHHHH-------------HHhcc-----CCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence            22111110             00000     0111112233456899999999999999999999986

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.87  E-value=7.9e-23  Score=138.81  Aligned_cols=122  Identities=20%  Similarity=0.239  Sum_probs=85.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||++....    ........++..|+||| +.....++.++|+||+|+++|++++|..||....
T Consensus       137 p~Nili~~~~~~~l~Dfg~~~~~~----~~~~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  211 (279)
T 3fdn_A          137 PENLLLGSAGELKIADFGWSVHAP----SSRRTDLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT  211 (279)
T ss_dssp             GGGEEECTTSCEEECSCCEESCC------------CCCCTTCCHH-HHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred             hHhEEEcCCCCEEEEeccccccCC----cccccccCCCCCccCHh-HhccCCCCccchhHhHHHHHHHHHHCCCCCCCCc
Confidence            689999999999999999886532    11223456889999995 4456667889999999999999999999996421


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTE  148 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  148 (164)
                      ...  ..            ..+....       ...+..++..+.+++.+||+.||.+|||++++++.
T Consensus       212 ~~~--~~------------~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h  258 (279)
T 3fdn_A          212 YQE--TY------------KRISRVE-------FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH  258 (279)
T ss_dssp             HHH--HH------------HHHHHTC-------CCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred             HHH--HH------------HHHHhCC-------CCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence            111  00            0000000       01122345568899999999999999999999973

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.87  E-value=3.9e-23  Score=145.65  Aligned_cols=120  Identities=23%  Similarity=0.283  Sum_probs=85.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.+|.+||+|||+++....  .........||+.|+|||. .....++.++|+||+||++|+|++|..||....
T Consensus       167 p~NIll~~~g~ikL~DFG~a~~~~~--~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~  243 (373)
T 2r5t_A          167 PENILLDSQGHIVLTDFGLCKENIE--HNSTTSTFCGTPEYLAPEV-LHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN  243 (373)
T ss_dssp             GGGEEECTTSCEEECCCCBCGGGBC--CCCCCCSBSCCCCCCCHHH-HTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSB
T ss_pred             HHHEEECCCCCEEEeeCcccccccc--CCCccccccCCccccCHHH-hCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC
Confidence            6899999999999999999876421  1222345678999999954 455668899999999999999999999996432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKE  144 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~  144 (164)
                      ...  .           ...++....        ..+..++..+.+++.+||+.||.+||++.+
T Consensus       244 ~~~--~-----------~~~i~~~~~--------~~~~~~~~~~~~li~~lL~~dp~~R~~~~~  286 (373)
T 2r5t_A          244 TAE--M-----------YDNILNKPL--------QLKPNITNSARHLLEGLLQKDRTKRLGAKD  286 (373)
T ss_dssp             HHH--H-----------HHHHHHSCC--------CCCSSSCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred             HHH--H-----------HHHHHhccc--------CCCCCCCHHHHHHHHHHcccCHHhCCCCCC
Confidence            111  0           111111111        012234556899999999999999999853

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.87  E-value=6.1e-23  Score=143.76  Aligned_cols=123  Identities=21%  Similarity=0.301  Sum_probs=87.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.+|.+||+|||+++....  .........||+.|+|||.+ ....++.++|+||+||++|+|++|..||....
T Consensus       149 p~NIll~~~g~vkL~DFG~a~~~~~--~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~  225 (353)
T 2i0e_A          149 LDNVMLDSEGHIKIADFGMCKENIW--DGVTTKTFCGTPDYIAPEII-AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED  225 (353)
T ss_dssp             GGGEEECTTSCEEECCCTTCBCCCC--TTCCBCCCCSCGGGCCHHHH-TTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             HHHEEEcCCCcEEEEeCCccccccc--CCcccccccCCccccChhhh-cCCCcCCcccccchHHHHHHHHcCCCCCCCCC
Confidence            7899999999999999999876321  11223345789999999544 55668899999999999999999999997432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCC-----HHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRIN-----AKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~vl~  147 (164)
                      .  ....           ..+.....        ..+..++..+.+++.+||+.||.+||+     ++++++
T Consensus       226 ~--~~~~-----------~~i~~~~~--------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~  276 (353)
T 2i0e_A          226 E--DELF-----------QSIMEHNV--------AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE  276 (353)
T ss_dssp             H--HHHH-----------HHHHHCCC--------CCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred             H--HHHH-----------HHHHhCCC--------CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence            1  1110           11111110        112345566899999999999999995     456654

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.87  E-value=2.8e-22  Score=136.27  Aligned_cols=132  Identities=19%  Similarity=0.254  Sum_probs=89.3

Q ss_pred             CcceEecCCc----eEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCC
Q 039452            1 PSNVLLDDNM----VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPT   76 (164)
Q Consensus         1 p~Nill~~~~----~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~   76 (164)
                      |+||+++.++    .+||+|||.+..+....   ......+++.|+||| +.....++.++|+||+|+++|++++|..||
T Consensus       136 p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~il~~l~~g~~p~  211 (283)
T 3bhy_A          136 PENIMLLDKNVPNPRIKLIDFGIAHKIEAGN---EFKNIFGTPEFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPF  211 (283)
T ss_dssp             GGGEEESCSSSSSCCEEECCCTTCEECC-----------CCCGGGCCHH-HHTTCCCCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             hHHEEEecCCCCCCceEEEecccceeccCCC---cccccCCCcCccCcc-eecCCCCCcchhhhhHHHHHHHHHHCCCCC
Confidence            6899998776    89999999998752211   223456889999995 445566888999999999999999999999


Q ss_pred             CccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH--HHHHHH
Q 039452           77 DEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT--ELSKIR  153 (164)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~--~l~~~~  153 (164)
                      .......  ..           .. +..   ............++..+.+++.+||..||.+|||+.++++  .+..+.
T Consensus       212 ~~~~~~~--~~-----------~~-~~~---~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  273 (283)
T 3bhy_A          212 LGETKQE--TL-----------TN-ISA---VNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR  273 (283)
T ss_dssp             CCSSHHH--HH-----------HH-HHT---TCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred             CCcchHH--HH-----------HH-hHh---cccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence            6432110  00           00 000   0111112222345566899999999999999999999997  444443

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.87  E-value=2.2e-22  Score=146.93  Aligned_cols=125  Identities=18%  Similarity=0.243  Sum_probs=89.5

Q ss_pred             CcceEecCCc---eEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCC
Q 039452            1 PSNVLLDDNM---VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         1 p~Nill~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      |+|||++.++   .+||+|||++..+...   .......|++.|+|||.+.  ..++.++||||+||++|++++|..||.
T Consensus       174 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~~ll~g~~pf~  248 (504)
T 3q5i_A          174 PENILLENKNSLLNIKIVDFGLSSFFSKD---YKLRDRLGTAYYIAPEVLK--KKYNEKCDVWSCGVIMYILLCGYPPFG  248 (504)
T ss_dssp             GGGEEESSTTCCSSEEECCCTTCEECCTT---SCBCCCCSCTTTCCHHHHT--TCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             HHHEEEecCCCCccEEEEECCCCEEcCCC---CccccccCCcCCCCHHHhc--cCCCchHHHHHHHHHHHHHHhCCCCCC
Confidence            7899998765   6999999999876321   2233456899999996553  458889999999999999999999997


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ......                 .+.................++..+.+++.+||+.||.+|||++++++
T Consensus       249 ~~~~~~-----------------~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~  301 (504)
T 3q5i_A          249 GQNDQD-----------------IIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN  301 (504)
T ss_dssp             CSSHHH-----------------HHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCCHHH-----------------HHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            432111                 11111111111122223445677999999999999999999999986

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.87  E-value=6.7e-23  Score=139.07  Aligned_cols=123  Identities=20%  Similarity=0.286  Sum_probs=71.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||.+.....  .........+++.|+||| +.....++.++|+||+|+++|++++|..||....
T Consensus       140 p~Nili~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  216 (278)
T 3cok_A          140 LSNLLLTRNMNIKIADFGLATQLKM--PHEKHYTLCGTPNYISPE-IATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDT  216 (278)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECC-------------------------------CTHHHHHHHHHHHHHHSSCSSCCCS
T ss_pred             HHHEEEcCCCCEEEEeecceeeccC--CCCcceeccCCCCcCCcc-hhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChh
Confidence            6899999999999999999987521  111222356889999995 4445567889999999999999999999997432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ....                 ........    ...+..++..+.+++.+||+.||.+|||++++++
T Consensus       217 ~~~~-----------------~~~~~~~~----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          217 VKNT-----------------LNKVVLAD----YEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             CC----------------------CCSSC----CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHH-----------------HHHHhhcc----cCCccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence            2111                 00000000    0112334556889999999999999999999986

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.87  E-value=2.3e-22  Score=137.59  Aligned_cols=127  Identities=23%  Similarity=0.304  Sum_probs=89.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhh-----ccCcccCccchHhHHHHHHHHHhcCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYG-----REGRVSTNGDVYSFGIMLMEAFTRKKP   75 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~-----~~~~~~~~~Di~s~g~~~~~~~~g~~p   75 (164)
                      |+||+++.++.+||+|||.+..+...   .......++..|+|||.+.     ....++.++|+||+|+++|++++|..|
T Consensus       152 p~Nil~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p  228 (298)
T 1phk_A          152 PENILLDDDMNIKLTDFGFSCQLDPG---EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP  228 (298)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECCTT---CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             cceEEEcCCCcEEEecccchhhcCCC---cccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCC
Confidence            68999999999999999999875321   1223456889999997654     234577899999999999999999999


Q ss_pred             CCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           76 TDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      |.....  .....           .+....    ..........++..+.+++.+||+.||.+|||+.++++
T Consensus       229 ~~~~~~--~~~~~-----------~~~~~~----~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          229 FWHRKQ--MLMLR-----------MIMSGN----YQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             SCCSSH--HHHHH-----------HHHHTC----CCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             CcCccH--HHHHH-----------HHhcCC----cccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence            864321  11100           011110    01111122345666899999999999999999999986

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.87  E-value=2e-22  Score=146.83  Aligned_cols=125  Identities=20%  Similarity=0.295  Sum_probs=88.1

Q ss_pred             CcceEecC---CceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCC
Q 039452            1 PSNVLLDD---NMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         1 p~Nill~~---~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      |+|||++.   ++.+||+|||+++.+...   .......|++.|+|||.+.  ..++.++||||+||++|++++|..||.
T Consensus       164 p~Nil~~~~~~~~~~kl~DfG~a~~~~~~---~~~~~~~gt~~y~aPE~l~--~~~~~~~DiwslG~il~~ll~g~~pf~  238 (494)
T 3lij_A          164 PENLLLESKEKDALIKIVDFGLSAVFENQ---KKMKERLGTAYYIAPEVLR--KKYDEKCDVWSIGVILFILLAGYPPFG  238 (494)
T ss_dssp             GGGEEESCSSTTCCEEECCCTTCEECBTT---BCBCCCCSCTTTCCHHHHT--TCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             hhhEEEeCCCCCCcEEEEECCCCeECCCC---ccccccCCCcCeeCHHHHc--ccCCCchhHHHHHHHHHHHHhCCCCCC
Confidence            78999975   456999999999876322   2233456899999996553  458899999999999999999999997


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ......  ..            ..+....   ..........++..+.+++.+||+.||.+|||+.++++
T Consensus       239 ~~~~~~--~~------------~~i~~~~---~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  291 (494)
T 3lij_A          239 GQTDQE--IL------------RKVEKGK---YTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE  291 (494)
T ss_dssp             CSSHHH--HH------------HHHHHTC---CCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCCHHH--HH------------HHHHhCC---CCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence            432111  00            1111111   11111122345666899999999999999999999985

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.87  E-value=7e-23  Score=140.57  Aligned_cols=125  Identities=22%  Similarity=0.335  Sum_probs=89.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||.+..+..  .........++..|+|||. .....++.++|+||+|+++|++++|..||....
T Consensus       147 p~Nil~~~~~~~kl~Dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  223 (303)
T 3a7i_A          147 AANVLLSEHGEVKLADFGVAGQLTD--TQIKRNTFVGTPFWMAPEV-IKQSAYDSKADIWSLGITAIELARGEPPHSELH  223 (303)
T ss_dssp             GGGEEECTTSCEEECCCTTCEECBT--TBCCBCCCCSCGGGCCHHH-HTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred             hheEEECCCCCEEEeecccceecCc--cccccCccCCCcCccCHHH-HhcCCCCchhhhHHHHHHHHHHccCCCCCCCcC
Confidence            6899999999999999999987532  2222334568899999954 445667889999999999999999999986432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTE  148 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  148 (164)
                      ...  ...            .+......      ..+..++..+.+++.+||+.||.+|||+.++++.
T Consensus       224 ~~~--~~~------------~~~~~~~~------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  271 (303)
T 3a7i_A          224 PMK--VLF------------LIPKNNPP------TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH  271 (303)
T ss_dssp             HHH--HHH------------HHHHSCCC------CCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred             HHH--HHH------------HhhcCCCC------CCccccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence            111  100            00000000      1112344558899999999999999999999874

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.87  E-value=2.9e-22  Score=138.89  Aligned_cols=135  Identities=23%  Similarity=0.368  Sum_probs=92.7

Q ss_pred             CcceEecC---CceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCC
Q 039452            1 PSNVLLDD---NMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPT   76 (164)
Q Consensus         1 p~Nill~~---~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~   76 (164)
                      |+||+++.   +..+||+|||+++...............++..|+|||.+ ....++.++|+||+|+++|++++ |..||
T Consensus       168 p~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~ellt~g~~p~  246 (327)
T 2yfx_A          168 ARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF-MEGIFTSKTDTWSFGVLLWEIFSLGYMPY  246 (327)
T ss_dssp             GGGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred             HhHEEEecCCCcceEEECccccccccccccccccCCCcCCCcceeCHhHh-cCCCCCchhhHHHHHHHHHHHHcCCCCCC
Confidence            68999984   456999999998765332222233345678899999554 45567889999999999999998 88998


Q ss_pred             CccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHh
Q 039452           77 DEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL  156 (164)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~  156 (164)
                      .....  ....            ..+......      ..+..++..+.+++.+||+.||.+|||+.++++.|..+.+..
T Consensus       247 ~~~~~--~~~~------------~~~~~~~~~------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~  306 (327)
T 2yfx_A          247 PSKSN--QEVL------------EFVTSGGRM------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP  306 (327)
T ss_dssp             TTCCH--HHHH------------HHHHTTCCC------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred             CCcCH--HHHH------------HHHhcCCCC------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence            64211  1111            111111000      112234556899999999999999999999999999887643

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.87  E-value=3.7e-22  Score=140.47  Aligned_cols=140  Identities=16%  Similarity=0.193  Sum_probs=87.8

Q ss_pred             CcceEec------CCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCC
Q 039452            1 PSNVLLD------DNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKK   74 (164)
Q Consensus         1 p~Nill~------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~   74 (164)
                      |+|||++      ..+.+||+|||++.....     ......+++.|+|||.+ ....++.++||||+|+++|++++|..
T Consensus       160 p~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~~t~~y~aPE~~-~~~~~~~~~Di~slG~il~el~~g~~  233 (373)
T 1q8y_A          160 PENVLMEIVDSPENLIQIKIADLGNACWYDE-----HYTNSIQTREYRSPEVL-LGAPWGCGADIWSTACLIFELITGDF  233 (373)
T ss_dssp             GGGEEEEEEETTTTEEEEEECCCTTCEETTB-----CCCSCCSCGGGCCHHHH-HTCCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             hHHeEEeccCCCcCcceEEEcccccccccCC-----CCCCCCCCccccCcHHH-hCCCCCchHhHHHHHHHHHHHHhCCC
Confidence            6899994      445899999999987521     12334689999999554 45568899999999999999999999


Q ss_pred             CCCccccCc-----hhHHHHHHHhhhhhhHHHhhhhccc----------------c-------cchhhhhHHHHHHHHHH
Q 039452           75 PTDEMFSGE-----MTLKRWINDLLSVSVMEVVDANLLT----------------R-------EDRHFAAKQQCVSFVFN  126 (164)
Q Consensus        75 p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~----------------~-------~~~~~~~~~~~~~~~~~  126 (164)
                      ||.......     ....... .................                .       .......+..++..+.+
T Consensus       234 pf~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (373)
T 1q8y_A          234 LFEPDEGHSYTKDDDHIAQII-ELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISD  312 (373)
T ss_dssp             CC---------CHHHHHHHHH-HHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHH
T ss_pred             CCCCCcccccCChHHHHHHHH-HhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHH
Confidence            997532211     1111111 11111111111000000                0       00011123456778999


Q ss_pred             HHhhccccCccCCCCHHHHHH
Q 039452          127 LAMECTIESPERRINAKEIVT  147 (164)
Q Consensus       127 l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ++.+||+.||++|||++++++
T Consensus       313 li~~~L~~dP~~Rpt~~ell~  333 (373)
T 1q8y_A          313 FLSPMLQLDPRKRADAGGLVN  333 (373)
T ss_dssp             HHGGGGCSSTTTCBCHHHHHT
T ss_pred             HHHHHhccCccccCCHHHHhh
Confidence            999999999999999999987

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.87  E-value=1.2e-23  Score=143.52  Aligned_cols=132  Identities=17%  Similarity=0.200  Sum_probs=87.6

Q ss_pred             CcceEecCCce--------EEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhc
Q 039452            1 PSNVLLDDNMV--------AHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTR   72 (164)
Q Consensus         1 p~Nill~~~~~--------~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g   72 (164)
                      |+|||++.++.        +||+|||.+....      ......++..|+|||.+.....++.++||||+|+++|++++|
T Consensus       141 p~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g  214 (289)
T 4fvq_A          141 AKNILLIREEDRKTGNPPFIKLSDPGISITVL------PKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG  214 (289)
T ss_dssp             GGGEEEEECCBGGGTBCCEEEECCCCSCTTTS------CHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTT
T ss_pred             cceEEEecCCcccccccceeeeccCccccccc------CccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcC
Confidence            68999988776        9999999986531      112345788899997665546688899999999999999996


Q ss_pred             CCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHH
Q 039452           73 KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI  152 (164)
Q Consensus        73 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~  152 (164)
                      ..|+........ ..            ........        .+...+..+.+++.+||+.||.+|||+.++++.|.++
T Consensus       215 ~~~~~~~~~~~~-~~------------~~~~~~~~--------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l  273 (289)
T 4fvq_A          215 GDKPLSALDSQR-KL------------QFYEDRHQ--------LPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL  273 (289)
T ss_dssp             TCCTTTTSCHHH-HH------------HHHHTTCC--------CCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTC
T ss_pred             CCCCccccchHH-HH------------HHhhccCC--------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence            554432111110 00            00000000        0111233478999999999999999999999999988


Q ss_pred             HHHhhcc
Q 039452          153 RDSLFRN  159 (164)
Q Consensus       153 ~~~~~~~  159 (164)
                      ...-..+
T Consensus       274 ~~p~~~~  280 (289)
T 4fvq_A          274 FTPDLVP  280 (289)
T ss_dssp             C------
T ss_pred             cCCCCCC
Confidence            7655544

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.87  E-value=1.5e-22  Score=139.64  Aligned_cols=144  Identities=13%  Similarity=0.160  Sum_probs=86.1

Q ss_pred             CcceEecCCce---EEEeccccceeccCCCC-----ccccccccccccccCchhhhc----cCcccCccchHhHHHHHHH
Q 039452            1 PSNVLLDDNMV---AHLSDFGIAKLLIGEDQ-----SMTQTQTLATIGYMAPVEYGR----EGRVSTNGDVYSFGIMLME   68 (164)
Q Consensus         1 p~Nill~~~~~---~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~~----~~~~~~~~Di~s~g~~~~~   68 (164)
                      |+||+++.++.   +||+|||+++.......     ........|+..|+|||.+..    ...++.++||||+||++|+
T Consensus       139 p~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~  218 (316)
T 2ac3_A          139 PENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYI  218 (316)
T ss_dssp             GGGEEESCSSSSCSEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHH
T ss_pred             HHHEEEccCCCcCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHH
Confidence            68999987765   99999999876521111     111223458999999966643    2347789999999999999


Q ss_pred             HHhcCCCCCccccCchhHHHHHH-HhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           69 AFTRKKPTDEMFSGEMTLKRWIN-DLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        69 ~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      +++|..||............... ..........+....   ..........++..+.+++.+||+.||.+|||++++++
T Consensus       219 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  295 (316)
T 2ac3_A          219 LLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGK---YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ  295 (316)
T ss_dssp             HHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCC---CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHCCCCCcccccccccccccccchhHHHHHHHHHhccC---cccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence            99999999754332211000000 000000111111111   11111122345667899999999999999999999987

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.87  E-value=9.7e-23  Score=153.07  Aligned_cols=123  Identities=21%  Similarity=0.297  Sum_probs=88.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||||+.+|.+||+|||+++.....  ........||+.|+||| +.....++.++|+||+|+++|+|++|..||....
T Consensus       470 p~NILl~~~g~ikL~DFGla~~~~~~--~~~~~~~~GT~~Y~APE-~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~  546 (674)
T 3pfq_A          470 LDNVMLDSEGHIKIADFGMCKENIWD--GVTTKTFCGTPDYIAPE-IIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED  546 (674)
T ss_dssp             STTEEECSSSCEEECCCTTCEECCCT--TCCBCCCCSCSSSCCHH-HHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             hhhEEEcCCCcEEEeecceeeccccC--CcccccccCCCcccCHh-hhcCCCCCccceEechHHHHHHHHcCCCCCCCCC
Confidence            78999999999999999999864211  12234567999999995 4456678999999999999999999999997532


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCH-----HHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINA-----KEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~-----~~vl~  147 (164)
                      .  ....           ..++...        ...+..++.++.+++.+||+.||.+|+++     +++++
T Consensus       547 ~--~~~~-----------~~i~~~~--------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~  597 (674)
T 3pfq_A          547 E--DELF-----------QSIMEHN--------VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE  597 (674)
T ss_dssp             H--HHHH-----------HHHHSSC--------CCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred             H--HHHH-----------HHHHhCC--------CCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence            1  1111           1111111        11123456678999999999999999997     55553

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.87  E-value=7.4e-23  Score=142.81  Aligned_cols=130  Identities=19%  Similarity=0.245  Sum_probs=87.2

Q ss_pred             CcceEecCC----ceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCC
Q 039452            1 PSNVLLDDN----MVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPT   76 (164)
Q Consensus         1 p~Nill~~~----~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~   76 (164)
                      |+|||+...    +.+||+|||++..+....  .......+++.|+|||.+ ....++.++|+||+||++|+|++|..||
T Consensus       144 p~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~g~~Pf  220 (342)
T 2qr7_A          144 PSNILYVDESGNPESIRICDFGFAKQLRAEN--GLLMTPCYTANFVAPEVL-ERQGYDAACDIWSLGVLLYTMLTGYTPF  220 (342)
T ss_dssp             GGGEEESSSSCSGGGEEECCCTTCEECBCTT--CCBCCSSCCSSCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHSSCSS
T ss_pred             HHHEEEecCCCCcCeEEEEECCCcccCcCCC--CceeccCCCccccCHHHh-cCCCCCCccCeeeHhHHHHHHhcCCCCC
Confidence            689998432    459999999998753222  223345689999999554 4445778999999999999999999999


Q ss_pred             CccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           77 DEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ........  ....         ..+.....   .........++..+.+++.+||..||++|||+.++++
T Consensus       221 ~~~~~~~~--~~~~---------~~i~~~~~---~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~  277 (342)
T 2qr7_A          221 ANGPDDTP--EEIL---------ARIGSGKF---SLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR  277 (342)
T ss_dssp             CSSTTSCH--HHHH---------HHHHHCCC---CCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             CCCCcCCH--HHHH---------HHHccCCc---ccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            74321111  1111         11111111   1111112345566899999999999999999999886

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.87  E-value=1.3e-22  Score=140.76  Aligned_cols=123  Identities=20%  Similarity=0.287  Sum_probs=83.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||+++.....  ........|++.|+|||.+ ....++.++|+||+|+++|+|++|..||....
T Consensus       149 p~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  225 (327)
T 3a62_A          149 PENIMLNHQGHVKLTDFGLCKESIHD--GTVTHTFCGTIEYMAPEIL-MRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN  225 (327)
T ss_dssp             TTTEEECTTSCEEECCCSCC------------CTTSSCCTTSCHHHH-TTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             HHHeEECCCCcEEEEeCCcccccccC--CccccccCCCcCccCHhhC-cCCCCCCcccchhHHHHHHHHHHCCCCCCCCC
Confidence            78999999999999999998754211  1122345689999999554 45567889999999999999999999997432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCC-----CHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRI-----NAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~vl~  147 (164)
                      ...  .           ...+.....        ..+..++..+.+++.+||+.||.+||     ++.++++
T Consensus       226 ~~~--~-----------~~~i~~~~~--------~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~  276 (327)
T 3a62_A          226 RKK--T-----------IDKILKCKL--------NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA  276 (327)
T ss_dssp             HHH--H-----------HHHHHHTCC--------CCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred             HHH--H-----------HHHHHhCCC--------CCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence            111  0           011111110        11223456689999999999999999     6777765

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.87  E-value=9.3e-23  Score=145.26  Aligned_cols=129  Identities=21%  Similarity=0.253  Sum_probs=89.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccC---cccCccchHhHHHHHHHHHhcCCCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREG---RVSTNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~---~~~~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      |+|||++.+|.+||+|||+++.+... .........||+.|+|||.+....   .++.++|+||+||++|+|++|..||.
T Consensus       196 p~NILl~~~g~ikL~DFG~a~~~~~~-~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~  274 (410)
T 3v8s_A          196 PDNMLLDKSGHLKLADFGTCMKMNKE-GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY  274 (410)
T ss_dssp             GGGEEECTTSCEEECCCTTCEECCTT-SEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTC
T ss_pred             HHHeeECCCCCEEEeccceeEeeccC-CcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCC
Confidence            68999999999999999999875221 112233567999999996665332   27789999999999999999999997


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccC--CCCHHHHHH
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPER--RINAKEIVT  147 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rps~~~vl~  147 (164)
                      ......  .           ...++....    ....+....++..+.+++.+||..+|.+  ||+++++++
T Consensus       275 ~~~~~~--~-----------~~~i~~~~~----~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~  329 (410)
T 3v8s_A          275 ADSLVG--T-----------YSKIMNHKN----SLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR  329 (410)
T ss_dssp             CSSHHH--H-----------HHHHHTHHH----HCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred             CCChhh--H-----------HHHHHhccc----cccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence            432111  1           011111100    0001111234566899999999999988  999999886

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.87  E-value=4e-23  Score=142.61  Aligned_cols=137  Identities=15%  Similarity=0.153  Sum_probs=87.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCC---CccccccccccccccCchhhhc--------cCcccCccchHhHHHHHHHH
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGED---QSMTQTQTLATIGYMAPVEYGR--------EGRVSTNGDVYSFGIMLMEA   69 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~~~~~~~pe~~~~--------~~~~~~~~Di~s~g~~~~~~   69 (164)
                      |+||+++ ++.+||+|||++.......   .........|+..|+|||.+..        ...++.++||||+|+++|++
T Consensus       158 p~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el  236 (319)
T 2y4i_B          158 SKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL  236 (319)
T ss_dssp             STTEEEC---CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHH
T ss_pred             hhhEEEe-CCCEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHH
Confidence            7899998 6789999999976542111   1112233458899999976643        23467889999999999999


Q ss_pred             HhcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHH
Q 039452           70 FTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTEL  149 (164)
Q Consensus        70 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l  149 (164)
                      ++|..||........  .   .        . +.......     .....++..+.+++.+||..||.+|||+.++++.|
T Consensus       237 ~~g~~p~~~~~~~~~--~---~--------~-~~~~~~~~-----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l  297 (319)
T 2y4i_B          237 HAREWPFKTQPAEAI--I---W--------Q-MGTGMKPN-----LSQIGMGKEISDILLFCWAFEQEERPTFTKLMDML  297 (319)
T ss_dssp             HHSSCSSSSCCHHHH--H---H--------H-HHTTCCCC-----CCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHH
T ss_pred             HhCCCCCCCCCHHHH--H---H--------H-hccCCCCC-----CCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHH
Confidence            999999974321110  0   0        0 00000000     00112344588999999999999999999999999


Q ss_pred             HHHHHHhh
Q 039452          150 SKIRDSLF  157 (164)
Q Consensus       150 ~~~~~~~~  157 (164)
                      +.+.+...
T Consensus       298 ~~l~~~~~  305 (319)
T 2y4i_B          298 EKLPKRNR  305 (319)
T ss_dssp             TTC-----
T ss_pred             HHHHHhhc
Confidence            99887654

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.87  E-value=5.9e-23  Score=142.07  Aligned_cols=116  Identities=24%  Similarity=0.281  Sum_probs=86.5

Q ss_pred             CcceEec-CCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLD-DNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~-~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+|||++ .++.+||+|||+++.....    ......++..|+|||.+......+.++|+||+|+++|++++|..||...
T Consensus       177 p~NIll~~~~~~~kL~Dfg~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~  252 (320)
T 3a99_A          177 DENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD  252 (320)
T ss_dssp             GGGEEEETTTTEEEECCCTTCEECCSS----CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH
T ss_pred             HHHEEEeCCCCCEEEeeCccccccccc----cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCCh
Confidence            6899999 7899999999999875221    2234568999999976655544577899999999999999999998632


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .                   ........        .+..++..+.+++.+||+.||.+|||++++++
T Consensus       253 ~-------------------~~~~~~~~--------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  293 (320)
T 3a99_A          253 E-------------------EIIRGQVF--------FRQRVSSECQHLIRWCLALRPSDRPTFEEIQN  293 (320)
T ss_dssp             H-------------------HHHHCCCC--------CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             h-------------------hhhccccc--------ccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            0                   01111000        11234556889999999999999999999986

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.87  E-value=1.4e-22  Score=140.09  Aligned_cols=120  Identities=23%  Similarity=0.312  Sum_probs=87.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.+|.+||+|||+++....     ......||+.|+|||. .....++.++|+||+||++|+|++|..||....
T Consensus       134 p~NIll~~~g~~kL~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~-~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  207 (318)
T 1fot_A          134 PENILLDKNGHIKITDFGFAKYVPD-----VTYTLCGTPDYIAPEV-VSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN  207 (318)
T ss_dssp             GGGEEECTTSCEEECCCSSCEECSS-----CBCCCCSCTTTCCHHH-HTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred             hheEEEcCCCCEEEeecCcceecCC-----ccccccCCccccCHhH-hcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999987521     1234568999999954 456668899999999999999999999996432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCC-----CHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRI-----NAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~vl~  147 (164)
                      .  ...           ...+.....        ..+..++..+.+++.+||..||.+||     +++++++
T Consensus       208 ~--~~~-----------~~~i~~~~~--------~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~  258 (318)
T 1fot_A          208 T--MKT-----------YEKILNAEL--------RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  258 (318)
T ss_dssp             H--HHH-----------HHHHHHCCC--------CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             H--HHH-----------HHHHHhCCC--------CCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence            1  100           111111110        01223455689999999999999999     8888874

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.87  E-value=1.2e-22  Score=142.22  Aligned_cols=120  Identities=18%  Similarity=0.221  Sum_probs=87.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.+|.+||+|||+++.....     .....|++.|+|||.+ ....++.++|+||+||++|+|++|..||....
T Consensus       169 p~NIll~~~g~~kL~DFg~a~~~~~~-----~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~  242 (350)
T 1rdq_E          169 PENLLIDQQGYIQVTDFGFAKRVKGR-----TWTLCGTPEALAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ  242 (350)
T ss_dssp             GGGEEECTTSCEEECCCTTCEECSSC-----BCCCEECGGGCCHHHH-TTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             cceEEECCCCCEEEcccccceeccCC-----cccccCCccccCHHHh-cCCCCCCcCCEecccHhHhHHhhCCCCCCCCC
Confidence            78999999999999999999875221     2345689999999554 45668899999999999999999999997432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCC-----HHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRIN-----AKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~vl~  147 (164)
                      .  ....           ..+.....        ..+..++..+.+++.+||+.||.+||+     ++++++
T Consensus       243 ~--~~~~-----------~~i~~~~~--------~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~  293 (350)
T 1rdq_E          243 P--IQIY-----------EKIVSGKV--------RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             H--HHHH-----------HHHHHCCC--------CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             H--HHHH-----------HHHHcCCC--------CCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence            1  1110           01111100        112234566899999999999999998     777765

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.87  E-value=1.2e-22  Score=140.09  Aligned_cols=127  Identities=23%  Similarity=0.360  Sum_probs=80.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhh----ccCcccCccchHhHHHHHHHHHhcCCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYG----REGRVSTNGDVYSFGIMLMEAFTRKKPT   76 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~----~~~~~~~~~Di~s~g~~~~~~~~g~~p~   76 (164)
                      |+||+++.++.+||+|||++..+...   .......++..|+|||.+.    ....++.++||||+|+++|++++|..||
T Consensus       153 p~Nil~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf  229 (318)
T 2dyl_A          153 PSNILLDERGQIKLCDFGISGRLVDD---KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPY  229 (318)
T ss_dssp             GGGEEECTTSCEEECCCTTC-----------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             HHHEEECCCCCEEEEECCCchhccCC---ccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCC
Confidence            68999999999999999998765221   1223446889999996654    3445778999999999999999999999


Q ss_pred             CccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           77 DEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ...........            .......     ........++..+.+++.+||+.||.+|||++++++
T Consensus       230 ~~~~~~~~~~~------------~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          230 KNCKTDFEVLT------------KVLQEEP-----PLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             TTCCSHHHHHH------------HHHHSCC-----CCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             CCCCccHHHHH------------HHhccCC-----CCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            74322111111            1111100     000111124556889999999999999999999987

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.87  E-value=1.6e-22  Score=138.87  Aligned_cols=126  Identities=19%  Similarity=0.182  Sum_probs=88.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccC-cccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREG-RVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||.+................++..|++||.+.... ..+.++|+||+|+++|++++|..||...
T Consensus       137 p~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  216 (305)
T 2wtk_C          137 PGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD  216 (305)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             cccEEEcCCCcEEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCc
Confidence            689999999999999999998753222222334456899999996554322 2467899999999999999999999742


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ..  ....            ..+.....       ..+..++..+.+++.+||+.||.+|||++++++
T Consensus       217 ~~--~~~~------------~~i~~~~~-------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  263 (305)
T 2wtk_C          217 NI--YKLF------------ENIGKGSY-------AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQ  263 (305)
T ss_dssp             SH--HHHH------------HHHHHCCC-------CCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             hH--HHHH------------HHHhcCCC-------CCCCccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            11  1000            00111100       112234556889999999999999999999986

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.87  E-value=2.4e-22  Score=139.03  Aligned_cols=128  Identities=20%  Similarity=0.283  Sum_probs=88.6

Q ss_pred             CcceEecCCc---eEEEeccccceeccCCCCccccccccccccccCchhhh--ccCcccCccchHhHHHHHHHHHhcCCC
Q 039452            1 PSNVLLDDNM---VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYG--REGRVSTNGDVYSFGIMLMEAFTRKKP   75 (164)
Q Consensus         1 p~Nill~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~--~~~~~~~~~Di~s~g~~~~~~~~g~~p   75 (164)
                      |+||+++.++   .+||+|||+++...   .........++..|+|||.+.  ....++.++|+||+|+++|++++|..|
T Consensus       142 p~NIl~~~~~~~~~~kl~Dfg~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p  218 (322)
T 2ycf_A          142 PENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP  218 (322)
T ss_dssp             GGGEEESSSSSSCCEEECCCTTCEECC---CCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCS
T ss_pred             HHHEEEecCCCCCeEEEccCccceecc---cccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            6899998655   49999999998752   111223456899999997653  245578899999999999999999999


Q ss_pred             CCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           76 TDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      |........ ...            .+.....   .........++..+.+++.+||+.||++|||+.++++
T Consensus       219 f~~~~~~~~-~~~------------~~~~~~~---~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          219 FSEHRTQVS-LKD------------QITSGKY---NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             SCSTTCSSC-HHH------------HHHHTCC---CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CcccchHHH-HHH------------HHHhCcc---ccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence            975332211 111            1111100   0111122345667899999999999999999999985

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.86  E-value=2.7e-22  Score=136.51  Aligned_cols=121  Identities=17%  Similarity=0.220  Sum_probs=87.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.+.....    .......++..|+|||. .....++.++|+||+|+++|++++|..||....
T Consensus       142 p~Nil~~~~~~~kl~Dfg~~~~~~~----~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  216 (284)
T 2vgo_A          142 PENLLMGYKGELKIADFGWSVHAPS----LRRRTMCGTLDYLPPEM-IEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS  216 (284)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECSS----SCBCCCCSCGGGCCHHH-HTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred             HHHEEEcCCCCEEEecccccccCcc----cccccccCCCCcCCHHH-hccCCCCcccchhhHHHHHHHHHHCCCCCCCCC
Confidence            6899999999999999999876421    11234568899999954 445667889999999999999999999996432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ...  ..           ..+.....        ..+..++..+.+++.+||+.||.+|||++++++
T Consensus       217 ~~~--~~-----------~~~~~~~~--------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~  262 (284)
T 2vgo_A          217 HTE--TH-----------RRIVNVDL--------KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVME  262 (284)
T ss_dssp             HHH--HH-----------HHHHTTCC--------CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HhH--HH-----------HHHhcccc--------CCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence            111  00           01111000        112234556889999999999999999999986

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.86  E-value=4.5e-22  Score=137.74  Aligned_cols=141  Identities=21%  Similarity=0.279  Sum_probs=90.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||.++...   .........++..|+|||.+ ....++.++|+||+|+++|++++|..||....
T Consensus       148 p~Nili~~~~~~kl~Dfg~~~~~~---~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  223 (326)
T 1blx_A          148 PQNILVTSSGQIKLADFGLARIYS---FQMALTSVVVTLWYRAPEVL-LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS  223 (326)
T ss_dssp             GGGEEECTTCCEEECSCCSCCCCC---GGGGGCCCCCCCTTCCHHHH-TTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             HHHeEEcCCCCEEEecCccccccc---CCCCccccccccceeCHHHH-hcCCCCcchhHHHHHHHHHHHHcCCCCCCCCC
Confidence            689999999999999999987652   11223345688999999554 45568889999999999999999999997432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhh------c--ccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDAN------L--LTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~------~--~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ... ........ ............      .  .............++..+.+++.+||+.||.+|||+.++++
T Consensus       224 ~~~-~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  296 (326)
T 1blx_A          224 DVD-QLGKILDV-IGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  296 (326)
T ss_dssp             HHH-HHHHHHHH-HCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHH-HHHHHHHH-cCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            111 11111110 000000000000      0  00000111112345667899999999999999999999985

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.86  E-value=2.4e-22  Score=136.33  Aligned_cols=126  Identities=20%  Similarity=0.267  Sum_probs=88.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||.++....  .........++..|+|||.+ ....++.++|+||+|+++|++++|..||....
T Consensus       144 p~NIl~~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  220 (279)
T 2w5a_A          144 PANVFLDGKQNVKLGDFGLARILNH--DTSFAKTFVGTPYYMSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPFTAFS  220 (279)
T ss_dssp             GGGEEECSSSCEEECCCCHHHHC-----CHHHHHHHSCCTTCCHHHH-HCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             hhhEEEcCCCCEEEecCchheeecc--ccccccccCCCccccChHHh-ccCCCCchhhHHHHHHHHHHHHHCCCCCcccC
Confidence            6899999999999999999876521  11122334688999999554 45567889999999999999999999987432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTEL  149 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l  149 (164)
                      .  ....            ..+......      ..+..++..+.+++.+||+.||.+|||+.++++.+
T Consensus       221 ~--~~~~------------~~i~~~~~~------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~  269 (279)
T 2w5a_A          221 Q--KELA------------GKIREGKFR------RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENP  269 (279)
T ss_dssp             H--HHHH------------HHHHHTCCC------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred             H--HHHH------------HHHhhcccc------cCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence            1  1111            111111110      11223456689999999999999999999998743

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.86  E-value=1.3e-22  Score=138.67  Aligned_cols=127  Identities=23%  Similarity=0.352  Sum_probs=86.9

Q ss_pred             CcceEecC-CceEEEeccccceeccCCCCccccccccccccccCchhhhcc-CcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDD-NMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGRE-GRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+||+++. ++.+||+|||.+..+...  ........++..|+|||.+... ..++.++|+||+|+++|++++|..||..
T Consensus       150 p~Nil~~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  227 (295)
T 2clq_A          150 GDNVLINTYSGVLKISDFGTSKRLAGI--NPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYE  227 (295)
T ss_dssp             GGGEEEETTTCCEEECCTTTCEESCC-------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGG
T ss_pred             hhhEEEECCCCCEEEeecccccccCCC--CCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccC
Confidence            68999987 899999999999875321  1122345688999999666443 2367899999999999999999999964


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .........            .   .....   .....+..++..+.+++.+||+.||++|||++++++
T Consensus       228 ~~~~~~~~~------------~---~~~~~---~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          228 LGEPQAAMF------------K---VGMFK---VHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             GSSHHHHHH------------H---HHHHC---CCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred             CCchhHHHH------------h---hcccc---ccccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            321111000            0   00000   000112344566889999999999999999999986

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.86  E-value=3.1e-22  Score=140.35  Aligned_cols=129  Identities=22%  Similarity=0.325  Sum_probs=87.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhcc-CcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGRE-GRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+|||++.++.+||+|||+++.+.... ........|++.|+|||.+... ..++.++||||+||++|++++|..||...
T Consensus       187 p~NIll~~~~~~kl~DfG~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~  265 (355)
T 1vzo_A          187 LENILLDSNGHVVLTDFGLSKEFVADE-TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVD  265 (355)
T ss_dssp             GGGEEECTTSCEEESCSSEEEECCGGG-GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCT
T ss_pred             HHHEEECCCCcEEEeeCCCCeecccCC-CCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccC
Confidence            689999999999999999998652211 1122345689999999666532 34678999999999999999999999743


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCC-----CHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRI-----NAKEIVT  147 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~vl~  147 (164)
                      ...... ......        ...    ...    ..+..++..+.+++.+||..||.+||     |++++++
T Consensus       266 ~~~~~~-~~~~~~--------~~~----~~~----~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~  321 (355)
T 1vzo_A          266 GEKNSQ-AEISRR--------ILK----SEP----PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  321 (355)
T ss_dssp             TSCCCH-HHHHHH--------HHH----CCC----CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             CccchH-HHHHHH--------Hhc----cCC----CCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHc
Confidence            222111 111100        000    000    11223455688999999999999999     8998876

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.86  E-value=1.3e-22  Score=138.75  Aligned_cols=123  Identities=19%  Similarity=0.292  Sum_probs=88.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||.+.....  .........++..|+|||.+ ....++.++|+||+|+++|++++|..||....
T Consensus       143 p~Nil~~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~  219 (294)
T 2rku_A          143 LGNLFLNEDLEVKIGDFGLATKVEY--DGERKKVLCGTPNYIAPEVL-SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC  219 (294)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECCS--TTCCBCCCCSCCSSCCHHHH-TTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred             hHhEEEcCCCCEEEEeccCceeccc--CccccccccCCCCcCCcchh-ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999987521  11223345688999999544 45567889999999999999999999996432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ....     .        ..... ..       ...+..++..+.+++.+||+.||++|||++++++
T Consensus       220 ~~~~-----~--------~~~~~-~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~  265 (294)
T 2rku_A          220 LKET-----Y--------LRIKK-NE-------YSIPKHINPVAASLIQKMLQTDPTARPTINELLN  265 (294)
T ss_dssp             HHHH-----H--------HHHHT-TC-------CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             HHHH-----H--------HHHhh-cc-------CCCccccCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence            1110     0        00000 00       0112234456889999999999999999999987

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.86  E-value=1.2e-22  Score=141.44  Aligned_cols=123  Identities=19%  Similarity=0.283  Sum_probs=88.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||++..+...  ........++..|++||.+ ....++.++|+||+|+++|++++|..||....
T Consensus       169 p~NIl~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  245 (335)
T 2owb_A          169 LGNLFLNEDLEVKIGDFGLATKVEYD--GERKKVLCGTPNYIAPEVL-SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC  245 (335)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECCST--TCCBCCCCSCCSSCCHHHH-HTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred             chhEEEcCCCCEEEeeccCceecccC--cccccccCCCccccCHHHh-ccCCCCchhhHHHHHHHHHHHHHCcCCCCCCC
Confidence            68999999999999999999875311  1223345688999999554 45667889999999999999999999996432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ....     .        ..+.. ...       ..+..++..+.+++.+||+.||++|||++++++
T Consensus       246 ~~~~-----~--------~~~~~-~~~-------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  291 (335)
T 2owb_A          246 LKET-----Y--------LRIKK-NEY-------SIPKHINPVAASLIQKMLQTDPTARPTINELLN  291 (335)
T ss_dssp             HHHH-----H--------HHHHH-TCC-------CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             HHHH-----H--------HHHhc-CCC-------CCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            1110     0        00000 000       012234456889999999999999999999987

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.86  E-value=3.5e-22  Score=142.37  Aligned_cols=129  Identities=20%  Similarity=0.235  Sum_probs=87.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhc------cCcccCccchHhHHHHHHHHHhcCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGR------EGRVSTNGDVYSFGIMLMEAFTRKK   74 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~------~~~~~~~~Di~s~g~~~~~~~~g~~   74 (164)
                      |+|||++.++.+||+|||+++.+.... ........||+.|+|||.+..      ...++.++|+||+||++|+|++|..
T Consensus       190 p~NILld~~g~vkL~DFGla~~~~~~~-~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~  268 (412)
T 2vd5_A          190 PDNILLDRCGHIRLADFGSCLKLRADG-TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQT  268 (412)
T ss_dssp             GGGEEECTTSCEEECCCTTCEECCTTS-CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSC
T ss_pred             HHHeeecCCCCEEEeechhheeccCCC-ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCC
Confidence            789999999999999999998753211 112234579999999976653      3457899999999999999999999


Q ss_pred             CCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCC---CCHHHHHH
Q 039452           75 PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERR---INAKEIVT  147 (164)
Q Consensus        75 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R---ps~~~vl~  147 (164)
                      ||........             ...++........   ...+..++..+.+++.+||. +|.+|   |+++++++
T Consensus       269 Pf~~~~~~~~-------------~~~i~~~~~~~~~---p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~  327 (412)
T 2vd5_A          269 PFYADSTAET-------------YGKIVHYKEHLSL---PLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT  327 (412)
T ss_dssp             TTCCSSHHHH-------------HHHHHTHHHHCCC---C----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred             CCCCCCHHHH-------------HHHHHhcccCcCC---CccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence            9974321110             0111110000000   00123456679999999999 99998   58888865

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.86  E-value=6.9e-22  Score=141.91  Aligned_cols=131  Identities=20%  Similarity=0.357  Sum_probs=85.1

Q ss_pred             CcceEecCC-------------ceEEEeccccceeccCCCCcc--ccccccccccccCchhhhc------cCcccCccch
Q 039452            1 PSNVLLDDN-------------MVAHLSDFGIAKLLIGEDQSM--TQTQTLATIGYMAPVEYGR------EGRVSTNGDV   59 (164)
Q Consensus         1 p~Nill~~~-------------~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~------~~~~~~~~Di   59 (164)
                      |+|||++.+             +.+||+|||+++.+.......  ......|++.|+|||.+..      ...++.++||
T Consensus       143 p~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~Di  222 (434)
T 2rio_A          143 PQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDI  222 (434)
T ss_dssp             GGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHH
T ss_pred             hHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhh
Confidence            689999754             489999999998763222111  1234568999999966643      2457889999


Q ss_pred             HhHHHHHHHHHh-cCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccC
Q 039452           60 YSFGIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPER  138 (164)
Q Consensus        60 ~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  138 (164)
                      ||+||++|++++ |..||.......   .            .++.... ............++..+.+++.+||+.||.+
T Consensus       223 wSlG~il~ellt~g~~Pf~~~~~~~---~------------~i~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  286 (434)
T 2rio_A          223 FSMGCVFYYILSKGKHPFGDKYSRE---S------------NIIRGIF-SLDEMKCLHDRSLIAEATDLISQMIDHDPLK  286 (434)
T ss_dssp             HHHHHHHHHHHTTSCCTTCSTTTHH---H------------HHHHTCC-CCCCCTTCCCHHHHHHHHHHHHHHTCSSGGG
T ss_pred             HhHHHHHHHHHhCCCCCCCCchhhH---H------------HHhcCCC-CcccccccccccchHHHHHHHHHHhhCChhh
Confidence            999999999998 899986432111   0            1111110 1111111122356677999999999999999


Q ss_pred             CCCHHHHHH
Q 039452          139 RINAKEIVT  147 (164)
Q Consensus       139 Rps~~~vl~  147 (164)
                      |||+.++++
T Consensus       287 Rps~~eil~  295 (434)
T 2rio_A          287 RPTAMKVLR  295 (434)
T ss_dssp             SCCHHHHHT
T ss_pred             CCCHHHHHh
Confidence            999999985

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.86  E-value=1.8e-22  Score=136.76  Aligned_cols=123  Identities=24%  Similarity=0.322  Sum_probs=80.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.++|+|||.+......   .......+++.|++||.+......+.++|+||+|+++|++++|..||....
T Consensus       139 p~Nil~~~~~~~~l~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~  215 (276)
T 2h6d_A          139 PENVLLDAHMNAKIADFGLSNMMSDG---EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH  215 (276)
T ss_dssp             GGGEEECTTSCEEECCCCGGGCCCC----------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             hhhEEECCCCCEEEeecccccccCCC---cceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc
Confidence            68999999999999999998765221   122344688999999666544444678999999999999999999986421


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .  ....            ..+.....       ..+..++..+.+++.+||+.||.+|||++++++
T Consensus       216 ~--~~~~------------~~~~~~~~-------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~  261 (276)
T 2h6d_A          216 V--PTLF------------KKIRGGVF-------YIPEYLNRSVATLLMHMLQVDPLKRATIKDIRE  261 (276)
T ss_dssp             H--HHHH------------HHHHHCCC-------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             H--HHHH------------HHhhcCcc-------cCchhcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence            1  1000            01111110       012234456889999999999999999999987

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.86  E-value=1.7e-22  Score=137.62  Aligned_cols=124  Identities=22%  Similarity=0.318  Sum_probs=81.7

Q ss_pred             CcceEe---cCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCC
Q 039452            1 PSNVLL---DDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         1 p~Nill---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      |+||++   +.++.+||+|||++..+..   ........++..|+|||.+.  ..++.++|+||+|+++|++++|..||.
T Consensus       152 p~NIl~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~t~~y~aPE~~~--~~~~~~~Di~slG~il~~ll~g~~pf~  226 (285)
T 3is5_A          152 PENILFQDTSPHSPIKIIDFGLAELFKS---DEHSTNAAGTALYMAPEVFK--RDVTFKCDIWSAGVVMYFLLTGCLPFT  226 (285)
T ss_dssp             GGGEEESSSSTTCCEEECCCCCCCC-------------CTTGGGCCHHHHT--TCCCHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             HHHEEEecCCCCCCEEEEeeecceecCC---cccCcCcccccCcCChHHhc--cCCCcccCeehHHHHHHHHHhCCCCCC
Confidence            689999   4568899999999976522   11223456899999996553  457789999999999999999999997


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .......  ..               ......... ......+++.+.+++.+||+.||++|||+.++++
T Consensus       227 ~~~~~~~--~~---------------~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          227 GTSLEEV--QQ---------------KATYKEPNY-AVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             CSSHHHH--HH---------------HHHHCCCCC-CC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             CCCHHHH--Hh---------------hhccCCccc-ccccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            4321110  00               000000000 0001123455889999999999999999999986

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.86  E-value=1.4e-22  Score=139.92  Aligned_cols=137  Identities=20%  Similarity=0.297  Sum_probs=92.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCcc-------ccccccccccccCchhhhccC--cccCccchHhHHHHHHHHHh
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSM-------TQTQTLATIGYMAPVEYGREG--RVSTNGDVYSFGIMLMEAFT   71 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~-------~~~~~~~~~~~~~pe~~~~~~--~~~~~~Di~s~g~~~~~~~~   71 (164)
                      |+||+++.++.+||+|||.+..........       ......|+..|+|||.+....  .++.++||||+|+++|++++
T Consensus       162 p~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~  241 (317)
T 2buj_A          162 PTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMF  241 (317)
T ss_dssp             GGGEEECTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHH
T ss_pred             HHHEEEcCCCCEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHh
Confidence            689999999999999999887642100000       012245689999996554322  26789999999999999999


Q ss_pred             cCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHH
Q 039452           72 RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSK  151 (164)
Q Consensus        72 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~  151 (164)
                      |..||...........            .......      .......++..+.+++.+||+.||.+|||+.++++.|..
T Consensus       242 g~~p~~~~~~~~~~~~------------~~~~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~  303 (317)
T 2buj_A          242 GEGPYDMVFQKGDSVA------------LAVQNQL------SIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEA  303 (317)
T ss_dssp             SSCTTHHHHHTTSCHH------------HHHHCC--------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCChhhhhcccchhh------------HHhhccC------CCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhh
Confidence            9999853211111110            0111100      011112345568999999999999999999999999988


Q ss_pred             HHHH
Q 039452          152 IRDS  155 (164)
Q Consensus       152 ~~~~  155 (164)
                      +...
T Consensus       304 ~~~~  307 (317)
T 2buj_A          304 LQPP  307 (317)
T ss_dssp             TCCC
T ss_pred             cCCC
Confidence            7643

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.86  E-value=6.7e-23  Score=140.53  Aligned_cols=127  Identities=18%  Similarity=0.268  Sum_probs=86.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhh----ccCcccCccchHhHHHHHHHHHhcCCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYG----REGRVSTNGDVYSFGIMLMEAFTRKKPT   76 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~----~~~~~~~~~Di~s~g~~~~~~~~g~~p~   76 (164)
                      |+||+++.++.+||+|||++.....  .........++..|+|||.+.    ....++.++|+||+|+++|++++|..||
T Consensus       145 p~Nil~~~~~~~kl~Dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~  222 (302)
T 2j7t_A          145 AGNVLMTLEGDIRLADFGVSAKNLK--TLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPH  222 (302)
T ss_dssp             GGGEEECTTSCEEECCCHHHHHHHH--HHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             HHHEEECCCCCEEEEECCCCccccc--cccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCC
Confidence            6899999999999999998754311  111122346889999996653    3555788999999999999999999998


Q ss_pred             CccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           77 DEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ........     .        ......     .......+..++..+.+++.+||+.||.+|||+.++++
T Consensus       223 ~~~~~~~~-----~--------~~~~~~-----~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          223 HELNPMRV-----L--------LKIAKS-----DPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             TTSCHHHH-----H--------HHHHHS-----CCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             ccCCHHHH-----H--------HHHhcc-----CCcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            74321110     0        000000     00111123344566899999999999999999999986

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.86  E-value=1.6e-22  Score=140.08  Aligned_cols=126  Identities=18%  Similarity=0.230  Sum_probs=81.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhc----cCcccCccchHhHHHHHHHHHhcCCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGR----EGRVSTNGDVYSFGIMLMEAFTRKKPT   76 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~----~~~~~~~~Di~s~g~~~~~~~~g~~p~   76 (164)
                      |+||+++.++.+||+|||++..+..  .........++..|+|||.+..    ...++.++|+||+|+++|++++|..||
T Consensus       157 p~NIl~~~~~~~kl~Dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~  234 (326)
T 2x7f_A          157 GQNVLLTENAEVKLVDFGVSAQLDR--TVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL  234 (326)
T ss_dssp             GGGEEECTTCCEEECCCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTT
T ss_pred             HHHEEEcCCCCEEEeeCcCceecCc--CccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCC
Confidence            6899999999999999999876521  1112234568999999966542    345788999999999999999999999


Q ss_pred             CccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           77 DEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ........  ..           .......      .......++..+.+++.+||..||.+|||++++++
T Consensus       235 ~~~~~~~~--~~-----------~~~~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          235 CDMHPMRA--LF-----------LIPRNPA------PRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMK  286 (326)
T ss_dssp             TTSCHHHH--HH-----------HHHHSCC------CCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             CCCcHHHH--HH-----------HhhcCcc------ccCCccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            64321110  00           0000000      00011233456889999999999999999999987

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.86  E-value=3e-22  Score=137.57  Aligned_cols=125  Identities=18%  Similarity=0.237  Sum_probs=87.8

Q ss_pred             CcceEe---cCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCC
Q 039452            1 PSNVLL---DDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         1 p~Nill---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      |+||++   +.++.++|+|||.+.....    .......+++.|+||| +.....++.++|+||+|+++|++++|..||.
T Consensus       134 p~NIl~~~~~~~~~~kl~Dfg~~~~~~~----~~~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  208 (304)
T 2jam_A          134 PENLLYLTPEENSKIMITDFGLSKMEQN----GIMSTACGTPGYVAPE-VLAQKPYSKAVDCWSIGVITYILLCGYPPFY  208 (304)
T ss_dssp             GGGCEESSSSTTCCEEBCSCSTTCCCCC----BTTHHHHSCCCBCCTT-TBSSCSCCHHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             HHHEEEecCCCCCCEEEccCCcceecCC----CccccccCCCCccChH-HhccCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence            689999   7788999999999875421    1223346889999995 4455668889999999999999999999996


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ....  ....            ..+.....   .........++..+.+++.+||..||++|||++++++
T Consensus       209 ~~~~--~~~~------------~~i~~~~~---~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (304)
T 2jam_A          209 EETE--SKLF------------EKIKEGYY---EFESPFWDDISESAKDFICHLLEKDPNERYTCEKALS  261 (304)
T ss_dssp             TSCH--HHHH------------HHHHHCCC---CCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             CCCH--HHHH------------HHHHcCCC---CCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            4321  1110            00111110   1111112345566899999999999999999999986

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.86  E-value=1.1e-22  Score=141.11  Aligned_cols=128  Identities=25%  Similarity=0.322  Sum_probs=72.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhh---ccCcccCccchHhHHHHHHHHHhcCCCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYG---REGRVSTNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~---~~~~~~~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      |+||+++.++.+||+|||+++.+...   .......|+..|+|||.+.   ....++.++|+||+|+++|++++|..||.
T Consensus       154 p~NIll~~~~~~kl~Dfg~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  230 (327)
T 3aln_A          154 PSNILLDRSGNIKLCDFGISGQLVDS---IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYP  230 (327)
T ss_dssp             GGGEEEETTTEEEECCCSSSCC---------------------------------CCSHHHHHHHHHHHHHHHHSCCCSS
T ss_pred             HHHEEEcCCCCEEEccCCCceecccc---cccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence            68999999999999999999765221   1223346889999996553   34457889999999999999999999996


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHhhhhccc-ccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVVDANLLT-REDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .......                .+...... ...........++..+.+++.+||+.||.+|||+.++++
T Consensus       231 ~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          231 KWNSVFD----------------QLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             CC-----------------------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CcchHHH----------------HHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence            4321100                00000000 000001111234556899999999999999999999976

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.86  E-value=1.4e-22  Score=138.96  Aligned_cols=136  Identities=19%  Similarity=0.267  Sum_probs=86.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCC---ccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQ---SMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      |+||+++.++.+||+|||.+..+.....   ........+++.|+|||.+.....++.++|+||+|+++|++++|..||.
T Consensus       149 p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  228 (303)
T 2vwi_A          149 AGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYH  228 (303)
T ss_dssp             GGGEEECTTCCEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             hhhEEEcCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCc
Confidence            6899999999999999999876532111   1112334688999999766544557889999999999999999999997


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .......... ...    ....      ..............++..+.+++.+||+.||.+|||+.++++
T Consensus       229 ~~~~~~~~~~-~~~----~~~~------~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          229 KYPPMKVLML-TLQ----NDPP------SLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR  287 (303)
T ss_dssp             TSCGGGHHHH-HHT----SSCC------CTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             cCchhhHHHH-Hhc----cCCC------ccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            5322221100 000    0000      000000000111234456889999999999999999999987

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.86  E-value=2.7e-22  Score=138.28  Aligned_cols=129  Identities=24%  Similarity=0.392  Sum_probs=82.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhc----------cCcccCccchHhHHHHHHHHH
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGR----------EGRVSTNGDVYSFGIMLMEAF   70 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~----------~~~~~~~~Di~s~g~~~~~~~   70 (164)
                      |+||+++. +.+||+|||++..+.............+++.|+|||.+..          ...++.++|+||+|+++|+++
T Consensus       155 p~NIl~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~  233 (313)
T 3cek_A          155 PANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT  233 (313)
T ss_dssp             GGGEEEET-TEEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHH
T ss_pred             cccEEEEC-CeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHH
Confidence            68999965 8899999999987532222222334568999999966543          135778899999999999999


Q ss_pred             hcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHH
Q 039452           71 TRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTE  148 (164)
Q Consensus        71 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  148 (164)
                      +|..||..........            ....+.....      ..+...+..+.+++.+||+.||.+|||++++++.
T Consensus       234 ~g~~pf~~~~~~~~~~------------~~~~~~~~~~------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  293 (313)
T 3cek_A          234 YGKTPFQQIINQISKL------------HAIIDPNHEI------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  293 (313)
T ss_dssp             HSSCTTTTCCSHHHHH------------HHHHCTTSCC------CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             hCCCchhhHHHHHHHH------------HHHHhccccc------CCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence            9999996432211111            1111111100      0111224458899999999999999999999863

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.86  E-value=9.5e-22  Score=141.05  Aligned_cols=129  Identities=19%  Similarity=0.280  Sum_probs=81.0

Q ss_pred             CcceEecC-----CceEEEeccccceeccCCCC-ccccccccccccccCchhhhc--cCcccCccchHhHHHHHHHHHh-
Q 039452            1 PSNVLLDD-----NMVAHLSDFGIAKLLIGEDQ-SMTQTQTLATIGYMAPVEYGR--EGRVSTNGDVYSFGIMLMEAFT-   71 (164)
Q Consensus         1 p~Nill~~-----~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~--~~~~~~~~Di~s~g~~~~~~~~-   71 (164)
                      |+|||++.     ...+||+|||+++.+..... ........||+.|+|||.+..  ...++.++||||+||++|++++ 
T Consensus       146 p~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~  225 (432)
T 3p23_A          146 PHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISE  225 (432)
T ss_dssp             TTSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTT
T ss_pred             HHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcC
Confidence            78999953     23578999999987532211 122334568999999966643  3446678999999999999999 


Q ss_pred             cCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           72 RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        72 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      |..||.......  ..            ......    ...........+..+.+++.+||+.||.+|||++++++
T Consensus       226 g~~pf~~~~~~~--~~------------~~~~~~----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          226 GSHPFGKSLQRQ--AN------------ILLGAC----SLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             SCBTTBSTTTHH--HH------------HHTTCC----CCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCCCcchhhHHH--HH------------HHhccC----CccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence            888885321110  00            000000    00001111233455789999999999999999999984

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.86  E-value=3.7e-22  Score=140.08  Aligned_cols=138  Identities=21%  Similarity=0.319  Sum_probs=87.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||+++.++.+||+|||++..+...    ......+++.|+|||. .....++.++|+||+|+++|++++|..||....
T Consensus       160 p~Nil~~~~~~~kl~Dfg~~~~~~~~----~~~~~~gt~~y~aPE~-~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  234 (360)
T 3eqc_A          160 PSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPER-LQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPD  234 (360)
T ss_dssp             GGGEEECTTCCEEECCCCCCHHHHHH----C----CCCCTTCCHHH-HTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCC
T ss_pred             HHHEEECCCCCEEEEECCCCcccccc----cccCCCCCCCeECHHH-HcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            68999999999999999998754211    1234568999999954 455668889999999999999999999997532


Q ss_pred             cCchhHHHHHHHhhhh---------------------------hhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccc
Q 039452           81 SGEMTLKRWINDLLSV---------------------------SVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTI  133 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  133 (164)
                      ....  ..........                           ...+.++......  ........++..+.+++.+||+
T Consensus       235 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~  310 (360)
T 3eqc_A          235 AKEL--ELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEP--PPKLPSGVFSLEFQDFVNKCLI  310 (360)
T ss_dssp             HHHH--HHHHC------------------------------CCCHHHHHHHHHHSC--CCCCCTTTSCHHHHHHHHHHHC
T ss_pred             HHHH--HHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccC--CCCCCcccccHHHHHHHHHHhh
Confidence            2111  1100000000                           0001111100000  0000112245668999999999


Q ss_pred             cCccCCCCHHHHHH
Q 039452          134 ESPERRINAKEIVT  147 (164)
Q Consensus       134 ~~p~~Rps~~~vl~  147 (164)
                      .||++|||++++++
T Consensus       311 ~dP~~Rpt~~ell~  324 (360)
T 3eqc_A          311 KNPAERADLKQLMV  324 (360)
T ss_dssp             SSTTTSCCHHHHHT
T ss_pred             cChhhCCCHHHHhh
Confidence            99999999999987

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.86  E-value=6.1e-22  Score=145.18  Aligned_cols=127  Identities=22%  Similarity=0.273  Sum_probs=88.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.+|.+||+|||+++.+...  ........||+.|+|||.+ .+..++.++|+||+||++|+|++|..||....
T Consensus       317 P~NILl~~~g~vkL~DFGla~~~~~~--~~~~~~~~GT~~Y~APE~l-~~~~~~~~~DiwSlGvilyelltG~~PF~~~~  393 (543)
T 3c4z_A          317 PENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYAGTPGFMAPELL-LGEEYDFSVDYFALGVTLYEMIAARGPFRARG  393 (543)
T ss_dssp             GGGEEECTTSCEEECCCTTCEECCTT--CCCBCCCCSCTTTSCHHHH-TTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTT
T ss_pred             hHHEEEeCCCCEEEeecceeeeccCC--CcccccccCCccccChhhh-cCCCCChHHhcCcchHHHHHHHhCCCCCCCCc
Confidence            78999999999999999999876321  1122345799999999554 45668899999999999999999999997532


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCH-----HHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINA-----KEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~-----~~vl~  147 (164)
                      .... ......        .+....        ...+..++..+.+++.+||+.||.+||++     +++++
T Consensus       394 ~~~~-~~~~~~--------~i~~~~--------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~  448 (543)
T 3c4z_A          394 EKVE-NKELKQ--------RVLEQA--------VTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT  448 (543)
T ss_dssp             CCCC-HHHHHH--------HHHHCC--------CCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred             cchh-HHHHHH--------HHhhcc--------cCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence            2111 111100        011100        01123445668999999999999999975     55653

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.86  E-value=6.6e-22  Score=134.81  Aligned_cols=125  Identities=18%  Similarity=0.231  Sum_probs=86.0

Q ss_pred             CcceEecC---CceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCC
Q 039452            1 PSNVLLDD---NMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         1 p~Nill~~---~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      |+||+++.   ++.+||+|||++......   .......++..|+|||.+. + .++.++|+||+|+++|++++|..||.
T Consensus       149 p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~-~-~~~~~~Di~slG~~l~~l~~g~~p~~  223 (287)
T 2wei_A          149 PENILLESKEKDCDIKIIDFGLSTCFQQN---TKMKDRIGTAYYIAPEVLR-G-TYDEKCDVWSAGVILYILLSGTPPFY  223 (287)
T ss_dssp             GGGEEESCSSTTCCEEECSTTGGGTBCCC---SSCSCHHHHHTTCCHHHHT-T-CCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             hhhEEEecCCCcccEEEeccCcceeecCC---CccccccCcccccChHHhc-C-CCCCchhhHhHHHHHHHHHhCCCCCC
Confidence            68999965   347999999998765221   1223345788999996553 2 47889999999999999999999997


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .....  ...            ..+....   ..........++..+.+++.+||+.||.+|||+.++++
T Consensus       224 ~~~~~--~~~------------~~~~~~~---~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  276 (287)
T 2wei_A          224 GKNEY--DIL------------KRVETGK---YAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (287)
T ss_dssp             CSSHH--HHH------------HHHHHCC---CCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCHH--HHH------------HHHHcCC---CCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence            43211  110            0111111   11111122344566899999999999999999999987

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.86  E-value=4.6e-22  Score=138.85  Aligned_cols=141  Identities=20%  Similarity=0.237  Sum_probs=89.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccC-ccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVST-NGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~-~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||.+......    ......++..|+|||.+.....++. ++|+||+|+++|++++|..||...
T Consensus       180 p~Nil~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  255 (348)
T 2pml_X          180 PSNILMDKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLK  255 (348)
T ss_dssp             GGGEEECTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             hHhEEEcCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            68999999999999999999875221    2344568899999966654435555 899999999999999999999753


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcc-cccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLL-TREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ........ .+..... ........... ............++..+.+++.+||+.||.+|||++++++
T Consensus       256 ~~~~~~~~-~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~  322 (348)
T 2pml_X          256 ISLVELFN-NIRTKNI-EYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK  322 (348)
T ss_dssp             SCSHHHHH-HHTSCCC-CCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             CcHHHHHH-HHhccCc-CCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            32111111 1100000 00000000000 0000001111345667899999999999999999999987

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.85  E-value=1.6e-21  Score=137.04  Aligned_cols=131  Identities=11%  Similarity=0.017  Sum_probs=94.0

Q ss_pred             CcceEecC-----------CceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHH
Q 039452            1 PSNVLLDD-----------NMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEA   69 (164)
Q Consensus         1 p~Nill~~-----------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~   69 (164)
                      |+|||++.           ++.+||+|||+++.+.............||..|+|||. ..+..++.++||||+||++|+|
T Consensus       200 p~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~DiwslG~il~el  278 (365)
T 3e7e_A          200 PDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEM-LSNKPWNYQIDYFGVAATVYCM  278 (365)
T ss_dssp             GGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHH-HTTCCBSTHHHHHHHHHHHHHH
T ss_pred             HHHEEecccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHH-hcCCCCCccccHHHHHHHHHHH
Confidence            78999988           89999999999987532223333445679999999954 4556689999999999999999


Q ss_pred             HhcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCC-CHHHHHHH
Q 039452           70 FTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRI-NAKEIVTE  148 (164)
Q Consensus        70 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-s~~~vl~~  148 (164)
                      ++|..||.....+...                     ........    .....+.+++..|+..+|.+|+ ++.++.+.
T Consensus       279 ltg~~pf~~~~~~~~~---------------------~~~~~~~~----~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~  333 (365)
T 3e7e_A          279 LFGTYMKVKNEGGECK---------------------PEGLFRRL----PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQK  333 (365)
T ss_dssp             HHSSCCCEEEETTEEE---------------------ECSCCTTC----SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHH
T ss_pred             HhCCCccccCCCCcee---------------------echhcccc----CcHHHHHHHHHHHcCCCCCCcchHHHHHHHH
Confidence            9999998542211100                     00000000    1133467899999999999995 78888888


Q ss_pred             HHHHHHHhh
Q 039452          149 LSKIRDSLF  157 (164)
Q Consensus       149 l~~~~~~~~  157 (164)
                      |+.+.+...
T Consensus       334 l~~~l~~~~  342 (365)
T 3e7e_A          334 LKKVFQQHY  342 (365)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHhh
Confidence            888877654

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.85  E-value=6.9e-22  Score=145.45  Aligned_cols=126  Identities=24%  Similarity=0.348  Sum_probs=89.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.+|.+||+|||+++.+....   ......||+.|+|||.+ ....++.++|+||+||++|+|++|..||....
T Consensus       314 PeNILld~~g~vKL~DFGla~~~~~~~---~~~~~~GT~~Y~APEvl-~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~  389 (576)
T 2acx_A          314 PENILLDDHGHIRISDLGLAVHVPEGQ---TIKGRVGTVGYMAPEVV-KNERYTFSPDWWALGCLLYEMIAGQSPFQQRK  389 (576)
T ss_dssp             GGGEEECTTSCEEECCCTTCEECCTTC---CEECCCSCGGGCCHHHH-TTCEESSHHHHHHHHHHHHHHHHSSCSSSCSS
T ss_pred             hheEEEeCCCCeEEEecccceecccCc---cccccCCCccccCHHHH-cCCCCCccchHHHHHHHHHHHHhCCCCCcccc
Confidence            689999999999999999998753211   22345799999999544 45668899999999999999999999997543


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCC-----CHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRI-----NAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~vl~  147 (164)
                      ..... ..         ....+....       ...+..++..+.+++.+||+.||.+||     +++++++
T Consensus       390 ~~~~~-~~---------i~~~i~~~~-------~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~  444 (576)
T 2acx_A          390 KKIKR-EE---------VERLVKEVP-------EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE  444 (576)
T ss_dssp             SCCCH-HH---------HHHHHHHCC-------CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred             cchhH-HH---------HHHHhhccc-------ccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence            21110 00         001111000       001233456689999999999999999     7788875

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.85  E-value=4.4e-22  Score=142.79  Aligned_cols=130  Identities=18%  Similarity=0.233  Sum_probs=89.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhc----cCcccCccchHhHHHHHHHHHhcCCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGR----EGRVSTNGDVYSFGIMLMEAFTRKKPT   76 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~----~~~~~~~~Di~s~g~~~~~~~~g~~p~   76 (164)
                      |+|||++.++.+||+|||+++.+... .........||+.|+|||.+..    ...++.++|+||+||++|+|++|..||
T Consensus       203 p~NILl~~~g~vkL~DFGla~~~~~~-~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf  281 (437)
T 4aw2_A          203 PDNILMDMNGHIRLADFGSCLKLMED-GTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF  281 (437)
T ss_dssp             GGGEEECTTSCEEECCCTTCEECCTT-SCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             HHHeeEcCCCCEEEcchhhhhhcccC-CCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCC
Confidence            78999999999999999999765321 1222334579999999966642    456889999999999999999999999


Q ss_pred             CccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccC--CCCHHHHHH
Q 039452           77 DEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPER--RINAKEIVT  147 (164)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rps~~~vl~  147 (164)
                      ........             ...++........+   .....+++.+.+++.+||..+|++  |++++++++
T Consensus       282 ~~~~~~~~-------------~~~i~~~~~~~~~p---~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~  338 (437)
T 4aw2_A          282 YAESLVET-------------YGKIMNHKERFQFP---TQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK  338 (437)
T ss_dssp             CCSSHHHH-------------HHHHHTHHHHCCCC---SSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred             CCCChhHH-------------HHhhhhccccccCC---cccccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence            74321111             01111100000000   001224566899999999998888  999999876

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.85  E-value=1.3e-21  Score=133.98  Aligned_cols=128  Identities=19%  Similarity=0.259  Sum_probs=80.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCC------------ccccccccccccccCchhhhccCcccCccchHhHHHHHHH
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQ------------SMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLME   68 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~   68 (164)
                      |+||+++.++.+||+|||.+........            ........++..|+|||.+.....++.++|+||+|+++|+
T Consensus       144 p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~  223 (303)
T 1zy4_A          144 PMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFE  223 (303)
T ss_dssp             GGGEEECTTSCEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHH
T ss_pred             HHhEEEcCCCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHH
Confidence            6899999999999999999876521110            1112345688999999766545568899999999999999


Q ss_pred             HHhcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           69 AFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        69 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      +++   ||....    ......         ..+...   ....+...+...+..+.+++.+||+.||.+|||+.++++
T Consensus       224 l~~---p~~~~~----~~~~~~---------~~~~~~---~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  283 (303)
T 1zy4_A          224 MIY---PFSTGM----ERVNIL---------KKLRSV---SIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN  283 (303)
T ss_dssp             HHS---CCSSHH----HHHHHH---------HHHHST---TCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHh---ccCCch----hHHHHH---------Hhcccc---ccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence            997   443210    000000         001110   001111122334455889999999999999999999986

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.85  E-value=5.7e-22  Score=136.55  Aligned_cols=116  Identities=27%  Similarity=0.335  Sum_probs=86.3

Q ss_pred             CcceEec-CCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLD-DNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~-~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+||+++ .++.+||+|||+++.+...    ......++..|++||.+......+.++|+||+|+++|++++|..||...
T Consensus       167 p~Nil~~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  242 (312)
T 2iwi_A          167 DENILIDLRRGCAKLIDFGSGALLHDE----PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD  242 (312)
T ss_dssp             GGGEEEETTTTEEEECCCSSCEECCSS----CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH
T ss_pred             hhhEEEeCCCCeEEEEEcchhhhcccC----cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh
Confidence            6899999 8899999999999875321    2234568899999966655444456899999999999999999998632


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .                   .......        ..+..++..+.+++.+||+.||++|||++++++
T Consensus       243 ~-------------------~~~~~~~--------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  283 (312)
T 2iwi_A          243 Q-------------------EILEAEL--------HFPAHVSPDCCALIRRCLAPKPSSRPSLEEILL  283 (312)
T ss_dssp             H-------------------HHHHTCC--------CCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             H-------------------HHhhhcc--------CCcccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            0                   0111100        011234556889999999999999999999987

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.85  E-value=5.1e-22  Score=138.26  Aligned_cols=129  Identities=16%  Similarity=0.165  Sum_probs=71.3

Q ss_pred             CcceEecC---CceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCC
Q 039452            1 PSNVLLDD---NMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         1 p~Nill~~---~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      |+||+++.   ++.+||+|||+++....    .......+++.|+||| +.....++.++|+||+|+++|++++|..||.
T Consensus       156 p~NIll~~~~~~~~~kl~Dfg~~~~~~~----~~~~~~~~t~~y~aPE-~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  230 (336)
T 3fhr_A          156 PENLLYTSKEKDAVLKLTDFGFAKETTQ----NALQTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGFPPFY  230 (336)
T ss_dssp             GGGEEESCSSTTCCEEECCCTTCEEC---------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-
T ss_pred             HHHEEEEecCCCceEEEeccccceeccc----cccccCCCCcCccChh-hhCCCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence            68999975   45699999999986521    1223456789999995 4456668889999999999999999999996


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ..........          ....+..   ............++..+.+++.+||+.||.+|||++++++
T Consensus       231 ~~~~~~~~~~----------~~~~~~~---~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  287 (336)
T 3fhr_A          231 SNTGQAISPG----------MKRRIRL---GQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN  287 (336)
T ss_dssp             ---------------------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             Cccchhhhhh----------HHHhhhc---cccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            4322111000          0000000   0001111112345666899999999999999999999997

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.83  E-value=9.9e-21  Score=128.71  Aligned_cols=118  Identities=15%  Similarity=0.168  Sum_probs=83.1

Q ss_pred             CcceEecCC-------------------ceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHh
Q 039452            1 PSNVLLDDN-------------------MVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS   61 (164)
Q Consensus         1 p~Nill~~~-------------------~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s   61 (164)
                      |+||+++.+                   ..+||+|||.+......      ....++..|+|||.+.....++.++||||
T Consensus       143 p~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~~Di~s  216 (289)
T 1x8b_A          143 PSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSP------QVEEGDSRFLANEVLQENYTHLPKADIFA  216 (289)
T ss_dssp             GGGEEEC--------------------CCCEEECCCTTCEETTCS------CCCCCCGGGCCHHHHTTCCTTHHHHHHHH
T ss_pred             HHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCc------cccCCCccccChhHhcCCCCCCchhhHHH
Confidence            689999844                   47899999999875221      22358899999977665546778999999


Q ss_pred             HHHHHHHHHhcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCC
Q 039452           62 FGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRIN  141 (164)
Q Consensus        62 ~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps  141 (164)
                      +|++++++++|..++...    ...            ..+.. ....      ..+..++..+.+++.+||+.||.+|||
T Consensus       217 lG~il~~l~~~~~~~~~~----~~~------------~~~~~-~~~~------~~~~~~~~~~~~li~~~l~~dp~~Rps  273 (289)
T 1x8b_A          217 LALTVVCAAGAEPLPRNG----DQW------------HEIRQ-GRLP------RIPQVLSQEFTELLKVMIHPDPERRPS  273 (289)
T ss_dssp             HHHHHHHHTTCCCCCSSS----HHH------------HHHHT-TCCC------CCSSCCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             HHHHHHHHhcCCCCCcch----hHH------------HHHHc-CCCC------CCCcccCHHHHHHHHHHhCCCcccCCC
Confidence            999999999998776421    000            01111 1100      112234566899999999999999999


Q ss_pred             HHHHHH
Q 039452          142 AKEIVT  147 (164)
Q Consensus       142 ~~~vl~  147 (164)
                      +.++++
T Consensus       274 ~~~ll~  279 (289)
T 1x8b_A          274 AMALVK  279 (289)
T ss_dssp             HHHHHT
T ss_pred             HHHHhh
Confidence            999986

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.78  E-value=5.2e-20  Score=137.21  Aligned_cols=137  Identities=18%  Similarity=0.196  Sum_probs=84.0

Q ss_pred             CcceEecCCc---eEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCC
Q 039452            1 PSNVLLDDNM---VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         1 p~Nill~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      |+||+++.++   .+||+|||.+......   .......++..|+||| +.....++.++|+||+|+++|++++|..||.
T Consensus       149 P~NILl~~~g~~~~vKL~DFG~a~~~~~~---~~~~~~~gt~~Y~APE-~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~  224 (676)
T 3qa8_A          149 PENIVLQPGPQRLIHKIIDLGYAKELDQG---ELCTEFVGTLQYLAPE-LLEQKKYTVTVDYWSFGTLAFECITGFRPFL  224 (676)
T ss_dssp             STTEEEECCSSSCEEEECSCCCCCBTTSC---CCCCCCCSCCTTCSSC-SSCCSCCSTTHHHHHHHHHHHHHHSSCSSCC
T ss_pred             HHHeEeecCCCceeEEEcccccccccccc---cccccccCCcccCChH-HhccCCCCchhHHHHHHHHHHHHHHCCCCCC
Confidence            7899998665   4899999999875221   2233457899999995 4456678899999999999999999999986


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHh-hhhc-----c-cccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHH
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVV-DANL-----L-TREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEI  145 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~-~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v  145 (164)
                      .....    ..+............. ....     . ............++..+.+++.+||..||.+|||++++
T Consensus       225 ~~~~~----~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el  295 (676)
T 3qa8_A          225 PNWQP----VQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN  295 (676)
T ss_dssp             SSCHH----HHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred             cccch----hhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence            42110    0000000000000000 0000     0 00011112234567789999999999999999999874

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.77  E-value=7e-19  Score=132.55  Aligned_cols=120  Identities=17%  Similarity=0.217  Sum_probs=86.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.+ .+||+|||+++.....      ....||+.|++||.+...  .+.++||||+||++|+|++|..||....
T Consensus       210 p~NIll~~~-~~kl~DFG~a~~~~~~------~~~~gt~~y~aPE~~~~~--~~~~sDi~slG~~l~~l~~g~~~~~~~~  280 (681)
T 2pzi_A          210 PENIMLTEE-QLKLIDLGAVSRINSF------GYLYGTPGFQAPEIVRTG--PTVATDIYTVGRTLAALTLDLPTRNGRY  280 (681)
T ss_dssp             GGGEEECSS-CEEECCCTTCEETTCC------SCCCCCTTTSCTTHHHHC--SCHHHHHHHHHHHHHHHHSCCCEETTEE
T ss_pred             hHHeEEeCC-cEEEEecccchhcccC------CccCCCccccCHHHHcCC--CCCceehhhhHHHHHHHHhCCCCCcccc
Confidence            789999885 8999999999875221      345689999999665433  3778999999999999999988875321


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCC-CHHHHHHHHHHHHHHh
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRI-NAKEIVTELSKIRDSL  156 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-s~~~vl~~l~~~~~~~  156 (164)
                      ....                       .    ........++.+.+++.+||+.||.+|| +++++...|..+.+..
T Consensus       281 ~~~~-----------------------~----~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~  330 (681)
T 2pzi_A          281 VDGL-----------------------P----EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLREV  330 (681)
T ss_dssp             CSSC-----------------------C----TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHHHH
T ss_pred             cccc-----------------------c----ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHHHh
Confidence            1100                       0    0001112345688999999999999999 5777877777766543

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.76  E-value=5.3e-19  Score=121.17  Aligned_cols=109  Identities=17%  Similarity=0.213  Sum_probs=73.8

Q ss_pred             CcceEecC---CceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCC
Q 039452            1 PSNVLLDD---NMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         1 p~Nill~~---~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      |+||+++.   ++.+||+|||++....                         ...++.++|+||+||++|++++|..||.
T Consensus       145 p~Nil~~~~~~~~~~kl~Dfg~a~~~~-------------------------~~~~~~~~DiwslG~il~el~tg~~pf~  199 (299)
T 3m2w_A          145 PENLLYTSKRPNAILKLTDFGFAKETT-------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFY  199 (299)
T ss_dssp             GGGEEESSSSTTCCEEECCCTTCEECT-------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             HHHEEEecCCCCCcEEEeccccccccc-------------------------cccCCchhhHHHHHHHHHHHHHCCCCCC
Confidence            68999997   7899999999987541                         1225578999999999999999999996


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .......             ......................++..+.+++.+||+.||.+|||++++++
T Consensus       200 ~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~  256 (299)
T 3m2w_A          200 SNHGLAI-------------SPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  256 (299)
T ss_dssp             C--------------------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCcchhh-------------hHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            4321110             00000000001111112222345677999999999999999999999987

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.68  E-value=2.2e-17  Score=112.52  Aligned_cols=112  Identities=12%  Similarity=0.028  Sum_probs=75.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.+|.+||++++                      |++|        ++.++||||+||++|+|++|..||....
T Consensus       157 p~NIll~~~g~~kl~~~~----------------------~~~~--------~~~~~Di~slG~il~elltg~~Pf~~~~  206 (286)
T 3uqc_A          157 PSRVRVSIDGDVVLAYPA----------------------TMPD--------ANPQDDIRGIGASLYALLVNRWPLPEAG  206 (286)
T ss_dssp             GGGEEEETTSCEEECSCC----------------------CCTT--------CCHHHHHHHHHHHHHHHHHSEECSCCCS
T ss_pred             cccEEEcCCCCEEEEecc----------------------ccCC--------CCchhHHHHHHHHHHHHHHCCCCCCcCC
Confidence            689999999999987433                      2233        5678999999999999999999997532


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhh
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLF  157 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~  157 (164)
                      ......              ...................++..+.+++.+||+.||.+| |+.++++.|.++.....
T Consensus       207 ~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~  268 (286)
T 3uqc_A          207 VRSGLA--------------PAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVAD  268 (286)
T ss_dssp             BCCCSE--------------ECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred             cchhhH--------------HHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCC
Confidence            211000              000000001111122234566779999999999999999 99999999999875543

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.63  E-value=7.4e-16  Score=107.14  Aligned_cols=119  Identities=13%  Similarity=0.093  Sum_probs=79.4

Q ss_pred             CcceEecCCc--------------------eEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchH
Q 039452            1 PSNVLLDDNM--------------------VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY   60 (164)
Q Consensus         1 p~Nill~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~   60 (164)
                      |+|||++.++                    .+||+|||+++....       ....||+.|+|||.+. +.. +.++|||
T Consensus       190 p~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-------~~~~gt~~y~aPE~~~-g~~-~~~~Diw  260 (336)
T 2vuw_A          190 WGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-------GIVVFCDVSMDEDLFT-GDG-DYQFDIY  260 (336)
T ss_dssp             GGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-------TEEECCCCTTCSGGGC-CCS-SHHHHHH
T ss_pred             HHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-------CcEEEeecccChhhhc-CCC-ccceehh
Confidence            7899999876                    899999999987521       2347899999996554 333 7789999


Q ss_pred             hHHHH-HHHHHhcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCC
Q 039452           61 SFGIM-LMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERR  139 (164)
Q Consensus        61 s~g~~-~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  139 (164)
                      |++++ .+++++|..||...        .+...    ....+..... .........+..+++.+.+++.+||+.|    
T Consensus       261 sl~~~~~~~~~~g~~p~~~~--------~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~s~~~~dli~~~L~~d----  323 (336)
T 2vuw_A          261 RLMKKENNNRWGEYHPYSNV--------LWLHY----LTDKMLKQMT-FKTKCNTPAMKQIKRKIQEFHRTMLNFS----  323 (336)
T ss_dssp             HHHHHHHTTCTTSCCTHHHH--------HHHHH----HHHHHHHTCC-CSSCCCSHHHHHHHHHHHHHHHHGGGSS----
T ss_pred             hhhCCCCcccccccCCCcch--------hhhhH----HHHhhhhhhc-cCcccchhhhhhcCHHHHHHHHHHhccC----
Confidence            98766 66677888887421        00000    0111111111 1112223345678888999999999977    


Q ss_pred             CCHHHHH
Q 039452          140 INAKEIV  146 (164)
Q Consensus       140 ps~~~vl  146 (164)
                       |+++++
T Consensus       324 -sa~e~l  329 (336)
T 2vuw_A          324 -SATDLL  329 (336)
T ss_dssp             -SHHHHH
T ss_pred             -CHHHHH
Confidence             888887

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.17  E-value=5.7e-13  Score=98.61  Aligned_cols=68  Identities=21%  Similarity=0.109  Sum_probs=38.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTR   72 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g   72 (164)
                      |+|||++.+|.+||+|||+++.+..  ........+||+.|++||.+..  .....+|+|++|++.+.+.++
T Consensus       367 PeNILL~~dg~vKL~DFGlAr~~~~--~~~~~~t~vGTp~YmAPE~l~g--~~~~~~d~~s~g~~~~~l~~~  434 (569)
T 4azs_A          367 PWNVMVDARQHARLIDFGSIVTTPQ--DCSWPTNLVQSFFVFVNELFAE--NKSWNGFWRSAPVHPFNLPQP  434 (569)
T ss_dssp             GGGEEECTTSCEEECCCTTEESCC-----CCSHHHHHHHHHHHHHHC-------------------CCCCTT
T ss_pred             hHhEEECCCCCEEEeecccCeeCCC--CCccccCceechhhccHHHhCC--CCCCcccccccccchhhhccc
Confidence            7999999999999999999987632  2223345679999999966542  355678999999987765443

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=98.29  E-value=7.4e-08  Score=71.07  Aligned_cols=74  Identities=19%  Similarity=0.185  Sum_probs=53.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCcc-----ccccccccccccCchhhhcc-CcccCccchHhHHHHHHHHHhcCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSM-----TQTQTLATIGYMAPVEYGRE-GRVSTNGDVYSFGIMLMEAFTRKK   74 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~-----~~~~~~~~~~~~~pe~~~~~-~~~~~~~Di~s~g~~~~~~~~g~~   74 (164)
                      |+|||++.  .+||+|||+++.........     ......||+.|++||.+... ..++...|+|+..+-..+...++.
T Consensus       459 p~NILl~~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~  536 (540)
T 3en9_A          459 TSNFIFDK--DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRA  536 (540)
T ss_dssp             TTSEEESS--SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCS
T ss_pred             HHHEEECC--eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcc
Confidence            78999998  89999999998762211111     12345789999999655431 336677899999888888777666


Q ss_pred             CC
Q 039452           75 PT   76 (164)
Q Consensus        75 p~   76 (164)
                      +|
T Consensus       537 rY  538 (540)
T 3en9_A          537 RY  538 (540)
T ss_dssp             CC
T ss_pred             cc
Confidence            55

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=96.39  E-value=0.0018  Score=43.84  Aligned_cols=22  Identities=23%  Similarity=0.199  Sum_probs=20.0

Q ss_pred             CcceEecCCceEEEeccccceec
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLL   23 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~   23 (164)
                      |+|||++ ++.+||+|||+++..
T Consensus       221 p~NILl~-~~~vkl~DFG~a~~~  242 (282)
T 1zar_A          221 QYNVLVS-EEGIWIIDFPQSVEV  242 (282)
T ss_dssp             TTSEEEE-TTEEEECCCTTCEET
T ss_pred             HHHEEEE-CCcEEEEECCCCeEC
Confidence            7899999 999999999998753

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=95.03  E-value=0.015  Score=38.67  Aligned_cols=21  Identities=29%  Similarity=0.303  Sum_probs=18.7

Q ss_pred             CcceEecCCceEEEeccccceec
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLL   23 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~   23 (164)
                      |+|||++.  .++|+|||++...
T Consensus       199 p~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          199 EYNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             TTSEEESS--SEEECCCTTCEET
T ss_pred             HHHEEEcC--cEEEEECcccccC
Confidence            78999998  8999999999764

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=92.17  E-value=0.3  Score=31.81  Aligned_cols=40  Identities=18%  Similarity=0.212  Sum_probs=24.1

Q ss_pred             cCccchHhHHHHHHHHHhcCCCCCccccCchhHHHHHHHh
Q 039452           54 STNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDL   93 (164)
Q Consensus        54 ~~~~Di~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~   93 (164)
                      +.+.=|||+|+++|.-+--..|-.....-...+.+.+..+
T Consensus       114 te~~~IysLG~tLY~ALDygL~e~eE~eLS~~LE~LL~~M  153 (229)
T 2yle_A          114 METEVIESLGIIIYKALDYGLKENEERELSPPLEQLIDHM  153 (229)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCTTEEECCCHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHhhcCCCcccchhhCHHHHHHHHHH
Confidence            4556799999999998865555433223333444444433

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=85.71  E-value=0.26  Score=33.40  Aligned_cols=22  Identities=32%  Similarity=0.631  Sum_probs=18.2

Q ss_pred             CcceEecC--CceEEEecccccee
Q 039452            1 PSNVLLDD--NMVAHLSDFGIAKL   22 (164)
Q Consensus         1 p~Nill~~--~~~~kl~dfg~~~~   22 (164)
                      |.||+++.  .+.+.|.||+.+..
T Consensus       200 ~~N~l~~~~~~~~~~~iD~~~~~~  223 (304)
T 3sg8_A          200 SDHILFDTEKNTICGIIDFGDAAI  223 (304)
T ss_dssp             GGGEEEETTTTEEEEECCCTTCEE
T ss_pred             cccEEEeCCCCCEEEEEeCCCCcc
Confidence            57999987  56788999998865

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=83.50  E-value=0.59  Score=30.46  Aligned_cols=22  Identities=14%  Similarity=0.317  Sum_probs=17.7

Q ss_pred             CcceEecCCceEEEecccccee
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKL   22 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~   22 (164)
                      |.||+++.++.+.|.||+.+..
T Consensus       193 ~~Nil~~~~~~~~liD~~~a~~  214 (264)
T 1nd4_A          193 LPNIMVENGRFSGFIDCGRLGV  214 (264)
T ss_dssp             GGGEEEETTEEEEECCCTTCEE
T ss_pred             CCcEEEECCcEEEEEcchhccc
Confidence            5799998777677999998754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	164
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-28
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-23
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	3e-23
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	5e-23
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	8e-23
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-22
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	1e-21
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	4e-21
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	9e-21
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-20
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	2e-20
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	3e-20
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	6e-20
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	1e-19
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	3e-19
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	3e-19
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	3e-19
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	7e-19
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-18
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-18
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	3e-18
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	4e-18
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	6e-18
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	1e-17
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	4e-17
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	8e-17
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	1e-16
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	4e-15
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	7e-15
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-14
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-14
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	2e-14
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-14
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	2e-13
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	3e-13
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	8e-13
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-12
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	5e-12
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	5e-12
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	9e-12
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	3e-11
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	4e-11
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	5e-11
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	6e-11
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	6e-11
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	7e-11
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	9e-11
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	9e-11
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-10
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	5e-10
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	1e-09
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	1e-09
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	2e-09
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	3e-09
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	8e-09
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	8e-09
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	3e-08
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	6e-08
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	2e-07
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	8e-07
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	2e-06
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	9e-05

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  103 bits (259), Expect = 2e-28
 Identities = 34/158 (21%), Positives = 62/158 (39%), Gaps = 17/158 (10%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP--VEYGREGRVSTNGD 58
            +N+ L +++   + DFG+A +      S    Q   +I +MAP  +    +   S   D
Sbjct: 132 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 191

Query: 59  VYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQ 118
           VY+FGI+L E  T + P   + + +  +       LS  + +V                 
Sbjct: 192 VYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRS--------------- 236

Query: 119 QCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
            C   +  L  EC  +  + R    +I+  +  +  SL
Sbjct: 237 NCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 274

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.8 bits (227), Expect = 1e-23
 Identities = 29/163 (17%), Positives = 55/163 (33%), Gaps = 8/163 (4%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMT--QTQTLATIGYMAP-----VEYGREGRV 53
             N+L+  N    ++D G+A        ++       + T  YMAP         +    
Sbjct: 136 SKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFES 195

Query: 54  STNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVM-EVVDANLLTREDR 112
               D+Y+ G++  E   R          ++     +    SV  M +VV    L     
Sbjct: 196 FKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIP 255

Query: 113 HFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDS 155
           +     + +  +  +  EC   +   R+ A  I   LS++   
Sbjct: 256 NRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.7 bits (224), Expect = 3e-23
 Identities = 35/156 (22%), Positives = 65/156 (41%), Gaps = 21/156 (13%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLI-GEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
             N+L++ N+V  +SDFG++++L    + + T +     I + AP E     + ++  DV
Sbjct: 138 ARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAP-EAISYRKFTSASDV 196

Query: 60  YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQ 119
           +SFGI++ E  T  +      S    +K   +                            
Sbjct: 197 WSFGIVMWEVMTYGERPYWELSNHEVMKAINDGF-------------------RLPTPMD 237

Query: 120 CVSFVFNLAMECTIESPERRINAKEIVTELSKIRDS 155
           C S ++ L M+C  +   RR    +IV+ L K+  +
Sbjct: 238 CPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 273

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.4 bits (221), Expect = 5e-23
 Identities = 33/155 (21%), Positives = 64/155 (41%), Gaps = 21/155 (13%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
             N L+ +N V  +SDFG+ + ++ +  + +   T   + + +P E     R S+  DV+
Sbjct: 129 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG-TKFPVKWASP-EVFSFSRYSSKSDVW 186

Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           SFG+++ E F+  K   E  S    ++             +    L +            
Sbjct: 187 SFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF------RLYKPRLASTH---------- 230

Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDS 155
              V+ +   C  E PE R     ++ +L++I +S
Sbjct: 231 ---VYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 262

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.8 bits (222), Expect = 8e-23
 Identities = 33/160 (20%), Positives = 65/160 (40%), Gaps = 22/160 (13%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGED--QSMTQTQTLATIGYMAPVEYGREGRVSTNGD 58
             N +LD+     ++DFG+A+ +  ++      +T     + +MA  E  +  + +T  D
Sbjct: 158 ARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL-ESLQTQKFTTKSD 216

Query: 59  VYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQ 118
           V+SFG++L E  TR  P       ++        LL               + R     +
Sbjct: 217 VWSFGVLLWELMTRGAP----PYPDVNTFDITVYLL---------------QGRRLLQPE 257

Query: 119 QCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFR 158
            C   ++ + ++C     E R +  E+V+ +S I  +   
Sbjct: 258 YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 297

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.6 bits (219), Expect = 1e-22
 Identities = 34/156 (21%), Positives = 61/156 (39%), Gaps = 21/156 (13%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
            +N+L+ +N+V  ++DFG+A+L I +++   +      I + AP E    GR +   DV+
Sbjct: 141 AANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 198

Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           SFGI+L E  T+ +           L +                              +C
Sbjct: 199 SFGILLTELTTKGRVPYPGMVNREVLDQVERGY-------------------RMPCPPEC 239

Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
              + +L  +C  + PE R   + +   L     S 
Sbjct: 240 PESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 275

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 86.3 bits (213), Expect = 1e-21
 Identities = 34/155 (21%), Positives = 66/155 (42%), Gaps = 23/155 (14%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL---ATIGYMAPVEYGREGRVSTNG 57
             N+L++ N+V  +SDFG+++ L  +    T T  L     I + AP E  +  + ++  
Sbjct: 156 ARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP-EAIQYRKFTSAS 214

Query: 58  DVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAK 117
           DV+S+GI++ E  +  +     +                +  +V++A     +D      
Sbjct: 215 DVWSYGIVMWEVMSYGER---PYWDM-------------TNQDVINA---IEQDYRLPPP 255

Query: 118 QQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
             C S +  L ++C  +    R    +IV  L K+
Sbjct: 256 MDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 290

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 85.3 bits (210), Expect = 4e-21
 Identities = 34/152 (22%), Positives = 60/152 (39%), Gaps = 20/152 (13%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
             N L+ +NMV  ++DFG+++ +   D           I +M P E     R +T  DV+
Sbjct: 168 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPP-ESIFYNRYTTESDVW 226

Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           ++G++L E F+         + E  +              V D N+L   +        C
Sbjct: 227 AYGVVLWEIFSYGLQPYYGMAHEEVIYY------------VRDGNILACPE-------NC 267

Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
              ++NL   C  + P  R +   I   L ++
Sbjct: 268 PLELYNLMRLCWSKLPADRPSFCSIHRILQRM 299

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.6 bits (206), Expect = 9e-21
 Identities = 26/152 (17%), Positives = 60/152 (39%), Gaps = 21/152 (13%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
             N L++D  V  +SDFG+++ ++ +D+  +   +   + +  P E     + S+  D++
Sbjct: 128 ARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPP-EVLMYSKFSSKSDIW 185

Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           +FG+++ E ++  K   E F+   T +     L                           
Sbjct: 186 AFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL-------------------RLYRPHLA 226

Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
              V+ +   C  E  + R   K +++ +  +
Sbjct: 227 SEKVYTIMYSCWHEKADERPTFKILLSNILDV 258

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.2 bits (205), Expect = 2e-20
 Identities = 30/155 (19%), Positives = 55/155 (35%), Gaps = 21/155 (13%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
            +N+L+ D +   ++DFG+A+L I +++   +      I + AP      G  +   DV+
Sbjct: 137 AANILVSDTLSCKIADFGLARL-IEDNEYTAREGAKFPIKWTAPEAI-NYGTFTIKSDVW 194

Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           SFGI+L E  T  +      +    ++                                C
Sbjct: 195 SFGILLTEIVTHGRIPYPGMTNPEVIQNL-------------------ERGYRMVRPDNC 235

Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDS 155
              ++ L   C  E PE R     + + L     +
Sbjct: 236 PEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.3 bits (205), Expect = 2e-20
 Identities = 29/152 (19%), Positives = 54/152 (35%), Gaps = 20/152 (13%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
             NVL+       ++DFG+AKLL  E++          I +MA  E       +   DV+
Sbjct: 139 ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL-ESILHRIYTHQSDVW 197

Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           S+G+ + E  T      +                            +  +         C
Sbjct: 198 SYGVTVWELMTFGSKPYDGIPASEISS-------------------ILEKGERLPQPPIC 238

Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
              V+ + ++C +   + R   +E++ E SK+
Sbjct: 239 TIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 270

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.4 bits (203), Expect = 3e-20
 Identities = 36/153 (23%), Positives = 59/153 (38%), Gaps = 25/153 (16%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
             NVL+ ++ VA +SDFG+ K       S TQ      + + AP E  RE + ST  DV+
Sbjct: 131 ARNVLVSEDNVAKVSDFGLTKEA-----SSTQDTGKLPVKWTAP-EALREKKFSTKSDVW 184

Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           SFGI+L E ++  +        +  + R                     +     A   C
Sbjct: 185 SFGILLWEIYSFGRVPYPRIPLKDVVPRV-------------------EKGYKMDAPDGC 225

Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIR 153
              V+ +   C       R +  ++  +L  I+
Sbjct: 226 PPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 258

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.1 bits (202), Expect = 6e-20
 Identities = 26/149 (17%), Positives = 52/149 (34%), Gaps = 19/149 (12%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
             NVL+    V  + DFG+A+ ++ +   + +      + +MAP E   EG  +   DV+
Sbjct: 192 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAP-ESLFEGIYTIKSDVW 250

Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           S+GI+L E F+           +    + I                  +           
Sbjct: 251 SYGILLWEIFSLGVNPYPGIPVDANFYKLI------------------QNGFKMDQPFYA 292

Query: 121 VSFVFNLAMECTIESPERRINAKEIVTEL 149
              ++ +   C      +R +   + + L
Sbjct: 293 TEEIYIIMQSCWAFDSRKRPSFPNLTSFL 321

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 80.9 bits (199), Expect = 1e-19
 Identities = 30/152 (19%), Positives = 52/152 (34%), Gaps = 21/152 (13%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
             N L+ +N +  ++DFG+++L+ G D           I + AP E     + S   DV+
Sbjct: 143 ARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP-ESLAYNKFSIKSDVW 200

Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           +FG++L E  T               +                      +D      + C
Sbjct: 201 AFGVLLWEIATYGMSPYPGIDLSQVYELL-------------------EKDYRMERPEGC 241

Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
              V+ L   C   +P  R +  EI      +
Sbjct: 242 PEKVYELMRACWQWNPSDRPSFAEIHQAFETM 273

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.1 bits (197), Expect = 3e-19
 Identities = 33/161 (20%), Positives = 59/161 (36%), Gaps = 21/161 (13%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDV 59
             NVLL +   A +SDFG++K L  +D   T        + + AP E     + S+  DV
Sbjct: 137 ARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAP-ECINFRKFSSRSDV 195

Query: 60  YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQ 119
           +S+G+ + EA +  +   +   G   +                       + +      +
Sbjct: 196 WSYGVTMWEALSYGQKPYKKMKGPEVMAFI-------------------EQGKRMECPPE 236

Query: 120 CVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNV 160
           C   ++ L  +C I   E R +   +   +     SL   V
Sbjct: 237 CPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKV 277

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.6 bits (196), Expect = 3e-19
 Identities = 27/147 (18%), Positives = 55/147 (37%), Gaps = 25/147 (17%)

Query: 1   PSNVLLDD-NMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
             N+ +        + D G+A L      S  +   + T  +MAP E   E +   + DV
Sbjct: 142 CDNIFITGPTGSVKIGDLGLATLK---RASFAKA-VIGTPEFMAP-EM-YEEKYDESVDV 195

Query: 60  YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQ 119
           Y+FG+ ++E  T + P  E  +     +R  + +   S  +V    +             
Sbjct: 196 YAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVK------------ 243

Query: 120 CVSFVFNLAMECTIESPERRINAKEIV 146
                  +   C  ++ + R + K+++
Sbjct: 244 ------EIIEGCIRQNKDERYSIKDLL 264

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.9 bits (196), Expect = 3e-19
 Identities = 37/160 (23%), Positives = 70/160 (43%), Gaps = 20/160 (12%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
             N ++ ++    + DFG+ + +   D      + L  + +M+P E  ++G  +T  DV+
Sbjct: 161 ARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP-ESLKDGVFTTYSDVW 219

Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           SFG++L E  T  +   +  S E  L+             V++  LL + D        C
Sbjct: 220 SFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD-------NC 260

Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNV 160
              +F L   C   +P+ R +  EI++ + +  +  FR V
Sbjct: 261 PDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 300

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.5 bits (193), Expect = 7e-19
 Identities = 32/145 (22%), Positives = 56/145 (38%), Gaps = 18/145 (12%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P N+LLD+     +SDFG+A +    ++     +   T+ Y+AP    R    +   DV+
Sbjct: 131 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 190

Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           S GI+L      + P D+          W      ++  + +D+  L             
Sbjct: 191 SCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL------------- 237

Query: 121 VSFVFNLAMECTIESPERRINAKEI 145
                 L  +  +E+P  RI   +I
Sbjct: 238 -----ALLHKILVENPSARITIPDI 257

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.4 bits (192), Expect = 1e-18
 Identities = 29/155 (18%), Positives = 57/155 (36%), Gaps = 19/155 (12%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
             N+LL +  V  + DFG+A+ +  +   + +      + +MAP E   +   +   DV+
Sbjct: 162 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP-ETIFDRVYTIQSDVW 220

Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           SFG++L E F+           +    R +                  +E     A    
Sbjct: 221 SFGVLLWEIFSLGASPYPGVKIDEEFCRRL------------------KEGTRMRAPDYT 262

Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDS 155
              ++   ++C    P +R    E+V  L  +  +
Sbjct: 263 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 297

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.9 bits (191), Expect = 2e-18
 Identities = 28/152 (18%), Positives = 56/152 (36%), Gaps = 19/152 (12%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
             N+LL    +  + DFG+A+ +  +   + +      + +MAP E       +   DV+
Sbjct: 173 ARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAP-ESIFNCVYTFESDVW 231

Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           S+GI L E F+           +    + I                  +E     + +  
Sbjct: 232 SYGIFLWELFSLGSSPYPGMPVDSKFYKMI------------------KEGFRMLSPEHA 273

Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
            + ++++   C    P +R   K+IV  + K 
Sbjct: 274 PAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 305

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.5 bits (190), Expect = 3e-18
 Identities = 34/160 (21%), Positives = 65/160 (40%), Gaps = 23/160 (14%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
             N+L+ +N VA ++DFG+++   G++  + +T     + +MA  E       +TN DV+
Sbjct: 155 ARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRWMAI-ESLNYSVYTTNSDVW 210

Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           S+G++L E  +            MT       L                +         C
Sbjct: 211 SYGVLLWEIVSLGGT----PYCGMTCAELYEKL---------------PQGYRLEKPLNC 251

Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNV 160
              V++L  +C  E P  R +  +I+  L+++ +     V
Sbjct: 252 DDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYV 291

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.7 bits (188), Expect = 4e-18
 Identities = 32/153 (20%), Positives = 54/153 (35%), Gaps = 21/153 (13%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDV 59
             NVLL     A +SDFG++K L  ++            + + AP E     + S+  DV
Sbjct: 135 ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP-ECINYYKFSSKSDV 193

Query: 60  YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQ 119
           +SFG+++ EAF+  +     + G                 EV     +  +         
Sbjct: 194 WSFGVLMWEAFSYGQK---PYRGM-------------KGSEVTA---MLEKGERMGCPAG 234

Query: 120 CVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
           C   +++L   C     E R     +   L   
Sbjct: 235 CPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 267

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.3 bits (187), Expect = 6e-18
 Identities = 30/154 (19%), Positives = 55/154 (35%), Gaps = 20/154 (12%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLI-GEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
             N+LL    +  + DFG+ + L   +D  + Q        + AP E  +    S   D 
Sbjct: 139 ARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP-ESLKTRTFSHASDT 197

Query: 60  YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQ 119
           + FG+ L E FT  +      +G   L +                  + +E       + 
Sbjct: 198 WMFGVTLWEMFTYGQEPWIGLNGSQILHK------------------IDKEGERLPRPED 239

Query: 120 CVSFVFNLAMECTIESPERRINAKEIVTELSKIR 153
           C   ++N+ ++C    PE R     +   L + +
Sbjct: 240 CPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 273

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.4 bits (185), Expect = 1e-17
 Identities = 31/146 (21%), Positives = 49/146 (33%), Gaps = 23/146 (15%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P+NV LD      L DFG+A++L   D S  +     T  YM+P E       +   D++
Sbjct: 142 PANVFLDGKQNVKLGDFGLARIL-NHDTSFAKAFV-GTPYYMSP-EQMNRMSYNEKSDIW 198

Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           S G +L E      P                     S  E+       RE +      + 
Sbjct: 199 SLGCLLYELCALMPPFTAF-----------------SQKELAGK---IREGKFRRIPYRY 238

Query: 121 VSFVFNLAMECTIESPERRINAKEIV 146
              +  +           R + +EI+
Sbjct: 239 SDELNEIITRMLNLKDYHRPSVEEIL 264

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.3 bits (182), Expect = 4e-17
 Identities = 30/168 (17%), Positives = 57/168 (33%), Gaps = 28/168 (16%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           PSN+L++      L DFG++  L     SM  +    T  YM+P E  +    S   D++
Sbjct: 133 PSNILVNSRGEIKLCDFGVSGQL---IDSMANSFV-GTRSYMSP-ERLQGTHYSVQSDIW 187

Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           S G+ L+E    + P     + E+ L          +               +    +  
Sbjct: 188 SMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPP 247

Query: 121 VSF-----------------------VFNLAMECTIESPERRINAKEI 145
           ++                          +   +C I++P  R + K++
Sbjct: 248 MAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 295

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.3 bits (179), Expect = 8e-17
 Identities = 31/154 (20%), Positives = 54/154 (35%), Gaps = 21/154 (13%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
             NVL+  N    L DFG+++ +  +      ++    I +MAP E     R ++  DV+
Sbjct: 136 ARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAP-ESINFRRFTSASDVW 193

Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
            FG+ + E         +       + R  N                            C
Sbjct: 194 MFGVCMWEILMHGVKPFQGVKNNDVIGRIEN-------------------GERLPMPPNC 234

Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRD 154
              +++L  +C    P RR    E+  +LS I +
Sbjct: 235 PPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 268

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.6 bits (177), Expect = 1e-16
 Identities = 34/152 (22%), Positives = 60/152 (39%), Gaps = 20/152 (13%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
             NVL+ ++ V  ++DFG+A+ +   D     T     + +MAP E   +   +   DV+
Sbjct: 163 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP-EALFDRIYTHQSDVW 221

Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           SFG++L E FT           E   K                     +E         C
Sbjct: 222 SFGVLLWEIFTLGGSPYPGVPVEELFKLL-------------------KEGHRMDKPSNC 262

Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
            + ++ +  +C    P +R   K++V +L +I
Sbjct: 263 TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 294

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 68.9 bits (168), Expect = 4e-15
 Identities = 28/148 (18%), Positives = 50/148 (33%), Gaps = 27/148 (18%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP--VEYGREGRVSTNGD 58
             N+LL +  +  L DFG A ++            + T  +MAP  +    EG+     D
Sbjct: 143 AGNILLSEPGLVKLGDFGSASIM------APANSFVGTPYWMAPEVILAMDEGQYDGKVD 196

Query: 59  VYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQ 118
           V+S GI  +E   RK P   M +                         + + +       
Sbjct: 197 VWSLGITCIELAERKPPLFNMNAMSALYH-------------------IAQNESPALQSG 237

Query: 119 QCVSFVFNLAMECTIESPERRINAKEIV 146
               +  N    C  + P+ R  ++ ++
Sbjct: 238 HWSEYFRNFVDSCLQKIPQDRPTSEVLL 265

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.7 bits (165), Expect = 7e-15
 Identities = 24/146 (16%), Positives = 43/146 (29%), Gaps = 26/146 (17%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P N+LL       ++DFG +       ++        T+ Y+ P E           D++
Sbjct: 134 PENLLLGSAGELKIADFGWSVHAPSSRRTTLCG----TLDYLPP-EMIEGRMHDEKVDLW 188

Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           S G++  E    K P    F                +  E             F      
Sbjct: 189 SLGVLCYEFLVGKPP----FEAN-------------TYQETYKRIS----RVEFTFPDFV 227

Query: 121 VSFVFNLAMECTIESPERRINAKEIV 146
                +L       +P +R   +E++
Sbjct: 228 TEGARDLISRLLKHNPSQRPMLREVL 253

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.3 bits (164), Expect = 1e-14
 Identities = 27/149 (18%), Positives = 49/149 (32%), Gaps = 24/149 (16%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP----VEYGREGRVSTN 56
             N+L   +    L+DFG++       Q         T  +MAP     E  ++      
Sbjct: 138 AGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI--GTPYWMAPEVVMCETSKDRPYDYK 195

Query: 57  GDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAA 116
            DV+S GI L+E    + P                     + M V+   +   E    A 
Sbjct: 196 ADVWSLGITLIEMAEIEPP----HHEL-------------NPMRVLL-KIAKSEPPTLAQ 237

Query: 117 KQQCVSFVFNLAMECTIESPERRINAKEI 145
             +  S   +   +C  ++ + R    ++
Sbjct: 238 PSRWSSNFKDFLKKCLEKNVDARWTTSQL 266

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.3 bits (164), Expect = 1e-14
 Identities = 29/145 (20%), Positives = 45/145 (31%), Gaps = 21/145 (14%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
             N+LL  +    L+DFG    +  E    +      T  +MAP E           D++
Sbjct: 144 SDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVG--TPYWMAP-EVVTRKAYGPKVDIW 200

Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           S GIM +E    + P               N    +   E + A                
Sbjct: 201 SLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFR------------- 247

Query: 121 VSFVFNLAMECTIESPERRINAKEI 145
                +    C     E+R +AKE+
Sbjct: 248 -----DFLNRCLDMDVEKRGSAKEL 267

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 66.7 bits (162), Expect = 2e-14
 Identities = 37/156 (23%), Positives = 68/156 (43%), Gaps = 20/156 (12%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDV 59
           P+N+++       + DFGIA+ +     S+TQT  +  T  Y++P E  R   V    DV
Sbjct: 139 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP-EQARGDSVDARSDV 197

Query: 60  YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQ 119
           YS G +L E  T + P    F+G+             S + V   ++        A  + 
Sbjct: 198 YSLGCVLYEVLTGEPP----FTGD-------------SPVSVAYQHVREDPIPPSARHEG 240

Query: 120 CVSFVFNLAMECTIESPERRI-NAKEIVTELSKIRD 154
             + +  + ++   ++PE R   A E+  +L ++ +
Sbjct: 241 LSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 276

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.0 bits (163), Expect = 2e-14
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 22/160 (13%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P N+LL+++M   ++DFG AK+L  E +       + T  Y++P E   E     + D++
Sbjct: 136 PENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP-ELLTEKSACKSSDLW 194

Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           + G ++ +      P    F                +   +    +    D       + 
Sbjct: 195 ALGCIIYQLVAGLPP----FRAG-------------NEYLIFQKIIKLEYDFPEKFFPKA 237

Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNV 160
              V     +  +    +R+  +E+           F +V
Sbjct: 238 RDLV----EKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 273

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.7 bits (154), Expect = 2e-13
 Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 11/153 (7%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P+N+LLD+N V  L+DFG+AK       +   T  + T  Y AP             D++
Sbjct: 128 PNNLLLDENGVLKLADFGLAKSF--GSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMW 185

Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           + G +L E   R        S    L R    L + +  +  D   L       +     
Sbjct: 186 AVGCILAELLLRVPFLPGD-SDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIP 244

Query: 121 VSFVF--------NLAMECTIESPERRINAKEI 145
           +  +F        +L     + +P  RI A + 
Sbjct: 245 LHHIFSAAGDDLLDLIQGLFLFNPCARITATQA 277

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.8 bits (154), Expect = 3e-13
 Identities = 29/158 (18%), Positives = 56/158 (35%), Gaps = 13/158 (8%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQT--LATIGYMAPVEYGREGRVSTNGD 58
            +NVL+  + V  L+DFG+A+       S     T  + T+ Y  P     E       D
Sbjct: 145 AANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPID 204

Query: 59  VYSFGIMLMEAFTRKKPTDEM-----------FSGEMTLKRWINDLLSVSVMEVVDANLL 107
           ++  G ++ E +TR                    G +T + W N        ++      
Sbjct: 205 LWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQ 264

Query: 108 TREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEI 145
            R+ +          +  +L  +  +  P +RI++ + 
Sbjct: 265 KRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA 302

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.2 bits (150), Expect = 8e-13
 Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 12/152 (7%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P N+L+  +    L+DFG+A++       M  T  + T+ Y AP E   +   +T  D++
Sbjct: 144 PQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVTLWYRAP-EVLLQSSYATPVDLW 199

Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           S G +  E F RK       S    L + ++ +      +      L R+  H  + Q  
Sbjct: 200 SVGCIFAEMFRRKPLFRGS-SDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPI 258

Query: 121 VSFV-------FNLAMECTIESPERRINAKEI 145
             FV        +L ++C   +P +RI+A   
Sbjct: 259 EKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 290

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.1 bits (147), Expect = 2e-12
 Identities = 29/154 (18%), Positives = 55/154 (35%), Gaps = 11/154 (7%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P N+L++ N    L++FG+A+      +  +    + T+ Y  P         ST+ D++
Sbjct: 129 PQNLLINRNGELKLANFGLARAFGIPVRCYSAE--VVTLWYRPPDVLFGAKLYSTSIDMW 186

Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           S G +  E     +P       +  LKR    L + +  +      L     +       
Sbjct: 187 SAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATT 246

Query: 121 VSFVF---------NLAMECTIESPERRINAKEI 145
                         +L       +P +RI+A+E 
Sbjct: 247 SLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEA 280

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 60.1 bits (145), Expect = 5e-12
 Identities = 29/150 (19%), Positives = 48/150 (32%), Gaps = 25/150 (16%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPV-----EYGREGRVST 55
           P N+LLDD+M   L+DFG +  L   D      +   T  Y+AP                
Sbjct: 138 PENILLDDDMNIKLTDFGFSCQL---DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGK 194

Query: 56  NGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA 115
             D++S G+++        P    F                  M ++   +         
Sbjct: 195 EVDMWSTGVIMYTLLAGSPP----FWHR-------------KQMLMLRMIMSGNYQFGSP 237

Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEI 145
                   V +L     +  P++R  A+E 
Sbjct: 238 EWDDYSDTVKDLVSRFLVVQPQKRYTAEEA 267

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 60.1 bits (145), Expect = 5e-12
 Identities = 24/147 (16%), Positives = 44/147 (29%), Gaps = 23/147 (15%)

Query: 1   PSNVLL--DDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGD 58
           P N++     +    L DFG+   L  +      T T     + AP E      V    D
Sbjct: 152 PENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTA---EFAAP-EVAEGKPVGYYTD 207

Query: 59  VYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQ 118
           ++S G++     +   P    F GE             +  E +        +   +A  
Sbjct: 208 MWSVGVLSYILLSGLSP----FGGE-------------NDDETLRNVKSCDWNMDDSAFS 250

Query: 119 QCVSFVFNLAMECTIESPERRINAKEI 145
                  +   +  +  P  R+   + 
Sbjct: 251 GISEDGKDFIRKLLLADPNTRMTIHQA 277

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 59.5 bits (143), Expect = 9e-12
 Identities = 32/154 (20%), Positives = 56/154 (36%), Gaps = 12/154 (7%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P N+L++      ++DFG+A+           T  + T+ Y AP       + ST  D++
Sbjct: 128 PQNLLINREGELKIADFGLARAF--GIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIW 185

Query: 61  SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
           S G +  E          + S    L R    L + +     +   L + D +F   +  
Sbjct: 186 SVGCIFAEMVNGTPLFPGV-SEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPL 244

Query: 121 VSFVF---------NLAMECTIESPERRINAKEI 145
               F         +L  +     P +RI AK+ 
Sbjct: 245 PWESFLKGLDESGIDLLSKMLKLDPNQRITAKQA 278

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.0 bits (139), Expect = 3e-11
 Identities = 34/153 (22%), Positives = 59/153 (38%), Gaps = 10/153 (6%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P N+L++      L+DFG+A+      ++ T      T+ Y AP         ST  D++
Sbjct: 130 PQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYSTAVDIW 187

Query: 61  SFGIMLMEAFTRKKP------TDEMFSGEMTLKRWINDLL-SVSVMEVVDANLLTREDRH 113
           S G +  E  TR+         D++F    TL      +   V+ M     +      + 
Sbjct: 188 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 247

Query: 114 FAAKQQCVSFVF-NLAMECTIESPERRINAKEI 145
           F+     +     +L  +     P +RI+AK  
Sbjct: 248 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 280

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.5 bits (138), Expect = 4e-11
 Identities = 31/157 (19%), Positives = 59/157 (37%), Gaps = 13/157 (8%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLI-GEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
           PSN+LL+      + DFG+A++     D +   T+ +AT  Y AP         + + D+
Sbjct: 137 PSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDI 196

Query: 60  YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQ 119
           +S G +L E  + +            L   +  L S S  ++     L   +   +   +
Sbjct: 197 WSVGCILAEMLSNRPIFPGK-HYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK 255

Query: 120 CV-----------SFVFNLAMECTIESPERRINAKEI 145
                        S   +L  +    +P +RI  ++ 
Sbjct: 256 NKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 292

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 57.4 bits (138), Expect = 5e-11
 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 6/75 (8%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P N+LLD N    ++DFG AK +     ++       T  Y+AP E       + + D +
Sbjct: 132 PENILLDKNGHIKITDFGFAKYVPDVTYTLCG-----TPDYIAP-EVVSTKPYNKSIDWW 185

Query: 61  SFGIMLMEAFTRKKP 75
           SFGI++ E      P
Sbjct: 186 SFGILIYEMLAGYTP 200

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 57.0 bits (137), Expect = 6e-11
 Identities = 25/144 (17%), Positives = 48/144 (33%), Gaps = 21/144 (14%)

Query: 2   SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
               LD++    +SDFG++K+   ED     +    T GY+AP    ++   S   D +S
Sbjct: 139 LYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKP-YSKAVDCWS 194

Query: 62  FGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
            G++         P    F  E             +  ++ +  L    +          
Sbjct: 195 IGVIAYILLCGYPP----FYDE-------------NDAKLFEQILKAEYEFDSPYWDDIS 237

Query: 122 SFVFNLAMECTIESPERRINAKEI 145
               +       + PE+R   ++ 
Sbjct: 238 DSAKDFIRHLMEKDPEKRFTCEQA 261

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.0 bits (137), Expect = 6e-11
 Identities = 27/149 (18%), Positives = 46/149 (30%), Gaps = 38/149 (25%)

Query: 1   PSNVLLD-DNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
             N+L+D +     L DFG   LL    +    T    T  Y  P           +  V
Sbjct: 138 DENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAV 193

Query: 60  YSFGIMLMEAFTRKKP---TDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAA 116
           +S GI+L +      P    +E+  G++  ++ ++             +L+         
Sbjct: 194 WSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSEC---------QHLIRW------- 237

Query: 117 KQQCVSFVFNLAMECTIESPERRINAKEI 145
                         C    P  R   +EI
Sbjct: 238 --------------CLALRPSDRPTFEEI 252

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.1 bits (137), Expect = 7e-11
 Identities = 24/125 (19%), Positives = 48/125 (38%), Gaps = 8/125 (6%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
             N+LLD +    ++DFG+ K  +  D          T  Y+AP E     + + + D +
Sbjct: 131 LDNILLDKDGHIKIADFGMCKENMLGDAKTNTFC--GTPDYIAP-EILLGQKYNHSVDWW 187

Query: 61  SFGIMLMEAFTRKKP-----TDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA 115
           SFG++L E    + P      +E+F        +    L     +++    +   ++   
Sbjct: 188 SFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLG 247

Query: 116 AKQQC 120
            +   
Sbjct: 248 VRGDI 252

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.7 bits (136), Expect = 9e-11
 Identities = 27/149 (18%), Positives = 54/149 (36%), Gaps = 25/149 (16%)

Query: 1   PSNVLLDDNMVA----HLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTN 56
           P N++L D  V      + DFG+A  +   D          T  ++AP E      +   
Sbjct: 141 PENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAP-EIVNYEPLGLE 196

Query: 57  GDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAA 116
            D++S G++     +   P    F G+   +           +  V A     ED +F+ 
Sbjct: 197 ADMWSIGVITYILLSGASP----FLGDTKQE----------TLANVSAVNYEFEDEYFS- 241

Query: 117 KQQCVSFVFNLAMECTIESPERRINAKEI 145
                +   +      ++ P++R+  ++ 
Sbjct: 242 --NTSALAKDFIRRLLVKDPKKRMTIQDS 268

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 56.6 bits (136), Expect = 9e-11
 Identities = 28/147 (19%), Positives = 51/147 (34%), Gaps = 23/147 (15%)

Query: 1   PSNVLLD--DNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGD 58
           P N++ +        + DFG+A  L   +       T AT  + AP E      V    D
Sbjct: 155 PENIMCETKKASSVKIIDFGLATKL---NPDEIVKVTTATAEFAAP-EIVDREPVGFYTD 210

Query: 59  VYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQ 118
           +++ G++     +   P    F+GE  L+   N         V   +    ED   +   
Sbjct: 211 MWAIGVLGYVLLSGLSP----FAGEDDLETLQN---------VKRCDWEFDEDAFSSVSP 257

Query: 119 QCVSFVFNLAMECTIESPERRINAKEI 145
           +   F+         + P +R+   + 
Sbjct: 258 EAKDFI----KNLLQKEPRKRLTVHDA 280

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.2 bits (135), Expect = 1e-10
 Identities = 24/147 (16%), Positives = 49/147 (33%), Gaps = 23/147 (15%)

Query: 1   PSNVLLD--DNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGD 58
           P N++     +    + +FG A+ L   D             Y AP E  +   VST  D
Sbjct: 130 PENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTA---PEYYAP-EVHQHDVVSTATD 185

Query: 59  VYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQ 118
           ++S G ++    +   P    F  E             +  ++++  +         A +
Sbjct: 186 MWSLGTLVYVLLSGINP----FLAE-------------TNQQIIENIMNAEYTFDEEAFK 228

Query: 119 QCVSFVFNLAMECTIESPERRINAKEI 145
           +      +      ++  + R+ A E 
Sbjct: 229 EISIEAMDFVDRLLVKERKSRMTASEA 255

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 54.5 bits (130), Expect = 5e-10
 Identities = 26/163 (15%), Positives = 53/163 (32%), Gaps = 21/163 (12%)

Query: 1   PSNVLLD-DNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
           P NV++D ++    L D+G+A+              +A+  +  P           + D+
Sbjct: 157 PHNVMIDHEHRKLRLIDWGLAEFY---HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDM 213

Query: 60  YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQ 119
           +S G ML     RK+P          L R    L +  + + +D   +  + R      +
Sbjct: 214 WSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGR 273

Query: 120 CVSFVF-----------------NLAMECTIESPERRINAKEI 145
                +                 +   +      + R+ A+E 
Sbjct: 274 HSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 316

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.3 bits (127), Expect = 1e-09
 Identities = 37/155 (23%), Positives = 60/155 (38%), Gaps = 14/155 (9%)

Query: 1   PSNVLLD-DNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
           P N+LLD D  V  L DFG AK L+  + +++    + +  Y AP         +++ DV
Sbjct: 150 PQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---YICSRYYRAPELIFGATDYTSSIDV 206

Query: 60  YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQ 119
           +S G +L E    +       SG   L   I  L + +  ++ + N    E +    K  
Sbjct: 207 WSAGCVLAELLLGQPIFPGD-SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAH 265

Query: 120 CVSFVF---------NLAMECTIESPERRINAKEI 145
             + VF          L       +P  R+   E 
Sbjct: 266 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEA 300

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 53.3 bits (127), Expect = 1e-09
 Identities = 20/168 (11%), Positives = 42/168 (25%), Gaps = 28/168 (16%)

Query: 1   PSNVLLDDNMVAH-----LSDFGIAKLLIGEDQS-----MTQTQTLATIGYMAPVEYGRE 50
           P N L+      +     + DFG+ K               +     T  YM+       
Sbjct: 129 PDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSI-NTHLG 187

Query: 51  GRVSTNGDVYSFGIMLMEAFTRK--KPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLT 108
              S   D+ + G + M            +  + +   +R      S  + E+       
Sbjct: 188 REQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCA----- 242

Query: 109 REDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
                           +         + +   +   +    SK+ + L
Sbjct: 243 ----------GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL 280

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 52.5 bits (125), Expect = 2e-09
 Identities = 21/162 (12%), Positives = 39/162 (24%), Gaps = 26/162 (16%)

Query: 1   PSNVL---LDDNMVAHLSDFGIAKLLIGED-----QSMTQTQTLATIGYMAPVEYGREGR 52
           P N L        + ++ DFG+AK                     T  Y +         
Sbjct: 131 PDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI-NTHLGIE 189

Query: 53  VSTNGDVYSFGIMLMEAFTRKKPTDEMFSGE--MTLKRWINDLLSVSVMEVVDANLLTRE 110
            S   D+ S G +LM       P   + +       +R     +S  +  +         
Sbjct: 190 QSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCK------- 242

Query: 111 DRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
                      S        C     + + +   +      +
Sbjct: 243 --------GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 276

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.0 bits (124), Expect = 3e-09
 Identities = 27/148 (18%), Positives = 46/148 (31%), Gaps = 20/148 (13%)

Query: 1   PSNVLLD---DNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNG 57
           P N+L      N +  L+DFG AK     +   T   T     Y+AP E     +   + 
Sbjct: 139 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT---PYYVAP-EVLGPEKYDKSC 194

Query: 58  DVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAK 117
           D++S G+++        P    F     L              +     + + +      
Sbjct: 195 DMWSLGVIMYILLCGYPP----FYSNHGLAIS---------PGMKTRIRMGQYEFPNPEW 241

Query: 118 QQCVSFVFNLAMECTIESPERRINAKEI 145
            +    V  L        P +R+   E 
Sbjct: 242 SEVSEEVKMLIRNLLKTEPTQRMTITEF 269

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (121), Expect = 8e-09
 Identities = 17/75 (22%), Positives = 30/75 (40%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
             N+LLD N    L+DFG++K  + ++                 +  G +       D +
Sbjct: 157 LENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWW 216

Query: 61  SFGIMLMEAFTRKKP 75
           S G+++ E  T   P
Sbjct: 217 SLGVLMYELLTGASP 231

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 50.9 bits (121), Expect = 8e-09
 Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 13/118 (11%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P+N+LLD++    +SD G+A              ++ T GYMAP    +     ++ D +
Sbjct: 135 PANILLDEHGHVRISDLGLACDF----SKKKPHASVGTHGYMAPEVLQKGVAYDSSADWF 190

Query: 61  SFGIMLMEAFTRKKPTD--------EMFSGEMTLKRWINDLLSVSVMEVVDANLLTRE 110
           S G ML +      P          E+    +T+   + D  S  +  +++  LL R+
Sbjct: 191 SLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEG-LLQRD 247

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.1 bits (116), Expect = 3e-08
 Identities = 32/155 (20%), Positives = 55/155 (35%), Gaps = 15/155 (9%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P N+ ++++    + DFG+A+           T  + T  Y AP       R +   D++
Sbjct: 149 PGNLAVNEDCELKILDFGLARQA-----DSEMTGYVVTRWYRAPEVILNWMRYTQTVDIW 203

Query: 61  SFGIMLMEAFTRKKP---------TDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTRED 111
           S G ++ E  T K             E+     T        L     +     L   E 
Sbjct: 204 SVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEK 263

Query: 112 RHFAAKQQCVSFVF-NLAMECTIESPERRINAKEI 145
           + FA+     S +  NL  +  +   E+R+ A E 
Sbjct: 264 KDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEA 298

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.6 bits (115), Expect = 6e-08
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 3/75 (4%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
             N++LD +    ++DFG+ K  I +  +M       T  Y+AP     +       D +
Sbjct: 133 LENLMLDKDGHIKITDFGLCKEGISDGATM--KTFCGTPEYLAPEVL-EDNDYGRAVDWW 189

Query: 61  SFGIMLMEAFTRKKP 75
             G+++ E    + P
Sbjct: 190 GLGVVMYEMMCGRLP 204

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.2 bits (111), Expect = 2e-07
 Identities = 27/155 (17%), Positives = 54/155 (34%), Gaps = 15/155 (9%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           PSN+ ++++    + DFG+A+           T  +AT  Y AP         +   D++
Sbjct: 149 PSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 203

Query: 61  SFGIMLMEAFTRKKP---------TDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTRED 111
           S G ++ E  T +              +     T    +   +S         +L     
Sbjct: 204 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 263

Query: 112 RHFAAKQQCVS-FVFNLAMECTIESPERRINAKEI 145
            +FA      +    +L  +  +   ++RI A + 
Sbjct: 264 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQA 298

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.2 bits (106), Expect = 8e-07
 Identities = 20/93 (21%), Positives = 37/93 (39%), Gaps = 12/93 (12%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           P N+L+D      ++DFG AK + G   ++       T   +AP E       +   D +
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVKGRTWTLCG-----TPEALAP-EIILSKGYNKAVDWW 222

Query: 61  SFGIMLMEAFTRKKPTDEMFSGE--MTLKRWIN 91
           + G+++ E      P    F  +  + +   I 
Sbjct: 223 ALGVLIYEMAAGYPP----FFADQPIQIYEKIV 251

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.9 bits (102), Expect = 2e-06
 Identities = 17/76 (22%), Positives = 28/76 (36%), Gaps = 2/76 (2%)

Query: 1   PSNVLLD-DNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
           P NVL++  +   +L    IA L          T ++ T  Y +P E           D+
Sbjct: 154 PENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSP-EVLLGAPWGCGADI 212

Query: 60  YSFGIMLMEAFTRKKP 75
           +S   ++ E  T    
Sbjct: 213 WSTACLIFELITGDFL 228

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (90), Expect = 9e-05
 Identities = 27/166 (16%), Positives = 56/166 (33%), Gaps = 25/166 (15%)

Query: 1   PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
           PSN+++  +    + DFG+A+       S   T  + T  Y AP E         N D++
Sbjct: 147 PSNIVVKSDCTLKILDFGLART---AGTSFMMTPYVVTRYYRAP-EVILGMGYKENVDIW 202

Query: 61  SFGIMLMEAFTRKKP---------------------TDEMFSGEMTLKRWINDLLSVSVM 99
           S G ++ E    K                        + M   + T++ ++ +    + +
Sbjct: 203 SVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGL 262

Query: 100 EVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEI 145
                   +         +   S   +L  +  +  P +RI+  + 
Sbjct: 263 TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 308

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	164
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.97
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.96
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.96
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.96
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.96
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.96
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.96
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.96
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.96
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.96
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.95
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.95
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.95
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.95
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.95
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.95
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.95
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.95
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.95
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.95
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.95
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.95
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.95
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.95
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.95
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.94
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.94
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.94
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.94
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.94
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.94
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.94
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.94
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.94
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.94
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.94
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.94
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.93
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.93
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.93
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.93
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.93
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.93
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.93
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.93
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.93
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.93
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.92
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.92
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.92
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.92
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.92
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.92
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.92
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.92
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.91
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.91
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.91
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.9
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.89
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.89
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.85
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	96.28

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.8e-32  Score=182.80  Aligned_cols=142  Identities=23%  Similarity=0.337  Sum_probs=97.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhc--cCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGR--EGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~--~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+|||++.++.+||+|||+++...............||+.|+|||.+..  ...++.++|||||||++|||++|..||..
T Consensus       132 p~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~  211 (276)
T d1uwha_         132 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN  211 (276)
T ss_dssp             GGGEEEETTSSEEECCCCCSCC------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             HHHEEEcCCCCEEEccccceeeccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCC
Confidence            7899999999999999999987633233333345678999999966643  23478899999999999999999999975


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhh
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLF  157 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~  157 (164)
                      ...... ..            ..+.....  .+.....+..+++.+.+++.+||+.||++|||++++++.|+.+.+.+.
T Consensus       212 ~~~~~~-~~------------~~~~~~~~--~p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~~P  275 (276)
T d1uwha_         212 INNRDQ-II------------FMVGRGYL--SPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLP  275 (276)
T ss_dssp             CCCHHH-HH------------HHHHHTSC--CCCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred             CChHHH-HH------------HHHhcCCC--CCcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHcCC
Confidence            322111 11            11111110  111112234556779999999999999999999999999999887653

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.8e-30  Score=174.50  Aligned_cols=135  Identities=21%  Similarity=0.384  Sum_probs=92.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcC-CCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRK-KPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~-~p~~~~   79 (164)
                      |+||||+.++.+||+|||+++...............||+.|+|||.+ ....++.++|||||||++|+|+++. .||...
T Consensus       162 p~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l-~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~  240 (299)
T d1ywna1         162 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI-FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV  240 (299)
T ss_dssp             GGGEEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             ccceeECCCCcEEEccCcchhhccccccccccCceeeCccccchhHh-hcCCCCcccceeehHHHHHHHHhCCCCCCCCC
Confidence            78999999999999999999876433333334456789999999554 5667889999999999999999864 567543


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDS  155 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~  155 (164)
                      .... .+..            .+.....      ...+..+++.+.+++.+||+.||++|||++++++.|+++.+.
T Consensus       241 ~~~~-~~~~------------~~~~~~~------~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq~  297 (299)
T d1ywna1         241 KIDE-EFCR------------RLKEGTR------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  297 (299)
T ss_dssp             CCSH-HHHH------------HHHHTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CHHH-HHHH------------HHhcCCC------CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence            2221 1111            1111111      112234566789999999999999999999999999988653

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.2e-30  Score=177.98  Aligned_cols=131  Identities=19%  Similarity=0.353  Sum_probs=97.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+|||++.++.+||+|||+|+...............||+.|+|||.+ ....++.++|||||||++|+|++ |..||...
T Consensus       192 p~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l-~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~  270 (325)
T d1rjba_         192 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESL-FEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI  270 (325)
T ss_dssp             GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred             hhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHH-cCCCCCcceeccchhHHHHHHHhCCCCCCCCC
Confidence            78999999999999999999876444433344456689999999544 46668899999999999999997 89999754


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSK  151 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~  151 (164)
                      ..... +.            ..+....      ....+..+++.+.+++.+||+.||++|||+++|++.|..
T Consensus       271 ~~~~~-~~------------~~~~~~~------~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~  323 (325)
T d1rjba_         271 PVDAN-FY------------KLIQNGF------KMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGC  323 (325)
T ss_dssp             CCSHH-HH------------HHHHTTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CHHHH-HH------------HHHhcCC------CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHhC
Confidence            33221 11            1111111      112234456779999999999999999999999998863

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.5e-30  Score=172.10  Aligned_cols=129  Identities=24%  Similarity=0.344  Sum_probs=93.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||+++.+.............||+.|+|||.+......+.++||||+||++|+|++|..||....
T Consensus       131 p~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~  210 (271)
T d1nvra_         131 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS  210 (271)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSS
T ss_pred             HHHEEECCCCCEEEccchhheeeccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCC
Confidence            78999999999999999999876433333334456799999999666544445678999999999999999999997543


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .........            ....      ........+++.+.+++.+||+.||++|||++++++
T Consensus       211 ~~~~~~~~~------------~~~~------~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         211 DSCQEYSDW------------KEKK------TYLNPWKKIDSAPLALLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             TTSHHHHHH------------HTTC------TTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             hHHHHHHHH------------hcCC------CCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            322211111            0000      011112334566889999999999999999999875

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=5.1e-30  Score=173.00  Aligned_cols=139  Identities=24%  Similarity=0.356  Sum_probs=102.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc-cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS-MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~   78 (164)
                      |+|||++.++.+||+|||+++.+...... .......||+.|+|||. .....++.++|||||||++||+++ |..||..
T Consensus       137 p~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~  215 (285)
T d1u59a_         137 ARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPEC-INFRKFSSRSDVWSYGVTMWEALSYGQKPYKK  215 (285)
T ss_dssp             GGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHH-HHHCEECHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             hhheeeccCCceeeccchhhhcccccccccccccccccCccccChHH-HhCCCCCccchhhcchHHHHHHHhCCCCCCCC
Confidence            68999999999999999999886432222 12233467899999954 456678899999999999999997 8999975


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhhc
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFR  158 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~~  158 (164)
                      ....+  ...            .+....      ....+..+++++.+++.+||+.||++|||+.+|++.|+.+...+..
T Consensus       216 ~~~~~--~~~------------~i~~~~------~~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~~~~  275 (285)
T d1u59a_         216 MKGPE--VMA------------FIEQGK------RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS  275 (285)
T ss_dssp             CCTHH--HHH------------HHHTTC------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHT
T ss_pred             CCHHH--HHH------------HHHcCC------CCCCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHhhh
Confidence            42211  111            111111      1122345667799999999999999999999999999998877765


Q ss_pred             cC
Q 039452          159 NV  160 (164)
Q Consensus       159 ~~  160 (164)
                      .+
T Consensus       276 ~~  277 (285)
T d1u59a_         276 KV  277 (285)
T ss_dssp             TC
T ss_pred             cc
Confidence            43

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.96  E-value=5.4e-30  Score=174.05  Aligned_cols=134  Identities=22%  Similarity=0.443  Sum_probs=87.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCcc---ccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSM---TQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPT   76 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~---~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~   76 (164)
                      |+||||+.++.+||+|||+++.+.......   ......+|+.|+|||. .....++.++|||||||++|||++ |..||
T Consensus       156 p~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~-~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf  234 (299)
T d1jpaa_         156 ARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA-IQYRKFTSASDVWSYGIVMWEVMSYGERPY  234 (299)
T ss_dssp             GGGEEECTTCCEEECCC-----------------------CGGGSCHHH-HHSCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             cceEEECCCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHH-HhcCCCCcccccccchHHHHHHHhCCCCCC
Confidence            689999999999999999998763222211   1122457889999954 456678889999999999999998 89998


Q ss_pred             CccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHH
Q 039452           77 DEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDS  155 (164)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~  155 (164)
                      .......  ..            ..+....      ....+..++..+.+++.+||+.||++|||+.+|++.|+++.+.
T Consensus       235 ~~~~~~~--~~------------~~i~~~~------~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~~  293 (299)
T d1jpaa_         235 WDMTNQD--VI------------NAIEQDY------RLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRN  293 (299)
T ss_dssp             TTCCHHH--HH------------HHHHTTC------CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             CCCCHHH--HH------------HHHHcCC------CCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcC
Confidence            7532111  11            1111111      1112334566789999999999999999999999999988753

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=8.5e-30  Score=170.33  Aligned_cols=133  Identities=24%  Similarity=0.443  Sum_probs=85.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhc-CCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTR-KKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g-~~p~~~~   79 (164)
                      |+|||++.++.+||+|||+++.+.... ........||..|+|||. .....++.++|||||||++||++++ .+|+...
T Consensus       129 p~Nill~~~~~~Kl~DFGla~~~~~~~-~~~~~~~~gt~~y~aPE~-l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~  206 (263)
T d1sm2a_         129 ARNCLVGENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEV-FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR  206 (263)
T ss_dssp             GGGEEECGGGCEEECSCC-------------------CTTSCCHHH-HTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSC
T ss_pred             hhheeecCCCCeEecccchheeccCCC-ceeecceecCcccCChHH-hcCCCCCchhhhcchHHHHHHHHHCCCCCCCCC
Confidence            689999999999999999998763222 122234568899999954 4566688999999999999999985 5555421


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDS  155 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~  155 (164)
                       . ......            .+.....      ...+..+++.+.+++.+||+.||++|||++++++.|++|.++
T Consensus       207 -~-~~~~~~------------~i~~~~~------~~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~es  262 (263)
T d1sm2a_         207 -S-NSEVVE------------DISTGFR------LYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES  262 (263)
T ss_dssp             -C-HHHHHH------------HHHHTCC------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -C-HHHHHH------------HHHhcCC------CCCccccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhC
Confidence             1 111111            1111110      111234456689999999999999999999999999998763

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.5e-29  Score=169.82  Aligned_cols=134  Identities=22%  Similarity=0.376  Sum_probs=95.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||||+.++.+||+|||+++.+.. ..........+++.|+|||. .....++.++|||||||++|+|++|..|+....
T Consensus       137 p~NIll~~~~~~Kl~DFGla~~~~~-~~~~~~~~~~gt~~y~APE~-~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~  214 (272)
T d1qpca_         137 AANILVSDTLSCKIADFGLARLIED-NEYTAREGAKFPIKWTAPEA-INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM  214 (272)
T ss_dssp             GGGEEECTTSCEEECCCTTCEECSS-SCEECCTTCCCCTTTSCHHH-HHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred             hhheeeecccceeeccccceEEccC-CccccccccCCcccccChHH-HhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999987632 22222334568899999954 456678899999999999999999665543221


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDS  155 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~  155 (164)
                      . ......            .+....      ....+..+++.+.+++.+||+.||++|||+++|++.|+.+..+
T Consensus       215 ~-~~~~~~------------~i~~~~------~~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~fts  270 (272)
T d1qpca_         215 T-NPEVIQ------------NLERGY------RMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA  270 (272)
T ss_dssp             C-HHHHHH------------HHHTTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             C-HHHHHH------------HHHhcC------CCCCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhhc
Confidence            1 111111            111111      1112334566799999999999999999999999999987643

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.3e-29  Score=171.03  Aligned_cols=135  Identities=24%  Similarity=0.434  Sum_probs=89.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc-cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS-MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+||||+.++.+||+|||+++.+...... .......||..|+||| +.....++.++|||||||++|||+++..|+...
T Consensus       138 p~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE-~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~  216 (283)
T d1mqba_         138 ARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPE-AISYRKFTSASDVWSFGIVMWEVMTYGERPYWE  216 (283)
T ss_dssp             GGGEEECTTCCEEECCCCC-----------------CCCGGGSCHH-HHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             cceEEECCCCeEEEcccchhhcccCCCccceEeccCCCCccccCHH-HHccCCCCCcccccccHHHHHHHHhCCCCcccc
Confidence            78999999999999999999876332221 1223345789999995 445667888999999999999999976665432


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDS  155 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~  155 (164)
                      .... ...            ..+.....      ...+..++..+.+++.+||+.||++|||+.+|++.|+.+.+.
T Consensus       217 ~~~~-~~~------------~~i~~~~~------~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~  273 (283)
T d1mqba_         217 LSNH-EVM------------KAINDGFR------LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA  273 (283)
T ss_dssp             CCHH-HHH------------HHHHTTCC------CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             CCHH-HHH------------HHHhccCC------CCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhC
Confidence            1111 111            11111111      112234556689999999999999999999999999988753

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.96  E-value=3.6e-30  Score=175.20  Aligned_cols=132  Identities=25%  Similarity=0.383  Sum_probs=94.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcC-CCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRK-KPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~-~p~~~~   79 (164)
                      |+|||++.++.+||+|||+++.+.........+...+++.|+||| +.....++.++|||||||++|||++|. .||...
T Consensus       168 p~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE-~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~  246 (301)
T d1lufa_         168 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPE-SIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM  246 (301)
T ss_dssp             GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHH-HHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred             ccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHH-HHccCCCChhhhhccchhhHHHHHccCCCCCCCC
Confidence            689999999999999999998764333333444566888999995 445667889999999999999999986 566542


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIR  153 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~  153 (164)
                      ...+  ..            ..+.....      ...+..+++.+.+++..||+.||++|||+.+|++.|++|.
T Consensus       247 ~~~e--~~------------~~v~~~~~------~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~  300 (301)
T d1lufa_         247 AHEE--VI------------YYVRDGNI------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC  300 (301)
T ss_dssp             CHHH--HH------------HHHHTTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             CHHH--HH------------HHHHcCCC------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            1111  11            11111111      1123455667999999999999999999999999998874

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.2e-29  Score=170.65  Aligned_cols=135  Identities=25%  Similarity=0.367  Sum_probs=96.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc-cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS-MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~   78 (164)
                      |+|||++.++.+||+|||+++.+...... .......||+.|+|||. .....++.++|||||||++||+++ |..||..
T Consensus       135 p~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~-l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~  213 (277)
T d1xbba_         135 ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC-INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG  213 (277)
T ss_dssp             GGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHH-HHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred             chhhcccccCcccccchhhhhhccccccccccccccCCCceecCchh-hcCCCCCchhhhccchhhhhHHhhCCCCCCCC
Confidence            78999999999999999999876332222 12233568899999954 456678899999999999999997 8999975


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHh
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL  156 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~  156 (164)
                      .....  ..            ..+....      ....+..++..+.+++.+||+.||++|||+++|++.|+....+.
T Consensus       214 ~~~~~--~~------------~~i~~~~------~~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~  271 (277)
T d1xbba_         214 MKGSE--VT------------AMLEKGE------RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV  271 (277)
T ss_dssp             CCHHH--HH------------HHHHTTC------CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred             CCHHH--HH------------HHHHcCC------CCCCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHhhc
Confidence            32111  11            1111111      11123456677999999999999999999999999888876543

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.7e-29  Score=169.74  Aligned_cols=134  Identities=22%  Similarity=0.388  Sum_probs=88.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||+++.+... .........+|+.|+|||. .....++.++|||||||++|+|++ |..||...
T Consensus       136 p~NIll~~~~~~Kl~DfG~a~~~~~~-~~~~~~~~~gt~~y~apE~-l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~  213 (273)
T d1mp8a_         136 ARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPES-INFRRFTSASDVWMFGVCMWEILMHGVKPFQGV  213 (273)
T ss_dssp             GGGEEEEETTEEEECC--------------------CCGGGCCHHH-HHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             hhheeecCCCcEEEccchhheeccCC-cceeccceecCcccchhhH-hccCCCCCccccccchHHHHHHHhcCCCCCCCC
Confidence            78999999999999999999875322 1222334567899999954 456668889999999999999997 88888754


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHh
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL  156 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~  156 (164)
                      .....  ..            .+....      ..+.+..+++.+.+++.+||+.||++|||+++|++.|.++.++.
T Consensus       214 ~~~~~--~~------------~i~~~~------~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~~  270 (273)
T d1mp8a_         214 KNNDV--IG------------RIENGE------RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE  270 (273)
T ss_dssp             CGGGH--HH------------HHHTTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             CHHHH--HH------------HHHcCC------CCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence            32221  11            111110      11123456677999999999999999999999999999987764

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.2e-29  Score=170.55  Aligned_cols=157  Identities=17%  Similarity=0.176  Sum_probs=98.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc--cccccccccccccCchhhhccC-----cccCccchHhHHHHHHHHHhcC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS--MTQTQTLATIGYMAPVEYGREG-----RVSTNGDVYSFGIMLMEAFTRK   73 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~-----~~~~~~Di~s~g~~~~~~~~g~   73 (164)
                      |+||||+.++.+||+|||+++........  .......||+.|+|||.+....     .++.++|||||||++||+++|.
T Consensus       136 p~NILl~~~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~  215 (303)
T d1vjya_         136 SKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRC  215 (303)
T ss_dssp             GGGEEECTTSCEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTB
T ss_pred             ccceEEcCCCCeEEEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCC
Confidence            78999999999999999999876433322  1233467999999996553221     2567899999999999999998


Q ss_pred             CCCCccccCchhHHHHHHHhh-hhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHH
Q 039452           74 KPTDEMFSGEMTLKRWINDLL-SVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI  152 (164)
Q Consensus        74 ~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~  152 (164)
                      .|+.................. .......+.....................+.+++.+||+.||++|||+.+|++.|+++
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i  295 (303)
T d1vjya_         216 SIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL  295 (303)
T ss_dssp             CBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCcccccccchhhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHH
Confidence            877532221111100000000 0001111111111111111222234556688999999999999999999999999999


Q ss_pred             HHHhh
Q 039452          153 RDSLF  157 (164)
Q Consensus       153 ~~~~~  157 (164)
                      .++-.
T Consensus       296 ~~~~~  300 (303)
T d1vjya_         296 SQQEG  300 (303)
T ss_dssp             HHHHC
T ss_pred             HHhcC
Confidence            87643

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.7e-29  Score=172.92  Aligned_cols=135  Identities=24%  Similarity=0.398  Sum_probs=96.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+|||++.++.+||+|||+++.+.............||+.|+|||.+ ....++.++|||||||++|||++ |..||...
T Consensus       139 p~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l-~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~  217 (317)
T d1xkka_         139 ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI-LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI  217 (317)
T ss_dssp             GGGEEEEETTEEEECCCSHHHHTTTTCC--------CCTTTSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTS
T ss_pred             hhcceeCCCCCeEeeccccceecccccccccccccccCccccChHHH-hcCCCChhhhhhhHHHHHHHHHHCCCCCCCCC
Confidence            78999999999999999999876433333333445689999999555 45568899999999999999998 78888653


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHh
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL  156 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~  156 (164)
                      ....  ..            ..+.....      ...+..+++.+.+++.+||+.||.+|||+.++++.|..+.+..
T Consensus       218 ~~~~--~~------------~~i~~~~~------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~~~  274 (317)
T d1xkka_         218 PASE--IS------------SILEKGER------LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP  274 (317)
T ss_dssp             CGGG--HH------------HHHHHTCC------CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSH
T ss_pred             CHHH--HH------------HHHHcCCC------CCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHHhCh
Confidence            2222  11            11111111      1123445667899999999999999999999999998886543

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=4e-29  Score=169.08  Aligned_cols=126  Identities=19%  Similarity=0.271  Sum_probs=92.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.+|.+||+|||+++.+..  .........||+.|+|||.+ ....++.++||||+||++|+|++|..||....
T Consensus       144 p~NILl~~~~~vkl~DFG~a~~~~~--~~~~~~~~~gt~~Y~aPE~~-~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~  220 (293)
T d1yhwa1         144 SDNILLGMDGSVKLTDFGFCAQITP--EQSKRSTMVGTPYWMAPEVV-TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN  220 (293)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECCS--TTCCBCCCCSCGGGCCHHHH-SSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred             HHHeEECCCCcEeeccchhheeecc--ccccccccccCCCccChhhh-cCCCCCchhceehHhHHHHHHhhCCCCCCCCC
Confidence            7899999999999999999987632  22233456799999999555 45668899999999999999999999996432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ....             ........     ......+..++..+.+++.+||+.||++|||++++++
T Consensus       221 ~~~~-------------~~~~~~~~-----~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  269 (293)
T d1yhwa1         221 PLRA-------------LYLIATNG-----TPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (293)
T ss_dssp             HHHH-------------HHHHHHHC-----SCCCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HHHH-------------HHHHHhCC-----CCCCCCcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            1110             00111111     1111223456677999999999999999999999875

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.1e-29  Score=171.60  Aligned_cols=139  Identities=18%  Similarity=0.293  Sum_probs=94.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||+++.+.............||+.|+|||. ..+..++.++||||+||++|+|++|..||....
T Consensus       136 p~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~-~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~  214 (288)
T d1uu3a_         136 PENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL-LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN  214 (288)
T ss_dssp             GGGEEECTTSCEEECCCTTCEECC----------CCCCGGGCCHHH-HHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             ccccccCCCceEEecccccceecccCCcccccccccCCccccCcee-eccCCCCcccceehhhHHHHHHhhCCCCCCCcC
Confidence            7899999999999999999987643333333445679999999954 456668889999999999999999999997421


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhhccC
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNV  160 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~~~~  160 (164)
                        .....           ..+....    .    ..+..+++.+.+++.+||+.||++|||+++++....-..+..+.++
T Consensus       215 --~~~~~-----------~~i~~~~----~----~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i  273 (288)
T d1uu3a_         215 --EYLIF-----------QKIIKLE----Y----DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV  273 (288)
T ss_dssp             --HHHHH-----------HHHHTTC----C----CCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred             --HHHHH-----------HHHHcCC----C----CCCccCCHHHHHHHHHHccCCHhHCcCHHHHcCCHHHHcCCccCCC
Confidence              11110           0111110    0    1123456668999999999999999999997664433334455444


Q ss_pred             C
Q 039452          161 G  161 (164)
Q Consensus       161 ~  161 (164)
                      +
T Consensus       274 ~  274 (288)
T d1uu3a_         274 T  274 (288)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=8.7e-30  Score=170.64  Aligned_cols=124  Identities=20%  Similarity=0.266  Sum_probs=86.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||+++.+..  .........||+.|+|||. .....++.++||||+||++|+|++|..||....
T Consensus       142 p~NIll~~~~~vkl~DFG~a~~~~~--~~~~~~~~~gt~~Y~APE~-l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~  218 (269)
T d2java1         142 PANVFLDGKQNVKLGDFGLARILNH--DTSFAKAFVGTPYYMSPEQ-MNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS  218 (269)
T ss_dssp             GGGEEECTTSCEEECCHHHHHHC-------------CCCSCCCHHH-HTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             hhhcCcCCCCcEEEeeccceeeccc--CCCccccCCCCcccCCHHH-HcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCC
Confidence            7899999999999999999987632  2222345678999999954 456668899999999999999999999997432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .  ....            ..+......      ..+..+++++.+++.+||+.||.+|||++++++
T Consensus       219 ~--~~~~------------~~i~~~~~~------~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         219 Q--KELA------------GKIREGKFR------RIPYRYSDELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             H--HHHH------------HHHHHTCCC------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             H--HHHH------------HHHHcCCCC------CCCcccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            1  1111            011111111      112345567899999999999999999999875

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=4.5e-29  Score=166.61  Aligned_cols=121  Identities=19%  Similarity=0.241  Sum_probs=89.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||++.....    .......||+.|+|||.+ .+..++.++||||+||++|+|++|..||....
T Consensus       134 p~Nill~~~~~~kl~DFG~a~~~~~----~~~~~~~Gt~~Y~APE~~-~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~  208 (263)
T d2j4za1         134 PENLLLGSAGELKIADFGWSVHAPS----SRRTTLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT  208 (263)
T ss_dssp             GGGEEECTTSCEEECCCCSCSCCCC----CCCEETTEEGGGCCHHHH-TTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred             cccceecCCCCEeecccceeeecCC----CcccccCCCCcccCHHHH-cCCCCCchhhhhhHhHHHHHHhcCCCCCCCCC
Confidence            7899999999999999999976522    122345799999999554 45668899999999999999999999996432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ...  ..   .        .+.+ ..       ...+..+++.+.+++.+||+.||++|||++++++
T Consensus       209 ~~~--~~---~--------~i~~-~~-------~~~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         209 YQE--TY---K--------RISR-VE-------FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             HHH--HH---H--------HHHT-TC-------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHH--HH---H--------HHHc-CC-------CCCCccCCHHHHHHHHHHccCCHhHCcCHHHHHc
Confidence            111  10   0        0111 00       0112345667899999999999999999999986

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.8e-29  Score=169.57  Aligned_cols=127  Identities=19%  Similarity=0.282  Sum_probs=91.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhh----ccCcccCccchHhHHHHHHHHHhcCCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYG----REGRVSTNGDVYSFGIMLMEAFTRKKPT   76 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~----~~~~~~~~~Di~s~g~~~~~~~~g~~p~   76 (164)
                      |+|||++.++.+||+|||+++....  .........||+.|+|||.+.    ....++.++||||+||++|+|++|..||
T Consensus       138 p~NIll~~~~~~Kl~DFG~a~~~~~--~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf  215 (288)
T d2jfla1         138 AGNILFTLDGDIKLADFGVSAKNTR--TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH  215 (288)
T ss_dssp             GGGEEECTTSCEEECCCTTCEECHH--HHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             hhheeECCCCCEEEEechhhhccCC--CcccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCC
Confidence            7899999999999999999976521  111233467999999996653    2344788999999999999999999999


Q ss_pred             CccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           77 DEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .........             ..+...     .......+..+++++.+++.+||+.||++|||++++++
T Consensus       216 ~~~~~~~~~-------------~~i~~~-----~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~  268 (288)
T d2jfla1         216 HELNPMRVL-------------LKIAKS-----EPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ  268 (288)
T ss_dssp             TTSCGGGHH-------------HHHHHS-----CCCCCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CCCCHHHHH-------------HHHHcC-----CCCCCCccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            754322211             011111     11112223456677999999999999999999999976

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.95  E-value=4.1e-29  Score=168.81  Aligned_cols=133  Identities=21%  Similarity=0.377  Sum_probs=94.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||+++..... .........++..|+|||.+ ....++.++|||||||++|+|++|..|+....
T Consensus       143 p~NILl~~~~~~Kl~DFG~a~~~~~~-~~~~~~~~~g~~~y~aPE~~-~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~  220 (287)
T d1opja_         143 ARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESL-AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI  220 (287)
T ss_dssp             GGGEEECGGGCEEECCCCCTTTCCSS-SSEEETTEEECGGGCCHHHH-HHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             cCeEEECCCCcEEEccccceeecCCC-CceeeccccccccccChHHH-cCCCCCchhhhhhHHHHHHHHHhCCCCCCCcc
Confidence            78999999999999999999875322 22223344578899999554 45668899999999999999999776654321


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRD  154 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~  154 (164)
                      . ....            ...+....      ....+..+++.+.+++.+||+.||++|||+++|++.|+.+.+
T Consensus       221 ~-~~~~------------~~~i~~~~------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~  275 (287)
T d1opja_         221 D-LSQV------------YELLEKDY------RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ  275 (287)
T ss_dssp             C-HHHH------------HHHHHTTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTS
T ss_pred             h-HHHH------------HHHHhcCC------CCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            1 1111            11111111      111233456679999999999999999999999999887643

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=6.9e-29  Score=165.32  Aligned_cols=129  Identities=19%  Similarity=0.397  Sum_probs=94.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+||+++.++.+||+|||+++.+... .........++..|+||| +.....++.++|||||||++|+|++ |..||...
T Consensus       128 ~~Nill~~~~~~kl~DfG~a~~~~~~-~~~~~~~~~~t~~y~aPE-~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~  205 (258)
T d1k2pa_         128 ARNCLVNDQGVVKVSDFGLSRYVLDD-EYTSSVGSKFPVRWSPPE-VLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF  205 (258)
T ss_dssp             GGGEEECTTCCEEECCCSSCCBCSSS-SCCCCCCSCCCGGGCCHH-HHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTS
T ss_pred             ceeEEEcCCCcEEECcchhheeccCC-CceeecccCCCCCcCCcH-HhcCCCCCcceeecccchhhHhHHhcCCCCCCCC
Confidence            68999999999999999999875322 222333456889999995 4455668899999999999999998 79998754


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSK  151 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~  151 (164)
                      ...+  ..            ..+....      ....+..+++.+.+++.+||+.||++|||++++++.|.+
T Consensus       206 ~~~~--~~------------~~i~~~~------~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         206 TNSE--TA------------EHIAQGL------RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILD  257 (258)
T ss_dssp             CHHH--HH------------HHHHTTC------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred             CHHH--HH------------HHHHhCC------CCCCcccccHHHHHHHHHHccCCHhHCcCHHHHHHHhhC
Confidence            3211  11            1111111      111223455678999999999999999999999998864

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.9e-28  Score=166.45  Aligned_cols=133  Identities=24%  Similarity=0.403  Sum_probs=98.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+|||++.++.+||+|||+++...............+++.|+|||.+ ....++.++||||||+++|+|++ |..||...
T Consensus       163 p~NiLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l-~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~  241 (299)
T d1fgka_         163 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL-FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV  241 (299)
T ss_dssp             GGGEEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             ccceeecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHh-cCCCCCchhhhHHhHHHHHHhccCCCCCCCCC
Confidence            78999999999999999999876443333334456688999999554 45678999999999999999998 68887642


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRD  154 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~  154 (164)
                      ...  ...            ..+.....      ...+..+++.+.+++.+||+.||++|||+.+|++.|+++.+
T Consensus       242 ~~~--~~~------------~~i~~~~~------~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a  296 (299)
T d1fgka_         242 PVE--ELF------------KLLKEGHR------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA  296 (299)
T ss_dssp             CHH--HHH------------HHHHTTCC------CCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CHH--HHH------------HHHHcCCC------CCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhh
Confidence            211  111            11111111      11223455668999999999999999999999999998865

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=6.2e-28  Score=161.61  Aligned_cols=123  Identities=20%  Similarity=0.332  Sum_probs=87.7

Q ss_pred             CcceEec-CCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLD-DNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~-~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+|||++ .++.+||+|||+++....    .......||+.|+|||.+.  ..++.++||||+||++|+|++|..||...
T Consensus       142 p~NILl~~~~~~~Kl~DFGla~~~~~----~~~~~~~GT~~Y~aPE~~~--~~~~~~~DIwSlGvilyel~~g~~Pf~~~  215 (270)
T d1t4ha_         142 CDNIFITGPTGSVKIGDLGLATLKRA----SFAKAVIGTPEFMAPEMYE--EKYDESVDVYAFGMCMLEMATSEYPYSEC  215 (270)
T ss_dssp             GGGEEESSTTSCEEECCTTGGGGCCT----TSBEESCSSCCCCCGGGGG--TCCCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             hhhceeeCCCCCEEEeecCcceeccC----CccCCcccCccccCHHHhC--CCCCCcCchhhHHHHHHHHHHCCCCCCCc
Confidence            7899996 578999999999976421    1223457999999996553  35889999999999999999999999643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ..... ..            ..+...     ..+...+..+++++.+++.+||+.||++|||++++++
T Consensus       216 ~~~~~-~~------------~~i~~~-----~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         216 QNAAQ-IY------------RRVTSG-----VKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             SSHHH-HH------------HHHTTT-----CCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ccHHH-HH------------HHHHcC-----CCCcccCccCCHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence            22111 10            001000     1111122334556899999999999999999999976

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.6e-28  Score=165.81  Aligned_cols=138  Identities=21%  Similarity=0.371  Sum_probs=97.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc--cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS--MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+|||++.++.+||+|||+++.+......  .......||..|+|||.+ ....++.++||||||+++||+++|..||..
T Consensus       158 ~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~ksDI~SfGivl~El~t~~~p~~~  236 (311)
T d1r0pa_         158 ARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAPPYP  236 (311)
T ss_dssp             GGGEEECTTCCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCSCC
T ss_pred             HHhEeECCCCCEEEecccchhhccccccccceecccccccccccChHHH-hcCCCCChhHhhhhHHHHHHHHHCCCCCCC
Confidence            68999999999999999999876322221  122335688999999544 456688999999999999999998887754


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhhc
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFR  158 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~~  158 (164)
                      ...... ...            .+....      ....+..+++.+.+++.+||+.||++|||+.+|++.|+.+.+.+..
T Consensus       237 ~~~~~~-~~~------------~i~~g~------~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~~~~  297 (311)
T d1r0pa_         237 DVNTFD-ITV------------YLLQGR------RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG  297 (311)
T ss_dssp             -------CHH------------HHHTTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCS
T ss_pred             CCCHHH-HHH------------HHHcCC------CCCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHhhhh
Confidence            222111 111            111111      1112234566799999999999999999999999999999876543

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=7.5e-29  Score=169.12  Aligned_cols=138  Identities=22%  Similarity=0.431  Sum_probs=99.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcC-CCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRK-KPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~-~p~~~~   79 (164)
                      |+|||++.++.+||+|||+++.+.............+++.|++||.+ ....++.++|+||||+++|+|++|. .||...
T Consensus       161 ~~NiLld~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l-~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~  239 (308)
T d1p4oa_         161 ARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL-KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL  239 (308)
T ss_dssp             GGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS
T ss_pred             CCceeecCCceEEEeecccceeccCCcceeeccceecccccCCHHHH-ccCCCCcccccccHHHHHHHHHhCCCCCCCCC
Confidence            68999999999999999999876433333334445789999999554 4566788999999999999999985 666532


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhhcc
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRN  159 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~~~  159 (164)
                      ....  .           ...+.+..       ....+..+++.+.+++.+||+.||++|||+++|++.|++..+..++.
T Consensus       240 ~~~~--~-----------~~~i~~~~-------~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~~~~~  299 (308)
T d1p4oa_         240 SNEQ--V-----------LRFVMEGG-------LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE  299 (308)
T ss_dssp             CHHH--H-----------HHHHHTTC-------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHH
T ss_pred             CHHH--H-----------HHHHHhCC-------CCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCcC
Confidence            1111  0           01111111       11122345567999999999999999999999999998876655543

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1e-28  Score=165.77  Aligned_cols=132  Identities=20%  Similarity=0.378  Sum_probs=92.6

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCcc-ccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSM-TQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~   78 (164)
                      |+||+++.++.+||+|||+++.+....... ......++..|+|||.+ ....++.++||||||+++|||++ |..||..
T Consensus       139 p~NIll~~~~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~  217 (273)
T d1u46a_         139 ARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL-KTRTFSHASDTWMFGVTLWEMFTYGQEPWIG  217 (273)
T ss_dssp             GGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHH-HHCEEEHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             HHHhccccccceeeccchhhhhcccCCCcceecCccccCcccCCHHHH-hCCCCCcchhhhhhHHHHHHHHhCCCCCCCC
Confidence            689999999999999999998864322222 22334577899999544 45678899999999999999997 8999974


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI  152 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~  152 (164)
                      .....  ..           ..+....      .....+..++..+.+++.+||+.||++|||+.+|++.|.+.
T Consensus       218 ~~~~~--~~-----------~~i~~~~------~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         218 LNGSQ--IL-----------HKIDKEG------ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             CCHHH--HH-----------HHHHTSC------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cCHHH--HH-----------HHHHhCC------CCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            32111  11           1111111      11112334566799999999999999999999999988765

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=6.7e-28  Score=163.84  Aligned_cols=143  Identities=22%  Similarity=0.170  Sum_probs=93.7

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||.++.+..  .........||+.|+|||.+.....++.++||||+||++|+|++|..||....
T Consensus       128 p~NIli~~~~~~KL~DFG~a~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~  205 (299)
T d1ua2a_         128 PNNLLLDENGVLKLADFGLAKSFGS--PNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDS  205 (299)
T ss_dssp             GGGEEECTTCCEEECCCGGGSTTTS--CCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             cceEEecCCCccccccCccccccCC--CcccccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCC
Confidence            7899999999999999999976522  22223345789999999777666678899999999999999999999997432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhh-------ccc--ccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDAN-------LLT--REDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~--~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ..+  ....+.........+.....       ...  ............++.+.+|+.+||+.||++|||++++++
T Consensus       206 ~~~--~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~  279 (299)
T d1ua2a_         206 DLD--QLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK  279 (299)
T ss_dssp             HHH--HHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             HHH--HHHHHHHhcCCCChhhccchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhC
Confidence            211  11111111100000000000       000  000011112244667999999999999999999999986

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.94  E-value=6.3e-28  Score=164.28  Aligned_cols=126  Identities=17%  Similarity=0.238  Sum_probs=80.1

Q ss_pred             CcceEec---CCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCC
Q 039452            1 PSNVLLD---DNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         1 p~Nill~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      |+|||+.   .++.+||+|||+++....   ........||+.|+|||.+ ....++.++||||+||++|+|++|..||.
T Consensus       135 p~Nil~~~~~~~~~vkl~DFG~a~~~~~---~~~~~~~~GT~~y~APE~~-~~~~~~~~~DiwSlGvilyell~g~~Pf~  210 (307)
T d1a06a_         135 PENLLYYSLDEDSKIMISDFGLSKMEDP---GSVLSTACGTPGYVAPEVL-AQKPYSKAVDCWSIGVIAYILLCGYPPFY  210 (307)
T ss_dssp             GGGEEESSSSTTCCEEECCC---------------------CTTSCHHHH-TTCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             ccceeecccCCCceEEEeccceeEEccC---CCeeeeeeeCccccCcHHH-cCCCCCcHHHhhhhhHHHHHHHhCCCCCC
Confidence            7899995   478999999999986521   1223345799999999554 45668899999999999999999999997


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ......  ..           ..+..    .........+..+++.+.+++.+||+.||++|||++++++
T Consensus       211 ~~~~~~--~~-----------~~i~~----~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  263 (307)
T d1a06a_         211 DENDAK--LF-----------EQILK----AEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ  263 (307)
T ss_dssp             CSSHHH--HH-----------HHHHT----TCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CCCHHH--HH-----------HHHhc----cCCCCCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence            432111  10           01111    1111112223455677999999999999999999999987

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=9.2e-28  Score=160.12  Aligned_cols=128  Identities=27%  Similarity=0.436  Sum_probs=88.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHh-cCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFT-RKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~-g~~p~~~~   79 (164)
                      |+|||++.++.+|++|||+++....     ......++..|+|||.+ ....++.++|||||||++|||++ |..||...
T Consensus       131 p~Nil~~~~~~~kl~dfg~s~~~~~-----~~~~~~~~~~y~aPE~l-~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~  204 (262)
T d1byga_         131 ARNVLVSEDNVAKVSDFGLTKEASS-----TQDTGKLPVKWTAPEAL-REKKFSTKSDVWSFGILLWEIYSFGRVPYPRI  204 (262)
T ss_dssp             GGGEEECTTSCEEECCCCC-----------------CCTTTSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS
T ss_pred             hHhheecCCCCEeecccccceecCC-----CCccccccccCCChHHH-hCCCCChHHHHHhHHHHHHHHHHCCCCCCCCC
Confidence            6899999999999999999986521     12234578899999555 45668899999999999999998 67777643


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRD  154 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~  154 (164)
                      ....  ..            ..+...      .....+..+++.+.+++.+||+.||.+|||++++++.|+++..
T Consensus       205 ~~~~--~~------------~~i~~~------~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~~  259 (262)
T d1byga_         205 PLKD--VV------------PRVEKG------YKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT  259 (262)
T ss_dssp             CGGG--HH------------HHHTTT------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CHHH--HH------------HHHHcC------CCCCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHh
Confidence            2221  11            111111      1111233455678999999999999999999999999998865

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.94  E-value=4e-28  Score=165.34  Aligned_cols=122  Identities=23%  Similarity=0.326  Sum_probs=88.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhc--cCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGR--EGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~--~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+|||++.++.+||+|||++.....      .....||+.|+|||.+..  ...++.++||||+||++|+|++|..||..
T Consensus       143 p~NILl~~~~~~Kl~DFG~a~~~~~------~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~  216 (309)
T d1u5ra_         143 AGNILLSEPGLVKLGDFGSASIMAP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN  216 (309)
T ss_dssp             GGGEEEETTTEEEECCCTTCBSSSS------BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             cceEEECCCCCEEEeecccccccCC------CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCC
Confidence            7899999999999999999976421      234579999999976643  34578899999999999999999999964


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ......             ...+......      ...+..+++.+.+++.+||+.||.+|||++++++
T Consensus       217 ~~~~~~-------------~~~i~~~~~~------~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  266 (309)
T d1u5ra_         217 MNAMSA-------------LYHIAQNESP------ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK  266 (309)
T ss_dssp             SCHHHH-------------HHHHHHSCCC------CCSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CCHHHH-------------HHHHHhCCCC------CCCCCCCCHHHHHHHHHHCcCChhHCcCHHHHHh
Confidence            321110             0111111110      0111234566899999999999999999999975

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.1e-27  Score=162.11  Aligned_cols=135  Identities=20%  Similarity=0.361  Sum_probs=97.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhc-CCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTR-KKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g-~~p~~~~   79 (164)
                      |+||+++.++.+|++|||.++...............+++.|+|||.+ ....++.++|||||||++|+|+++ .+||...
T Consensus       173 p~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~  251 (311)
T d1t46a_         173 ARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI-FNCVYTFESDVWSYGIFLWELFSLGSSPYPGM  251 (311)
T ss_dssp             GGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred             cccccccccCcccccccchheeccCCCcceEeeecccChHHcCHHHh-cCCCCCCcccccchHHHHHHHHhCCCCCCCCC
Confidence            68999999999999999999876544444444556789999999544 566688999999999999999985 5555432


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDS  155 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~  155 (164)
                       .....+.            .++.......      .+..++..+.+++.+||+.||++|||++++++.|+++..+
T Consensus       252 -~~~~~~~------------~~i~~~~~~~------~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~~  308 (311)
T d1t46a_         252 -PVDSKFY------------KMIKEGFRML------SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE  308 (311)
T ss_dssp             -CSSHHHH------------HHHHHTCCCC------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -CHHHHHH------------HHHhcCCCCC------CcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhcc
Confidence             2221111            1222211111      1223456689999999999999999999999999877654

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=4.9e-28  Score=165.96  Aligned_cols=139  Identities=22%  Similarity=0.323  Sum_probs=89.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.+|.+||+|||+|+.+...    .....+||+.|+|||.+ .+..++.++||||+||++|+|++|+.||....
T Consensus       133 P~NILl~~~~~vkl~DFGla~~~~~~----~~~~~~GT~~Y~APEvl-~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~  207 (322)
T d1s9ja_         133 PSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERL-QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPD  207 (322)
T ss_dssp             GGGEEECTTCCEEECCCCCCHHHHHH----TC---CCSSCCCCHHHH-HCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCC
T ss_pred             HHHeeECCCCCEEEeeCCCccccCCC----ccccccCCccccCchHH-cCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence            78999999999999999999875321    12345799999999554 56678999999999999999999999997533


Q ss_pred             cCchhHHHHHHHhhhh--------------------------hhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhcccc
Q 039452           81 SGEMTLKRWINDLLSV--------------------------SVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIE  134 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  134 (164)
                      .......... .....                          ...+........  ..........+.++.+++.+||+.
T Consensus       208 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~dli~~~L~~  284 (322)
T d1s9ja_         208 AKELELMFGC-QVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNE--PPPKLPSGVFSLEFQDFVNKCLIK  284 (322)
T ss_dssp             TTHHHHHC-------------------------------CCCCHHHHHHHHHTS--CCCCCCBTTBCHHHHHHHHHHTCS
T ss_pred             HHHHHHHHHH-HhcCCcccCCcccccccccccccccccccchhHHHHHhhhhcc--CCccCccccCCHHHHHHHHHHcCC
Confidence            2221110000 00000                          000000000000  000000012346689999999999


Q ss_pred             CccCCCCHHHHHH
Q 039452          135 SPERRINAKEIVT  147 (164)
Q Consensus       135 ~p~~Rps~~~vl~  147 (164)
                      ||.+|||++++++
T Consensus       285 dP~~R~ta~e~L~  297 (322)
T d1s9ja_         285 NPAERADLKQLMV  297 (322)
T ss_dssp             STTTSCCHHHHHT
T ss_pred             ChhHCcCHHHHhh
Confidence            9999999999987

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.94  E-value=8.7e-28  Score=166.99  Aligned_cols=125  Identities=22%  Similarity=0.316  Sum_probs=92.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.+|.+||+|||+++.+...    ......||+.|+|||.+.....++.++||||+||++|+|++|..||....
T Consensus       135 P~NILl~~~g~iKl~DFGla~~~~~~----~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~  210 (364)
T d1omwa3         135 PANILLDEHGHVRISDLGLACDFSKK----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK  210 (364)
T ss_dssp             GGGEEECSSSCEEECCCTTCEECSSS----CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSC
T ss_pred             cceeEEcCCCcEEEeeeceeeecCCC----cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCC
Confidence            78999999999999999999876322    22345799999999776666678899999999999999999999997543


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCC-----HHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRIN-----AKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~vl~  147 (164)
                      .....              .+......    .....+..+++.+.+++.+||+.||.+|||     ++++++
T Consensus       211 ~~~~~--------------~~~~~~~~----~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~  264 (364)
T d1omwa3         211 TKDKH--------------EIDRMTLT----MAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  264 (364)
T ss_dssp             SSCHH--------------HHHHHSSS----CCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred             HHHHH--------------HHHHhccc----CCCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence            32211              11111111    111122345667899999999999999999     678775

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=3.2e-28  Score=164.09  Aligned_cols=136  Identities=24%  Similarity=0.394  Sum_probs=90.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+||||+.++.+||+|||+++.... ..........+++.|+|||.+ ....++.++|||||||++|+|++|..|+....
T Consensus       141 p~NIll~~~~~~kl~DfGla~~~~~-~~~~~~~~~~gt~~y~aPE~~-~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~  218 (285)
T d1fmka3         141 AANILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTAPEAA-LYGRFTIKSDVWSFGILLTELTTKGRVPYPGM  218 (285)
T ss_dssp             GGGEEECGGGCEEECCCCTTC---------------CCGGGSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred             ceEEEECCCCcEEEcccchhhhccC-CCceeeccccccccccChHHH-hCCCCCcHHhhhcchHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999986522 122223345689999999555 45667899999999999999999766654322


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhh
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLF  157 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~  157 (164)
                      .....+             ..+....      ..+.+..++..+.+++.+||+.||++|||+++|++.|+.......
T Consensus       219 ~~~~~~-------------~~i~~~~------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~~  276 (285)
T d1fmka3         219 VNREVL-------------DQVERGY------RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE  276 (285)
T ss_dssp             CHHHHH-------------HHHHTTC------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred             CHHHHH-------------HHHHhcC------CCCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCCC
Confidence            111111             1111111      111234456679999999999999999999999998887665443

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.94  E-value=2.1e-27  Score=164.24  Aligned_cols=126  Identities=17%  Similarity=0.173  Sum_probs=90.3

Q ss_pred             CcceEec--CCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLD--DNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~--~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+|||++  .++.+||+|||+++.+..   ........||+.|+|||. ..+..++.++||||+||++|+|++|..||.+
T Consensus       152 p~NIll~~~~~~~vkL~DFG~a~~~~~---~~~~~~~~gT~~Y~aPEv-~~~~~~~~~~DiwSlGvilyell~G~~Pf~~  227 (350)
T d1koaa2         152 PENIMFTTKRSNELKLIDFGLTAHLDP---KQSVKVTTGTAEFAAPEV-AEGKPVGYYTDMWSVGVLSYILLSGLSPFGG  227 (350)
T ss_dssp             GGGEEESSTTSCCEEECCCTTCEECCT---TSCEEEECSCTTTCCHHH-HHTCCBCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             hhHeeeccCCCCeEEEeecchheeccc---ccccceecCcccccCHHH-HcCCCCChhHhhhhhhHHHHHHHhCCCCCCC
Confidence            7899996  468899999999987622   223345678999999955 4566688899999999999999999999964


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .....  ..           ..+..    ............+++.+.+++.+||+.||++|||++++++
T Consensus       228 ~~~~~--~~-----------~~i~~----~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~  279 (350)
T d1koaa2         228 ENDDE--TL-----------RNVKS----CDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALE  279 (350)
T ss_dssp             SSHHH--HH-----------HHHHH----TCCCSCCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             CCHHH--HH-----------HHHHh----CCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            32111  10           01111    1111111222345667899999999999999999999987

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=9.7e-28  Score=163.66  Aligned_cols=136  Identities=24%  Similarity=0.353  Sum_probs=95.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcC-CCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRK-KPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~-~p~~~~   79 (164)
                      |+|||++.++.+||+|||+++...   .........+|..|++||.+ ....++.++|||||||++|+|++|. .||...
T Consensus       155 p~NIL~~~~~~~kl~DfG~a~~~~---~~~~~~~~~gt~~y~aPE~l-~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~  230 (309)
T d1fvra_         155 ARNILVGENYVAKIADFGLSRGQE---VYVKKTMGRLPVRWMAIESL-NYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM  230 (309)
T ss_dssp             GGGEEECGGGCEEECCTTCEESSC---EECCC----CCTTTCCHHHH-HHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             cceEEEcCCCceEEcccccccccc---ccccccceecCCcccchHHh-ccCCCCccceeehhHHHHHHHHhcCCCCCCCC
Confidence            689999999999999999997642   11122334588999999555 4566889999999999999999976 456532


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHHHHHhhcc
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRN  159 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~~~  159 (164)
                      .  .....            ..+...      .....+..+++.+.+++.+||+.||++|||+++|++.|+.+.++....
T Consensus       231 ~--~~~~~------------~~i~~~------~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~~~~~  290 (309)
T d1fvra_         231 T--CAELY------------EKLPQG------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTY  290 (309)
T ss_dssp             C--HHHHH------------HHGGGT------CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSSCS
T ss_pred             C--HHHHH------------HHHHhc------CCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCcCC
Confidence            1  11111            111111      111223445677999999999999999999999999999998765543


Q ss_pred             C
Q 039452          160 V  160 (164)
Q Consensus       160 ~  160 (164)
                      +
T Consensus       291 ~  291 (309)
T d1fvra_         291 V  291 (309)
T ss_dssp             B
T ss_pred             C
Confidence            3

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.94  E-value=3.4e-27  Score=163.30  Aligned_cols=126  Identities=17%  Similarity=0.169  Sum_probs=90.8

Q ss_pred             CcceEec--CCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLD--DNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~--~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+|||++  .++.+||+|||++..+..   ........|++.|+||| +.....++.++||||+||++|+|++|..||.+
T Consensus       155 p~NILl~~~~~~~vkL~DFGla~~~~~---~~~~~~~~gt~~y~aPE-~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~  230 (352)
T d1koba_         155 PENIMCETKKASSVKIIDFGLATKLNP---DEIVKVTTATAEFAAPE-IVDREPVGFYTDMWAIGVLGYVLLSGLSPFAG  230 (352)
T ss_dssp             GGGEEESSTTCCCEEECCCTTCEECCT---TSCEEEECSSGGGCCHH-HHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred             cccccccccCCCeEEEeecccceecCC---CCceeeccCcccccCHH-HHcCCCCCCccchHHHHHHHHHHHhCCCCCCC
Confidence            7899997  578999999999987632   22234467899999995 55566789999999999999999999999974


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .....  ..           ..+..    ............+++.+.+|+.+||+.||.+|||+.++++
T Consensus       231 ~~~~~--~~-----------~~i~~----~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  282 (352)
T d1koba_         231 EDDLE--TL-----------QNVKR----CDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE  282 (352)
T ss_dssp             SSHHH--HH-----------HHHHH----CCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             CCHHH--HH-----------HHHHh----CCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            32111  00           01111    1111111122345667899999999999999999999976

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.93  E-value=4.8e-27  Score=158.04  Aligned_cols=136  Identities=21%  Similarity=0.359  Sum_probs=90.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCC-CccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGED-QSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+|||++.++..+++|||.+....... .........||+.|+|||.+ .+..++.++||||+||++|+|++|..||...
T Consensus       139 P~NIll~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~-~~~~~~~~~DiwSlGvilyelltG~~Pf~~~  217 (277)
T d1o6ya_         139 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA-RGDSVDARSDVYSLGCVLYEVLTGEPPFTGD  217 (277)
T ss_dssp             GGGEEEETTSCEEECCCTTCEECC----------------TTCCHHHH-TTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             CcccccCccccceeehhhhhhhhccccccccccccccCcccccCHHHH-cCCCCCcceecccchHHHHHHHhCCCCCCCc
Confidence            789999999999999999987653221 12233446799999999554 5566888999999999999999999999743


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCC-CHHHHHHHHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRI-NAKEIVTELSKIRD  154 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-s~~~vl~~l~~~~~  154 (164)
                      .....             ....+..    ...........+++.+.+++.+||+.||++|| |++++++.|.++.+
T Consensus       218 ~~~~~-------------~~~~~~~----~~~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~n  276 (277)
T d1o6ya_         218 SPVSV-------------AYQHVRE----DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN  276 (277)
T ss_dssp             SHHHH-------------HHHHHHC----CCCCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHC
T ss_pred             CHHHH-------------HHHHHhc----CCCCCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHhC
Confidence            21111             0011111    11111222334567799999999999999999 89999999888753

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1e-26  Score=157.48  Aligned_cols=126  Identities=14%  Similarity=0.184  Sum_probs=90.5

Q ss_pred             CcceEecCCc----eEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCC
Q 039452            1 PSNVLLDDNM----VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPT   76 (164)
Q Consensus         1 p~Nill~~~~----~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~   76 (164)
                      |+|||++.++    .+|++|||++..+...   .......+++.|+|||.+ ....++.++||||+||++|+|++|..||
T Consensus       141 p~Nill~~~~~~~~~vkl~DfG~a~~~~~~---~~~~~~~~t~~y~APE~~-~~~~~~~~~DiwSlGvilyell~g~~Pf  216 (293)
T d1jksa_         141 PENIMLLDRNVPKPRIKIIDFGLAHKIDFG---NEFKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPF  216 (293)
T ss_dssp             GGGEEESCSSSSSCCEEECCCTTCEECTTS---CBCSCCCCCGGGCCHHHH-TTCCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             cceEEEecCCCcccceEecchhhhhhcCCC---ccccccCCCCcccCHHHH-cCCCCCCcccchhhhHHHHHHHcCCCCC
Confidence            7899998766    5999999999876322   223345789999999554 5566889999999999999999999999


Q ss_pred             CccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           77 DEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .......  .               +..............+..++..+.+++.+||+.||++|||++++++
T Consensus       217 ~~~~~~~--~---------------~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  270 (293)
T d1jksa_         217 LGDTKQE--T---------------LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  270 (293)
T ss_dssp             CCSSHHH--H---------------HHHHHTTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CCCCHHH--H---------------HHHHHhcCCCCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            7432111  0               0011111111222233455677899999999999999999999986

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.93  E-value=7.5e-27  Score=156.84  Aligned_cols=127  Identities=20%  Similarity=0.251  Sum_probs=91.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhc-----cCcccCccchHhHHHHHHHHHhcCCC
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGR-----EGRVSTNGDVYSFGIMLMEAFTRKKP   75 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-----~~~~~~~~Di~s~g~~~~~~~~g~~p   75 (164)
                      |+|||++.++.+||+|||+++.+..   ........||..|.+||.+..     ...++.++||||+||++|+|++|..|
T Consensus       138 p~Nill~~~~~~kl~DFG~a~~~~~---~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~P  214 (277)
T d1phka_         138 PENILLDDDMNIKLTDFGFSCQLDP---GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP  214 (277)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECCT---TCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             cceEEEcCCCCeEEccchheeEccC---CCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCC
Confidence            7899999999999999999987632   222344678999999976642     33467889999999999999999999


Q ss_pred             CCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           76 TDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      |.......  ..           ..+...    ...........+++++.+++.+||+.||.+|||++++++
T Consensus       215 f~~~~~~~--~~-----------~~i~~~----~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~  269 (277)
T d1phka_         215 FWHRKQML--ML-----------RMIMSG----NYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  269 (277)
T ss_dssp             SCCSSHHH--HH-----------HHHHHT----CCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             CCCCCHHH--HH-----------HHHHhC----CCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            97532111  00           011111    111122223456677999999999999999999999875

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=6.5e-27  Score=160.95  Aligned_cols=123  Identities=20%  Similarity=0.264  Sum_probs=89.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.+|.+||+|||+|+....  .........||+.|+|| ++..+..++.++|+||+||++|+|++|..||....
T Consensus       133 P~NILl~~~g~vkl~DFG~a~~~~~--~~~~~~~~~GT~~Y~aP-E~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~  209 (337)
T d1o6la_         133 LENLMLDKDGHIKITDFGLCKEGIS--DGATMKTFCGTPEYLAP-EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD  209 (337)
T ss_dssp             GGGEEECTTSCEEECCCTTCBCSCC--TTCCBCCCEECGGGCCG-GGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             HHHeEecCCCCEEEeeccccccccc--CCcccccceeCHHHhhh-hhccCCCCChhhcccchhhHHHHHHHCCCCCCCcC
Confidence            7899999999999999999986522  12233456799999999 55556678999999999999999999999997532


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCC-----HHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRIN-----AKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~vl~  147 (164)
                      ...  ..   .        .+.. ..       ...+..+++++.+++.+||+.||.+|++     ++++++
T Consensus       210 ~~~--~~---~--------~i~~-~~-------~~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~  260 (337)
T d1o6la_         210 HER--LF---E--------LILM-EE-------IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             HHH--HH---H--------HHHH-CC-------CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             HHH--HH---H--------HHhc-CC-------CCCCccCCHHHHHHHHhhccCCchhhcccccccHHHHHc
Confidence            111  11   0        0110 00       1112345667899999999999999995     777775

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.1e-27  Score=159.38  Aligned_cols=116  Identities=24%  Similarity=0.261  Sum_probs=87.4

Q ss_pred             CcceEecC-CceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDD-NMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+|||++. ++.+||+|||+++....    .......||+.|+|||.+......+.++||||+||++|+|++|..||...
T Consensus       138 p~NIll~~~~~~vkl~DFG~a~~~~~----~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~  213 (273)
T d1xwsa_         138 DENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD  213 (273)
T ss_dssp             GGGEEEETTTTEEEECCCTTCEECCS----SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH
T ss_pred             ccceEEecCCCeEEECccccceeccc----ccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCc
Confidence            78999985 57999999999986521    12334679999999976665555677899999999999999999999631


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .                   ++......        .+..+++++.+++.+||+.||++|||++++++
T Consensus       214 ~-------------------~i~~~~~~--------~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  254 (273)
T d1xwsa_         214 E-------------------EIIRGQVF--------FRQRVSSECQHLIRWCLALRPSDRPTFEEIQN  254 (273)
T ss_dssp             H-------------------HHHHCCCC--------CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             h-------------------HHhhcccC--------CCCCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence            0                   11111100        11234566899999999999999999999986

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.9e-26  Score=157.02  Aligned_cols=141  Identities=21%  Similarity=0.275  Sum_probs=93.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||+++..   ..........||+.|+||| +.....++.++||||+||++|+|++|..||....
T Consensus       144 p~NILi~~~~~~kl~dfg~~~~~---~~~~~~~~~~gT~~Y~APE-~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~  219 (305)
T d1blxa_         144 PQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVTLWYRAPE-VLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS  219 (305)
T ss_dssp             GGGEEECTTCCEEECSCCSCCCC---CGGGGGCCCCCCCTTCCHH-HHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             ccEEEEcCCCCeeecchhhhhhh---cccccCCCcccChhhcCcc-hhcCCCCChhehhhchHHHHHHHHHCCCCCCCCC
Confidence            78999999999999999998764   2222344567999999995 4456678999999999999999999999997532


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhh--------cccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDAN--------LLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ... .+....... ...........        ..............+++.+.+|+.+||+.||++|||++++++
T Consensus       220 ~~~-~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~  292 (305)
T d1blxa_         220 DVD-QLGKILDVI-GLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  292 (305)
T ss_dssp             HHH-HHHHHHHHH-CCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHH-HHHHHHHhh-CCCchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            211 111111110 00000000000        000011111122345667889999999999999999999876

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.2e-26  Score=159.67  Aligned_cols=130  Identities=18%  Similarity=0.197  Sum_probs=91.3

Q ss_pred             CcceEecC---CceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCC
Q 039452            1 PSNVLLDD---NMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTD   77 (164)
Q Consensus         1 p~Nill~~---~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~   77 (164)
                      |+|||++.   .+.+||+|||+++.....   .......||+.|+||| +.....++.++||||+||++|+|++|..||.
T Consensus       139 p~NIll~~~~~~~~~Kl~DFG~a~~~~~~---~~~~~~~gt~~y~aPE-~~~~~~y~~~~DiwSlGvily~lltg~~Pf~  214 (335)
T d2ozaa1         139 PENLLYTSKRPNAILKLTDFGFAKETTSH---NSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFY  214 (335)
T ss_dssp             GGGEEESCSSTTCCEEECCCTTCEECCCC---CCCCCCSCCCSSCCCC-CCCGGGGSHHHHHHHHHHHHHHHTTSSCSCE
T ss_pred             ccccccccccccccccccccceeeeccCC---CccccccCCcccCCcH-HHcCCCCCHHHHHHhhchhHHHHhhCCCCCC
Confidence            78999975   567999999999875322   2234567999999994 5556668899999999999999999999997


Q ss_pred             ccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           78 EMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ........             ..+...........+......+++++.+++.+||+.||++|||+.++++
T Consensus       215 ~~~~~~~~-------------~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  271 (335)
T d2ozaa1         215 SNHGLAIS-------------PGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  271 (335)
T ss_dssp             ETTCC---------------------CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CCCHHHHH-------------HHHHHHHhcCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            53221110             0011111111111122233456778999999999999999999999976

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.4e-26  Score=157.17  Aligned_cols=144  Identities=23%  Similarity=0.174  Sum_probs=94.3

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||.++...  ..........|++.|+|||.+......+.++|+||+||++|+|++|+.||....
T Consensus       130 peNIl~~~~~~~kl~DFG~a~~~~--~~~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~  207 (298)
T d1gz8a_         130 PQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS  207 (298)
T ss_dssp             GGGEEECTTSCEEECSTTHHHHHC--CCSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             chheeecccCcceeccCCcceecc--CCcccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCC
Confidence            789999999999999999998752  222233445789999999777766667889999999999999999999997532


Q ss_pred             cCchhHHHHHHHhhh---hhhHHHhhhhc------ccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLS---VSVMEVVDANL------LTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~---~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ... .+.........   ...........      .............++..+.+++.+||+.||.+|||++++++
T Consensus       208 ~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~  282 (298)
T d1gz8a_         208 EID-QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA  282 (298)
T ss_dssp             HHH-HHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHH-HHHHHHHhcCCCchhhccccccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence            211 11111111000   00000000000      00000111112244567899999999999999999999987

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.93  E-value=1.5e-26  Score=158.02  Aligned_cols=120  Identities=22%  Similarity=0.290  Sum_probs=88.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.+|.+||+|||+++.+..     ......||+.|+||| +..+..++.++||||+||++|+|++|..||....
T Consensus       132 p~NILl~~~g~vkL~DFG~a~~~~~-----~~~~~~Gt~~Y~APE-~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~  205 (316)
T d1fota_         132 PENILLDKNGHIKITDFGFAKYVPD-----VTYTLCGTPDYIAPE-VVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN  205 (316)
T ss_dssp             GGGEEECTTSCEEECCCSSCEECSS-----CBCCCCSCTTTCCHH-HHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred             chheeEcCCCCEEEecCccceEecc-----ccccccCcccccCHH-HHcCCCCCchhhccccchhHHHHHhCCCCCCCcC
Confidence            7899999999999999999987622     123457999999995 4456668899999999999999999999997432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCC-----CHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRI-----NAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~vl~  147 (164)
                      ...  .           ...+....        ...+..+++.+.+++.+||..||.+|+     |++++++
T Consensus       206 ~~~--~-----------~~~i~~~~--------~~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~  256 (316)
T d1fota_         206 TMK--T-----------YEKILNAE--------LRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  256 (316)
T ss_dssp             HHH--H-----------HHHHHHCC--------CCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             HHH--H-----------HHHHHcCC--------CCCCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHc
Confidence            111  0           00111110        011233456689999999999999996     8999876

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=1.1e-26  Score=160.56  Aligned_cols=120  Identities=18%  Similarity=0.219  Sum_probs=88.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.+|.+||+|||+++.+.+     ......||+.|+|||.+ .+..++.++||||+||++|+|++|..||....
T Consensus       169 P~NILl~~~g~ikL~DFG~a~~~~~-----~~~~~~Gt~~Y~APE~~-~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~  242 (350)
T d1rdqe_         169 PENLLIDQQGYIQVTDFGFAKRVKG-----RTWTLCGTPEALAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ  242 (350)
T ss_dssp             GGGEEECTTSCEEECCCTTCEECSS-----CBCCCEECGGGCCHHHH-TTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             HHHcccCCCCCEEeeeceeeeeccc-----ccccccCccccCCHHHH-cCCCCCccccccchhHHHHHHHhCCCCCCCcC
Confidence            7899999999999999999987622     12345799999999554 46668899999999999999999999997431


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCC-----CHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRI-----NAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~vl~  147 (164)
                        ......           .+....        ...+..+++++.+++.+||..||.+|+     |++++++
T Consensus       243 --~~~~~~-----------~i~~~~--------~~~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~  293 (350)
T d1rdqe_         243 --PIQIYE-----------KIVSGK--------VRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             --HHHHHH-----------HHHHCC--------CCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             --HHHHHH-----------HHhcCC--------CCCCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHc
Confidence              111110           111110        011234566789999999999999994     8999986

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.92  E-value=1.6e-26  Score=156.06  Aligned_cols=144  Identities=19%  Similarity=0.177  Sum_probs=91.4

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+|++|||.+.....  .........+++.|++||.+.....++.++|+||+||++|+|++|+.||....
T Consensus       128 p~NIll~~~~~~kl~DfG~a~~~~~--~~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~  205 (286)
T d1ob3a_         128 PQNLLINREGELKIADFGLARAFGI--PVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS  205 (286)
T ss_dssp             GGGEEECTTSCEEECCTTHHHHHCC-----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             CceeeEcCCCCEEecccccceeccc--CccccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCC
Confidence            7899999999999999999977522  22223345688999999887777778999999999999999999999997532


Q ss_pred             cCchhHHHHHHHhhh---hhhHHHhhh------hcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLS---VSVMEVVDA------NLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~---~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ... .+.........   .........      ...............+++.+.+++.+||+.||++|||++++++
T Consensus       206 ~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         206 EAD-QLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             HHH-HHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHH-HHHHHHHhhCCCChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            211 11111111000   000000000      0000011111122345567899999999999999999999975

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.92  E-value=9.5e-26  Score=153.17  Aligned_cols=142  Identities=14%  Similarity=0.051  Sum_probs=96.5

Q ss_pred             CcceEecC---CceEEEeccccceeccCCCCc-----cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhc
Q 039452            1 PSNVLLDD---NMVAHLSDFGIAKLLIGEDQS-----MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTR   72 (164)
Q Consensus         1 p~Nill~~---~~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g   72 (164)
                      |+|||++.   +..++++|||+++.+......     .......||+.|+|||.+ .+..++.++|||||||++|+|++|
T Consensus       131 p~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwSlG~~l~el~tg  209 (299)
T d1ckia_         131 PDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTH-LGIEQSRRDDLESLGYVLMYFNLG  209 (299)
T ss_dssp             GGGEEECCGGGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHH-TTBCCCHHHHHHHHHHHHHHHHHS
T ss_pred             HhhccccccCCCceeeeeccCcceeccccccccceeccccCCcCCCccccCHHHH-hCCCCCChhhEEecCHHHHHHHhC
Confidence            78999863   557999999999886432221     123345799999999554 455688999999999999999999


Q ss_pred             CCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHHHH
Q 039452           73 KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI  152 (164)
Q Consensus        73 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~  152 (164)
                      ..||.............  .        .....   ...........+++++.+++..||+.||++||+++++.+.|+.+
T Consensus       210 ~~P~~~~~~~~~~~~~~--~--------~~~~~---~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~  276 (299)
T d1ckia_         210 SLPWQGLKAATKRQKYE--R--------ISEKK---MSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL  276 (299)
T ss_dssp             SCTTCCCC-------HH--H--------HHHHH---HHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHH
T ss_pred             CCcccccchHHHHHHHH--H--------hhccc---CCCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence            99997543322211100  0        00000   00111112334567799999999999999999999999999887


Q ss_pred             HHHh
Q 039452          153 RDSL  156 (164)
Q Consensus       153 ~~~~  156 (164)
                      ....
T Consensus       277 ~~~~  280 (299)
T d1ckia_         277 FHRQ  280 (299)
T ss_dssp             HHHH
T ss_pred             HHHc
Confidence            6543

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.1e-25  Score=154.00  Aligned_cols=145  Identities=20%  Similarity=0.219  Sum_probs=92.5

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc--cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS--MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+|||++.++.+||+|||+++.+......  .......||+.|+|||.+.....++.++||||+||++|+|++|+.||..
T Consensus       145 p~NILl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~  224 (318)
T d3blha1         145 AANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQG  224 (318)
T ss_dssp             GGGEEECTTSCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             chheeecCCCcEEeeecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCC
Confidence            78999999999999999999775322211  1223356899999997777666788999999999999999999999974


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHh------------hhhcccccchh-hhhHHHHHHHHHHHHhhccccCccCCCCHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVV------------DANLLTREDRH-FAAKQQCVSFVFNLAMECTIESPERRINAKEI  145 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~-~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v  145 (164)
                      ..  .......+............            ........... ........+.+.+|+.+||+.||++|||++++
T Consensus       225 ~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~el  302 (318)
T d3blha1         225 NT--EQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA  302 (318)
T ss_dssp             SS--HHHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred             CC--HHHHHHHHHHhcCCCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHH
Confidence            32  11111111111111000000            00000000000 00111234567899999999999999999999


Q ss_pred             HH
Q 039452          146 VT  147 (164)
Q Consensus       146 l~  147 (164)
                      ++
T Consensus       303 L~  304 (318)
T d3blha1         303 LN  304 (318)
T ss_dssp             HH
T ss_pred             Hc
Confidence            86

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=8e-26  Score=156.55  Aligned_cols=142  Identities=21%  Similarity=0.192  Sum_probs=94.1

Q ss_pred             CcceEecCCc-eEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDDNM-VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+|||++.++ .+||+|||++..+....   ......|+..|+|||++.....++.++||||+||++|+|++|..||...
T Consensus       150 p~NILl~~~~~~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~  226 (350)
T d1q5ka_         150 PQNLLLDPDTAVLKLCDFGSAKQLVRGE---PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD  226 (350)
T ss_dssp             GGGEEECTTTCCEEECCCTTCEECCTTS---CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCS
T ss_pred             cceEEEecCCCceeEecccchhhccCCc---ccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCC
Confidence            7899999765 89999999998763222   2334578999999988777777899999999999999999999999743


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhccc----------ccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLT----------REDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ... ..+.... ........+.+......          ............++.+.+|+.+||..||.+|||+.|+++
T Consensus       227 ~~~-~~l~~i~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  302 (350)
T d1q5ka_         227 SGV-DQLVEII-KVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  302 (350)
T ss_dssp             SHH-HHHHHHH-HHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CHH-HHHHHHH-HHhCCChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            211 1111111 11111111111111000          000001112235667899999999999999999999986

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.8e-25  Score=154.58  Aligned_cols=140  Identities=21%  Similarity=0.214  Sum_probs=94.0

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+|++|||.++....     ......+++.|+|||.+.....++.++||||+||++|+|++|..||....
T Consensus       149 p~NIL~~~~~~~kl~Dfg~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~  223 (346)
T d1cm8a_         149 PGNLAVNEDCELKILDFGLARQADS-----EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSD  223 (346)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECCS-----SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             cchhhcccccccccccccceeccCC-----ccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCC
Confidence            7899999999999999999987521     22346789999999777666678899999999999999999999997532


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhh-----------hhccc-ccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVD-----------ANLLT-REDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~-~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .. ..+... .........+...           ..... ...........+++.+.+|+.+||..||.+|||++++++
T Consensus       224 ~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~  300 (346)
T d1cm8a_         224 HL-DQLKEI-MKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA  300 (346)
T ss_dssp             HH-HHHHHH-HHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             hH-HHHHHH-HhccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            11 111111 1111111111110           00000 011111122344567889999999999999999999987

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.1e-25  Score=154.13  Aligned_cols=145  Identities=19%  Similarity=0.173  Sum_probs=94.8

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCc-cccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS-MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+|||++.++.+||+|||++......... .......|++.|+|||.+.....++.++||||+||++|+|++|..||...
T Consensus       137 p~NILl~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~  216 (345)
T d1pmea_         137 PSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK  216 (345)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             cceEEECCCCCEEEcccCceeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCC
Confidence            78999999999999999999875322221 12344668999999977766777889999999999999999999999753


Q ss_pred             ccCchhHHHHHHHhhhhh------------hHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVS------------VMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .....  ...........            ......................++..+.+++.+||..||.+|||+.++++
T Consensus       217 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~  294 (345)
T d1pmea_         217 HYLDQ--LNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA  294 (345)
T ss_dssp             SHHHH--HHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CHHHH--HHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            22111  11111100000            00000000000111111122344567899999999999999999999987

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.2e-26  Score=158.72  Aligned_cols=123  Identities=21%  Similarity=0.283  Sum_probs=89.2

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||+++...  ..........||+.|+|||.+ ....++.++||||+||++|+|++|..||.+..
T Consensus       131 p~NiL~~~~~~~kl~DFG~a~~~~--~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwSlGvilyemltG~~PF~~~~  207 (320)
T d1xjda_         131 LDNILLDKDGHIKIADFGMCKENM--LGDAKTNTFCGTPDYIAPEIL-LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD  207 (320)
T ss_dssp             GGGEEECTTSCEEECCCTTCBCCC--CTTCCBCCCCSCGGGCCHHHH-TTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             ccceeecCCCceeccccchhhhcc--cccccccccCCCCCcCCHHHH-cCCCCCchhhhhhhhHHHHHHHhCCCCCCCCC
Confidence            789999999999999999998652  222233446789999999555 45668899999999999999999999997432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHH-HHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAK-EIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~-~vl~  147 (164)
                      ...  ...           .+. ..   .    ...+..+++.+.+++.+||..||++|||+. ++++
T Consensus       208 ~~~--~~~-----------~i~-~~---~----~~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~  254 (320)
T d1xjda_         208 EEE--LFH-----------SIR-MD---N----PFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ  254 (320)
T ss_dssp             HHH--HHH-----------HHH-HC---C----CCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             HHH--HHH-----------HHH-cC---C----CCCCccCCHHHHHHHHHhcccCCCCCcCHHHHHHh
Confidence            111  110           000 00   0    011234566799999999999999999985 6753

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.92  E-value=8.7e-25  Score=150.14  Aligned_cols=152  Identities=18%  Similarity=0.179  Sum_probs=98.5

Q ss_pred             CcceEecCC-ceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDDN-MVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+|||++.+ +.+||+|||+++.....   .......+|+.|+|||.+.....++.++|+||+||+++++++|..||...
T Consensus       157 p~NILi~~~~~~vkl~DFG~a~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~  233 (328)
T d3bqca1         157 PHNVMIDHEHRKLRLIDWGLAEFYHPG---QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHG  233 (328)
T ss_dssp             GGGEEEETTTTEEEECCGGGCEECCTT---CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred             ccceEEcCCCCeeeecccccceeccCC---CcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCC
Confidence            789999864 57999999999875322   22344578999999977776666889999999999999999999999754


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccc-----------------cchhhhhHHHHHHHHHHHHhhccccCccCCCCH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTR-----------------EDRHFAAKQQCVSFVFNLAMECTIESPERRINA  142 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  142 (164)
                      ..............................                 ..........+++++.+|+.+||..||.+|||+
T Consensus       234 ~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta  313 (328)
T d3bqca1         234 HDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA  313 (328)
T ss_dssp             SSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCH
T ss_pred             chhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCH
Confidence            332222221111111111111111110000                 001111223456779999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhccCC
Q 039452          143 KEIVTELSKIRDSLFRNVG  161 (164)
Q Consensus       143 ~~vl~~l~~~~~~~~~~~~  161 (164)
                      +++++      ...|.++.
T Consensus       314 ~e~L~------Hp~F~~v~  326 (328)
T d3bqca1         314 REAME------HPYFYTVV  326 (328)
T ss_dssp             HHHHT------SGGGTTSC
T ss_pred             HHHhc------CcccCCCC
Confidence            99986      45554444

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.6e-25  Score=152.18  Aligned_cols=126  Identities=16%  Similarity=0.236  Sum_probs=89.9

Q ss_pred             CcceEecC--CceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCc
Q 039452            1 PSNVLLDD--NMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDE   78 (164)
Q Consensus         1 p~Nill~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~   78 (164)
                      |+|||++.  .+.+||+|||+++....   ........+++.|++|| ......++.++||||+||++|+|++|..||..
T Consensus       130 p~NIll~~~~~~~ikl~DFG~~~~~~~---~~~~~~~~~t~~y~ape-~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~  205 (321)
T d1tkia_         130 PENIIYQTRRSSTIKIIEFGQARQLKP---GDNFRLLFTAPEYYAPE-VHQHDVVSTATDMWSLGTLVYVLLSGINPFLA  205 (321)
T ss_dssp             GGGEEESSSSCCCEEECCCTTCEECCT---TCEEEEEESCGGGSCHH-HHTTCEECHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             ccceeecCCCceEEEEcccchhhcccc---CCcccccccccccccch-hccCCCCCchhhcccHHHHHHHHHhCCCCCCC
Confidence            78999984  45799999999987522   22234456889999995 44566688899999999999999999999974


Q ss_pred             cccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           79 MFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      .....  .           ...+..    ............+++.+.+++.+||..||++|||++++++
T Consensus       206 ~~~~~--~-----------~~~i~~----~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  257 (321)
T d1tkia_         206 ETNQQ--I-----------IENIMN----AEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             SSHHH--H-----------HHHHHH----TCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CCHHH--H-----------HHHHHh----CCCCCChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            32111  0           011111    1111122223345677899999999999999999999987

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=3.5e-25  Score=149.81  Aligned_cols=144  Identities=21%  Similarity=0.194  Sum_probs=93.1

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+||+|||.++....  .........++..|.+||.+.....++.++||||+||++|+|++|..||....
T Consensus       129 P~NIli~~~~~~kl~DFG~a~~~~~--~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~  206 (292)
T d1unla_         129 PQNLLINRNGELKLANFGLARAFGI--PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN  206 (292)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECCS--CCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCS
T ss_pred             CcccccccCCceeeeecchhhcccC--CCccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCC
Confidence            7899999999999999999987632  22223334567788888666656567899999999999999999999975433


Q ss_pred             cCchhHHHHHHHhhhhhhH----HHhhhh------cccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVM----EVVDAN------LLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~----~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      ........ +.........    ......      ..............+++.+.+|+.+||+.||.+|||++|+++
T Consensus       207 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~  282 (292)
T d1unla_         207 DVDDQLKR-IFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             SHHHHHHH-HHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             CHHHHHHH-HHhhcCCCChhhhhhhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            22222221 1111111000    000000      000111112222345667899999999999999999999876

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.91  E-value=3e-24  Score=145.25  Aligned_cols=143  Identities=13%  Similarity=0.093  Sum_probs=99.1

Q ss_pred             CcceEecC-----CceEEEeccccceeccCCCCc-----cccccccccccccCchhhhccCcccCccchHhHHHHHHHHH
Q 039452            1 PSNVLLDD-----NMVAHLSDFGIAKLLIGEDQS-----MTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAF   70 (164)
Q Consensus         1 p~Nill~~-----~~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~   70 (164)
                      |+|||++.     ++.+||+|||+++.+......     .......||+.|+|||.+ ....++.++|+||+|+++|+|+
T Consensus       129 p~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~-~~~~~~~~~DiwSlG~~l~ell  207 (293)
T d1csna_         129 PDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTH-LGREQSRRDDLEALGHVFMYFL  207 (293)
T ss_dssp             GGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHH-TTCCCCHHHHHHHHHHHHHHHH
T ss_pred             ccceeecCcccccCCceEEcccceeEEcccCccccceeecccCceEEchhhcCHHHh-cCCCCChHHHHHHhhHHHHHHH
Confidence            78999964     578999999999886422111     122345799999999555 4566889999999999999999


Q ss_pred             hcCCCCCccccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHHHHH
Q 039452           71 TRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELS  150 (164)
Q Consensus        71 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~  150 (164)
                      +|..||...........  ...        +.....   ..........+++++.+++..|+..+|++||+++.+.+.|+
T Consensus       208 tg~~Pf~~~~~~~~~~~--~~~--------i~~~~~---~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~  274 (293)
T d1csna_         208 RGSLPWQGLKAATNKQK--YER--------IGEKKQ---STPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFS  274 (293)
T ss_dssp             HSSCTTSSCCSCCHHHH--HHH--------HHHHHH---HSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred             hCCCcCCCccchhHHHH--HHH--------HHhccC---CCChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHH
Confidence            99999975433322111  000        000000   00111122345667899999999999999999999999888


Q ss_pred             HHHHHhh
Q 039452          151 KIRDSLF  157 (164)
Q Consensus       151 ~~~~~~~  157 (164)
                      ++.+...
T Consensus       275 ~~~~~~~  281 (293)
T d1csna_         275 KVLERLN  281 (293)
T ss_dssp             HHHHHTT
T ss_pred             HHHHHcC
Confidence            8876654

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.1e-24  Score=149.19  Aligned_cols=129  Identities=23%  Similarity=0.307  Sum_probs=89.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccC-cccCccchHhHHHHHHHHHhcCCCCCcc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREG-RVSTNGDVYSFGIMLMEAFTRKKPTDEM   79 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~~Di~s~g~~~~~~~~g~~p~~~~   79 (164)
                      |+|||++.++.+||+|||+++.+.... ........|++.|++||.+.... .++.++||||+||++|+|++|..||...
T Consensus       157 p~Nill~~~~~vkL~DFG~a~~~~~~~-~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~  235 (322)
T d1vzoa_         157 LENILLDSNGHVVLTDFGLSKEFVADE-TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVD  235 (322)
T ss_dssp             GGGEEECTTSCEEESCSSEEEECCGGG-GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCT
T ss_pred             ccceeecCCCCEEEeeccchhhhcccc-cccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence            789999999999999999998753211 22234457899999997775433 4678899999999999999999999764


Q ss_pred             ccCchhHHHHHHHhhhhhhHHHhhhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCC-----HHHHHH
Q 039452           80 FSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRIN-----AKEIVT  147 (164)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~vl~  147 (164)
                      ........             +.......    ....+..+++.+.+++.+||+.||.+|||     ++++++
T Consensus       236 ~~~~~~~~-------------i~~~~~~~----~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~  291 (322)
T d1vzoa_         236 GEKNSQAE-------------ISRRILKS----EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  291 (322)
T ss_dssp             TSCCCHHH-------------HHHHHHHC----CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             CHHHHHHH-------------HHHhcccC----CCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence            33322111             01000000    01112345667999999999999999994     788875

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=9.7e-24  Score=145.91  Aligned_cols=140  Identities=18%  Similarity=0.189  Sum_probs=89.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.+|++|||.+...     ........|+..|+|||.......++.++|+||+||++|+|++|..||....
T Consensus       149 p~NILi~~~~~~kl~dfg~a~~~-----~~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~  223 (348)
T d2gfsa1         149 PSNLAVNEDCELKILDFGLARHT-----DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD  223 (348)
T ss_dssp             GGGEEECTTCCEEECCC----CC-----TGGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             Cccccccccccccccccchhccc-----CcccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCC
Confidence            78999999999999999998754     1223345688999999777766678899999999999999999999997432


Q ss_pred             cCchhHHHHHHHhhhhhhHHHh------------hhhcccccchhhhhHHHHHHHHHHHHhhccccCccCCCCHHHHHH
Q 039452           81 SGEMTLKRWINDLLSVSVMEVV------------DANLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVT  147 (164)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~  147 (164)
                        .......+.........+..            .................+++.+.+|+.+||+.||.+|||++++++
T Consensus       224 --~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~  300 (348)
T d2gfsa1         224 --HIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  300 (348)
T ss_dssp             --HHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             --HHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhc
Confidence              11111111111111111100            000000011111112345667899999999999999999999987

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=3.1e-23  Score=143.68  Aligned_cols=142  Identities=20%  Similarity=0.163  Sum_probs=85.9

Q ss_pred             CcceEecCCceEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCCCCCccc
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMF   80 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~p~~~~~   80 (164)
                      |+|||++.++.++++|||.++...   .........+|+.|+|||.+ .+..++.++||||+||+++++++|+.||....
T Consensus       147 P~Nil~~~~~~~kl~df~~~~~~~---~~~~~~~~~~t~~y~aPE~l-~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~  222 (355)
T d2b1pa1         147 PSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI-LGMGYKENVDIWSVGCIMGEMVRHKILFPGRD  222 (355)
T ss_dssp             GGGEEECTTCCEEECCCCC------------------CCTTCCHHHH-TTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             ccccccccccceeeechhhhhccc---cccccccccccccccChhhh-cCCCCCCCcccccccchHHHHhhCCCCCCCCC
Confidence            789999999999999999987642   22334456789999999655 45678899999999999999999999996432


Q ss_pred             cCchhHHHHHHHhh----------hhhhHHHhhhhccc------------ccchhhhhHHHHHHHHHHHHhhccccCccC
Q 039452           81 SGEMTLKRWINDLL----------SVSVMEVVDANLLT------------REDRHFAAKQQCVSFVFNLAMECTIESPER  138 (164)
Q Consensus        81 ~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  138 (164)
                      .. ...........          ..............            ............+..+.+|+.+||..||++
T Consensus       223 ~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~  301 (355)
T d2b1pa1         223 YI-DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK  301 (355)
T ss_dssp             HH-HHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTT
T ss_pred             HH-HHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhH
Confidence            11 11111111110          00011111111000            001111223456778999999999999999


Q ss_pred             CCCHHHHHH
Q 039452          139 RINAKEIVT  147 (164)
Q Consensus       139 Rps~~~vl~  147 (164)
                      |||++++++
T Consensus       302 R~ta~elL~  310 (355)
T d2b1pa1         302 RISVDDALQ  310 (355)
T ss_dssp             SCCHHHHHT
T ss_pred             CcCHHHHhc
Confidence            999999985

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.85  E-value=8.5e-22  Score=136.70  Aligned_cols=140  Identities=16%  Similarity=0.140  Sum_probs=87.6

Q ss_pred             CcceEecCCc------eEEEeccccceeccCCCCccccccccccccccCchhhhccCcccCccchHhHHHHHHHHHhcCC
Q 039452            1 PSNVLLDDNM------VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKK   74 (164)
Q Consensus         1 p~Nill~~~~------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di~s~g~~~~~~~~g~~   74 (164)
                      |+|||++.++      .++++|||.+....     .......|++.|+|||.+. ...++.++|+||+||++++|++|+.
T Consensus       154 p~NIll~~~~~~~~~~~~kl~dfg~s~~~~-----~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlG~il~el~~g~~  227 (362)
T d1q8ya_         154 PENVLMEIVDSPENLIQIKIADLGNACWYD-----EHYTNSIQTREYRSPEVLL-GAPWGCGADIWSTACLIFELITGDF  227 (362)
T ss_dssp             GGGEEEEEEETTTTEEEEEECCCTTCEETT-----BCCCSCCSCGGGCCHHHHH-TCCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             hhHeeeeccCcccccceeeEeecccccccc-----cccccccccccccChhhcc-ccCCCccccccchHHHHHHHHHCCC
Confidence            7899998654      48999999987642     1223457899999996554 5667899999999999999999999


Q ss_pred             CCCccccCc-----hhHHHHHHHhhhhhhHHHhhhhc---------------cccc--c------hhhhhHHHHHHHHHH
Q 039452           75 PTDEMFSGE-----MTLKRWINDLLSVSVMEVVDANL---------------LTRE--D------RHFAAKQQCVSFVFN  126 (164)
Q Consensus        75 p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~--~------~~~~~~~~~~~~~~~  126 (164)
                      ||.......     ......+. ..............               ....  .      .........++.+.+
T Consensus       228 pF~~~~~~~~~~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  306 (362)
T d1q8ya_         228 LFEPDEGHSYTKDDDHIAQIIE-LLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISD  306 (362)
T ss_dssp             CC---------CHHHHHHHHHH-HHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHH
T ss_pred             CCCCCccccccchhHHHHHHHH-HhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHH
Confidence            997432111     11111111 11111111111000               0000  0      011112456778999


Q ss_pred             HHhhccccCccCCCCHHHHHH
Q 039452          127 LAMECTIESPERRINAKEIVT  147 (164)
Q Consensus       127 l~~~cl~~~p~~Rps~~~vl~  147 (164)
                      |+.+||..||.+|||++++++
T Consensus       307 ll~~mL~~dP~~Rpta~e~L~  327 (362)
T d1q8ya_         307 FLSPMLQLDPRKRADAGGLVN  327 (362)
T ss_dssp             HHGGGGCSSTTTCBCHHHHHT
T ss_pred             HHHHHCCCChhHCcCHHHHhc
Confidence            999999999999999999976

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.28  E-value=0.0012  Score=40.32  Aligned_cols=22  Identities=23%  Similarity=0.267  Sum_probs=18.8

Q ss_pred             CcceEecCCceEEEeccccceec
Q 039452            1 PSNVLLDDNMVAHLSDFGIAKLL   23 (164)
Q Consensus         1 p~Nill~~~~~~kl~dfg~~~~~   23 (164)
                      |+|||++.++ ++|+|||.+...
T Consensus       131 P~NILv~~~~-~~liDFG~a~~~  152 (191)
T d1zara2         131 QYNVLVSEEG-IWIIDFPQSVEV  152 (191)
T ss_dssp             TTSEEEETTE-EEECCCTTCEET
T ss_pred             hhheeeeCCC-EEEEECCCcccC
Confidence            8999999765 789999998765