Citrus Sinensis ID: 039469
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 329 | ||||||
| 224089615 | 432 | predicted protein [Populus trichocarpa] | 0.939 | 0.715 | 0.445 | 1e-68 | |
| 255540357 | 429 | 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltr | 0.863 | 0.662 | 0.410 | 5e-59 | |
| 255540353 | 435 | Anthranilate N-benzoyltransferase protei | 0.899 | 0.680 | 0.412 | 3e-55 | |
| 224141095 | 430 | predicted protein [Populus trichocarpa] | 0.890 | 0.681 | 0.397 | 1e-54 | |
| 224133288 | 441 | predicted protein [Populus trichocarpa] | 0.890 | 0.664 | 0.394 | 2e-53 | |
| 225425908 | 433 | PREDICTED: vinorine synthase-like [Vitis | 0.844 | 0.642 | 0.334 | 6e-49 | |
| 297814832 | 442 | transferase family protein [Arabidopsis | 0.942 | 0.701 | 0.361 | 6e-48 | |
| 15230978 | 442 | HXXXD-type acyl-transferase-like protein | 0.942 | 0.701 | 0.358 | 9e-48 | |
| 9279609 | 455 | acetyltranferase-like protein [Arabidops | 0.942 | 0.681 | 0.358 | 9e-48 | |
| 255540345 | 437 | Anthranilate N-benzoyltransferase protei | 0.927 | 0.697 | 0.351 | 1e-46 |
| >gi|224089615|ref|XP_002308780.1| predicted protein [Populus trichocarpa] gi|222854756|gb|EEE92303.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 147/330 (44%), Positives = 211/330 (63%), Gaps = 21/330 (6%)
Query: 3 DVQIISTEAIKPSSPTPKHLRTYELSMLDQMFSNLYMPFVFFYS-ANKHQDFRKNSDFLK 61
+VQIIS E +KPSS TP+HLRTY+LS+LDQ+ +Y+P + FYS A++H KNSD LK
Sbjct: 2 EVQIISKEILKPSSSTPQHLRTYKLSVLDQLAPPIYIPIILFYSPASEH--LCKNSDHLK 59
Query: 62 QSLAKTLTHYYPLAGRFVDSFSVECNDHGVTFIEAQVGCDMSKFLQPPNMGVMQQLIPPS 121
+S ++TLTH+YP AGR D FSV+CND G FIEA+V D+S L+ ++ QQL+P S
Sbjct: 60 ESFSQTLTHFYPFAGRIKDDFSVDCNDDGAEFIEARVAGDISMVLEQADINQQQQLLPCS 119
Query: 122 P--QSLRLEASERALLAVQVNYFSTGDVAIGICIWHGLADGSAISNFMKLWAEINRGVNE 179
P +S +L ++++ LAVQVNYF+ G VAI ICIWH +AD S ++ F+ WA I+R N
Sbjct: 120 PYGKSSKL-STDQVTLAVQVNYFNCGGVAISICIWHAVADASTLATFVNCWAAISRDPN- 177
Query: 180 NICNNVVLDCTSLFPPH--SSLK-DQHIKPQLTSKVVFKRLFFDGKKIVALKEKVNKEIM 236
N+ + VV DCT+LFPP SS +K ++S++V KR FDG K+ AL+++V
Sbjct: 178 NVIDEVVFDCTTLFPPQDLSSFSLHSFVKEDVSSEIVMKRFLFDGSKVAALRDEVGNG-- 235
Query: 237 VGSFDHELQASRFMVVSSLIWGAFIAVAQERKRAINNKLYSHAMYYTMNLRSKMNPPMIP 296
S D + SRF+ VS+LI A + V +E N + +A ++LR ++ PP+
Sbjct: 236 -PSLD---RPSRFIAVSTLILTAMMTVTRE-----NEAMQINAATIAVDLRRRLKPPVPK 286
Query: 297 QCMGNIFRFVRAEWPLVGDDDIEATSLVKK 326
Q +GNIF+ A+WP +++ L K
Sbjct: 287 QSIGNIFQVTIAKWPESESNELSYNGLAGK 316
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255540357|ref|XP_002511243.1| 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase, putative [Ricinus communis] gi|223550358|gb|EEF51845.1| 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|255540353|ref|XP_002511241.1| Anthranilate N-benzoyltransferase protein, putative [Ricinus communis] gi|223550356|gb|EEF51843.1| Anthranilate N-benzoyltransferase protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|224141095|ref|XP_002323910.1| predicted protein [Populus trichocarpa] gi|222866912|gb|EEF04043.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224133288|ref|XP_002328006.1| predicted protein [Populus trichocarpa] gi|222837415|gb|EEE75794.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|225425908|ref|XP_002271612.1| PREDICTED: vinorine synthase-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|297814832|ref|XP_002875299.1| transferase family protein [Arabidopsis lyrata subsp. lyrata] gi|297321137|gb|EFH51558.1| transferase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|15230978|ref|NP_189233.1| HXXXD-type acyl-transferase-like protein [Arabidopsis thaliana] gi|332643586|gb|AEE77107.1| HXXXD-type acyl-transferase-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|9279609|dbj|BAB01067.1| acetyltranferase-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|255540345|ref|XP_002511237.1| Anthranilate N-benzoyltransferase protein, putative [Ricinus communis] gi|223550352|gb|EEF51839.1| Anthranilate N-benzoyltransferase protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 329 | ||||||
| TAIR|locus:2092090 | 442 | AT3G26040 [Arabidopsis thalian | 0.939 | 0.699 | 0.348 | 2.7e-45 | |
| TAIR|locus:2102936 | 443 | AT3G30280 [Arabidopsis thalian | 0.872 | 0.647 | 0.326 | 4.4e-36 | |
| TAIR|locus:2130065 | 446 | AT4G15390 [Arabidopsis thalian | 0.866 | 0.639 | 0.332 | 1.9e-35 | |
| TAIR|locus:2024036 | 435 | AT1G24430 [Arabidopsis thalian | 0.936 | 0.708 | 0.306 | 3.1e-35 | |
| TAIR|locus:2024061 | 436 | AT1G24420 [Arabidopsis thalian | 0.860 | 0.649 | 0.321 | 7.7e-32 | |
| TAIR|locus:2152783 | 426 | AT5G47950 [Arabidopsis thalian | 0.765 | 0.591 | 0.315 | 4.4e-29 | |
| TAIR|locus:2178667 | 428 | AT5G23970 [Arabidopsis thalian | 0.848 | 0.651 | 0.273 | 2.5e-25 | |
| TAIR|locus:2152763 | 443 | AT5G47980 [Arabidopsis thalian | 0.848 | 0.629 | 0.291 | 2.3e-24 | |
| TAIR|locus:2130075 | 435 | BIA1 "BRASSINOSTEROID INACTIVA | 0.841 | 0.636 | 0.281 | 7.5e-24 | |
| TAIR|locus:2160549 | 426 | FACT "FATTY ALCOHOL:CAFFEOYL-C | 0.696 | 0.537 | 0.286 | 3.9e-15 |
| TAIR|locus:2092090 AT3G26040 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 115/330 (34%), Positives = 181/330 (54%)
Query: 4 VQIISTEAIKPSSPTPKHLRTYELSMLDQMFSNLYMPFVFFYSANKHQDFRKNSDFLKQS 63
V ++S + IKPSSPTP HL+ ++LS+L+Q+ ++ P VFFYSAN + LK+S
Sbjct: 3 VDVVSRDIIKPSSPTPNHLKKFKLSLLEQLGPTIFGPMVFFYSANNSIKPTEQLQMLKKS 62
Query: 64 LAKTLTHYYPLAGRFVDSFSVECNDHGVTFIEAQVGCDMSKFLQPPNMGVMQQLIPPSPQ 123
L++TLTH+YPLAGR + S++CND G F+EA+V +S L P+ +QQLIP S
Sbjct: 63 LSETLTHFYPLAGRLKGNISIDCNDSGADFLEARVNSPLSNLLLEPSSDSLQQLIPTSVD 122
Query: 124 XXXXXXXXXXXXXVQVNYFSTGDVAIGICIWHGLADGSAISNFMKLWAEIN-RGVNENIC 182
Q ++F G ++IG+CI H LAD ++I FMK WA I+ RG + I
Sbjct: 123 SIETRTRLLLA---QASFFECGSMSIGVCISHKLADATSIGLFMKSWAAISSRGSIKTI- 178
Query: 183 NNVVLDCTSLFPPHSSLKDQH---IKPQLT-SKVVFKRLFFDGKKIVALKEKVNKEIMVG 238
V D +FPP + + ++P++ ++ + KR FD I AL+ K +
Sbjct: 179 GAPVFDTVKIFPPGNFSETSPAPVVEPEIMMNQTLSKRFIFDSSSIQALQAKAS------ 232
Query: 239 SFDHELQASRFMVVSSLIWGAFIAVAQERKRAINNKLYSHAMYYTMNLRSKMNPPMIPQC 298
SF+ Q +R VS+LIW + A + R ++ + +++LRS+++PP
Sbjct: 233 SFEVN-QPTRVEAVSALIWKS----AMKATRTVSGTSKPSILANSVSLRSRVSPPFTKNS 287
Query: 299 MGNIFRFVRAEWPLVGDDDIEATSLVKKGR 328
+GN+ + A+ G + + +LV K R
Sbjct: 288 IGNLVSYFAAKAE-EGINQTKLQTLVSKIR 316
|
|
| TAIR|locus:2102936 AT3G30280 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2130065 AT4G15390 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2024036 AT1G24430 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2024061 AT1G24420 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2152783 AT5G47950 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2178667 AT5G23970 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2152763 AT5G47980 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2130075 BIA1 "BRASSINOSTEROID INACTIVATOR1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2160549 FACT "FATTY ALCOHOL:CAFFEOYL-CoA CAFFEOYL TRANSFERASE" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 329 | |||
| PLN00140 | 444 | PLN00140, PLN00140, alcohol acetyltransferase fami | 3e-60 | |
| pfam02458 | 432 | pfam02458, Transferase, Transferase family | 4e-53 | |
| PLN02481 | 436 | PLN02481, PLN02481, Omega-hydroxypalmitate O-ferul | 3e-30 | |
| PLN03157 | 447 | PLN03157, PLN03157, spermidine hydroxycinnamoyl tr | 8e-23 | |
| PLN02663 | 431 | PLN02663, PLN02663, hydroxycinnamoyl-CoA:shikimate | 4e-19 |
| >gnl|CDD|165708 PLN00140, PLN00140, alcohol acetyltransferase family protein; Provisional | Back alignment and domain information |
|---|
Score = 198 bits (506), Expect = 3e-60
Identities = 100/310 (32%), Positives = 157/310 (50%), Gaps = 22/310 (7%)
Query: 3 DVQIISTEAIKPSSPTPKHLRTYELSMLDQMFSNLYMPFVFFYSANKHQDFRK--NSDFL 60
+V IIS E IKPSSP+ HL+ ++LS+LDQ+ Y+P +FFY N +Q+F+ S L
Sbjct: 2 EVSIISRELIKPSSPSIHHLKPFKLSLLDQLTPTTYIPMIFFYPTNNNQNFKGLQISIQL 61
Query: 61 KQSLAKTLTHYYPLAGRFVDSFSVECNDHGVTFIEAQVGCDMSKFLQPPNMGVMQQLIPP 120
K+SL++TL+ +YP +GR D+ ++ + GV F E +V +S FL+ P + ++ + +P
Sbjct: 62 KRSLSETLSTFYPFSGRVKDNLIIDNYEEGVPFFETRVKGSLSDFLKHPQLELLNKFLPC 121
Query: 121 SPQSLRLEASERALLAVQVNYFSTGDVAIGICIWHGLADGSAISNFMKLWAEINRGVNEN 180
P S + +A+QVN F G +A+G+C H + D + S F+ WA RG
Sbjct: 122 QPFSYESDPEAIPQVAIQVNTFDCGGIALGLCFSHKIIDAATASAFLDSWAANTRGHYSE 181
Query: 181 ICNNVVLDCTSLFPPHSSLKDQHIKPQLTSKVVF-------KRLFFDGKKIVALKEKVNK 233
+ N + + +S FPP +S Q L + F KR FD K I L+ K
Sbjct: 182 VINPDLFEASSFFPPLNSFPVQF--LLLMEENWFFKENYITKRFVFDAKAIATLRAKAKS 239
Query: 234 EIMVGSFDHELQASRFMVVSSLIWGAFIAVAQERKRAINNKLYSHAMYYTMNLRSKMNPP 293
+ SR +S IW A + R+I+ + +N+R + PP
Sbjct: 240 K-------RVPNPSRIETLSCFIWKCCTAAS----RSISAAPRPSISVHAVNIRQRTKPP 288
Query: 294 MIPQCMGNIF 303
M +GN+F
Sbjct: 289 MSRYSIGNLF 298
|
Length = 444 |
| >gnl|CDD|217048 pfam02458, Transferase, Transferase family | Back alignment and domain information |
|---|
| >gnl|CDD|215266 PLN02481, PLN02481, Omega-hydroxypalmitate O-feruloyl transferase | Back alignment and domain information |
|---|
| >gnl|CDD|178702 PLN03157, PLN03157, spermidine hydroxycinnamoyl transferase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|166304 PLN02663, PLN02663, hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 329 | |||
| PLN00140 | 444 | alcohol acetyltransferase family protein; Provisio | 100.0 | |
| PLN03157 | 447 | spermidine hydroxycinnamoyl transferase; Provision | 100.0 | |
| PLN02481 | 436 | Omega-hydroxypalmitate O-feruloyl transferase | 100.0 | |
| PLN02663 | 431 | hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinn | 100.0 | |
| PF02458 | 432 | Transferase: Transferase family; InterPro: IPR0034 | 100.0 | |
| PRK09294 | 416 | acyltransferase PapA5; Provisional | 99.26 | |
| COG4908 | 439 | Uncharacterized protein containing a NRPS condensa | 98.65 | |
| TIGR02946 | 446 | acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT. This b | 98.38 | |
| PF07247 | 480 | AATase: Alcohol acetyltransferase; InterPro: IPR01 | 98.31 | |
| PF00668 | 301 | Condensation: Condensation domain; InterPro: IPR00 | 98.31 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 97.26 | |
| PRK12467 | 3956 | peptide synthase; Provisional | 97.2 | |
| PRK12316 | 5163 | peptide synthase; Provisional | 97.18 | |
| PRK12467 | 3956 | peptide synthase; Provisional | 97.1 | |
| PRK12316 | 5163 | peptide synthase; Provisional | 96.87 | |
| PRK05691 | 4334 | peptide synthase; Validated | 96.75 | |
| PRK05691 | 4334 | peptide synthase; Validated | 96.54 | |
| PF03007 | 263 | WES_acyltransf: Wax ester synthase-like Acyl-CoA a | 96.0 | |
| PF07428 | 413 | Tri3: 15-O-acetyltransferase Tri3; InterPro: IPR00 | 87.28 |
| >PLN00140 alcohol acetyltransferase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-63 Score=477.16 Aligned_cols=315 Identities=33% Similarity=0.554 Sum_probs=261.5
Q ss_pred CcEEEEeeeEEeCCCCCCCCCceeccCcCccccccccccEEEEecCCCCCC--cccchHHHHHHHHHhhhhhccCCceec
Q 039469 2 DDVQIISTEAIKPSSPTPKHLRTYELSMLDQMFSNLYMPFVFFYSANKHQD--FRKNSDFLKQSLAKTLTHYYPLAGRFV 79 (329)
Q Consensus 2 ~~v~i~s~~~v~p~~p~~~~~~~~~Ls~lD~~~~~~~~~~~~~f~~~~~~~--~~~~~~~L~~sL~~~L~~~p~LaGrl~ 79 (329)
|+|+|+|+++|+|+.|||.|.+.++||.|||..++.|++.+|||+.+...+ ....+++||+||+++|++|||||||++
T Consensus 1 ~~v~~~s~~~V~Ps~ptp~~~~~~~LS~lD~~~~~~~~~~~~fY~~~~~~~~~~~~~~~~Lk~sLs~~L~~fyplAGRl~ 80 (444)
T PLN00140 1 MEVSIISRELIKPSSPSIHHLKPFKLSLLDQLTPTTYIPMIFFYPTNNNQNFKGLQISIQLKRSLSETLSTFYPFSGRVK 80 (444)
T ss_pred CeeEEeccceeccCCCCccccccCCCChHHhcccccccceEEEeeCCCcccccchhHHHHHHHHHHHHHhhhhccCcccc
Confidence 689999999999999999988899999999988899999999999865322 235679999999999999999999999
Q ss_pred CcceEEecCCCcEEEEEeecCChhhccCCCCccccccccCCCCCCCCccccccceeEEEEEEecCCcEEEEEeeeccccc
Q 039469 80 DSFSVECNDHGVTFIEAQVGCDMSKFLQPPNMGVMQQLIPPSPQSLRLEASERALLAVQVNYFSTGDVAIGICIWHGLAD 159 (329)
Q Consensus 80 ~~~~i~~~~~gv~f~~a~~~~~l~~l~~~p~~~~~~~l~p~~~~~~~~~~~~~Pll~vQvt~f~~gG~~l~~~~~H~v~D 159 (329)
.+++|+||++||.|+||+++++++|+...++...+++|+|..+........+.|++++|||+|+|||++||+++||.++|
T Consensus 81 ~~~~i~cn~~Gv~fveA~~~~~l~d~l~~~~~~~~~~l~p~~~~~~~~~~~~~Pll~vQvT~F~cGG~~lG~~~~H~v~D 160 (444)
T PLN00140 81 DNLIIDNYEEGVPFFETRVKGSLSDFLKHPQLELLNKFLPCQPFSYESDPEAIPQVAIQVNTFDCGGIALGLCFSHKIID 160 (444)
T ss_pred CCceeEccCCCceEEEEEecCcHHHhcCCCCHHHHHhhCCCCcccccCCccCCceEEEEEEEeccCcEEEEeeeceEccc
Confidence 88999999999999999999999998765554456778876532100112347999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHhcCCCCCccCCCccCCC-cccCCCCCCCCC-----CCCCCCCCCeEEEEEEeCHHHHHHHHHHhhh
Q 039469 160 GSAISNFMKLWAEINRGVNENICNNVVLDCT-SLFPPHSSLKDQ-----HIKPQLTSKVVFKRLFFDGKKIVALKEKVNK 233 (329)
Q Consensus 160 g~g~~~fl~~wa~~~rg~~~~~~~~P~~dr~-~l~~~~~~p~~~-----~~~~~~~~~~~~~~f~~~~~~l~~Lk~~a~~ 233 (329)
|.|+.+||++||++|||...+.. .|.+||. .+.|+.+.+... +..+....++..++|+|++++|++||+++.+
T Consensus 161 g~s~~~Fl~~WA~~~rg~~~~~~-~P~~dr~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~~f~fs~~~I~~LK~~~~~ 239 (444)
T PLN00140 161 AATASAFLDSWAANTRGHYSEVI-NPDLFEASSFFPPLNSFPVQFLLLMEENWFFKENYITKRFVFDAKAIATLRAKAKS 239 (444)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCC-CcccccccccCCCCCcccccccccccccccccCceEEEEEEECHHHHHHHHHhccc
Confidence 99999999999999999764456 7999986 345544221111 1122234578899999999999999999874
Q ss_pred hhccCCCCCCCCCceeeehhHHHHHHHHHHhhcccccccccccceeEEEEeeCcccCCCCCCcCCcccceeeeeeeecCC
Q 039469 234 EIMVGSFDHELQASRFMVVSSLIWGAFIAVAQERKRAINNKLYSHAMYYTMNLRSKMNPPMIPQCMGNIFRFVRAEWPLV 313 (329)
Q Consensus 234 ~l~~~~~~~~~~~St~d~l~A~~W~~~~~ar~~~~~~~~~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~v~~~~~~~~~~ 313 (329)
. ...++|++|+|+|++|+|++||+....+..+++. +.++||+|+|++||+|++|+||++..+.+..+++
T Consensus 240 ~-------~~~~~S~~e~vsA~iWr~~~rA~~~~~~~~~~~~----~~~~vn~R~Rl~PpLP~~y~GN~i~~~~~~~~~~ 308 (444)
T PLN00140 240 K-------RVPNPSRIETLSCFIWKCCTAASRSISAAPRPSI----SVHAVNIRQRTKPPMSRYSIGNLFWWALAAADPA 308 (444)
T ss_pred c-------cCCCCchhHHHHHHHHHHHHHHhhhccCCCCceE----EEEEEeccccCCCCCCcccccchhhhheeccccc
Confidence 3 2357999999999999999999653222235778 9999999999999999999999999999998888
Q ss_pred CCCCcchHHHHhhccC
Q 039469 314 GDDDIEATSLVKKGRV 329 (329)
Q Consensus 314 dl~~~~l~~~a~~iR~ 329 (329)
|+ +.+|+++|..||+
T Consensus 309 ~~-~~~l~~~a~~Ir~ 323 (444)
T PLN00140 309 DT-KIELNELVSLTRE 323 (444)
T ss_pred cc-ccchHHHHHHHHH
Confidence 87 5899999999985
|
|
| >PLN03157 spermidine hydroxycinnamoyl transferase; Provisional | Back alignment and domain information |
|---|
| >PLN02481 Omega-hydroxypalmitate O-feruloyl transferase | Back alignment and domain information |
|---|
| >PLN02663 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase | Back alignment and domain information |
|---|
| >PF02458 Transferase: Transferase family; InterPro: IPR003480 This family includes a number of transferase enzymes | Back alignment and domain information |
|---|
| >PRK09294 acyltransferase PapA5; Provisional | Back alignment and domain information |
|---|
| >COG4908 Uncharacterized protein containing a NRPS condensation (elongation) domain [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR02946 acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT | Back alignment and domain information |
|---|
| >PF07247 AATase: Alcohol acetyltransferase; InterPro: IPR010828 This family contains a number of alcohol acetyltransferase (2 | Back alignment and domain information |
|---|
| >PF00668 Condensation: Condensation domain; InterPro: IPR001242 This domain is found in many multi-domain enzymes which synthesize peptide antibiotics | Back alignment and domain information |
|---|
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
| >PRK12467 peptide synthase; Provisional | Back alignment and domain information |
|---|
| >PRK12316 peptide synthase; Provisional | Back alignment and domain information |
|---|
| >PRK12467 peptide synthase; Provisional | Back alignment and domain information |
|---|
| >PRK12316 peptide synthase; Provisional | Back alignment and domain information |
|---|
| >PRK05691 peptide synthase; Validated | Back alignment and domain information |
|---|
| >PRK05691 peptide synthase; Validated | Back alignment and domain information |
|---|
| >PF03007 WES_acyltransf: Wax ester synthase-like Acyl-CoA acyltransferase domain; InterPro: IPR004255 This entry represents the N terminus (approximately 170 residues) of a number of hypothetical plant proteins | Back alignment and domain information |
|---|
| >PF07428 Tri3: 15-O-acetyltransferase Tri3; InterPro: IPR009992 This family represents a conserved region approximately 400 residues long within 15-O-acetyltransferase (Tri3), which seems to be restricted to ascomycete fungi | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 329 | ||||
| 2bgh_A | 421 | Crystal Structure Of Vinorine Synthase Length = 421 | 1e-41 | ||
| 4g0b_A | 436 | Structure Of Native Hct From Coffea Canephora Lengt | 3e-15 | ||
| 4g2m_A | 439 | Structure Of A Lys-Hct Mutant From Coffea Canephora | 3e-15 | ||
| 4g22_A | 439 | Structure Of A Lys-Hct Mutant From Coffea Canephora | 3e-15 | ||
| 2e1t_A | 454 | Crystal Structure Of Dendranthema Morifolium Dmat C | 4e-07 | ||
| 2e1v_A | 454 | Crystal Structure Of Dendranthema Morifolium Dmat, | 4e-06 | ||
| 2xr7_A | 453 | Crystal Structure Of Nicotiana Tabacum Malonyltrans | 5e-04 |
| >pdb|2BGH|A Chain A, Crystal Structure Of Vinorine Synthase Length = 421 | Back alignment and structure |
|
| >pdb|4G0B|A Chain A, Structure Of Native Hct From Coffea Canephora Length = 436 | Back alignment and structure |
| >pdb|4G2M|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora (Crystal Form 2) Length = 439 | Back alignment and structure |
| >pdb|4G22|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora (Crystal Form 1) Length = 439 | Back alignment and structure |
| >pdb|2E1T|A Chain A, Crystal Structure Of Dendranthema Morifolium Dmat Complexed With Malonyl-coa Length = 454 | Back alignment and structure |
| >pdb|2E1V|A Chain A, Crystal Structure Of Dendranthema Morifolium Dmat, Seleno- Methionine Derivative Length = 454 | Back alignment and structure |
| >pdb|2XR7|A Chain A, Crystal Structure Of Nicotiana Tabacum Malonyltransferase (Ntmat1) Complexed With Malonyl-Coa Length = 453 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 329 | |||
| 2bgh_A | 421 | Vinorine synthase; VS, BAHD, acetyltransferase, au | 4e-80 | |
| 4g22_A | 439 | Hydroxycinnamoyl-COA shikimate/quinate hydroxycinn | 1e-75 | |
| 2xr7_A | 453 | Malonyltransferase; xenobiotics, naphthols; HET: M | 3e-64 | |
| 2e1v_A | 454 | Acyl transferase; BAHD superfamily, seleno-methion | 3e-61 | |
| 2rkv_A | 451 | Trichothecene 3-O-acetyltransferase; BAHD superfam | 2e-38 |
| >2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina} Length = 421 | Back alignment and structure |
|---|
Score = 249 bits (637), Expect = 4e-80
Identities = 109/330 (33%), Positives = 167/330 (50%), Gaps = 20/330 (6%)
Query: 4 VQIISTEAIKPSSPTPKHLRTYELSMLDQMFSNLYMPFVFFYSAN--KHQDFRKNSDFLK 61
++ +S E I PSSPTP+ L+ Y++S LDQ+ ++PF+ FY + D + S LK
Sbjct: 5 MEKVSEELILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDSNLDPAQTSQHLK 64
Query: 62 QSLAKTLTHYYPLAGRFVDSFSVECNDHGVTFIEAQVGCDMSKFLQ-PPNMGVMQQLIPP 120
QSL+K LTH+YPLAGR + SV+CND GV F+EA+V +S+ +Q + + Q +P
Sbjct: 65 QSLSKVLTHFYPLAGRINVNSSVDCNDSGVPFVEARVQAQLSQAIQNVVELEKLDQYLPS 124
Query: 121 SPQS-LRLEASERALLAVQVNYFSTGDVAIGICIWHGLADGSAISNFMKLWAEINRGVNE 179
+ ++E +E LAV++++F G AIG+ + H +AD +++ F+ W RG E
Sbjct: 125 AAYPGGKIEVNEDVPLAVKISFFECGGTAIGVNLSHKIADVLSLATFLNAWTATCRGETE 184
Query: 180 NICNNVVLDCTSL-FPPHSSLKDQHIKPQLTSKVVFKRLFFDGKKIVALKEKVNKEIMVG 238
+ D + FPP + + P VV KR FD +KI AL+ + +
Sbjct: 185 IVL--PNFDLAARHFPPVDNTPSPELVPD--ENVVMKRFVFDKEKIGALRAQASSA---- 236
Query: 239 SFDHELQASRFMVVSSLIWGAFIAVAQERKRAINNKLYSHAMYYTMNLRSKMNPPMIPQC 298
E SR +V + IW I K NK + +NLRS+MNPP+
Sbjct: 237 --SEEKNFSRVQLVVAYIWKHVID-VTRAKYGAKNKFV---VVQAVNLRSRMNPPLPHYA 290
Query: 299 MGNIFRFVRAEWPLVGDDDI-EATSLVKKG 327
MGNI + A D D + ++
Sbjct: 291 MGNIATLLFAAVDAEWDKDFPDLIGPLRTS 320
|
| >4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A Length = 439 | Back alignment and structure |
|---|
| >2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum} Length = 453 | Back alignment and structure |
|---|
| >2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A Length = 454 | Back alignment and structure |
|---|
| >2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A* Length = 451 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 329 | |||
| 4g22_A | 439 | Hydroxycinnamoyl-COA shikimate/quinate hydroxycinn | 100.0 | |
| 2bgh_A | 421 | Vinorine synthase; VS, BAHD, acetyltransferase, au | 100.0 | |
| 2xr7_A | 453 | Malonyltransferase; xenobiotics, naphthols; HET: M | 100.0 | |
| 2e1v_A | 454 | Acyl transferase; BAHD superfamily, seleno-methion | 100.0 | |
| 2rkv_A | 451 | Trichothecene 3-O-acetyltransferase; BAHD superfam | 100.0 | |
| 1q9j_A | 422 | PAPA5, polyketide synthase associated protein 5; c | 99.0 | |
| 1l5a_A | 436 | Amide synthase, VIBH; nonribosomal peptide synthet | 98.52 | |
| 2jgp_A | 520 | Tyrocidine synthetase 3; multifunctional enzyme, a | 98.52 | |
| 4hvm_A | 493 | Tlmii; PSI-biology, midwest center for structural | 98.41 | |
| 2xhg_A | 466 | Tyrocidine synthetase A; isomerase, nonribosomal p | 98.36 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 97.99 | |
| 3fot_A | 519 | 15-O-acetyltransferase; fusarium head blight, tric | 97.28 |
| >4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-63 Score=479.20 Aligned_cols=308 Identities=23% Similarity=0.350 Sum_probs=259.5
Q ss_pred CcEEEEeeeEEeCCCCCCCCCceeccCcCccccccccccEEEEecCCCCCCcccchHHHHHHHHHhhhhhccCCceec--
Q 039469 2 DDVQIISTEAIKPSSPTPKHLRTYELSMLDQMFSNLYMPFVFFYSANKHQDFRKNSDFLKQSLAKTLTHYYPLAGRFV-- 79 (329)
Q Consensus 2 ~~v~i~s~~~v~p~~p~~~~~~~~~Ls~lD~~~~~~~~~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~-- 79 (329)
|+|+|+++++|+|+.|+|. +.++||+||+..++.|++.+|||+.++. +....+++||+||+++|++||||||||+
T Consensus 6 ~~V~i~~~~~V~P~~~tp~--~~~~LS~lD~~~~~~~~~~~~~y~~~~~-~~~~~~~~Lk~sLs~~L~~f~plAGRl~~~ 82 (439)
T 4g22_A 6 MKIEVKESTMVRPAQETPG--RNLWNSNVDLVVPNFHTPSVYFYRPTGS-SNFFDAKVLKDALSRALVPFYPMAGRLKRD 82 (439)
T ss_dssp CCEEEEEEEEECCSSCCCC--CEECCCHHHHSCCTTCCCEEEEECCCSC-TTTTCHHHHHHHHHHHTTTTGGGGCEEEEC
T ss_pred eEEEEeeeEEEeCCCCCCC--CeecCChhHhCccccceeeEEEEcCCCC-ccccHHHHHHHHHHHHHhhccccceeeeeC
Confidence 6799999999999999976 5799999999988899999999997543 2345689999999999999999999997
Q ss_pred --CcceEEecCCCcEEEEEeecCChhhccCCCCccccccccCCCCCCCCccccccceeEEEEEEecCCcEEEEEeeeccc
Q 039469 80 --DSFSVECNDHGVTFIEAQVGCDMSKFLQPPNMGVMQQLIPPSPQSLRLEASERALLAVQVNYFSTGDVAIGICIWHGL 157 (329)
Q Consensus 80 --~~~~i~~~~~gv~f~~a~~~~~l~~l~~~p~~~~~~~l~p~~~~~~~~~~~~~Pll~vQvt~f~~gG~~l~~~~~H~v 157 (329)
++++|+||++||.|++|+++++++|+.+..+...+++|+|..+.. ....+.|++.+|||+|+|||++||+++||.+
T Consensus 83 ~~g~~~i~c~~~Gv~fv~A~~d~~l~~l~~~~p~~~~~~l~p~~~~~--~~~~~~pll~vQvT~f~cGG~~lg~~~~H~v 160 (439)
T 4g22_A 83 EDGRIEIECNGEGVLFVEAESDGVVDDFGDFAPTLELRRLIPAVDYS--QGISSYALLVLQVTYFKCGGVSLGVGMRHHA 160 (439)
T ss_dssp TTSCEEEECCCCCEEEEEEEESSCGGGGTTCCCCGGGGGGSCCCCTT--SCTTSSCSEEEEEEECTTSCEEEEEEECTTT
T ss_pred CCCCEEEEECCCCCEEEEEEcCCcHHHhcCCCCCHHHHhcCCCCCcc--cccccCceeEEEEEEecCCCEEEEEEeeecc
Confidence 479999999999999999999999997633333567888865431 2234689999999999999999999999999
Q ss_pred cchhhHHHHHHHHHHHhcCCCCCccCCCccCCCcccCCCCCCC-------CCCCC---------CCCC-CCeEEEEEEeC
Q 039469 158 ADGSAISNFMKLWAEINRGVNENICNNVVLDCTSLFPPHSSLK-------DQHIK---------PQLT-SKVVFKRLFFD 220 (329)
Q Consensus 158 ~Dg~g~~~fl~~wa~~~rg~~~~~~~~P~~dr~~l~~~~~~p~-------~~~~~---------~~~~-~~~~~~~f~~~ 220 (329)
+||.|+.+|+++||++|||... .. .|++||+.+.+ +++|. +.+.. +... .++.+++|+|+
T Consensus 161 ~Dg~~~~~Fl~~wa~~~rg~~~-~~-~P~~dr~~l~~-~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fs 237 (439)
T 4g22_A 161 ADGFSGLHFINSWSDMARGLDV-TL-PPFIDRTLLRA-RDPPQPQFQHIEYQPPPALAVSPQTAASDSVPETAVSIFKLT 237 (439)
T ss_dssp CCHHHHHHHHHHHHHHHTTCCC-SS-CCBCCGGGGCC-CSSCCCSSCCGGGSCCC---------------CEEEEEEEEC
T ss_pred CcHHHHHHHHHHHHHHhCCCCC-CC-CCccccccccC-CCCCCCCcCcccccCCCCCcccccccccCCcccceEEEEEEC
Confidence 9999999999999999999764 45 79999986642 22221 11110 0112 56899999999
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCCceeeehhHHHHHHHHHHhhcccccccccccceeEEEEeeCcccCCCCCCcCCcc
Q 039469 221 GKKIVALKEKVNKEIMVGSFDHELQASRFMVVSSLIWGAFIAVAQERKRAINNKLYSHAMYYTMNLRSKMNPPMIPQCMG 300 (329)
Q Consensus 221 ~~~l~~Lk~~a~~~l~~~~~~~~~~~St~d~l~A~~W~~~~~ar~~~~~~~~~~~~~~~l~~~vd~R~rl~p~lp~~Y~G 300 (329)
+++|++||+++.+.. +..++|+||+|+||+|+|+++||...++ +++. +.++||+|+|++||+|++|+|
T Consensus 238 ~~~i~~LK~~a~~~~------~~~~~St~dal~A~iWr~~~rAr~~~~~--~~~~----l~~~vd~R~rl~Pplp~~Y~G 305 (439)
T 4g22_A 238 REQISALKAKSKEDG------NTISYSSYEMLAGHVWRCACKARGLEVD--QGTK----LYIATDGRARLRPSLPPGYFG 305 (439)
T ss_dssp HHHHHHHHHGGGGGG------CCCCCCHHHHHHHHHHHHHHHHTTCCTT--CEEE----EEEEEECTTTSSSCCCTTBCS
T ss_pred HHHHHHHHHHhhccC------CCCCccHHHHHHHHHHHHHHHhcCCCCC--CcEE----EEEEEcccCCCCCCCCCCccc
Confidence 999999999997642 2467999999999999999999986543 6788 999999999999999999999
Q ss_pred cceeeeeeeecCCCCCCcchHHHHhhccC
Q 039469 301 NIFRFVRAEWPLVGDDDIEATSLVKKGRV 329 (329)
Q Consensus 301 N~v~~~~~~~~~~dl~~~~l~~~a~~iR~ 329 (329)
|++..+.+.++++||.+.+|+++|.+||+
T Consensus 306 N~v~~~~~~~~~~el~~~~L~~~A~~Ir~ 334 (439)
T 4g22_A 306 NVIFTATPIAIAGDLEFKPVWYAASKIHD 334 (439)
T ss_dssp CCEEEECCEEEHHHHHHSCHHHHHHHHHH
T ss_pred ceeehhhcceEHHHHhhCcHHHHHHHHHH
Confidence 99999999999999988999999999985
|
| >2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina} | Back alignment and structure |
|---|
| >2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum} | Back alignment and structure |
|---|
| >2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A | Back alignment and structure |
|---|
| >2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A* | Back alignment and structure |
|---|
| >1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2 | Back alignment and structure |
|---|
| >1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2 | Back alignment and structure |
|---|
| >2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis} | Back alignment and structure |
|---|
| >4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus} | Back alignment and structure |
|---|
| >2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis} | Back alignment and structure |
|---|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
| >3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 329 | |||
| d1q9ja1 | 175 | Polyketide synthase associated protein 5, PapA5 {M | 97.64 | |
| d1l5aa1 | 174 | VibH {Vibrio cholerae [TaxId: 666]} | 97.45 | |
| d1q9ja2 | 238 | Polyketide synthase associated protein 5, PapA5 {M | 96.83 |
| >d1q9ja1 c.43.1.2 (A:1-175) Polyketide synthase associated protein 5, PapA5 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-dependent acyltransferases superfamily: CoA-dependent acyltransferases family: NRPS condensation domain (amide synthase) domain: Polyketide synthase associated protein 5, PapA5 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.64 E-value=0.00011 Score=58.75 Aligned_cols=132 Identities=14% Similarity=0.053 Sum_probs=73.1
Q ss_pred eccCcCccccc--cccccEEEEecCCCCCCcccchHHHHHHHHHhhhhhccCCceec-C--cceEEecCCCcEEEEEeec
Q 039469 25 YELSMLDQMFS--NLYMPFVFFYSANKHQDFRKNSDFLKQSLAKTLTHYYPLAGRFV-D--SFSVECNDHGVTFIEAQVG 99 (329)
Q Consensus 25 ~~Ls~lD~~~~--~~~~~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~-~--~~~i~~~~~gv~f~~a~~~ 99 (329)
-+|+..++... ..++...+-++.. .+.+.|++++..++..+|.|..+++ + +......++......
T Consensus 8 r~l~~~e~~~~~~~~~~~~~~~l~g~------ld~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~~~~~~~~~~~~~---- 77 (175)
T d1q9ja1 8 RKLSHSEEVFAQYEVFTSMTIQLRGV------IDVDALSDAFDALLETHPVLASHLEQSSDGGWNLVADDLLHSGI---- 77 (175)
T ss_dssp EECCHHHHHHHHTTCEEEEEEEEESC------CCHHHHHHHHHHHHHHCGGGSEEEEECTTSSEEEEECCSSSCCC----
T ss_pred HHhCHHhhhcccCceEEEEEEEEcCC------CCHHHHHHHHHHHHHhchhheEEEEEeCCeeEEEEECCCCCccE----
Confidence 35777777654 2444444444433 5699999999999999999988876 1 211111111100000
Q ss_pred CChhhccCCCCccccccccCCCCCCCCccccccceeEEEEEEecCCcEEEEEeeeccccchhhHHHHHHHHHHHhc
Q 039469 100 CDMSKFLQPPNMGVMQQLIPPSPQSLRLEASERALLAVQVNYFSTGDVAIGICIWHGLADGSAISNFMKLWAEINR 175 (329)
Q Consensus 100 ~~l~~l~~~p~~~~~~~l~p~~~~~~~~~~~~~Pll~vQvt~f~~gG~~l~~~~~H~v~Dg~g~~~fl~~wa~~~r 175 (329)
...+..... ......-.+. .-..+.|+..+.+..- +++..+.+.+||.++||.|+..|++.+.+...
T Consensus 78 -~~~d~~~~~-~~~~~~~~~~------~l~~~~~l~~~~i~~~-~~~~~l~l~~HH~i~Dg~S~~~ll~el~~~Y~ 144 (175)
T d1q9ja1 78 -CVIDGTAAT-NGSPSGNAEL------RLDQSVSLLHLQLILR-EGGAELTLYLHHCMADGHHGAVLVDELFSRYT 144 (175)
T ss_dssp -EEEC-------------CCC------CCCTTTCSEEEEEECC-SSSCEEEEEEEGGGCCHHHHHHHHHHHHHHHH
T ss_pred -EEEEcccch-hHHHHhhccc------CccCCCCeEEEEEEec-CCeEEEEEEccccccCHhHHHHHHHHHHHHHH
Confidence 000110000 0000000011 1112356665555433 47888889999999999999999998876553
|
| >d1l5aa1 c.43.1.2 (A:1-174) VibH {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
| >d1q9ja2 c.43.1.2 (A:181-418) Polyketide synthase associated protein 5, PapA5 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|