Citrus Sinensis ID: 039483
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
No hits with e-value below 0.001 by BLAST
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 360 | ||||||
| 255585399 | 575 | ankyrin repeat-containing protein, putat | 0.627 | 0.393 | 0.343 | 2e-27 | |
| 255551947 | 582 | ankyrin repeat-containing protein, putat | 0.880 | 0.544 | 0.263 | 2e-25 | |
| 224127079 | 394 | predicted protein [Populus trichocarpa] | 0.797 | 0.728 | 0.292 | 3e-24 | |
| 224127106 | 575 | predicted protein [Populus trichocarpa] | 0.8 | 0.500 | 0.281 | 8e-24 | |
| 224127098 | 399 | predicted protein [Populus trichocarpa] | 0.619 | 0.558 | 0.294 | 5e-22 | |
| 224127093 | 281 | predicted protein [Populus trichocarpa] | 0.619 | 0.793 | 0.299 | 7e-22 | |
| 224127104 | 405 | predicted protein [Populus trichocarpa] | 0.619 | 0.550 | 0.294 | 8e-22 | |
| 224145572 | 395 | predicted protein [Populus trichocarpa] | 0.716 | 0.653 | 0.283 | 7e-21 | |
| 224107373 | 391 | predicted protein [Populus trichocarpa] | 0.580 | 0.534 | 0.319 | 1e-19 | |
| 298205151 | 1006 | unnamed protein product [Vitis vinifera] | 0.697 | 0.249 | 0.293 | 2e-18 |
| >gi|255585399|ref|XP_002533395.1| ankyrin repeat-containing protein, putative [Ricinus communis] gi|223526769|gb|EEF28995.1| ankyrin repeat-containing protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 140/285 (49%), Gaps = 59/285 (20%)
Query: 28 NLFKVAAAGNLEPFKDMA-------REVIESLLTARSRTQSCISTSNCRRQ-KMCQPV-- 77
+L+K A G ++PFK+ A + +++L + S STS + MC +
Sbjct: 30 DLYKAAEDGKIDPFKNFAGPLDLLVTPIKDTILHLNLASPSERSTSFVKEALDMCPQILL 89
Query: 78 --TAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHT 135
A GDT H+AA++ H DIV +LIE + QH+D LES A RQM+RMTNK K T
Sbjct: 90 QINADGDTL-LHIAARYGHLDIVKLLIEHTR-AQHQD--LESAGEAVRQMLRMTNKSKET 145
Query: 136 TLHEA-------------------------YNKIPLCMAAEYEHSSHTVVAILKSCTSVS 170
LHEA + + PL +A+E H VV +LK+CTS++
Sbjct: 146 ALHEAARNDHPDLVELLIEQDPDFVHSSNDFGETPLYLASERGHLE-VVVIMLKACTSLA 204
Query: 171 HIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYA 230
+ P + ALHAA MH + V + + K S++ D+ WTP+HYA
Sbjct: 205 Y---GGPNGKTALHAAAMH----------RHGGIVHAILDKKTSLVNKADEMGWTPLHYA 251
Query: 231 AYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQNNM 275
AY ++K +L D+ A ADK R+ TALHL CQ N+
Sbjct: 252 AYIGASRVVKQLLGYDKYVAYAADKARRRTALHLA----ACQANI 292
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255551947|ref|XP_002517018.1| ankyrin repeat-containing protein, putative [Ricinus communis] gi|223543653|gb|EEF45181.1| ankyrin repeat-containing protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 119/452 (26%), Positives = 196/452 (43%), Gaps = 135/452 (29%)
Query: 25 IDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQ---------KMCQ 75
+D L+K A N+ K A++ ++ +T + T I ++ ++ ++C
Sbjct: 51 MDAELYKAAVEENINSLKKYAKD-LDLQVTPKKNTILHIHLNSPNKRSVDFVKEALQLCP 109
Query: 76 PVTAKGDTRSR---HVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKE 132
+ K ++ H+AA++ H DIV +L+E+AK ++E+LE+G GA +QM +M N++
Sbjct: 110 SLLWKNNSNGDAPLHIAARYGHIDIVKLLLEQAKA---QNEDLETGRGAMKQMWQMQNEK 166
Query: 133 KHTTLHEA-------------------------YNKIPLCMAAEYEHSSHTVVAILKSCT 167
K LHEA Y + PL +AA + + V+ IL +C
Sbjct: 167 KDMALHEAARNNHLSVVRLLTRLDPHFLYPANDYEETPLYLAAARGYL-YVVIEILNTCK 225
Query: 168 SVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPI 227
SV++ P + ALH A + N V ++ + +K + ++ WTP+
Sbjct: 226 SVAY---GGPKGKTALHGAVLS----------GNRGIVLEILKREKRLTIEAEENGWTPL 272
Query: 228 HYAAYHRN-----YLILKLILKIDRTAAKIADKDRKMTALHLV--------------HGP 268
HYAAY + Y+I++ +L+ D++AA + DKDRK TALHL P
Sbjct: 273 HYAAYGNDQNFGAYVIVQRLLECDKSAAYVVDKDRKRTALHLAACRGNVRIMKEIISKCP 332
Query: 269 KGCQ------NNML-----------------ASSLMD---EGDAKGNTTVHFFA------ 296
C+ N+L SSL+D + DA+GNT +H A
Sbjct: 333 DCCEIADDRGWNVLHYAVVSKNDEALQVILRNSSLIDLVNDRDAQGNTPLHLLAVSRPYL 392
Query: 297 ------------AVHRKEIF--DDL---------------SGRVKATMRPSTSKIENGAA 327
A +++ + DDL + R + G A
Sbjct: 393 PSFVFDGEDDLNAFYKQNVLSRDDLIHELLQPKYQQKRQXXFTLPGGYRSDENDPRQGTA 452
Query: 328 ILRGNTAFQAFMVTYTIAMILSLLLSLFTFIV 359
IL ++AF+AF++T TIAM+LS FIV
Sbjct: 453 ILSKSSAFEAFIITDTIAMVLSTCSVFIHFIV 484
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224127079|ref|XP_002329386.1| predicted protein [Populus trichocarpa] gi|224127100|ref|XP_002329395.1| predicted protein [Populus trichocarpa] gi|222870436|gb|EEF07567.1| predicted protein [Populus trichocarpa] gi|222870445|gb|EEF07576.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 168/362 (46%), Gaps = 75/362 (20%)
Query: 25 IDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRT--------QSCISTSNCRRQKM--- 73
+DP LFK A AGN+ PF++ + + LLTA T QS S K
Sbjct: 1 MDPVLFKAAEAGNIGPFENY-QTSLNQLLTADENTILHVYLKNQSSEPESTDFVDKFLER 59
Query: 74 CQPVTAKGDTRSR---HVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTN 130
C P+ + + R H+AA+ H ++V VLI+RAK + + E SGV ++ M+RMTN
Sbjct: 60 CPPLLFQANKRGETPLHLAARNGHSNVVKVLIDRAKALPADPE---SGVTKAKMMLRMTN 116
Query: 131 KEKHTTLHEA-------------------------YNKIPLCMAAEY------EHSSHTV 159
+E+ T LHEA + + PL +AA E V
Sbjct: 117 EEQDTALHEAARNRRSHVVEILTKEDPEFSYPANVHGETPLYIAASIGFLMFSEEHGKVV 176
Query: 160 VAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGI 219
IL +C SV + P R ALHAA+M +N +++ E +K + K
Sbjct: 177 DGILGNCISVDY---GGPDGRTALHAASM----------AANYETARKMLEKEKKLTKTT 223
Query: 220 DQCWWTPIHYAAY--HRNYLILKLILKIDRTAAKIADKDRKMTALHL--VHGPKGCQNNM 275
D+ W+P+HYA+Y N I++++L+ D +AA IA+ ++K TALH+ + G +
Sbjct: 224 DENGWSPLHYASYCDWSNAPIVEVLLEYDASAASIAETEKKRTALHIAAIQGHVDAMKEI 283
Query: 276 LA--SSLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGRVKATMRPSTSKIENGAAILRGNT 333
++ + D D +G +H+ A ++F + ++ R T K + +GNT
Sbjct: 284 VSRCPACCDLVDNRGWNALHYAVASKDTKVFKECL-KIPELARLQTEKDD------KGNT 336
Query: 334 AF 335
F
Sbjct: 337 PF 338
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224127106|ref|XP_002329398.1| predicted protein [Populus trichocarpa] gi|222870448|gb|EEF07579.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 164/362 (45%), Gaps = 74/362 (20%)
Query: 25 IDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRT--------QSCISTSNCRRQKM--- 73
+DP LFK A AGN+ PF++ + LLT T QS S K
Sbjct: 1 MDPVLFKAAEAGNIGPFENYQTCSLNQLLTPDENTILHVYLKNQSSEPESTDFVDKFLER 60
Query: 74 CQPVTAKGDTRSR---HVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTN 130
C P+ + + R H+ A++ H ++V VLI+RAK + + E SGV ++ M+RMTN
Sbjct: 61 CPPLLFQANKRGETPLHLEARYGHSNVVKVLIDRAKALPADPE---SGVTKAKMMLRMTN 117
Query: 131 KEKHTTLHEA-------------------------YNKIPLCMAAEY------EHSSHTV 159
+E+ T LHEA + + PL +A E V
Sbjct: 118 EEQDTALHEAARNRRSHVVEILTKEDPEFSYPANVHGETPLYIAVSIGFLMFSEEHGKVV 177
Query: 160 VAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGI 219
IL +C SV + P R ALHAA+M +N +++ E +K + K
Sbjct: 178 DGILGNCISVDY---GGPDGRTALHAASM----------AANYETARKMLEKEKKLTKTT 224
Query: 220 DQCWWTPIHYAAY--HRNYLILKLILKIDRTAAKIADKDRKMTALHL--VHGPKGCQNNM 275
D+ W+P+HYA+Y N I++++L+ D + A IA+ ++K TALH+ + G +
Sbjct: 225 DENGWSPLHYASYCDWSNAPIVEVLLEYDASTASIAETEKKRTALHIAAIQGHVDAMKEI 284
Query: 276 LA--SSLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGRVKATMRPSTSKIENGAAILRGNT 333
++ + D D +G +H+ A ++F + ++ R T K + +GNT
Sbjct: 285 VSRCPACCDLVDNRGWNALHYAVASKDTKVFKECL-KIPELARLQTEKDD------KGNT 337
Query: 334 AF 335
F
Sbjct: 338 PF 339
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224127098|ref|XP_002329394.1| predicted protein [Populus trichocarpa] gi|222870444|gb|EEF07575.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 141/285 (49%), Gaps = 62/285 (21%)
Query: 25 IDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQ-----------KM 73
+DP LFK AA G+++PF+ + ++ LLT T + N R+ +M
Sbjct: 7 MDPVLFKAAAEGDIDPFEKY-QTCLDQLLTPDENTILHVYLGNQSREPELTDFVVIILEM 65
Query: 74 CQPVTAKGDTRSR---HVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTN 130
C P+ + + + H+AA + H ++V VLI+RAK + + E SGV +++M+RMTN
Sbjct: 66 CPPLLFQANKKGEIPLHLAAAYGHSNVVKVLIDRAKALPTDSE---SGVTEAKKMLRMTN 122
Query: 131 KEKHTTLHEA-------------------------YNKIPLCMAAEY-----EHSSHTVV 160
+E+ T LHEA + + PL +AA E V
Sbjct: 123 EEQDTALHEAARHRRSHVVEILTKEDPEFPYSANVHGETPLYIAASIITRWREEGGKVVD 182
Query: 161 AILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGID 220
IL +C SV + P R AL+AA + +D ++L E +K + + D
Sbjct: 183 GILGNCISVDY---GGPNGRTALNAAIW----------VRDDETARKLLEKEKKLTQTTD 229
Query: 221 QCWWTPIHYAA-YHRNYLILKLILKIDRTAAKIADKDRKMTALHL 264
+ W+P+H+AA Y + I++++L+ D +AA IA+ +++ TALH+
Sbjct: 230 ENGWSPLHHAACYDWSPRIVQVLLENDASAAYIAETEKRRTALHI 274
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224127093|ref|XP_002329392.1| predicted protein [Populus trichocarpa] gi|222870442|gb|EEF07573.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 140/284 (49%), Gaps = 61/284 (21%)
Query: 25 IDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQ-----------KM 73
+DP LFK A AG++ PF++ + ++ LLT T + N R+ +M
Sbjct: 5 MDPVLFKAAEAGDIGPFENY-QTCLDQLLTPDENTILHVYLGNQSREPEFTDFVDKILEM 63
Query: 74 CQPVTAKGDTRSR---HVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTN 130
C P+ + + + H+AA++ H ++V VLIERA+ + + E SGV +++M+RMTN
Sbjct: 64 CPPLLLQANKKGEIPLHLAARYGHSNVVGVLIERAEALPTDPE---SGVSEAKKMLRMTN 120
Query: 131 KEKHTTLHEA-------------------------YNKIPLCMAAEY--EHSSHTVVAIL 163
E+ T LHEA + + PL +AA + + IL
Sbjct: 121 DEQDTALHEAARNMRSHVVEILTEEDPEFSYSANVHGETPLYIAASSWGQEQEKVIDEIL 180
Query: 164 KSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCW 223
+C SV + P R LHAA+ + + ++L + +K + K D
Sbjct: 181 ANCISVDY---GGPNGRTVLHAAS----------AVGDYETARKLLKKEKKLTKTTDDNG 227
Query: 224 WTPIHYAAYHRNYL---ILKLILKIDRTAAKIADKDRKMTALHL 264
W+P+HYAAY +L ++K++LK D +AA IA+ ++K TALH+
Sbjct: 228 WSPLHYAAYFSTWLNISVVKVLLKYDASAAYIAETEKKRTALHI 271
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224127104|ref|XP_002329397.1| predicted protein [Populus trichocarpa] gi|222870447|gb|EEF07578.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 141/285 (49%), Gaps = 62/285 (21%)
Query: 25 IDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQ-----------KM 73
+DP LFK AA G+++PF+ + ++ LLT T + N R+ +M
Sbjct: 13 MDPVLFKAAAEGDIDPFEKY-QTCLDQLLTPDENTILHVYLGNQSREPELTDFVVIILEM 71
Query: 74 CQPVTAKGDTRSR---HVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTN 130
C P+ + + + H+AA + H ++V VLI+RAK + + E SGV +++M+RMTN
Sbjct: 72 CPPLLFQANKKGEIPLHLAAAYGHSNVVKVLIDRAKALPTDSE---SGVTEAKKMLRMTN 128
Query: 131 KEKHTTLHEA-------------------------YNKIPLCMAAEY-----EHSSHTVV 160
+E+ T LHEA + + PL +AA E V
Sbjct: 129 EEQDTALHEAARHRRSHVVEILTKEDPEFPYSANVHGETPLYIAASIITRWREERGKVVD 188
Query: 161 AILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGID 220
IL +C SV + P R AL+AA + +D ++L E +K + + D
Sbjct: 189 GILGNCISVDY---GGPNGRTALNAAIW----------VRDDETARKLLEKEKKLTQTTD 235
Query: 221 QCWWTPIHYAA-YHRNYLILKLILKIDRTAAKIADKDRKMTALHL 264
+ W+P+H+AA Y + I++++L+ D +AA IA+ +++ TALH+
Sbjct: 236 ENGWSPLHHAACYDWSPRIVQVLLENDASAAYIAETEKRRTALHI 280
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224145572|ref|XP_002325691.1| predicted protein [Populus trichocarpa] gi|222862566|gb|EEF00073.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 154/335 (45%), Gaps = 77/335 (22%)
Query: 25 IDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQK-----------M 73
++P L+K A AGN+ PFKD + LLT + T + N R+ M
Sbjct: 1 MEPKLYKAAEAGNINPFKDRLPTSLNELLTPKKNTILHVYLENQRKGSKSTDFVGQIIDM 60
Query: 74 CQPVTAKGDTRSR---HVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTN 130
C P+ + + + H AA++ ++V VLI+RAK +LESGV +++M+RMTN
Sbjct: 61 CPPLLLQANKKGEIPLHFAARYGRSNVVRVLIDRAKA---RPTDLESGVTEAKKMLRMTN 117
Query: 131 KEKHTTLHEAYNKI-------------------------PLCMAAEY----------EHS 155
+EK T LH A I PL +AA E+
Sbjct: 118 EEKDTALHVAARNIQAQVVEILTKEDPEFSYSTNVHGETPLYIAANLRFNWRFKRHEENR 177
Query: 156 SHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSM 215
+ IL +C SV + R ALHAA M+ D H + +++ E S+
Sbjct: 178 KKVINEILSNCKSVEYC---GSHGRTALHAAGMYGD-----HETT-----RKILERDASL 224
Query: 216 IKGIDQCWWTPIHYAAYHRNYL----ILKLILKIDRTAAKIADKDRKMTALHLVHGPKGC 271
+ D W+P+HYA + R+++ ++++L+ D +AA I D +++ TALHL +G
Sbjct: 225 TRRTDDDGWSPLHYAVFFRDFVHSVSTVEVLLEHDVSAAYIVDSEKR-TALHLA-ASRGT 282
Query: 272 QNNMLA-----SSLMDEGDAKGNTTVHFFAAVHRK 301
+A + + D++G +H +AA+ RK
Sbjct: 283 WAAAIAIMNTCPASCELVDSRGWNALH-YAAITRK 316
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224107373|ref|XP_002333525.1| predicted protein [Populus trichocarpa] gi|222837132|gb|EEE75511.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 133/269 (49%), Gaps = 60/269 (22%)
Query: 25 IDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTR 84
+DP LFKVA AGN+ PF++ + ++ LLT T I +N KG+
Sbjct: 1 MDPVLFKVAEAGNIGPFEN-CQTCLDQLLTPDENT---ILHAN-----------KKGEI- 44
Query: 85 SRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEA---- 140
H+AA++ H ++V VLI+ AK + + E SGV +++M+RMTN+E+ T LHEA
Sbjct: 45 PLHLAARYGHSNVVKVLIDCAKALPTDPE---SGVTEAKKMLRMTNEEQDTALHEAARNS 101
Query: 141 ---------------------YNKIPLCMAAEYE---HSSHTVVAILKSCTSVSHIYMKA 176
+ PL +AA + IL +C SV Y
Sbjct: 102 RGHVVEILTKEDPEFSYSANVLGETPLYIAAASRKCLERKKVIDEILTNCISVD--YGAG 159
Query: 177 PMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAA-YHRN 235
P R ALHAA DL ++L E +K + + D+ W+P+HYAA Y +
Sbjct: 160 PNGRTALHAAVRVRDL----------ETARKLLEKEKKLTQTTDENGWSPLHYAACYDWS 209
Query: 236 YLILKLILKIDRTAAKIADKDRKMTALHL 264
I++++L+ D +AA IA+ +++ TALH+
Sbjct: 210 PRIVQVLLENDASAAYIAETEKRRTALHI 238
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|298205151|emb|CBI17210.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 150/337 (44%), Gaps = 86/337 (25%)
Query: 15 DNNG-ETSQPQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRT----QSCISTSNCR 69
D +G +T P +D +++K AA G++E K + + LT + T S + C
Sbjct: 459 DGDGSQTDIPVMDDSVYKAAAKGDIEVLKKIPESQFHAQLTPKHNTILHIASEFGQTECV 518
Query: 70 RQKMCQPVTA--------KGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGA 121
+ + P + GDT H+AA+ H +V L+E ++E+GVG
Sbjct: 519 KWILTLPACSSLLQCPNLNGDT-VLHLAAREGHLKVVEALLEPTL-------DIETGVGE 570
Query: 122 SRQM-IRMTNKEKHTTLHEAY-------------------------NKIPLCMAAEYEHS 155
++M I MTNK K+T LHEA PL MAAE +
Sbjct: 571 DKEMLIGMTNKGKNTALHEAVRFNHSDVVESLIEKDPRFNYRANDSGTTPLYMAAERGLT 630
Query: 156 SHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSM 215
V+ I KS TS S+ M R ALHAA LC +N+ ++ E K +
Sbjct: 631 GLVVLIIDKSSTSPSY---HGLMGRTALHAAV----LC------NNEAMTNKILEWKPDL 677
Query: 216 IKGIDQCWWTPIHYAAYHRNYL-ILKLIL-KIDRTAAKIADKDRKMTALH---------- 263
K +D+ W+P+HYAA L I++L+L K +++ A + KD K TALH
Sbjct: 678 TKEVDKNGWSPLHYAAERGCDLKIVELLLSKSEKSVAYLRSKDGKKTALHIASFHHHTKI 737
Query: 264 ----LVHGPKGCQNNMLASSLMDEGDAKGNTTVHFFA 296
L H P GC+ ++ +A+GNT +H +
Sbjct: 738 VEEILSHSP-GCR---------EQKNAQGNTPIHLLS 764
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
No hits with e-value below 0.001 by BLAST
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 360 | |||
| cd00204 | 126 | cd00204, ANK, ankyrin repeats; ankyrin repeats med | 0.002 | |
| cd00204 | 126 | cd00204, ANK, ankyrin repeats; ankyrin repeats med | 0.003 |
| >gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins | Back alignment and domain information |
|---|
Score = 37.4 bits (87), Expect = 0.002
Identities = 32/157 (20%), Positives = 60/157 (38%), Gaps = 42/157 (26%)
Query: 87 HVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPL 146
H+AA H ++V +L+E GA + + + T LH
Sbjct: 12 HLAASNGHLEVVKLLLEN---------------GAD---VNAKDNDGRTPLH-------- 45
Query: 147 CMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQ 206
+AA+ H +V +L + + + LH A + + D V+
Sbjct: 46 -LAAKNGHLE--IVKLL--LEKGADVNARDKDGNTPLHLA------ARNGNL---DV-VK 90
Query: 207 QLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLIL 243
L + + + D+ TP+H AA + + ++KL+L
Sbjct: 91 LLLK-HGADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126
|
The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126 |
| >gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins | Back alignment and domain information |
|---|
Score = 37.0 bits (86), Expect = 0.003
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Query: 219 IDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRK-MTALHL 264
D+ TP+H AA + + ++KL+L+ A + KD T LHL
Sbjct: 3 RDEDGRTPLHLAASNGHLEVVKLLLENG---ADVNAKDNDGRTPLHL 46
|
The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 360 | |||
| PHA02876 | 682 | ankyrin repeat protein; Provisional | 100.0 | |
| PHA02874 | 434 | ankyrin repeat protein; Provisional | 100.0 | |
| KOG4412 | 226 | consensus 26S proteasome regulatory complex, subun | 100.0 | |
| PHA03100 | 480 | ankyrin repeat protein; Provisional | 100.0 | |
| PHA03095 | 471 | ankyrin-like protein; Provisional | 100.0 | |
| PHA02946 | 446 | ankyin-like protein; Provisional | 100.0 | |
| PHA02874 | 434 | ankyrin repeat protein; Provisional | 100.0 | |
| KOG0510 | 929 | consensus Ankyrin repeat protein [General function | 100.0 | |
| PHA02791 | 284 | ankyrin-like protein; Provisional | 100.0 | |
| PHA02716 | 764 | CPXV016; CPX019; EVM010; Provisional | 100.0 | |
| PHA02875 | 413 | ankyrin repeat protein; Provisional | 100.0 | |
| PHA02946 | 446 | ankyin-like protein; Provisional | 100.0 | |
| PHA02878 | 477 | ankyrin repeat protein; Provisional | 100.0 | |
| KOG0509 | 600 | consensus Ankyrin repeat and DHHC-type Zn-finger d | 100.0 | |
| PHA02876 | 682 | ankyrin repeat protein; Provisional | 100.0 | |
| PHA02791 | 284 | ankyrin-like protein; Provisional | 100.0 | |
| PHA03095 | 471 | ankyrin-like protein; Provisional | 99.98 | |
| PHA02878 | 477 | ankyrin repeat protein; Provisional | 99.97 | |
| KOG4412 | 226 | consensus 26S proteasome regulatory complex, subun | 99.97 | |
| KOG0510 | 929 | consensus Ankyrin repeat protein [General function | 99.97 | |
| PHA03100 | 480 | ankyrin repeat protein; Provisional | 99.97 | |
| PHA02875 | 413 | ankyrin repeat protein; Provisional | 99.97 | |
| PHA02989 | 494 | ankyrin repeat protein; Provisional | 99.97 | |
| PHA02798 | 489 | ankyrin-like protein; Provisional | 99.96 | |
| PHA02716 | 764 | CPXV016; CPX019; EVM010; Provisional | 99.96 | |
| PHA02989 | 494 | ankyrin repeat protein; Provisional | 99.96 | |
| PHA02859 | 209 | ankyrin repeat protein; Provisional | 99.96 | |
| PHA02730 | 672 | ankyrin-like protein; Provisional | 99.95 | |
| KOG4177 | 1143 | consensus Ankyrin [Cell wall/membrane/envelope bio | 99.95 | |
| KOG0509 | 600 | consensus Ankyrin repeat and DHHC-type Zn-finger d | 99.95 | |
| PHA02730 | 672 | ankyrin-like protein; Provisional | 99.95 | |
| PHA02859 | 209 | ankyrin repeat protein; Provisional | 99.95 | |
| KOG0508 | 615 | consensus Ankyrin repeat protein [General function | 99.94 | |
| PHA02917 | 661 | ankyrin-like protein; Provisional | 99.94 | |
| PHA02798 | 489 | ankyrin-like protein; Provisional | 99.94 | |
| KOG4177 | 1143 | consensus Ankyrin [Cell wall/membrane/envelope bio | 99.94 | |
| PHA02792 | 631 | ankyrin-like protein; Provisional | 99.93 | |
| PHA02917 | 661 | ankyrin-like protein; Provisional | 99.93 | |
| KOG0508 | 615 | consensus Ankyrin repeat protein [General function | 99.93 | |
| PHA02792 | 631 | ankyrin-like protein; Provisional | 99.92 | |
| PHA02795 | 437 | ankyrin-like protein; Provisional | 99.92 | |
| PLN03192 | 823 | Voltage-dependent potassium channel; Provisional | 99.91 | |
| PHA02795 | 437 | ankyrin-like protein; Provisional | 99.91 | |
| TIGR00870 | 743 | trp transient-receptor-potential calcium channel p | 99.9 | |
| PLN03192 | 823 | Voltage-dependent potassium channel; Provisional | 99.89 | |
| KOG0502 | 296 | consensus Integral membrane ankyrin-repeat protein | 99.88 | |
| KOG0507 | 854 | consensus CASK-interacting adaptor protein (caskin | 99.87 | |
| KOG0505 | 527 | consensus Myosin phosphatase, regulatory subunit [ | 99.85 | |
| KOG0502 | 296 | consensus Integral membrane ankyrin-repeat protein | 99.84 | |
| PHA02743 | 166 | Viral ankyrin protein; Provisional | 99.84 | |
| PHA02741 | 169 | hypothetical protein; Provisional | 99.83 | |
| PHA02884 | 300 | ankyrin repeat protein; Provisional | 99.82 | |
| PHA02736 | 154 | Viral ankyrin protein; Provisional | 99.81 | |
| KOG0507 | 854 | consensus CASK-interacting adaptor protein (caskin | 99.81 | |
| PHA02884 | 300 | ankyrin repeat protein; Provisional | 99.81 | |
| TIGR00870 | 743 | trp transient-receptor-potential calcium channel p | 99.8 | |
| KOG0514 | 452 | consensus Ankyrin repeat protein [General function | 99.8 | |
| KOG0514 | 452 | consensus Ankyrin repeat protein [General function | 99.8 | |
| KOG0512 | 228 | consensus Fetal globin-inducing factor (contains a | 99.79 | |
| PHA02741 | 169 | hypothetical protein; Provisional | 99.79 | |
| KOG0505 | 527 | consensus Myosin phosphatase, regulatory subunit [ | 99.78 | |
| PHA02743 | 166 | Viral ankyrin protein; Provisional | 99.78 | |
| KOG4369 | 2131 | consensus RTK signaling protein MASK/UNC-44 [Signa | 99.76 | |
| PHA02736 | 154 | Viral ankyrin protein; Provisional | 99.76 | |
| KOG0512 | 228 | consensus Fetal globin-inducing factor (contains a | 99.75 | |
| KOG4369 | 2131 | consensus RTK signaling protein MASK/UNC-44 [Signa | 99.72 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.68 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.68 | |
| cd00204 | 126 | ANK ankyrin repeats; ankyrin repeats mediate prote | 99.67 | |
| PF12796 | 89 | Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02 | 99.64 | |
| KOG3676 | 782 | consensus Ca2+-permeable cation channel OSM-9 and | 99.64 | |
| KOG3676 | 782 | consensus Ca2+-permeable cation channel OSM-9 and | 99.6 | |
| PF12796 | 89 | Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02 | 99.59 | |
| cd00204 | 126 | ANK ankyrin repeats; ankyrin repeats mediate prote | 99.59 | |
| KOG4214 | 117 | consensus Myotrophin and similar proteins [Transcr | 99.5 | |
| KOG4214 | 117 | consensus Myotrophin and similar proteins [Transcr | 99.46 | |
| COG0666 | 235 | Arp FOG: Ankyrin repeat [General function predicti | 99.46 | |
| PF13857 | 56 | Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A | 99.38 | |
| COG0666 | 235 | Arp FOG: Ankyrin repeat [General function predicti | 99.37 | |
| KOG1710 | 396 | consensus MYND Zn-finger and ankyrin repeat protei | 99.34 | |
| PTZ00322 | 664 | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatas | 99.31 | |
| PF13857 | 56 | Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A | 99.28 | |
| PF13637 | 54 | Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A | 99.27 | |
| KOG0515 | 752 | consensus p53-interacting protein 53BP/ASPP, conta | 99.25 | |
| PF13637 | 54 | Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A | 99.23 | |
| PTZ00322 | 664 | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatas | 99.23 | |
| KOG1710 | 396 | consensus MYND Zn-finger and ankyrin repeat protei | 99.22 | |
| KOG0515 | 752 | consensus p53-interacting protein 53BP/ASPP, conta | 99.17 | |
| KOG0818 | 669 | consensus GTPase-activating proteins of the GIT fa | 98.76 | |
| PF13606 | 30 | Ank_3: Ankyrin repeat | 98.74 | |
| KOG0782 | 1004 | consensus Predicted diacylglycerol kinase [Signal | 98.68 | |
| PF13606 | 30 | Ank_3: Ankyrin repeat | 98.6 | |
| KOG0818 | 669 | consensus GTPase-activating proteins of the GIT fa | 98.58 | |
| PF00023 | 33 | Ank: Ankyrin repeat Hereditary spherocytosis; Inte | 98.56 | |
| KOG0783 | 1267 | consensus Uncharacterized conserved protein, conta | 98.55 | |
| KOG0783 | 1267 | consensus Uncharacterized conserved protein, conta | 98.53 | |
| PF00023 | 33 | Ank: Ankyrin repeat Hereditary spherocytosis; Inte | 98.52 | |
| KOG0506 | 622 | consensus Glutaminase (contains ankyrin repeat) [A | 98.5 | |
| KOG0506 | 622 | consensus Glutaminase (contains ankyrin repeat) [A | 98.46 | |
| KOG0782 | 1004 | consensus Predicted diacylglycerol kinase [Signal | 98.41 | |
| KOG0522 | 560 | consensus Ankyrin repeat protein [General function | 98.2 | |
| KOG0522 | 560 | consensus Ankyrin repeat protein [General function | 98.16 | |
| KOG0705 | 749 | consensus GTPase-activating protein Centaurin gamm | 98.07 | |
| KOG0705 | 749 | consensus GTPase-activating protein Centaurin gamm | 98.01 | |
| KOG3609 | 822 | consensus Receptor-activated Ca2+-permeable cation | 97.9 | |
| KOG0520 | 975 | consensus Uncharacterized conserved protein, conta | 97.87 | |
| KOG0511 | 516 | consensus Ankyrin repeat protein [General function | 97.8 | |
| KOG0521 | 785 | consensus Putative GTPase activating proteins (GAP | 97.59 | |
| KOG3609 | 822 | consensus Receptor-activated Ca2+-permeable cation | 97.59 | |
| KOG0521 | 785 | consensus Putative GTPase activating proteins (GAP | 97.52 | |
| PF13962 | 113 | PGG: Domain of unknown function | 97.42 | |
| KOG0511 | 516 | consensus Ankyrin repeat protein [General function | 97.34 | |
| KOG2384 | 223 | consensus Major histocompatibility complex protein | 97.32 | |
| KOG0520 | 975 | consensus Uncharacterized conserved protein, conta | 97.31 | |
| KOG2384 | 223 | consensus Major histocompatibility complex protein | 97.11 | |
| smart00248 | 30 | ANK ankyrin repeats. Ankyrin repeats are about 33 | 96.8 | |
| smart00248 | 30 | ANK ankyrin repeats. Ankyrin repeats are about 33 | 96.42 | |
| KOG2505 | 591 | consensus Ankyrin repeat protein [General function | 95.65 | |
| KOG2505 | 591 | consensus Ankyrin repeat protein [General function | 95.63 | |
| PF03158 | 192 | DUF249: Multigene family 530 protein; InterPro: IP | 91.39 | |
| PF11929 | 76 | DUF3447: Domain of unknown function (DUF3447); Int | 88.87 | |
| PF06128 | 284 | Shigella_OspC: Shigella flexneri OspC protein; Int | 88.5 | |
| PF06128 | 284 | Shigella_OspC: Shigella flexneri OspC protein; Int | 87.65 |
| >PHA02876 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=293.74 Aligned_cols=228 Identities=19% Similarity=0.192 Sum_probs=199.2
Q ss_pred ccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchh---------hHHH----------
Q 039483 65 TSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGA---------SRQM---------- 125 (360)
Q Consensus 65 l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~---------~~~~---------- 125 (360)
|... +.++ +.+|..|.|| ||+||..|+.++|++|+++|++++..+..+.++.+. .+.+
T Consensus 164 Ll~~-Gadv-n~~d~~G~Tp-Lh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~~ 240 (682)
T PHA02876 164 LLEG-GADV-NAKDIYCITP-IHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNIDTIKAIIDNRSNINKN 240 (682)
T ss_pred HHhC-CCCC-CCCCCCCCCH-HHHHHHCCCHHHHHHHHHCCCCcCccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCC
Confidence 5667 8899 9999999999 999999999999999999999999877776665322 1111
Q ss_pred -------------------------hhcccCCCCchHHHhhh-------------------------cCHHHHHHhcCCc
Q 039483 126 -------------------------IRMTNKEKHTTLHEAYN-------------------------KIPLCMAAEYEHS 155 (360)
Q Consensus 126 -------------------------l~~~d~~g~t~Lh~a~~-------------------------~t~L~~A~~~g~~ 155 (360)
++..|..|.||||+|+. .||||+|+..|..
T Consensus 241 ~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~ 320 (682)
T PHA02876 241 DLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYD 320 (682)
T ss_pred cHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCC
Confidence 44567789999999992 7999999999933
Q ss_pred HHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcC-CcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcC
Q 039483 156 SHTVVAILKSCTSVSHIYMKAPMERQALHAATMHI-DLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHR 234 (360)
Q Consensus 156 ~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~-~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~ 234 (360)
.++++.|+..|++++. +|..|.||||+|+..+ +. ++++.|++.+ .+++.+|..|+||||+|+..|
T Consensus 321 ~~~v~~Ll~~gadin~---~d~~g~TpLh~A~~~~~~~----------~iv~lLl~~g-adin~~d~~G~TpLh~Aa~~~ 386 (682)
T PHA02876 321 TENIRTLIMLGADVNA---ADRLYITPLHQASTLDRNK----------DIVITLLELG-ANVNARDYCDKTPIHYAAVRN 386 (682)
T ss_pred HHHHHHHHHcCCCCCC---cccCCCcHHHHHHHhCCcH----------HHHHHHHHcC-CCCccCCCCCCCHHHHHHHcC
Confidence 8999999999999999 9999999999999864 56 8889999888 889999999999999999999
Q ss_pred CHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc--ccccc--cccCccCCCCCCcHHHHHHHcC-CHHHHHHHhh
Q 039483 235 NYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ--NNMLA--SSLMDEGDAKGNTTVHFFAAVH-RKEIFDDLSG 309 (360)
Q Consensus 235 ~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~--~~~L~--~~~~~~~d~~g~Tpl~~A~~~~-~~~i~~~l~~ 309 (360)
+.+++++|+++|+++ +..+. .|.||||+|+..++.. ++.|+ +++++.+|..|+||||+|++.+ +.++++.|+.
T Consensus 387 ~~~iv~~Ll~~gad~-~~~~~-~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~ 464 (682)
T PHA02876 387 NVVIINTLLDYGADI-EALSQ-KIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLD 464 (682)
T ss_pred CHHHHHHHHHCCCCc-cccCC-CCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHHHHHHH
Confidence 999999999999999 99998 9999999998766654 77777 4999999999999999999876 6899999988
Q ss_pred hh
Q 039483 310 RV 311 (360)
Q Consensus 310 ~~ 311 (360)
..
T Consensus 465 ~G 466 (682)
T PHA02876 465 NG 466 (682)
T ss_pred CC
Confidence 64
|
|
| >PHA02874 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-34 Score=275.36 Aligned_cols=261 Identities=16% Similarity=0.188 Sum_probs=154.9
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHhhh--hcccCCc----------ccccc-ccccccccccCCCCCCCCChHHHHHHhcC
Q 039483 27 PNLFKVAAAGNLEPFKDMAREVIESL--LTARSRT----------QSCIS-TSNCRRQKMCQPVTAKGDTRSRHVAAKFD 93 (360)
Q Consensus 27 ~~L~~Aa~~G~~~~~~~ll~~~~~~~--~~~~~~t----------~~~v~-l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g 93 (360)
..|+.|+.+|+++.++.|++.+.... .+..+.| .++++ |... +.++ +..+..|.|| ||.|+..|
T Consensus 3 ~~l~~ai~~gd~~~v~~ll~~~~~~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~-Ga~~-n~~~~~~~t~-L~~A~~~~ 79 (434)
T PHA02874 3 QDLRMCIYSGDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKH-GADI-NHINTKIPHP-LLTAIKIG 79 (434)
T ss_pred HHHHHHHhcCCHHHHHHHHHcCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCC-CCCCCCCCCH-HHHHHHcC
Confidence 46888999999999999987321110 1223333 56666 6666 7777 7777778888 88888888
Q ss_pred CHHHHHHHHHhccccCcccccccccchhhHHH------hhcccCCCCchHHHhh-h-----------------------c
Q 039483 94 HCDIVSVLIERAKLVQHEDEELESGVGASRQM------IRMTNKEKHTTLHEAY-N-----------------------K 143 (360)
Q Consensus 94 ~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~------l~~~d~~g~t~Lh~a~-~-----------------------~ 143 (360)
+.+++++|+++|+++........ ..+.++.+ ++..|..|.||||+|+ + .
T Consensus 80 ~~~iv~~Ll~~g~~~~~~~~~~~-~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~ 158 (434)
T PHA02874 80 AHDIIKLLIDNGVDTSILPIPCI-EKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGC 158 (434)
T ss_pred CHHHHHHHHHCCCCCCcchhccC-CHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCC
Confidence 88888888887776543211110 11222222 4556777876666665 1 4
Q ss_pred CHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCC
Q 039483 144 IPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCW 223 (360)
Q Consensus 144 t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g 223 (360)
||||+|+..|+ .+++++|+++|++++. .+..|.||||+|+..|+. +++++|++.+ .+++..+..|
T Consensus 159 tpLh~A~~~~~-~~iv~~Ll~~g~~~n~---~~~~g~tpL~~A~~~g~~----------~iv~~Ll~~g-~~i~~~~~~g 223 (434)
T PHA02874 159 YPIHIAIKHNF-FDIIKLLLEKGAYANV---KDNNGESPLHNAAEYGDY----------ACIKLLIDHG-NHIMNKCKNG 223 (434)
T ss_pred CHHHHHHHCCc-HHHHHHHHHCCCCCCC---CCCCCCCHHHHHHHcCCH----------HHHHHHHhCC-CCCcCCCCCC
Confidence 56666666666 6666666666665555 555666666666666666 6666666655 4455555566
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhhhcCC-ccc-ccccc--cccCccCCCCCCcHHHHHHHcC
Q 039483 224 WTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPK-GCQ-NNMLA--SSLMDEGDAKGNTTVHFFAAVH 299 (360)
Q Consensus 224 ~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~-~~~-~~~L~--~~~~~~~d~~g~Tpl~~A~~~~ 299 (360)
.||||.|+..+. ..+++|+ .|+++ +.+|. .|+||||+|+..+ +.+ +++|+ +++++.+|..|+||||+|++.+
T Consensus 224 ~TpL~~A~~~~~-~~i~~Ll-~~~~i-n~~d~-~G~TpLh~A~~~~~~~~iv~~Ll~~gad~n~~d~~g~TpL~~A~~~~ 299 (434)
T PHA02874 224 FTPLHNAIIHNR-SAIELLI-NNASI-NDQDI-DGSTPLHHAINPPCDIDIIDILLYHKADISIKDNKGENPIDTAFKYI 299 (434)
T ss_pred CCHHHHHHHCCh-HHHHHHH-cCCCC-CCcCC-CCCCHHHHHHhcCCcHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHhC
Confidence 666666665543 3334433 35555 55665 6666666666544 233 55555 3666666666666666666555
Q ss_pred -CHHHHHHHhhh
Q 039483 300 -RKEIFDDLSGR 310 (360)
Q Consensus 300 -~~~i~~~l~~~ 310 (360)
..++++.|...
T Consensus 300 ~~~~~ik~ll~~ 311 (434)
T PHA02874 300 NKDPVIKDIIAN 311 (434)
T ss_pred CccHHHHHHHHh
Confidence 44455555543
|
|
| >KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-35 Score=235.02 Aligned_cols=202 Identities=20% Similarity=0.207 Sum_probs=177.9
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCC-CCCCChHHHHHHhcCCHHHHHHHHH-h
Q 039483 27 PNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVT-AKGDTRSRHVAAKFDHCDIVSVLIE-R 104 (360)
Q Consensus 27 ~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~-~~g~tp~Lh~A~~~g~~~~v~~Ll~-~ 104 (360)
++.+.+++......++.+++..+++ + +.++ .+|+|| ||+||..|+.+++.+|++ -
T Consensus 5 ~~~~~~~~~~~~~kveel~~s~~kS---------------------L-~~r~dqD~Rt~-LHwa~S~g~~eiv~fLlsq~ 61 (226)
T KOG4412|consen 5 SLGKAICENCEEFKVEELIQSDPKS---------------------L-NARDDQDGRTP-LHWACSFGHVEIVYFLLSQP 61 (226)
T ss_pred chHHHHHhhchHHHHHHHHhcChhh---------------------h-hccccccCCce-eeeeeecCchhHHHHHHhcC
Confidence 4567777877778888887754433 2 4444 499999 999999999999999995 4
Q ss_pred ccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhh-CCCCCccccCCCCCCcHH
Q 039483 105 AKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKS-CTSVSHIYMKAPMERQAL 183 (360)
Q Consensus 105 g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~-g~~~~~~~~~d~~g~t~L 183 (360)
+..+|. +|..|+ ||||+|+..|+ .++|+.|+.+ |++++. ++..|+|+|
T Consensus 62 nv~~dd------------------kDdaGW---------tPlhia~s~g~-~evVk~Ll~r~~advna---~tn~G~T~L 110 (226)
T KOG4412|consen 62 NVKPDD------------------KDDAGW---------TPLHIAASNGN-DEVVKELLNRSGADVNA---TTNGGQTCL 110 (226)
T ss_pred CCCCCC------------------ccccCC---------chhhhhhhcCc-HHHHHHHhcCCCCCcce---ecCCCccee
Confidence 566666 788885 88888889999 9999999998 999999 999999999
Q ss_pred HHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhh
Q 039483 184 HAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALH 263 (360)
Q Consensus 184 h~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh 263 (360)
|||+..|.. +++++|++.+ +.++.+|..|.||||-|+..|..+++++|+..|+.+ +..|+ .|+||||
T Consensus 111 HyAagK~r~----------eIaqlLle~g-a~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~-n~qDk-~G~TpL~ 177 (226)
T KOG4412|consen 111 HYAAGKGRL----------EIAQLLLEKG-ALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPL-NTQDK-YGFTPLH 177 (226)
T ss_pred hhhhcCChh----------hHHHHHHhcC-CCCcccccccCchhHHHHhccchhhHHHHHhcCCCC-Ccccc-cCccHHH
Confidence 999999999 9999999999 889999999999999999999999999999999999 99999 9999999
Q ss_pred hhhcCCccc-cccccc--ccCccCCCCCCcHHHHHH
Q 039483 264 LVHGPKGCQ-NNMLAS--SLMDEGDAKGNTTVHFFA 296 (360)
Q Consensus 264 ~A~~~~~~~-~~~L~~--~~~~~~d~~g~Tpl~~A~ 296 (360)
.|..-++.+ ..+|++ ++.+..|++| ||+.+|.
T Consensus 178 ~al~e~~~d~a~lLV~~gAd~~~edke~-t~~~~a~ 212 (226)
T KOG4412|consen 178 HALAEGHPDVAVLLVRAGADTDREDKEG-TALRIAC 212 (226)
T ss_pred HHHhccCchHHHHHHHhccceeeccccC-chHHHHH
Confidence 998777777 666664 9999999988 9988875
|
|
| >PHA03100 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-34 Score=280.35 Aligned_cols=243 Identities=18% Similarity=0.148 Sum_probs=193.0
Q ss_pred CCCCCHHHHHHHHcCChHHHHHHHHHHHhhh-hcccCCc---------------ccccc-ccccccccccCCCCCCCCCh
Q 039483 22 QPQIDPNLFKVAAAGNLEPFKDMAREVIESL-LTARSRT---------------QSCIS-TSNCRRQKMCQPVTAKGDTR 84 (360)
Q Consensus 22 ~~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~-~~~~~~t---------------~~~v~-l~~~~~~~~~~~~~~~g~tp 84 (360)
.....+|||.|++.|+.++++.|++.+.+.. ....+.+ .++++ |.+. +.++ +..|..|.||
T Consensus 32 ~~~~~t~L~~A~~~~~~~ivk~Ll~~g~~~~~~~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~-ga~i-~~~d~~g~tp 109 (480)
T PHA03100 32 YKKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEY-GANV-NAPDNNGITP 109 (480)
T ss_pred hcccchhhhhhhccCCHHHHHHHHHcCCCCCCccccCcCHHHHHHHHHHHhhchHHHHHHHHHC-CCCC-CCCCCCCCch
Confidence 4556799999999999999999998422210 0011111 22333 3444 4444 4444455555
Q ss_pred HHHHHH--hcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcC--CcHHHHH
Q 039483 85 SRHVAA--KFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYE--HSSHTVV 160 (360)
Q Consensus 85 ~Lh~A~--~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g--~~~~~~~ 160 (360)
||+|+ ..|+.+++++|+++|++++. .+..| .||||.|+..| + .++++
T Consensus 110 -L~~A~~~~~~~~~iv~~Ll~~g~~~~~------------------~~~~g---------~t~L~~A~~~~~~~-~~iv~ 160 (480)
T PHA03100 110 -LLYAISKKSNSYSIVEYLLDNGANVNI------------------KNSDG---------ENLLHLYLESNKID-LKILK 160 (480)
T ss_pred -hhHHHhcccChHHHHHHHHHcCCCCCc------------------cCCCC---------CcHHHHHHHcCCCh-HHHHH
Confidence 55555 44555555555555544444 34444 58888889999 8 99999
Q ss_pred HHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCC------ChHHHHHHHcC
Q 039483 161 AILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCW------WTPIHYAAYHR 234 (360)
Q Consensus 161 ~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g------~t~Lh~A~~~~ 234 (360)
+|+++|++++. ++..|.||||+|+..|+. +++++|++.+ ++++..+..| .||||.|+..+
T Consensus 161 ~Ll~~g~din~---~d~~g~tpL~~A~~~~~~----------~iv~~Ll~~g-a~~~~~~~~~~~~~~~~t~l~~a~~~~ 226 (480)
T PHA03100 161 LLIDKGVDINA---KNRYGYTPLHIAVEKGNI----------DVIKFLLDNG-ADINAGDIETLLFTIFETPLHIAACYN 226 (480)
T ss_pred HHHHCCCCccc---ccCCCCCHHHHHHHhCCH----------HHHHHHHHcC-CCccCCCCCCCcHHHHHhHHHHHHHhC
Confidence 99999999999 899999999999999999 9999999999 8888888888 89999999999
Q ss_pred C--HHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-ccccc--cccCccCCCCCCcHHHHHHHcCCHHHHHHHhh
Q 039483 235 N--YLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLA--SSLMDEGDAKGNTTVHFFAAVHRKEIFDDLSG 309 (360)
Q Consensus 235 ~--~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~--~~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~ 309 (360)
+ .+++++|++.|+++ +.+|. .|.||||+|+..++.+ +++|+ +++++.+|..|+||+++|++.++.++++.|++
T Consensus 227 ~~~~~iv~~Ll~~g~di-n~~d~-~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~~~~~iv~~Ll~ 304 (480)
T PHA03100 227 EITLEVVNYLLSYGVPI-NIKDV-YGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLN 304 (480)
T ss_pred cCcHHHHHHHHHcCCCC-CCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHhCCHHHHHHHHh
Confidence 9 99999999999999 99999 9999999999999988 88888 49999999999999999999999999999988
Q ss_pred hh
Q 039483 310 RV 311 (360)
Q Consensus 310 ~~ 311 (360)
+.
T Consensus 305 ~g 306 (480)
T PHA03100 305 NG 306 (480)
T ss_pred cC
Confidence 74
|
|
| >PHA03095 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=276.24 Aligned_cols=231 Identities=14% Similarity=0.083 Sum_probs=204.1
Q ss_pred CCCCCHHHHHHHHcC---ChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcC-CHHH
Q 039483 22 QPQIDPNLFKVAAAG---NLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFD-HCDI 97 (360)
Q Consensus 22 ~~~~~~~L~~Aa~~G---~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g-~~~~ 97 (360)
...+.||||.|+..| +.++++.|++. +.++ +.++..|.|| ||+|+..| +.++
T Consensus 44 ~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~----------------------Gadi-n~~~~~g~Tp-Lh~A~~~~~~~~i 99 (471)
T PHA03095 44 GEYGKTPLHLYLHYSSEKVKDIVRLLLEA----------------------GADV-NAPERCGFTP-LHLYLYNATTLDV 99 (471)
T ss_pred CCCCCCHHHHHHHhcCCChHHHHHHHHHC----------------------CCCC-CCCCCCCCCH-HHHHHHcCCcHHH
Confidence 456788999999988 88888888873 7777 8888899999 99999999 5899
Q ss_pred HHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhh-h-------------------------cCHHHHHHh
Q 039483 98 VSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAY-N-------------------------KIPLCMAAE 151 (360)
Q Consensus 98 v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~-~-------------------------~t~L~~A~~ 151 (360)
+++|+++|++++. +|..|.||||+|+ + .||||.|+.
T Consensus 100 v~lLl~~ga~in~------------------~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~ 161 (471)
T PHA03095 100 IKLLIKAGADVNA------------------KDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLK 161 (471)
T ss_pred HHHHHHcCCCCCC------------------CCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHH
Confidence 9999999998887 7777888888777 1 688888877
Q ss_pred cC--CcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhc--CCcccccccCChHHHHHHHHhcCccccccccCCCChHH
Q 039483 152 YE--HSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMH--IDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPI 227 (360)
Q Consensus 152 ~g--~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~--~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~L 227 (360)
.+ + .+++++|+++|++++. .|..|.||||+++.. ++. ++++.|++.+ .+++.+|..|+|||
T Consensus 162 ~~~~~-~~iv~~Ll~~g~~~~~---~d~~g~t~Lh~~~~~~~~~~----------~i~~~Ll~~g-~~~~~~d~~g~tpL 226 (471)
T PHA03095 162 SRNAN-VELLRLLIDAGADVYA---VDDRFRSLLHHHLQSFKPRA----------RIVRELIRAG-CDPAATDMLGNTPL 226 (471)
T ss_pred cCCCC-HHHHHHHHHcCCCCcc---cCCCCCCHHHHHHHHCCCcH----------HHHHHHHHcC-CCCcccCCCCCCHH
Confidence 65 5 8999999999999999 899999999998875 566 8999999999 88999999999999
Q ss_pred HHHHHcCCH--HHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-ccccc--cccCccCCCCCCcHHHHHHHcCCHH
Q 039483 228 HYAAYHRNY--LILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLA--SSLMDEGDAKGNTTVHFFAAVHRKE 302 (360)
Q Consensus 228 h~A~~~~~~--~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~--~~~~~~~d~~g~Tpl~~A~~~~~~~ 302 (360)
|+|+..|+. .+++.|++.|+++ +.+|. .|+||||+|+..++.+ +++|+ +++++.+|..|+||||+|++.|+.+
T Consensus 227 h~Aa~~~~~~~~~v~~ll~~g~di-n~~d~-~g~TpLh~A~~~~~~~~v~~LL~~gad~n~~~~~g~tpl~~A~~~~~~~ 304 (471)
T PHA03095 227 HSMATGSSCKRSLVLPLLIAGISI-NARNR-YGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGR 304 (471)
T ss_pred HHHHhcCCchHHHHHHHHHcCCCC-CCcCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHH
Confidence 999999874 6888999999999 99998 9999999999999988 88888 5999999999999999999999999
Q ss_pred HHHHHhhhh
Q 039483 303 IFDDLSGRV 311 (360)
Q Consensus 303 i~~~l~~~~ 311 (360)
+++.|+...
T Consensus 305 ~v~~LL~~~ 313 (471)
T PHA03095 305 AVRAALAKN 313 (471)
T ss_pred HHHHHHHhC
Confidence 999888864
|
|
| >PHA02946 ankyin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=270.83 Aligned_cols=260 Identities=12% Similarity=0.106 Sum_probs=138.9
Q ss_pred HHHHHHHcCChHHHHHHHHHHHhhh--------hcccCCcccccc-ccccccccccCCCCCCCCChHHHHHHhcCCHHHH
Q 039483 28 NLFKVAAAGNLEPFKDMAREVIESL--------LTARSRTQSCIS-TSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIV 98 (360)
Q Consensus 28 ~L~~Aa~~G~~~~~~~ll~~~~~~~--------~~~~~~t~~~v~-l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v 98 (360)
+++.++..|+.+.++.++....... ....+...++++ |... +.++ +.+|..|.|| ||+||..|+.++|
T Consensus 12 sl~~~~~~~n~~~~~~~l~~~~~~g~~~~Lh~~~~~~~~~~~iv~~Ll~~-Gadv-n~~d~~G~Tp-Lh~Aa~~g~~eiv 88 (446)
T PHA02946 12 SLYAKYNSKNLDVFRNMLQAIEPSGNYHILHAYCGIKGLDERFVEELLHR-GYSP-NETDDDGNYP-LHIASKINNNRIV 88 (446)
T ss_pred HHHHHHccCcHHHHHHHHhccCCCCCChHHHHHHHhcCCCHHHHHHHHHC-cCCC-CccCCCCCCH-HHHHHHcCCHHHH
Confidence 4666777777777777665210000 000111245566 6666 8899 9999999999 9999999999999
Q ss_pred HHHHHhccccCcccccccccchh-----------hHHH------hh-cccCCCCchHHHhhh------------------
Q 039483 99 SVLIERAKLVQHEDEELESGVGA-----------SRQM------IR-MTNKEKHTTLHEAYN------------------ 142 (360)
Q Consensus 99 ~~Ll~~g~~~~~~~~~~~~~~~~-----------~~~~------l~-~~d~~g~t~Lh~a~~------------------ 142 (360)
++|+++|++++.+|..+.++.+. ++.+ ++ ..|..|.||||.|.+
T Consensus 89 ~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~aa~~~~~~vv~~Ll~~gad~~~ 168 (446)
T PHA02946 89 AMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLLACTDPSERVFKKIMSIGFEARI 168 (446)
T ss_pred HHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHHHHHCCChHHHHHHHhccccccc
Confidence 99999999999955555555321 1112 11 234555555553331
Q ss_pred -----cCHHHHHHhcCCc-HHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcC--CcccccccCChHHHHHHHHhcCcc
Q 039483 143 -----KIPLCMAAEYEHS-SHTVVAILKSCTSVSHIYMKAPMERQALHAATMHI--DLCKFNHTLSNDCAVQQLFEGKKS 214 (360)
Q Consensus 143 -----~t~L~~A~~~g~~-~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~--~~~~~~~~~~~~~~~~~Ll~~~~~ 214 (360)
+||||.|+..++. .+++++|+++|++++. +|..|.||||+|+..+ +. +++++|+. + +
T Consensus 169 ~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~---~d~~G~TpLH~Aa~~~~~~~----------~iv~lLl~-g-a 233 (446)
T PHA02946 169 VDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSK---PDHDGNTPLHIVCSKTVKNV----------DIINLLLP-S-T 233 (446)
T ss_pred cCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcc---cCCCCCCHHHHHHHcCCCcH----------HHHHHHHc-C-C
Confidence 4555554443220 3455555555555555 5555555555555443 33 44554442 3 4
Q ss_pred ccccccCCCChHHHHHHHcCC-HHHHHHHHhcCCcc-------------------ccccccCCCCchhhhhhcCCccc-c
Q 039483 215 MIKGIDQCWWTPIHYAAYHRN-YLILKLILKIDRTA-------------------AKIADKDRKMTALHLVHGPKGCQ-N 273 (360)
Q Consensus 215 ~i~~~d~~g~t~Lh~A~~~~~-~~~v~~Ll~~g~~~-------------------~~~~d~~~g~tpLh~A~~~~~~~-~ 273 (360)
+++.+|..|+||||+|+..++ .+++++|+++|.++ .+.++...|+||||+|+..++.+ +
T Consensus 234 din~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~~~~~~~~a~~~~~~~~~e~l~~~g~~~~~TpLh~Aa~~g~~eiv 313 (446)
T PHA02946 234 DVNKQNKFGDSPLTLLIKTLSPAHLINKLLSTSNVITDQTVNICIFYDRDDVLEIINDKGKQYDSTDFKMAVEVGSIRCV 313 (446)
T ss_pred CCCCCCCCCCCHHHHHHHhCChHHHHHHHHhCCCCCCCcHHHHHHHcCchHHHHHHHHcCcccCCCHHHHHHHcCCHHHH
Confidence 455555555555555555544 24445555444321 00111012445555555555555 4
Q ss_pred cccccccCccCCCCCCcHHHHHHHcCCHHHHHHHhhh
Q 039483 274 NMLASSLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGR 310 (360)
Q Consensus 274 ~~L~~~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~ 310 (360)
++|+..+ ..|+||||+|+..++.++++.|...
T Consensus 314 k~Ll~~~-----~~~~t~L~~A~~~~~~~~v~~Ll~~ 345 (446)
T PHA02946 314 KYLLDND-----IICEDAMYYAVLSEYETMVDYLLFN 345 (446)
T ss_pred HHHHHCC-----CccccHHHHHHHhCHHHHHHHHHHC
Confidence 5554422 2345555555555555555555443
|
|
| >PHA02874 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-33 Score=268.42 Aligned_cols=221 Identities=17% Similarity=0.128 Sum_probs=188.5
Q ss_pred cccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccch---------hhHHHhhcccCCCCchHHHh
Q 039483 70 RQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVG---------ASRQMIRMTNKEKHTTLHEA 140 (360)
Q Consensus 70 ~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~---------~~~~~l~~~d~~g~t~Lh~a 140 (360)
+..+ +..+..|.|| ||.|+..|+.++|++|+++|++++..+..+.++.. +++.++...-. .+.+...
T Consensus 25 ~~~~-n~~~~~~~tp-L~~A~~~g~~~iv~~Ll~~Ga~~n~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~--~~~~~~~ 100 (434)
T PHA02874 25 GNCI-NISVDETTTP-LIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDIIKLLIDNGVD--TSILPIP 100 (434)
T ss_pred CCCC-CCcCCCCCCH-HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC--CCcchhc
Confidence 6667 7888899999 99999999999999999999999988877777733 33444432111 1111110
Q ss_pred h----------------------hcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCccccccc
Q 039483 141 Y----------------------NKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHT 198 (360)
Q Consensus 141 ~----------------------~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~ 198 (360)
. ..||||+|+..|+ .+++++|+++|++++. +|..|.||||+|+..++.
T Consensus 101 ~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~-~~~v~~Ll~~gad~n~---~d~~g~tpLh~A~~~~~~------ 170 (434)
T PHA02874 101 CIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGD-LESIKMLFEYGADVNI---EDDNGCYPIHIAIKHNFF------ 170 (434)
T ss_pred cCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCC-HHHHHHHHhCCCCCCC---cCCCCCCHHHHHHHCCcH------
Confidence 0 1799999999999 9999999999999999 999999999999999999
Q ss_pred CChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCcccccccc-
Q 039483 199 LSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQNNMLA- 277 (360)
Q Consensus 199 ~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~~~~L~- 277 (360)
+++++|++.+ .+++..+..|+||||+|+..|+.+++++|++.|+++ +.++. .|.||||+|+..+...+.+|+
T Consensus 171 ----~iv~~Ll~~g-~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i-~~~~~-~g~TpL~~A~~~~~~~i~~Ll~ 243 (434)
T PHA02874 171 ----DIIKLLLEKG-AYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHI-MNKCK-NGFTPLHNAIIHNRSAIELLIN 243 (434)
T ss_pred ----HHHHHHHHCC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-cCCCC-CCCCHHHHHHHCChHHHHHHHc
Confidence 9999999999 778899999999999999999999999999999999 99999 999999999987654455555
Q ss_pred cccCccCCCCCCcHHHHHHHcC-CHHHHHHHhhhh
Q 039483 278 SSLMDEGDAKGNTTVHFFAAVH-RKEIFDDLSGRV 311 (360)
Q Consensus 278 ~~~~~~~d~~g~Tpl~~A~~~~-~~~i~~~l~~~~ 311 (360)
+++++.+|..|+||||+|+..+ +.++++.|+...
T Consensus 244 ~~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~g 278 (434)
T PHA02874 244 NASINDQDIDGSTPLHHAINPPCDIDIIDILLYHK 278 (434)
T ss_pred CCCCCCcCCCCCCHHHHHHhcCCcHHHHHHHHHCc
Confidence 5899999999999999999876 789999998864
|
|
| >KOG0510 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=269.99 Aligned_cols=257 Identities=18% Similarity=0.185 Sum_probs=219.4
Q ss_pred CCCCCCCHHHHHHHHcCChHHHHHHHHHHHhhh------hccc-----CCcccccc-ccccccccccCCCCCCCCChHHH
Q 039483 20 TSQPQIDPNLFKVAAAGNLEPFKDMAREVIESL------LTAR-----SRTQSCIS-TSNCRRQKMCQPVTAKGDTRSRH 87 (360)
Q Consensus 20 ~~~~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~------~~~~-----~~t~~~v~-l~~~~~~~~~~~~~~~g~tp~Lh 87 (360)
....+..+|||+|+....++.++.|++.+.+.. ..|. ++..++++ |.++ +.++ +..|..|.|| ||
T Consensus 83 a~D~~~n~~l~~a~~~~~~~~i~~Lls~gad~~~~n~~~~aplh~A~~~~~~s~L~~Ll~~-~~dv-nl~de~~~Tp-Lh 159 (929)
T KOG0510|consen 83 AKDSADNTPLHAAVEYNQGDKIQVLLSYGADTPLRNLNKNAPLHLAADSGNYSCLKLLLDY-GADV-NLEDENGFTP-LH 159 (929)
T ss_pred hhhcccCchhHHHhhcchHHHHHHHHhcCCCCChhhhhccCchhhccccchHHHHHHHHHh-cCCc-cccccCCCch-hh
Confidence 344667789999999999999999999432221 1121 11245666 8888 8999 9999999999 99
Q ss_pred HHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhh-h------------------------
Q 039483 88 VAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAY-N------------------------ 142 (360)
Q Consensus 88 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~-~------------------------ 142 (360)
+||+.++.|..+.|++.|+++.. .|.+|.+|+|.|+ +
T Consensus 160 ~A~~~~~~E~~k~Li~~~a~~~K------------------~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~ 221 (929)
T KOG0510|consen 160 LAARKNKVEAKKELINKGADPCK------------------SDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFD 221 (929)
T ss_pred HHHhcChHHHHHHHHhcCCCCCc------------------ccCcCCchHHHHHHhcchhhhhhhhccccchhhcccccc
Confidence 99999999988999999999988 7888888888888 2
Q ss_pred ----cCHHHHHHhcCCcHHHHHHHHhhCCCCCc------------cccCCCCCCcHHHHHHhcCCcccccccCChHHHHH
Q 039483 143 ----KIPLCMAAEYEHSSHTVVAILKSCTSVSH------------IYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQ 206 (360)
Q Consensus 143 ----~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~------------~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~ 206 (360)
.||||.|+..|+ .++++.+|+.|..... +.+.|..|.||||+|++.|++ +.++
T Consensus 222 ~n~~~~pLhlAve~g~-~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~----------~svd 290 (929)
T KOG0510|consen 222 NNEKATPLHLAVEGGD-IEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGP----------ESVD 290 (929)
T ss_pred cCCCCcchhhhhhcCC-HHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCCh----------hHHH
Confidence 799999999999 9999999998854321 112788999999999999999 9999
Q ss_pred HHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHh-cCCccccccccCCCCchhhhhhcCCccc-cccccc--ccCc
Q 039483 207 QLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILK-IDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLAS--SLMD 282 (360)
Q Consensus 207 ~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~-~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~~--~~~~ 282 (360)
.|+..| ++++.++.++.||||.||.+|++++|+-||+ .|..+.+..|. .|+||||+|+..++.. +++|+. ++..
T Consensus 291 ~Ll~~G-a~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~-~g~tpLHlaa~~gH~~v~qlLl~~GA~~~ 368 (929)
T KOG0510|consen 291 NLLGFG-ASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDL-HGMTPLHLAAKSGHDRVVQLLLNKGALFL 368 (929)
T ss_pred HHHHcC-CcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccc-cCCCchhhhhhcCHHHHHHHHHhcChhhh
Confidence 999999 8899999999999999999999999999997 78777788998 9999999999888888 888883 5554
Q ss_pred ---cCCCCCCcHHHHHHHcCCHHHHHHHhhh
Q 039483 283 ---EGDAKGNTTVHFFAAVHRKEIFDDLSGR 310 (360)
Q Consensus 283 ---~~d~~g~Tpl~~A~~~~~~~i~~~l~~~ 310 (360)
..|.+|+||||+|+++|+..++..|...
T Consensus 369 ~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~ 399 (929)
T KOG0510|consen 369 NMSEADSDGNTALHLAAKYGNTSAVQKLISH 399 (929)
T ss_pred cccccccCCchhhhHHHHhccHHHHHHHHHc
Confidence 4599999999999999999999988874
|
|
| >PHA02791 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=248.64 Aligned_cols=214 Identities=14% Similarity=0.105 Sum_probs=186.1
Q ss_pred CCCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHH
Q 039483 22 QPQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVL 101 (360)
Q Consensus 22 ~~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~L 101 (360)
...+.||||.|+..|+.++++.|++. +.++ +.. +|.|| ||+|+..|+.+++++|
T Consensus 27 D~~G~TpLh~Aa~~g~~eiv~~Ll~~----------------------ga~~-n~~--d~~Tp-Lh~Aa~~g~~eiV~lL 80 (284)
T PHA02791 27 DVHGHSALYYAIADNNVRLVCTLLNA----------------------GALK-NLL--ENEFP-LHQAATLEDTKIVKIL 80 (284)
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHC----------------------cCCC-cCC--CCCCH-HHHHHHCCCHHHHHHH
Confidence 45678999999999999999999884 3444 444 36899 9999999999999999
Q ss_pred HHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCC-C
Q 039483 102 IERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPME-R 180 (360)
Q Consensus 102 l~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g-~ 180 (360)
++.|++++. +|..|+ ||||+|+..|+ .+++++|+++|++++. ++..| .
T Consensus 81 L~~Gadvn~------------------~d~~G~---------TpLh~Aa~~g~-~eivk~Ll~~gadin~---~~~~g~~ 129 (284)
T PHA02791 81 LFSGMDDSQ------------------FDDKGN---------TALYYAVDSGN-MQTVKLFVKKNWRLMF---YGKTGWK 129 (284)
T ss_pred HHCCCCCCC------------------CCCCCC---------CHHHHHHHcCC-HHHHHHHHHCCCCcCc---cCCCCCc
Confidence 999999988 788885 88888899999 9999999999999988 88877 5
Q ss_pred cHHHHHHhcCCcccccccCChHHHHHHHHhcCcccccccc-CCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCC
Q 039483 181 QALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGID-QCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKM 259 (360)
Q Consensus 181 t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d-~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~ 259 (360)
||||+|+..|+. +++++|++.++.. .| ..|.||||+|+..|+.+++++|+++|+++ +.++. .|.
T Consensus 130 TpL~~Aa~~g~~----------eivk~LL~~~~~~---~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~-n~~d~-~g~ 194 (284)
T PHA02791 130 TSFYHAVMLNDV----------SIVSYFLSEIPST---FDLAILLSCIHITIKNGHVDMMILLLDYMTST-NTNNS-LLF 194 (284)
T ss_pred HHHHHHHHcCCH----------HHHHHHHhcCCcc---cccccCccHHHHHHHcCCHHHHHHHHHCCCCC-CcccC-CCC
Confidence 899999999999 9999999987332 23 35899999999999999999999999999 99999 899
Q ss_pred ch-hhhhhcCCccc-ccccc--cccCccCCCCCCcHHHHHHHcCCHHHHHHHhhhhccc
Q 039483 260 TA-LHLVHGPKGCQ-NNMLA--SSLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGRVKAT 314 (360)
Q Consensus 260 tp-Lh~A~~~~~~~-~~~L~--~~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~~~~~ 314 (360)
|| ||+|+..++.+ +++|+ +++++.+|..| ||+ ++.|+++.|++.--++
T Consensus 195 t~~L~~Aa~~~~~e~v~lLl~~Ga~in~~~~~~-~~l------~~~e~~~~ll~~~~~~ 246 (284)
T PHA02791 195 IPDIKLAIDNKDLEMLQALFKYDINIYSVNLEN-VLL------DDAEIAKMIIEKHVEY 246 (284)
T ss_pred ChHHHHHHHcCCHHHHHHHHHCCCCCccCcccC-ccC------CCHHHHHHHHHhhhhh
Confidence 87 99999999999 99998 49999998854 666 8889999999875443
|
|
| >PHA02716 CPXV016; CPX019; EVM010; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=273.61 Aligned_cols=248 Identities=13% Similarity=0.061 Sum_probs=188.2
Q ss_pred CCCCHHHHHHHHc--CChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCC--HHHH
Q 039483 23 PQIDPNLFKVAAA--GNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDH--CDIV 98 (360)
Q Consensus 23 ~~~~~~L~~Aa~~--G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~--~~~v 98 (360)
.++.+|||.|+.. |+.++++.|++. +.++ +.+|..|.|| ||+|+..|+ .++|
T Consensus 175 ~~G~TpLH~A~~n~~~~~eIVklLLe~----------------------GADV-N~kD~~G~TP-LH~Aa~~g~~~~eIV 230 (764)
T PHA02716 175 KTGYGILHAYLGNMYVDIDILEWLCNN----------------------GVNV-NLQNNHLITP-LHTYLITGNVCASVI 230 (764)
T ss_pred CCCCcHHHHHHHhccCCHHHHHHHHHc----------------------CCCC-CCCCCCCCCH-HHHHHHcCCCCHHHH
Confidence 4566777766543 466777777663 7788 9999999999 999999995 5899
Q ss_pred HHHHHhccccCcccccccccchh------------hHHHhhcccCCC--Cc--hHHH---hh-h----------------
Q 039483 99 SVLIERAKLVQHEDEELESGVGA------------SRQMIRMTNKEK--HT--TLHE---AY-N---------------- 142 (360)
Q Consensus 99 ~~Ll~~g~~~~~~~~~~~~~~~~------------~~~~l~~~d~~g--~t--~Lh~---a~-~---------------- 142 (360)
++|+++|++++.+|..+.++.+. .+.++...+..+ .+ ++|. |+ +
T Consensus 231 klLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdI 310 (764)
T PHA02716 231 KKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKL 310 (764)
T ss_pred HHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCce
Confidence 99999999999966666665432 122222111111 11 1221 11 1
Q ss_pred -------cCHHHHHHh--cCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhc--------------CCcccccccC
Q 039483 143 -------KIPLCMAAE--YEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMH--------------IDLCKFNHTL 199 (360)
Q Consensus 143 -------~t~L~~A~~--~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~--------------~~~~~~~~~~ 199 (360)
+||||+|+. .++ .+++++|+++|++++. +|..|+||||+|+.. ++.
T Consensus 311 N~kD~~G~TPLH~Aaa~~~~~-~eIVklLLe~GADIN~---kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~------- 379 (764)
T PHA02716 311 HYKDSAGRTCLHQYILRHNIS-TDIIKLLHEYGNDLNE---PDNIGNTVLHTYLSMLSVVNILDPETDNDIRL------- 379 (764)
T ss_pred eccCCCCCCHHHHHHHHhCCC-chHHHHHHHcCCCCcc---CCCCCCCHHHHHHHhhhhhccccccccccChH-------
Confidence 789998764 457 8999999999999999 999999999998752 466
Q ss_pred ChHHHHHHHHhcCccccccccCCCChHHHHH----HHcCCHHHHHHHHhcCC----------------------------
Q 039483 200 SNDCAVQQLFEGKKSMIKGIDQCWWTPIHYA----AYHRNYLILKLILKIDR---------------------------- 247 (360)
Q Consensus 200 ~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A----~~~~~~~~v~~Ll~~g~---------------------------- 247 (360)
+++++|++.+ ++++.+|..|+||||.+ ...++.+++++|++.|+
T Consensus 380 ---eVVklLL~~G-ADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a 455 (764)
T PHA02716 380 ---DVIQCLISLG-ADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIHHIIA 455 (764)
T ss_pred ---HHHHHHHHCC-CCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHHHHHH
Confidence 9999999999 88999999999999942 23467888888887543
Q ss_pred ---------------------------------ccccccccCCCCchhhhhhcCCccc------ccccc--cccCccCCC
Q 039483 248 ---------------------------------TAAKIADKDRKMTALHLVHGPKGCQ------NNMLA--SSLMDEGDA 286 (360)
Q Consensus 248 ---------------------------------~~~~~~d~~~g~tpLh~A~~~~~~~------~~~L~--~~~~~~~d~ 286 (360)
++ +..|. .|+||||+|+..++.+ +++|+ +++++.+|+
T Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~ii~~~nv-N~~D~-~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~GADIN~~d~ 533 (764)
T PHA02716 456 KYNIPTDLYTDEYEPYDSTKIHDVYHCAIIERYNN-AVCET-SGMTPLHVSIISHTNANIVMDSFVYLLSIQYNINIPTK 533 (764)
T ss_pred hcCcchhhhhhhhhhccccccchhhHHHHHhhccc-cccCC-CCCCHHHHHHHcCCccchhHHHHHHHHhCCCCCcccCC
Confidence 11 33466 8999999999988775 38888 499999999
Q ss_pred CCCcHHHHHHHcCCH-----HHHHHHhhhh
Q 039483 287 KGNTTVHFFAAVHRK-----EIFDDLSGRV 311 (360)
Q Consensus 287 ~g~Tpl~~A~~~~~~-----~i~~~l~~~~ 311 (360)
+|+||||+|+++|+. ++++.|++..
T Consensus 534 ~G~TPLh~A~~~g~~~~~~~eIvk~LL~~g 563 (764)
T PHA02716 534 NGVTPLMLTMRNNRLSGHQWYIVKNILDKR 563 (764)
T ss_pred CCCCHHHHHHHcCCccccHHHHHHHHHhcC
Confidence 999999999999976 9999888854
|
|
| >PHA02875 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-32 Score=262.65 Aligned_cols=221 Identities=15% Similarity=0.107 Sum_probs=192.6
Q ss_pred CHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHhc
Q 039483 26 DPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIERA 105 (360)
Q Consensus 26 ~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g 105 (360)
.+.||.|++.|+.++++.|++. +.++ +..+..|.|| ||+|+..|+.+++++|+++|
T Consensus 3 ~~~L~~A~~~g~~~iv~~Ll~~----------------------g~~~-n~~~~~g~tp-L~~A~~~~~~~~v~~Ll~~g 58 (413)
T PHA02875 3 QVALCDAILFGELDIARRLLDI----------------------GINP-NFEIYDGISP-IKLAMKFRDSEAIKLLMKHG 58 (413)
T ss_pred chHHHHHHHhCCHHHHHHHHHC----------------------CCCC-CccCCCCCCH-HHHHHHcCCHHHHHHHHhCC
Confidence 4679999999999999999984 5566 7788899999 99999999999999999999
Q ss_pred cccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHH
Q 039483 106 KLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHA 185 (360)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~ 185 (360)
++++. .+..|. ||||.|+..|+ .+++++|++.|..... ..+..|.||||+
T Consensus 59 a~~~~------------------~~~~~~---------t~L~~A~~~g~-~~~v~~Ll~~~~~~~~--~~~~~g~tpL~~ 108 (413)
T PHA02875 59 AIPDV------------------KYPDIE---------SELHDAVEEGD-VKAVEELLDLGKFADD--VFYKDGMTPLHL 108 (413)
T ss_pred CCccc------------------cCCCcc---------cHHHHHHHCCC-HHHHHHHHHcCCcccc--cccCCCCCHHHH
Confidence 98876 555664 78888888999 9999999999876644 156678999999
Q ss_pred HHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhh
Q 039483 186 ATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLV 265 (360)
Q Consensus 186 A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A 265 (360)
|+..|+. +++++|++.+ ++++..+..|.||||+|+..|+.+++++|+++|+++ +.+|. .|.||||+|
T Consensus 109 A~~~~~~----------~iv~~Ll~~g-ad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~-~~~d~-~g~TpL~~A 175 (413)
T PHA02875 109 ATILKKL----------DIMKLLIARG-ADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACL-DIEDC-CGCTPLIIA 175 (413)
T ss_pred HHHhCCH----------HHHHHHHhCC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCC-CCCCC-CCCCHHHHH
Confidence 9999999 9999999998 788888999999999999999999999999999998 89998 999999999
Q ss_pred hcCCccc-ccccc--cccCccCCCCCC-cHHHHHHHcCCHHHHHHHhhhhcc
Q 039483 266 HGPKGCQ-NNMLA--SSLMDEGDAKGN-TTVHFFAAVHRKEIFDDLSGRVKA 313 (360)
Q Consensus 266 ~~~~~~~-~~~L~--~~~~~~~d~~g~-Tpl~~A~~~~~~~i~~~l~~~~~~ 313 (360)
+..++.+ +++|+ +++++..+..|. ||+|+|+..++.++++.|+++...
T Consensus 176 ~~~g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad 227 (413)
T PHA02875 176 MAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGAD 227 (413)
T ss_pred HHcCCHHHHHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHHCCcC
Confidence 9998888 88887 488888888774 888889999999999999887533
|
|
| >PHA02946 ankyin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-32 Score=262.23 Aligned_cols=242 Identities=13% Similarity=0.090 Sum_probs=193.0
Q ss_pred CCCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcC--CHHHHH
Q 039483 22 QPQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFD--HCDIVS 99 (360)
Q Consensus 22 ~~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g--~~~~v~ 99 (360)
...+.||||.||+.|+.++++.|++. ++++ +.+|..|.|| ||+|+..+ +.++++
T Consensus 69 d~~G~TpLh~Aa~~g~~eiv~lLL~~----------------------GAdi-n~~d~~g~Tp-Lh~A~~~~~~~~e~v~ 124 (446)
T PHA02946 69 DDDGNYPLHIASKINNNRIVAMLLTH----------------------GADP-NACDKQHKTP-LYYLSGTDDEVIERIN 124 (446)
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHC----------------------cCCC-CCCCCCCCCH-HHHHHHcCCchHHHHH
Confidence 45567788888888888888888773 6666 7777888888 88877655 367788
Q ss_pred HHHHhccccCc-ccccccccc--------hhhHHH------hhcccCCCCchHHHhh-h---------------------
Q 039483 100 VLIERAKLVQH-EDEELESGV--------GASRQM------IRMTNKEKHTTLHEAY-N--------------------- 142 (360)
Q Consensus 100 ~Ll~~g~~~~~-~~~~~~~~~--------~~~~~~------l~~~d~~g~t~Lh~a~-~--------------------- 142 (360)
+|+++|++++. .|..+.++. +..+.+ ++.+|..|+||||+|+ .
T Consensus 125 lLl~~Gadin~~~d~~g~tpL~aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~ 204 (446)
T PHA02946 125 LLVQYGAKINNSVDEEGCGPLLACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKP 204 (446)
T ss_pred HHHHcCCCcccccCCCCCcHHHHHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCccc
Confidence 88888887774 455555542 222322 4568999999999876 1
Q ss_pred ----cCHHHHHHhcC--CcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCC-cccccccCChHHHHHHHHhcCccc
Q 039483 143 ----KIPLCMAAEYE--HSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHID-LCKFNHTLSNDCAVQQLFEGKKSM 215 (360)
Q Consensus 143 ----~t~L~~A~~~g--~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~-~~~~~~~~~~~~~~~~Ll~~~~~~ 215 (360)
.||||+|+..| + .+++++|+. |++++. +|..|.||||+|+..++ . ++++.|+..+ ..
T Consensus 205 d~~G~TpLH~Aa~~~~~~-~~iv~lLl~-gadin~---~d~~G~TpLh~A~~~~~~~----------~~~~~Ll~~g-~~ 268 (446)
T PHA02946 205 DHDGNTPLHIVCSKTVKN-VDIINLLLP-STDVNK---QNKFGDSPLTLLIKTLSPA----------HLINKLLSTS-NV 268 (446)
T ss_pred CCCCCCHHHHHHHcCCCc-HHHHHHHHc-CCCCCC---CCCCCCCHHHHHHHhCChH----------HHHHHHHhCC-CC
Confidence 79999999986 6 899999885 899999 99999999999999987 5 7889999886 32
Q ss_pred c--------------------ccc-cCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-c
Q 039483 216 I--------------------KGI-DQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-N 273 (360)
Q Consensus 216 i--------------------~~~-d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~ 273 (360)
+ +.. +..|.||||+|+..|+.+++++|+++|+ .|+||||+|+..++.+ +
T Consensus 269 ~~~~~~~~a~~~~~~~~~e~l~~~g~~~~~TpLh~Aa~~g~~eivk~Ll~~~~---------~~~t~L~~A~~~~~~~~v 339 (446)
T PHA02946 269 ITDQTVNICIFYDRDDVLEIINDKGKQYDSTDFKMAVEVGSIRCVKYLLDNDI---------ICEDAMYYAVLSEYETMV 339 (446)
T ss_pred CCCcHHHHHHHcCchHHHHHHHHcCcccCCCHHHHHHHcCCHHHHHHHHHCCC---------ccccHHHHHHHhCHHHHH
Confidence 1 111 2357799999999999999999999873 6789999999999888 8
Q ss_pred ccccc--ccCccCCCCCCcHHHHHHHcCCHHHHHHHhhhhcc
Q 039483 274 NMLAS--SLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGRVKA 313 (360)
Q Consensus 274 ~~L~~--~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~~~~ 313 (360)
++|+. ++++.+ ..|+||+|+|++.++.++++.|+...+.
T Consensus 340 ~~Ll~~ga~~n~~-~~G~t~l~~a~~~~~~~~~~~ll~~~~~ 380 (446)
T PHA02946 340 DYLLFNHFSVDSV-VNGHTCMSECVRLNNPVILSKLMLHNPT 380 (446)
T ss_pred HHHHHCCCCCCCc-cccccHHHHHHHcCCHHHHHHHHhcCcc
Confidence 88884 888885 5899999999999999999999987533
|
|
| >PHA02878 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-32 Score=265.54 Aligned_cols=235 Identities=19% Similarity=0.133 Sum_probs=193.3
Q ss_pred CCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHH
Q 039483 23 PQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLI 102 (360)
Q Consensus 23 ~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll 102 (360)
....+|||.||+.|+.++++.|++. +.++ +.+|..|.|| ||+||..|+.++++.|+
T Consensus 35 ~~~~tPLh~A~~~g~~e~vk~Ll~~----------------------gadv-n~~d~~g~Tp-Lh~A~~~g~~~~v~~Ll 90 (477)
T PHA02878 35 LIPFIPLHQAVEARNLDVVKSLLTR----------------------GHNV-NQPDHRDLTP-LHIICKEPNKLGMKEMI 90 (477)
T ss_pred ccCcchHHHHHHcCCHHHHHHHHHC----------------------CCCC-CCCCCCCCCH-HHHHHHCccHhHHHHHH
Confidence 3456899999999999999999984 6677 8899999999 99999999999999999
Q ss_pred HhccccCccccccccc---------ch---------------------------------hhHHH------hhcccCC-C
Q 039483 103 ERAKLVQHEDEELESG---------VG---------------------------------ASRQM------IRMTNKE-K 133 (360)
Q Consensus 103 ~~g~~~~~~~~~~~~~---------~~---------------------------------~~~~~------l~~~d~~-g 133 (360)
+.+.+.+.. .+.++ .+ +.+.+ ++..+.. |
T Consensus 91 ~~~~~~~~~--~~~~~l~~a~~~~~~ei~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g 168 (477)
T PHA02878 91 RSINKCSVF--YTLVAIKDAFNNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKG 168 (477)
T ss_pred HHHhccccc--cchhhHHHHHHcCCHHHHHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCC
Confidence 876544321 11111 11 11222 2333444 4
Q ss_pred CchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCc
Q 039483 134 HTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKK 213 (360)
Q Consensus 134 ~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~ 213 (360)
.||||+|+..|+ .+++++|+++|++++. +|..|.||||+|+..++. +++++|++.+
T Consensus 169 ---------~tpLh~A~~~~~-~~iv~~Ll~~gad~n~---~d~~g~tpLh~A~~~~~~----------~iv~~Ll~~g- 224 (477)
T PHA02878 169 ---------NTALHYATENKD-QRLTELLLSYGANVNI---PDKTNNSPLHHAVKHYNK----------PIVHILLENG- 224 (477)
T ss_pred ---------CCHHHHHHhCCC-HHHHHHHHHCCCCCCC---cCCCCCCHHHHHHHhCCH----------HHHHHHHHcC-
Confidence 588888999999 9999999999999999 999999999999999999 9999999999
Q ss_pred cccccccCCCChHHHHHHHc-CCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-ccccc--cccCccCCCCCC
Q 039483 214 SMIKGIDQCWWTPIHYAAYH-RNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLA--SSLMDEGDAKGN 289 (360)
Q Consensus 214 ~~i~~~d~~g~t~Lh~A~~~-~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~--~~~~~~~d~~g~ 289 (360)
++++.+|..|+||||+|+.. ++.+++++|+++|+++ +.++...|.||||+|+ ++.+ +++|+ +++++.+|..|+
T Consensus 225 a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadv-n~~~~~~g~TpLh~A~--~~~~~v~~Ll~~gadin~~d~~g~ 301 (477)
T PHA02878 225 ASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDV-NAKSYILGLTALHSSI--KSERKLKLLLEYGADINSLNSYKL 301 (477)
T ss_pred CCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCC-CccCCCCCCCHHHHHc--cCHHHHHHHHHCCCCCCCcCCCCC
Confidence 88999999999999999976 6899999999999999 8887537999999993 3445 78887 499999999999
Q ss_pred cHHHHHHHcC-CHHHHHHHhhh
Q 039483 290 TTVHFFAAVH-RKEIFDDLSGR 310 (360)
Q Consensus 290 Tpl~~A~~~~-~~~i~~~l~~~ 310 (360)
||||+|++.+ ..++.+.|...
T Consensus 302 TpL~~A~~~~~~~~~~~~li~~ 323 (477)
T PHA02878 302 TPLSSAVKQYLCINIGRILISN 323 (477)
T ss_pred CHHHHHHHHcCccchHHHHHHH
Confidence 9999999854 45667666554
|
|
| >KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-32 Score=256.67 Aligned_cols=210 Identities=21% Similarity=0.210 Sum_probs=189.5
Q ss_pred CCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHH
Q 039483 24 QIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIE 103 (360)
Q Consensus 24 ~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~ 103 (360)
+.-..++.|++.|+++.++.|++.+ +..+ +.+|.+|.|+ ||+||.+++.+++++|++
T Consensus 43 ~~~~~~v~A~q~G~l~~v~~lve~~---------------------g~~v-~~~D~~g~tl-LHWAAiNNrl~v~r~li~ 99 (600)
T KOG0509|consen 43 SSLDDIVKATQYGELETVKELVESE---------------------GESV-NNPDREGVTL-LHWAAINNRLDVARYLIS 99 (600)
T ss_pred hhhhhhhhHhhcchHHHHHHHHhhc---------------------CcCC-CCCCcCCccc-eeHHHHcCcHHHHHHHHH
Confidence 3445689999999999999999942 4566 8899999999 999999999999999999
Q ss_pred hccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHH
Q 039483 104 RAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQAL 183 (360)
Q Consensus 104 ~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~L 183 (360)
+|+++|. ...... .||||+|+++|+ ..+|++|+++|++++. +|..|.+||
T Consensus 100 ~gadvn~------------------~gG~l~--------stPLHWAar~G~-~~vv~lLlqhGAdpt~---~D~~G~~~l 149 (600)
T KOG0509|consen 100 HGADVNA------------------IGGVLG--------STPLHWAARNGH-ISVVDLLLQHGADPTL---KDKQGLTPL 149 (600)
T ss_pred cCCCccc------------------cCCCCC--------CCcchHHHHcCc-HHHHHHHHHcCCCCce---ecCCCCcHH
Confidence 9999998 332221 599999999999 9999999999999999 999999999
Q ss_pred HHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhh
Q 039483 184 HAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALH 263 (360)
Q Consensus 184 h~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh 263 (360)
|.|+..++. -++-+|+..+ .+++.+|.+|+||||+|+.+|+...++.||+.|+.+ ...|...|.||||
T Consensus 150 Hla~~~~~~----------~~vayll~~~-~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~-~~~d~~~g~TpLH 217 (600)
T KOG0509|consen 150 HLAAQFGHT----------ALVAYLLSKG-ADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASL-LLTDDNHGNTPLH 217 (600)
T ss_pred HHHHHhCch----------HHHHHHHHhc-ccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhcccc-cccccccCCchHH
Confidence 999999999 9999999999 999999999999999999999988899999999999 7777339999999
Q ss_pred hhhcCCccc-cccccc--ccCccCCCCCCcHHHHHHHc
Q 039483 264 LVHGPKGCQ-NNMLAS--SLMDEGDAKGNTTVHFFAAV 298 (360)
Q Consensus 264 ~A~~~~~~~-~~~L~~--~~~~~~d~~g~Tpl~~A~~~ 298 (360)
+|+..++.. +.++.+ ++.+.+|.+|.||+++|.+.
T Consensus 218 wa~~~gN~~~v~Ll~~g~~~~d~~~~~g~tp~~LA~~~ 255 (600)
T KOG0509|consen 218 WAVVGGNLTAVKLLLEGGADLDKTNTNGKTPFDLAQER 255 (600)
T ss_pred HHHhcCCcceEehhhhcCCcccccccCCCCHHHHHHHh
Confidence 999999999 674443 88899999999999999877
|
|
| >PHA02876 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-32 Score=275.56 Aligned_cols=250 Identities=16% Similarity=0.163 Sum_probs=209.3
Q ss_pred CCCCCHHHHHHHHcCChHHHHHHHHHHHhhh-hcccCCc----------ccc----------------------------
Q 039483 22 QPQIDPNLFKVAAAGNLEPFKDMAREVIESL-LTARSRT----------QSC---------------------------- 62 (360)
Q Consensus 22 ~~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~-~~~~~~t----------~~~---------------------------- 62 (360)
...+.||||.||+.|+.++++.|++.+.+.. .+..+.+ .++
T Consensus 175 d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~~~~~L~~ai~~~~~~ 254 (682)
T PHA02876 175 DIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNIDTIKAIIDNRSNINKNDLSLLKAIRNEDLE 254 (682)
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCcHHHHHHHHcCCHH
Confidence 4568899999999999999999999532221 1122222 222
Q ss_pred -cc-ccccccccccCCCCCCCCChHHHHHHhcCCH-HHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHH
Q 039483 63 -IS-TSNCRRQKMCQPVTAKGDTRSRHVAAKFDHC-DIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHE 139 (360)
Q Consensus 63 -v~-l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~-~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~ 139 (360)
++ +... +..+ +..|..|.|| ||+|+..|+. +++++|++.|++++. +|..|.||||+
T Consensus 255 ~~~~Ll~~-g~~v-n~~d~~g~Tp-Lh~Aa~~~~~~~iv~lLl~~gadin~------------------~d~~g~TpLh~ 313 (682)
T PHA02876 255 TSLLLYDA-GFSV-NSIDDCKNTP-LHHASQAPSLSRLVPKLLERGADVNA------------------KNIKGETPLYL 313 (682)
T ss_pred HHHHHHHC-CCCC-CCCCCCCCCH-HHHHHhCCCHHHHHHHHHHCCCCCCC------------------cCCCCCCHHHH
Confidence 22 3444 5667 7888899999 9999999986 588999999999888 88899999999
Q ss_pred hh-h------------------------cCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCccc
Q 039483 140 AY-N------------------------KIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCK 194 (360)
Q Consensus 140 a~-~------------------------~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~ 194 (360)
|+ + .||||.|+..+...++++.|++.|++++. +|..|.||||+|+..++.
T Consensus 314 Aa~~g~~~~~v~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~---~d~~G~TpLh~Aa~~~~~-- 388 (682)
T PHA02876 314 MAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNA---RDYCDKTPIHYAAVRNNV-- 388 (682)
T ss_pred HHHhCCCHHHHHHHHHcCCCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCcc---CCCCCCCHHHHHHHcCCH--
Confidence 88 2 69999999865338999999999999999 999999999999999999
Q ss_pred ccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCC-HHHHHHHHhcCCccccccccCCCCchhhhhhcCCc-cc
Q 039483 195 FNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRN-YLILKLILKIDRTAAKIADKDRKMTALHLVHGPKG-CQ 272 (360)
Q Consensus 195 ~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~-~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~-~~ 272 (360)
+++++|++.+ .+++..+..|.||||+|+..++ ..++++|++.|+++ +.+|. .|+||||+|+..+. .+
T Consensus 389 --------~iv~~Ll~~g-ad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadi-n~~d~-~G~TpLh~Aa~~~~~~~ 457 (682)
T PHA02876 389 --------VIINTLLDYG-ADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANV-NSKNK-DLSTPLHYACKKNCKLD 457 (682)
T ss_pred --------HHHHHHHHCC-CCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCC-CcCCC-CCChHHHHHHHhCCcHH
Confidence 9999999999 8899999999999999998776 56789999999999 99999 99999999998764 45
Q ss_pred -ccccc--cccCccCCCCCCcHHHHHHHcCCHHHHHHHhhh
Q 039483 273 -NNMLA--SSLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGR 310 (360)
Q Consensus 273 -~~~L~--~~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~ 310 (360)
+++|+ +++++.+|..|.||+++|+.++ ++++.|..+
T Consensus 458 iv~lLl~~Gad~n~~d~~g~tpl~~a~~~~--~~v~~Ll~~ 496 (682)
T PHA02876 458 VIEMLLDNGADVNAINIQNQYPLLIALEYH--GIVNILLHY 496 (682)
T ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHhC--CHHHHHHHC
Confidence 88888 4999999999999999999765 467766654
|
|
| >PHA02791 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-31 Score=242.06 Aligned_cols=189 Identities=15% Similarity=0.094 Sum_probs=171.0
Q ss_pred CCCCCCCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCC
Q 039483 75 QPVTAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEH 154 (360)
Q Consensus 75 ~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~ 154 (360)
+..|.+|.|| ||+|+..|+.+++++|++.|++++. .+ | .||||+|+..|+
T Consensus 24 ~~~D~~G~Tp-Lh~Aa~~g~~eiv~~Ll~~ga~~n~------------------~d--~---------~TpLh~Aa~~g~ 73 (284)
T PHA02791 24 FKADVHGHSA-LYYAIADNNVRLVCTLLNAGALKNL------------------LE--N---------EFPLHQAATLED 73 (284)
T ss_pred CCCCCCCCcH-HHHHHHcCCHHHHHHHHHCcCCCcC------------------CC--C---------CCHHHHHHHCCC
Confidence 4578899999 9999999999999999999998776 33 3 388899999999
Q ss_pred cHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCC-hHHHHHHHc
Q 039483 155 SSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWW-TPIHYAAYH 233 (360)
Q Consensus 155 ~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~-t~Lh~A~~~ 233 (360)
.+++++|++.|++++. +|..|+||||+|+..|+. +++++|++.+ .+++..+..|+ ||||+|+..
T Consensus 74 -~eiV~lLL~~Gadvn~---~d~~G~TpLh~Aa~~g~~----------eivk~Ll~~g-adin~~~~~g~~TpL~~Aa~~ 138 (284)
T PHA02791 74 -TKIVKILLFSGMDDSQ---FDDKGNTALYYAVDSGNM----------QTVKLFVKKN-WRLMFYGKTGWKTSFYHAVML 138 (284)
T ss_pred -HHHHHHHHHCCCCCCC---CCCCCCCHHHHHHHcCCH----------HHHHHHHHCC-CCcCccCCCCCcHHHHHHHHc
Confidence 9999999999999999 999999999999999999 9999999999 77888888885 899999999
Q ss_pred CCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-cccccc--ccCccCCCCCCcH-HHHHHHcCCHHHHHHHhh
Q 039483 234 RNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLAS--SLMDEGDAKGNTT-VHFFAAVHRKEIFDDLSG 309 (360)
Q Consensus 234 ~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~~--~~~~~~d~~g~Tp-l~~A~~~~~~~i~~~l~~ 309 (360)
|+.+++++|++++++. .+...|+||||+|+..++.+ +++|+. ++++.+|..|.|| ||+|++.|+.++++.|+.
T Consensus 139 g~~eivk~LL~~~~~~---~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~ 215 (284)
T PHA02791 139 NDVSIVSYFLSEIPST---FDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDLEMLQALFK 215 (284)
T ss_pred CCHHHHHHHHhcCCcc---cccccCccHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHH
Confidence 9999999999988654 23215899999999999999 899884 8999999999987 999999999999999998
Q ss_pred hh
Q 039483 310 RV 311 (360)
Q Consensus 310 ~~ 311 (360)
+.
T Consensus 216 ~G 217 (284)
T PHA02791 216 YD 217 (284)
T ss_pred CC
Confidence 85
|
|
| >PHA03095 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.8e-31 Score=260.93 Aligned_cols=223 Identities=16% Similarity=0.167 Sum_probs=201.7
Q ss_pred HHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcC---CHHHHHHHHHhcc
Q 039483 30 FKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFD---HCDIVSVLIERAK 106 (360)
Q Consensus 30 ~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g---~~~~v~~Ll~~g~ 106 (360)
..|+..++++.++.|++. +.++ +.++..|.|| ||+|+..| +.+++++|+++|+
T Consensus 19 ~~~~~~~~~~~v~~Ll~~----------------------ga~v-n~~~~~g~t~-Lh~a~~~~~~~~~~iv~~Ll~~Ga 74 (471)
T PHA03095 19 LLNASNVTVEEVRRLLAA----------------------GADV-NFRGEYGKTP-LHLYLHYSSEKVKDIVRLLLEAGA 74 (471)
T ss_pred HHcCCCCCHHHHHHHHHc----------------------CCCc-ccCCCCCCCH-HHHHHHhcCCChHHHHHHHHHCCC
Confidence 567888899999999874 7777 8899999999 99999999 9999999999999
Q ss_pred ccCcccccccccchhhHHHhhcccCCCCchHHHhh-h------------------------cCHHHHHH--hcCCcHHHH
Q 039483 107 LVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAY-N------------------------KIPLCMAA--EYEHSSHTV 159 (360)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~-~------------------------~t~L~~A~--~~g~~~~~~ 159 (360)
+++. ++..|.||||+|+ + .||||+|+ ..++ .+++
T Consensus 75 din~------------------~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~~~g~tpLh~a~~~~~~~-~~iv 135 (471)
T PHA03095 75 DVNA------------------PERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVYLSGFNIN-PKVI 135 (471)
T ss_pred CCCC------------------CCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhCCcCC-HHHH
Confidence 9998 8889999999998 2 89999999 5567 8999
Q ss_pred HHHHhhCCCCCccccCCCCCCcHHHHHHhcC--CcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHc--CC
Q 039483 160 VAILKSCTSVSHIYMKAPMERQALHAATMHI--DLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYH--RN 235 (360)
Q Consensus 160 ~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~--~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~--~~ 235 (360)
++|+++|++++. +|..|.||||+|+..+ +. +++++|++.+ .+++..|..|+||||+++.. ++
T Consensus 136 ~~Ll~~gad~~~---~d~~g~tpL~~a~~~~~~~~----------~iv~~Ll~~g-~~~~~~d~~g~t~Lh~~~~~~~~~ 201 (471)
T PHA03095 136 RLLLRKGADVNA---LDLYGMTPLAVLLKSRNANV----------ELLRLLIDAG-ADVYAVDDRFRSLLHHHLQSFKPR 201 (471)
T ss_pred HHHHHcCCCCCc---cCCCCCCHHHHHHHcCCCCH----------HHHHHHHHcC-CCCcccCCCCCCHHHHHHHHCCCc
Confidence 999999999999 9999999999998876 56 8999999999 77777899999999999975 67
Q ss_pred HHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc---ccccc--cccCccCCCCCCcHHHHHHHcCCHHHHHHHhhh
Q 039483 236 YLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ---NNMLA--SSLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGR 310 (360)
Q Consensus 236 ~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~---~~~L~--~~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~ 310 (360)
.++++.|++.|+++ +.+|. .|+||||+|+..+... ++.|+ +++++.+|..|+||||+|+..|+.++++.|+..
T Consensus 202 ~~i~~~Ll~~g~~~-~~~d~-~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~ 279 (471)
T PHA03095 202 ARIVRELIRAGCDP-AATDM-LGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIAL 279 (471)
T ss_pred HHHHHHHHHcCCCC-cccCC-CCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 89999999999999 99999 9999999999988765 55555 499999999999999999999999999999886
Q ss_pred h
Q 039483 311 V 311 (360)
Q Consensus 311 ~ 311 (360)
.
T Consensus 280 g 280 (471)
T PHA03095 280 G 280 (471)
T ss_pred C
Confidence 4
|
|
| >PHA02878 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=255.49 Aligned_cols=226 Identities=20% Similarity=0.175 Sum_probs=192.7
Q ss_pred HHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHhcccc
Q 039483 29 LFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIERAKLV 108 (360)
Q Consensus 29 L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~ 108 (360)
|+.+....+.+.+...++. ++.. +... +..+..+.|| ||+|+..|+.++|++|+++|+++
T Consensus 4 ~~~~~~~~~~~~i~~~i~~-~~~~-----------------~~~~-~~~~~~~~tP-Lh~A~~~g~~e~vk~Ll~~gadv 63 (477)
T PHA02878 4 LYKSMYTDNYETILKYIEY-IDHT-----------------ENYS-TSASLIPFIP-LHQAVEARNLDVVKSLLTRGHNV 63 (477)
T ss_pred HHHHHHhccHHHHHHHHHH-Hhhh-----------------hhhc-CcccccCcch-HHHHHHcCCHHHHHHHHHCCCCC
Confidence 7788888887667666663 3332 3333 4556678999 99999999999999999999999
Q ss_pred CcccccccccchhhHHHhhcccCCCCchHHHhh-h---------------------cCHHHHHHhcCCcHH---------
Q 039483 109 QHEDEELESGVGASRQMIRMTNKEKHTTLHEAY-N---------------------KIPLCMAAEYEHSSH--------- 157 (360)
Q Consensus 109 ~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~-~---------------------~t~L~~A~~~g~~~~--------- 157 (360)
+. +|..|.||||+|+ . .+|++.|+..++ .+
T Consensus 64 n~------------------~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~l~~a~~~~~-~ei~~~Ll~~~ 124 (477)
T PHA02878 64 NQ------------------PDHRDLTPLHIICKEPNKLGMKEMIRSINKCSVFYTLVAIKDAFNNRN-VEIFKIILTNR 124 (477)
T ss_pred CC------------------CCCCCCCHHHHHHHCccHhHHHHHHHHHhccccccchhhHHHHHHcCC-HHHHHHHHhCc
Confidence 98 8889999999987 2 567888877765 54
Q ss_pred ------------------------HHHHHHhhCCCCCccccCCCC-CCcHHHHHHhcCCcccccccCChHHHHHHHHhcC
Q 039483 158 ------------------------TVVAILKSCTSVSHIYMKAPM-ERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGK 212 (360)
Q Consensus 158 ------------------------~~~~Ll~~g~~~~~~~~~d~~-g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~ 212 (360)
++++|+++|++++. ++.. |.||||+|+..|+. +++++|++.+
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~---~~~~~g~tpLh~A~~~~~~----------~iv~~Ll~~g 191 (477)
T PHA02878 125 YKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADINM---KDRHKGNTALHYATENKDQ----------RLTELLLSYG 191 (477)
T ss_pred ccCcccCcHHHHhhccchhhHHHHHHHHHHHcCCCCCc---cCCCCCCCHHHHHHhCCCH----------HHHHHHHHCC
Confidence 56666777888888 8887 99999999999999 9999999999
Q ss_pred ccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhhhcC-Cccc-ccccc--cccCccCCC-C
Q 039483 213 KSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGP-KGCQ-NNMLA--SSLMDEGDA-K 287 (360)
Q Consensus 213 ~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~-~~~~-~~~L~--~~~~~~~d~-~ 287 (360)
++++..|..|+||||+|+..++.+++++|++.|+++ +.+|. .|+||||+|+.. ++.+ +++|+ +++++.++. .
T Consensus 192 -ad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~i-n~~d~-~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~ 268 (477)
T PHA02878 192 -ANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGAST-DARDK-CGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYIL 268 (477)
T ss_pred -CCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCC-CCCCC-CCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCC
Confidence 889999999999999999999999999999999999 99999 999999999975 5566 88888 488888886 7
Q ss_pred CCcHHHHHHHcCCHHHHHHHhhhh
Q 039483 288 GNTTVHFFAAVHRKEIFDDLSGRV 311 (360)
Q Consensus 288 g~Tpl~~A~~~~~~~i~~~l~~~~ 311 (360)
|.||||+| .++.++++.|+...
T Consensus 269 g~TpLh~A--~~~~~~v~~Ll~~g 290 (477)
T PHA02878 269 GLTALHSS--IKSERKLKLLLEYG 290 (477)
T ss_pred CCCHHHHH--ccCHHHHHHHHHCC
Confidence 99999999 57889999998874
|
|
| >KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-32 Score=217.94 Aligned_cols=175 Identities=20% Similarity=0.167 Sum_probs=158.7
Q ss_pred CCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHH
Q 039483 24 QIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIE 103 (360)
Q Consensus 24 ~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~ 103 (360)
-+.+|||+||..|..+++++|++. . ...+ +..|..|.|| ||+||..|+.++|+.|+.
T Consensus 37 D~Rt~LHwa~S~g~~eiv~fLlsq-~--------------------nv~~-ddkDdaGWtP-lhia~s~g~~evVk~Ll~ 93 (226)
T KOG4412|consen 37 DGRTPLHWACSFGHVEIVYFLLSQ-P--------------------NVKP-DDKDDAGWTP-LHIAASNGNDEVVKELLN 93 (226)
T ss_pred cCCceeeeeeecCchhHHHHHHhc-C--------------------CCCC-CCccccCCch-hhhhhhcCcHHHHHHHhc
Confidence 456899999999999999999871 1 3345 6779999999 999999999999999999
Q ss_pred h-ccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcH
Q 039483 104 R-AKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQA 182 (360)
Q Consensus 104 ~-g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~ 182 (360)
+ |++++. .+..|+ |+||+|+..|. .+++++|+.+|+.++. +|..|.||
T Consensus 94 r~~advna------------------~tn~G~---------T~LHyAagK~r-~eIaqlLle~ga~i~~---kD~~~qtp 142 (226)
T KOG4412|consen 94 RSGADVNA------------------TTNGGQ---------TCLHYAAGKGR-LEIAQLLLEKGALIRI---KDKQGQTP 142 (226)
T ss_pred CCCCCcce------------------ecCCCc---------ceehhhhcCCh-hhHHHHHHhcCCCCcc---cccccCch
Confidence 8 999998 888887 55556666788 9999999999999999 99999999
Q ss_pred HHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchh
Q 039483 183 LHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTAL 262 (360)
Q Consensus 183 Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpL 262 (360)
||.|+..|.. +++++|+..+ +.+|..|.+|+||||.|..-|+.+...+|++.|+++ +..|+ .| ||+
T Consensus 143 lHRAAavGkl----------kvie~Li~~~-a~~n~qDk~G~TpL~~al~e~~~d~a~lLV~~gAd~-~~edk-e~-t~~ 208 (226)
T KOG4412|consen 143 LHRAAAVGKL----------KVIEYLISQG-APLNTQDKYGFTPLHHALAEGHPDVAVLLVRAGADT-DREDK-EG-TAL 208 (226)
T ss_pred hHHHHhccch----------hhHHHHHhcC-CCCCcccccCccHHHHHHhccCchHHHHHHHhccce-eeccc-cC-chH
Confidence 9999999999 9999999999 889999999999999999999999999999999999 99999 88 998
Q ss_pred hhhh
Q 039483 263 HLVH 266 (360)
Q Consensus 263 h~A~ 266 (360)
-.|.
T Consensus 209 ~~a~ 212 (226)
T KOG4412|consen 209 RIAC 212 (226)
T ss_pred HHHH
Confidence 7763
|
|
| >KOG0510 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=250.89 Aligned_cols=251 Identities=18% Similarity=0.191 Sum_probs=212.3
Q ss_pred CCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCc----------ccccc-ccccccccccCCCCCCCCChHHHHHHh
Q 039483 23 PQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRT----------QSCIS-TSNCRRQKMCQPVTAKGDTRSRHVAAK 91 (360)
Q Consensus 23 ~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t----------~~~v~-l~~~~~~~~~~~~~~~g~tp~Lh~A~~ 91 (360)
..+++++|.|+..|-+ +.+......-+..+++ .+.++ +... +++. ...|..+.+| +|+|+.
T Consensus 59 ~~gd~~~~~~~~~~y~-----~~~~~~~~a~D~~~n~~l~~a~~~~~~~~i~~Lls~-gad~-~~~n~~~~ap-lh~A~~ 130 (929)
T KOG0510|consen 59 AFGDTELHHASARNYI-----LSKLAISYAKDSADNTPLHAAVEYNQGDKIQVLLSY-GADT-PLRNLNKNAP-LHLAAD 130 (929)
T ss_pred hhchhHHHHHHhhcch-----hhhhhhhhhhhcccCchhHHHhhcchHHHHHHHHhc-CCCC-ChhhhhccCc-hhhccc
Confidence 4577888888887743 1110000001122222 56667 7777 8888 8899999999 999999
Q ss_pred cCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhh--h----------------------cCHHH
Q 039483 92 FDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAY--N----------------------KIPLC 147 (360)
Q Consensus 92 ~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~--~----------------------~t~L~ 147 (360)
.|+.++.+.|+++|++++. .|+.|.||||.|+ + .+|+|
T Consensus 131 ~~~~s~L~~Ll~~~~dvnl------------------~de~~~TpLh~A~~~~~~E~~k~Li~~~a~~~K~~~~~~~~iH 192 (929)
T KOG0510|consen 131 SGNYSCLKLLLDYGADVNL------------------EDENGFTPLHLAARKNKVEAKKELINKGADPCKSDIDGNFPIH 192 (929)
T ss_pred cchHHHHHHHHHhcCCccc------------------cccCCCchhhHHHhcChHHHHHHHHhcCCCCCcccCcCCchHH
Confidence 9999999999999999988 9999999999998 2 89999
Q ss_pred HHHhcCCcHHHHHHHHh-----hCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccc-------
Q 039483 148 MAAEYEHSSHTVVAILK-----SCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSM------- 215 (360)
Q Consensus 148 ~A~~~g~~~~~~~~Ll~-----~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~------- 215 (360)
.|++.|. .++.+.++. .+..++. -++.+.+|||.|+..|+. ++++.++..+...
T Consensus 193 ~aa~s~s-~e~mEi~l~~~g~~r~~~in~---~~n~~~~pLhlAve~g~~----------e~lk~~L~n~~~~a~~~~~~ 258 (929)
T KOG0510|consen 193 EAARSGS-KECMEIFLPEHGYERQTHINF---DNNEKATPLHLAVEGGDI----------EMLKMCLQNGKKIADVQLDA 258 (929)
T ss_pred HHHHhcc-hhhhhhhhccccchhhccccc---ccCCCCcchhhhhhcCCH----------HHHHHHHhCccccchhhhHH
Confidence 9999999 999999998 5677888 889999999999999999 9999999887443
Q ss_pred -------cccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-cccccc----ccCcc
Q 039483 216 -------IKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLAS----SLMDE 283 (360)
Q Consensus 216 -------i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~~----~~~~~ 283 (360)
++..|.+|.||||+|++.|+++++..|+..|+++ +.+++ ++.||||.|+..|+.. ++.|++ ...+.
T Consensus 259 ~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I-~~kn~-d~~spLH~AA~yg~~ntv~rLL~~~~~rllne 336 (929)
T KOG0510|consen 259 MQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASI-NSKNK-DEESPLHFAAIYGRINTVERLLQESDTRLLNE 336 (929)
T ss_pred HHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcc-cccCC-CCCCchHHHHHcccHHHHHHHHhCcCcccccc
Confidence 4556899999999999999999999999999999 99999 9999999999999999 777774 78889
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHhhhhcccc
Q 039483 284 GDAKGNTTVHFFAAVHRKEIFDDLSGRVKATM 315 (360)
Q Consensus 284 ~d~~g~Tpl~~A~~~~~~~i~~~l~~~~~~~~ 315 (360)
.|-.|.||||+|++.|+..+++.|+.|...+.
T Consensus 337 ~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~ 368 (929)
T KOG0510|consen 337 SDLHGMTPLHLAAKSGHDRVVQLLLNKGALFL 368 (929)
T ss_pred ccccCCCchhhhhhcCHHHHHHHHHhcChhhh
Confidence 99999999999999999999999999854443
|
|
| >PHA03100 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.7e-30 Score=250.91 Aligned_cols=202 Identities=21% Similarity=0.195 Sum_probs=171.7
Q ss_pred CCCCCCCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHH-----hh-h------
Q 039483 75 QPVTAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHE-----AY-N------ 142 (360)
Q Consensus 75 ~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~-----a~-~------ 142 (360)
+..+..|.|| ||+|+..|+.++|++|+++|++++. .+..|.||||+ |+ +
T Consensus 29 ~~~~~~~~t~-L~~A~~~~~~~ivk~Ll~~g~~~~~------------------~~~~~~t~L~~~~~~~a~~~~~~~iv 89 (480)
T PHA03100 29 DYSYKKPVLP-LYLAKEARNIDVVKILLDNGADINS------------------STKNNSTPLHYLSNIKYNLTDVKEIV 89 (480)
T ss_pred hhhhcccchh-hhhhhccCCHHHHHHHHHcCCCCCC------------------ccccCcCHHHHHHHHHHHhhchHHHH
Confidence 4445555666 6666666666666666666666555 45555555555 44 1
Q ss_pred -----------------cCHHHHHH--hcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcC--CcccccccCCh
Q 039483 143 -----------------KIPLCMAA--EYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHI--DLCKFNHTLSN 201 (360)
Q Consensus 143 -----------------~t~L~~A~--~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~--~~~~~~~~~~~ 201 (360)
.||||+|+ ..|+ .+++++|+++|++++. .+..|.||||+|+..+ +.
T Consensus 90 ~~Ll~~ga~i~~~d~~g~tpL~~A~~~~~~~-~~iv~~Ll~~g~~~~~---~~~~g~t~L~~A~~~~~~~~--------- 156 (480)
T PHA03100 90 KLLLEYGANVNAPDNNGITPLLYAISKKSNS-YSIVEYLLDNGANVNI---KNSDGENLLHLYLESNKIDL--------- 156 (480)
T ss_pred HHHHHCCCCCCCCCCCCCchhhHHHhcccCh-HHHHHHHHHcCCCCCc---cCCCCCcHHHHHHHcCCChH---------
Confidence 58899999 9999 9999999999999999 9999999999999999 89
Q ss_pred HHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCC------CchhhhhhcCCc--cc-
Q 039483 202 DCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRK------MTALHLVHGPKG--CQ- 272 (360)
Q Consensus 202 ~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g------~tpLh~A~~~~~--~~- 272 (360)
+++++|++.+ .+++..+..|.||||+|+..|+.+++++|+++|+++ +..+. .| .||||.|+..++ .+
T Consensus 157 -~iv~~Ll~~g-~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~-~~~~~-~~~~~~~~~t~l~~a~~~~~~~~~i 232 (480)
T PHA03100 157 -KILKLLIDKG-VDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADI-NAGDI-ETLLFTIFETPLHIAACYNEITLEV 232 (480)
T ss_pred -HHHHHHHHCC-CCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCc-cCCCC-CCCcHHHHHhHHHHHHHhCcCcHHH
Confidence 9999999999 889999999999999999999999999999999999 88888 88 899999999998 66
Q ss_pred cccccc--ccCccCCCCCCcHHHHHHHcCCHHHHHHHhhhhc
Q 039483 273 NNMLAS--SLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGRVK 312 (360)
Q Consensus 273 ~~~L~~--~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~~~ 312 (360)
+++|+. ++++.+|..|+||||+|+..|+.++++.|+....
T Consensus 233 v~~Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga 274 (480)
T PHA03100 233 VNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGA 274 (480)
T ss_pred HHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 888884 8999999999999999999999999999998753
|
|
| >PHA02875 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-29 Score=240.84 Aligned_cols=221 Identities=15% Similarity=0.120 Sum_probs=191.6
Q ss_pred CCCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHH
Q 039483 22 QPQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVL 101 (360)
Q Consensus 22 ~~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~L 101 (360)
...+.+|||.|+..|+.++++.|++. +..+ +..+..+.|| ||.|+..|+.+++++|
T Consensus 32 ~~~g~tpL~~A~~~~~~~~v~~Ll~~----------------------ga~~-~~~~~~~~t~-L~~A~~~g~~~~v~~L 87 (413)
T PHA02875 32 IYDGISPIKLAMKFRDSEAIKLLMKH----------------------GAIP-DVKYPDIESE-LHDAVEEGDVKAVEEL 87 (413)
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhC----------------------CCCc-cccCCCcccH-HHHHHHCCCHHHHHHH
Confidence 44688999999999999999999884 5555 6777889999 9999999999999999
Q ss_pred HHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCc
Q 039483 102 IERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQ 181 (360)
Q Consensus 102 l~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t 181 (360)
++.|++.+. ..+..|. ||||+|+..|+ .+++++|+++|++++. ++..|.|
T Consensus 88 l~~~~~~~~-----------------~~~~~g~---------tpL~~A~~~~~-~~iv~~Ll~~gad~~~---~~~~g~t 137 (413)
T PHA02875 88 LDLGKFADD-----------------VFYKDGM---------TPLHLATILKK-LDIMKLLIARGADPDI---PNTDKFS 137 (413)
T ss_pred HHcCCcccc-----------------cccCCCC---------CHHHHHHHhCC-HHHHHHHHhCCCCCCC---CCCCCCC
Confidence 999987654 2455664 88888899999 9999999999999999 9999999
Q ss_pred HHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCC-Cc
Q 039483 182 ALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRK-MT 260 (360)
Q Consensus 182 ~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g-~t 260 (360)
|||+|+..|+. +++++|++++ .+++.+|..|+||||+|+..|+.+++++|++.|+++ +..+. .| .|
T Consensus 138 pLh~A~~~~~~----------~~v~~Ll~~g-~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~-n~~~~-~~~~t 204 (413)
T PHA02875 138 PLHLAVMMGDI----------KGIELLIDHK-ACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANI-DYFGK-NGCVA 204 (413)
T ss_pred HHHHHHHcCCH----------HHHHHHHhcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CcCCC-CCCch
Confidence 99999999999 9999999999 788999999999999999999999999999999999 88888 65 58
Q ss_pred hhhhhhcCCccc-cccccc--ccCccC---CCCCCcHHHHHHHcC---CHHHHHHHhh
Q 039483 261 ALHLVHGPKGCQ-NNMLAS--SLMDEG---DAKGNTTVHFFAAVH---RKEIFDDLSG 309 (360)
Q Consensus 261 pLh~A~~~~~~~-~~~L~~--~~~~~~---d~~g~Tpl~~A~~~~---~~~i~~~l~~ 309 (360)
|+|+|+..++.+ +++|+. ++++.. +..|.||++++.... ..+.++.+..
T Consensus 205 ~l~~A~~~~~~~iv~~Ll~~gad~n~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~li~ 262 (413)
T PHA02875 205 ALCYAIENNKIDIVRLFIKRGADCNIMFMIEGEECTILDMICNMCTNLESEAIDALIA 262 (413)
T ss_pred HHHHHHHcCCHHHHHHHHHCCcCcchHhhcCCCchHHHHHHHhhcCCcccHHHHHHHH
Confidence 999999999999 999984 776654 677999999876533 3455554443
|
|
| >PHA02989 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-29 Score=246.49 Aligned_cols=242 Identities=11% Similarity=0.067 Sum_probs=192.2
Q ss_pred CCCCHHHHHHHHcC--ChHHHHHHHHHHHhhhhcccCCc----------------ccccc-ccccccccccCCCCCCCCC
Q 039483 23 PQIDPNLFKVAAAG--NLEPFKDMAREVIESLLTARSRT----------------QSCIS-TSNCRRQKMCQPVTAKGDT 83 (360)
Q Consensus 23 ~~~~~~L~~Aa~~G--~~~~~~~ll~~~~~~~~~~~~~t----------------~~~v~-l~~~~~~~~~~~~~~~g~t 83 (360)
..+.++||.++..+ +.++++.|++.+.+......+.| .++++ |.+. ++++ +.+|..|.|
T Consensus 33 ~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~~~~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~-Gadi-n~~d~~g~t 110 (494)
T PHA02989 33 YRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKGYIETPLCAVLRNREITSNKIKKIVKLLLKF-GADI-NLKTFNGVS 110 (494)
T ss_pred cCCCCHHHHHHhcCCCChHHHHHHHHcCCCccCCCCCCCcHHHHHhccCcchhhHHHHHHHHHHC-CCCC-CCCCCCCCc
Confidence 34667777655543 68999999995333211112222 24566 7788 8899 999999999
Q ss_pred hHHHHHHhc---CCHHHHHHHHHhcccc-CcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHh--cCCcHH
Q 039483 84 RSRHVAAKF---DHCDIVSVLIERAKLV-QHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAE--YEHSSH 157 (360)
Q Consensus 84 p~Lh~A~~~---g~~~~v~~Ll~~g~~~-~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~--~g~~~~ 157 (360)
| ||.|+.. |+.+++++|+++|+++ +. +|..|. ||||+|+. .++ .+
T Consensus 111 p-L~~a~~~~~~~~~eiv~~Ll~~Gadin~~------------------~d~~g~---------tpLh~a~~~~~~~-~~ 161 (494)
T PHA02989 111 P-IVCFIYNSNINNCDMLRFLLSKGINVNDV------------------KNSRGY---------NLLHMYLESFSVK-KD 161 (494)
T ss_pred H-HHHHHHhcccCcHHHHHHHHHCCCCcccc------------------cCCCCC---------CHHHHHHHhccCC-HH
Confidence 9 9987755 6789999999999988 55 788886 45555443 357 89
Q ss_pred HHHHHHhhCCCCCccccCCCCCCcHHHHHHhcC----CcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHc
Q 039483 158 TVVAILKSCTSVSHIYMKAPMERQALHAATMHI----DLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYH 233 (360)
Q Consensus 158 ~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~----~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~ 233 (360)
++++|+++|++++. ..+..|.||||+|+..+ +. +++++|++.| ++++..+..+.|+||.++..
T Consensus 162 iv~~Ll~~Gadi~~--~~~~~g~tpL~~a~~~~~~~~~~----------~iv~~Ll~~G-a~vn~~~~~~~t~l~~~~~~ 228 (494)
T PHA02989 162 VIKILLSFGVNLFE--KTSLYGLTPMNIYLRNDIDVISI----------KVIKYLIKKG-VNIETNNNGSESVLESFLDN 228 (494)
T ss_pred HHHHHHHcCCCccc--cccccCCChHHHHHhcccccccH----------HHHHHHHhCC-CCccccCCccccHHHHHHHh
Confidence 99999999999876 13668999999987654 77 9999999999 88898888899999987754
Q ss_pred C------CHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-ccccc--cccCccCCCCCCcHHHHHHHcCCHHHH
Q 039483 234 R------NYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLA--SSLMDEGDAKGNTTVHFFAAVHRKEIF 304 (360)
Q Consensus 234 ~------~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~--~~~~~~~d~~g~Tpl~~A~~~~~~~i~ 304 (360)
+ ..+++++|+. |+++ +.+|. .|+||||+|+..++.+ +++|+ +++++.+|..|+||||+|++.++.+++
T Consensus 229 ~~~~~~~~~~il~~l~~-~adv-n~~d~-~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~~~iv 305 (494)
T PHA02989 229 NKILSKKEFKVLNFILK-YIKI-NKKDK-KGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDML 305 (494)
T ss_pred chhhcccchHHHHHHHh-CCCC-CCCCC-CCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHH
Confidence 3 4677777655 6899 99999 9999999999999988 88888 499999999999999999999999999
Q ss_pred HHHhhhh
Q 039483 305 DDLSGRV 311 (360)
Q Consensus 305 ~~l~~~~ 311 (360)
+.|+++.
T Consensus 306 ~~LL~~~ 312 (494)
T PHA02989 306 NRILQLK 312 (494)
T ss_pred HHHHhcC
Confidence 9998864
|
|
| >PHA02798 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.2e-29 Score=243.73 Aligned_cols=197 Identities=14% Similarity=0.085 Sum_probs=164.4
Q ss_pred cccccCCCCCCCCChHHHHHHhc-----CCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcC
Q 039483 70 RQKMCQPVTAKGDTRSRHVAAKF-----DHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKI 144 (360)
Q Consensus 70 ~~~~~~~~~~~g~tp~Lh~A~~~-----g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t 144 (360)
+.++ +.+|..|.|| ||.|+.. ++.+++++|+++|++++. +|..|.||||
T Consensus 61 Gadv-n~~d~~g~Tp-L~~~~~n~~~~~~~~~iv~~Ll~~GadiN~------------------~d~~G~TpLh------ 114 (489)
T PHA02798 61 GANV-NGLDNEYSTP-LCTILSNIKDYKHMLDIVKILIENGADINK------------------KNSDGETPLY------ 114 (489)
T ss_pred CCCC-CCCCCCCCCh-HHHHHHhHHhHHhHHHHHHHHHHCCCCCCC------------------CCCCcCcHHH------
Confidence 7888 8899999999 9998864 678999999999999998 8888875554
Q ss_pred HHHHHHhc---CCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCC---cccccccCChHHHHHHHHhcCcccccc
Q 039483 145 PLCMAAEY---EHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHID---LCKFNHTLSNDCAVQQLFEGKKSMIKG 218 (360)
Q Consensus 145 ~L~~A~~~---g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~---~~~~~~~~~~~~~~~~Ll~~~~~~i~~ 218 (360)
.|+.. ++ .+++++|+++|++++. +|..|.||||+|+..++ . +++++|++.+ .+++.
T Consensus 115 ---~a~~~~~~~~-~~iv~~Ll~~Gadvn~---~d~~g~tpL~~a~~~~~~~~~----------~vv~~Ll~~g-adin~ 176 (489)
T PHA02798 115 ---CLLSNGYINN-LEILLFMIENGADTTL---LDKDGFTMLQVYLQSNHHIDI----------EIIKLLLEKG-VDINT 176 (489)
T ss_pred ---HHHHcCCcCh-HHHHHHHHHcCCCccc---cCCCCCcHHHHHHHcCCcchH----------HHHHHHHHhC-CCccc
Confidence 44444 36 8899999999999988 88899999999998887 7 8899999888 77777
Q ss_pred cc-CCCChHHHHHHHcC----CHHHHHHHHhcCCccc--------------------------------------ccccc
Q 039483 219 ID-QCWWTPIHYAAYHR----NYLILKLILKIDRTAA--------------------------------------KIADK 255 (360)
Q Consensus 219 ~d-~~g~t~Lh~A~~~~----~~~~v~~Ll~~g~~~~--------------------------------------~~~d~ 255 (360)
.+ ..|.||||.++..+ +.+++++|+++|+++. +.+|.
T Consensus 177 ~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~ 256 (489)
T PHA02798 177 HNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDE 256 (489)
T ss_pred ccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCc
Confidence 64 57888999887643 6788888887775430 45677
Q ss_pred CCCCchhhhhhcCCccc-ccccc--cccCccCCCCCCcHHHHHHHcCCHHHHHHHhhhh
Q 039483 256 DRKMTALHLVHGPKGCQ-NNMLA--SSLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGRV 311 (360)
Q Consensus 256 ~~g~tpLh~A~~~~~~~-~~~L~--~~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~~ 311 (360)
.|+||||+|+..++.+ +++|+ +++++.+|..|+||||+|++.++.++++.++++.
T Consensus 257 -~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~d~~G~TpL~~A~~~~~~~iv~~lL~~~ 314 (489)
T PHA02798 257 -LGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELGNTCLFTAFENESKFIFNSILNKK 314 (489)
T ss_pred -CCccHHHHHHHcCcHHHHHHHHHcCCcccccCCCCCcHHHHHHHcCcHHHHHHHHccC
Confidence 8999999999999888 88888 5999999999999999999999999999888764
|
|
| >PHA02716 CPXV016; CPX019; EVM010; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-28 Score=243.75 Aligned_cols=205 Identities=16% Similarity=0.091 Sum_probs=169.2
Q ss_pred ccccc-cccccc-ccccCCC-CCCCCChHHHHHHh--cCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCC
Q 039483 60 QSCIS-TSNCRR-QKMCQPV-TAKGDTRSRHVAAK--FDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKH 134 (360)
Q Consensus 60 ~~~v~-l~~~~~-~~~~~~~-~~~g~tp~Lh~A~~--~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~ 134 (360)
.++++ |.+. + .++ +.+ |..|.|| ||.|+. +++.+++++|+++|++++. +|..|.
T Consensus 155 leiVk~LLe~-G~ADI-N~~~d~~G~Tp-LH~A~~n~~~~~eIVklLLe~GADVN~------------------kD~~G~ 213 (764)
T PHA02716 155 LDLIKYMVDV-GIVNL-NYVCKKTGYGI-LHAYLGNMYVDIDILEWLCNNGVNVNL------------------QNNHLI 213 (764)
T ss_pred HHHHHHHHHC-CCCCc-ccccCCCCCcH-HHHHHHhccCCHHHHHHHHHcCCCCCC------------------CCCCCC
Confidence 34444 3334 6 788 887 8899999 999864 4679999999999999998 888886
Q ss_pred chHHHhhhcCHHHHHHhcCC-cHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHh-------------------------
Q 039483 135 TTLHEAYNKIPLCMAAEYEH-SSHTVVAILKSCTSVSHIYMKAPMERQALHAATM------------------------- 188 (360)
Q Consensus 135 t~Lh~a~~~t~L~~A~~~g~-~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~------------------------- 188 (360)
||||+|+..|+ ..+++++|+++|++++. +|..|.||||+|+.
T Consensus 214 ---------TPLH~Aa~~g~~~~eIVklLLe~GADVN~---kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~ 281 (764)
T PHA02716 214 ---------TPLHTYLITGNVCASVIKKIIELGGDMDM---KCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNI 281 (764)
T ss_pred ---------CHHHHHHHcCCCCHHHHHHHHHcCCCCCC---CCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccc
Confidence 77777787875 15899999999999999 99999999998643
Q ss_pred ------------cCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHH--cCCHHHHHHHHhcCCccccccc
Q 039483 189 ------------HIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAY--HRNYLILKLILKIDRTAAKIAD 254 (360)
Q Consensus 189 ------------~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~--~~~~~~v~~Ll~~g~~~~~~~d 254 (360)
.|+. +++++|++.+ ++++.+|..|+||||+|+. .++.+++++|++.|+++ +.+|
T Consensus 282 ~~~L~~~i~AA~~g~l----------eiVklLLe~G-AdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADI-N~kD 349 (764)
T PHA02716 282 PMILHSYITLARNIDI----------SVVYSFLQPG-VKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDL-NEPD 349 (764)
T ss_pred hhhhHHHHHHHHcCCH----------HHHHHHHhCC-CceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCC-ccCC
Confidence 2334 8899999998 7899999999999999864 46799999999999999 9999
Q ss_pred cCCCCchhhhhhcC--------------Cccc-ccccc--cccCccCCCCCCcHHHH----HHHcCCHHHHHHHhhh
Q 039483 255 KDRKMTALHLVHGP--------------KGCQ-NNMLA--SSLMDEGDAKGNTTVHF----FAAVHRKEIFDDLSGR 310 (360)
Q Consensus 255 ~~~g~tpLh~A~~~--------------~~~~-~~~L~--~~~~~~~d~~g~Tpl~~----A~~~~~~~i~~~l~~~ 310 (360)
. .|+||||+|+.. ++.+ +++|+ +++++.+|..|+||||. |...++.++++.|...
T Consensus 350 ~-~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~ 425 (764)
T PHA02716 350 N-IGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISD 425 (764)
T ss_pred C-CCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCCCCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhC
Confidence 9 999999998642 3445 88888 49999999999999994 3335778999988774
|
|
| >PHA02989 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-28 Score=239.36 Aligned_cols=234 Identities=11% Similarity=0.045 Sum_probs=183.9
Q ss_pred HcCChHHHHHHHHHHHhhhhcccCCc------------ccccc-ccccccccccCCCCCCCCChHHHHHHhcC------C
Q 039483 34 AAGNLEPFKDMAREVIESLLTARSRT------------QSCIS-TSNCRRQKMCQPVTAKGDTRSRHVAAKFD------H 94 (360)
Q Consensus 34 ~~G~~~~~~~ll~~~~~~~~~~~~~t------------~~~v~-l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g------~ 94 (360)
...+.+.++.|++.+.+......+.+ .++++ |.+. ++++ +.++ .+.|| ||.|+..+ +
T Consensus 12 ~~~~~~~v~~LL~~GadvN~~~~g~t~l~~~~~~~~~~~~iv~~Ll~~-GAdv-n~~~-~~~tp-L~~a~~~~~~~~~~~ 87 (494)
T PHA02989 12 DTVDKNALEFLLRTGFDVNEEYRGNSILLLYLKRKDVKIKIVKLLIDN-GADV-NYKG-YIETP-LCAVLRNREITSNKI 87 (494)
T ss_pred CcCcHHHHHHHHHcCCCcccccCCCCHHHHHHhcCCCChHHHHHHHHc-CCCc-cCCC-CCCCc-HHHHHhccCcchhhH
Confidence 35789999999985333221122333 45666 7777 8888 7665 56788 88777644 4
Q ss_pred HHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCC-Cccc
Q 039483 95 CDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSV-SHIY 173 (360)
Q Consensus 95 ~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~-~~~~ 173 (360)
.+++++|+++|++++. +|..|.||||.|+ .++..|+ .+++++|+++|+++ +.
T Consensus 88 ~~iv~~Ll~~Gadin~------------------~d~~g~tpL~~a~------~~~~~~~-~eiv~~Ll~~Gadin~~-- 140 (494)
T PHA02989 88 KKIVKLLLKFGADINL------------------KTFNGVSPIVCFI------YNSNINN-CDMLRFLLSKGINVNDV-- 140 (494)
T ss_pred HHHHHHHHHCCCCCCC------------------CCCCCCcHHHHHH------HhcccCc-HHHHHHHHHCCCCcccc--
Confidence 6788888888888877 7888876665542 2233467 99999999999999 77
Q ss_pred cCCCCCCcHHHHHHhc--CCcccccccCChHHHHHHHHhcCcccccc-ccCCCChHHHHHHHcC----CHHHHHHHHhcC
Q 039483 174 MKAPMERQALHAATMH--IDLCKFNHTLSNDCAVQQLFEGKKSMIKG-IDQCWWTPIHYAAYHR----NYLILKLILKID 246 (360)
Q Consensus 174 ~~d~~g~t~Lh~A~~~--~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~-~d~~g~t~Lh~A~~~~----~~~~v~~Ll~~g 246 (360)
+|..|.||||+|+.. ++. +++++|+++| ++++. .+..|.||||+|+..+ +.+++++|++.|
T Consensus 141 -~d~~g~tpLh~a~~~~~~~~----------~iv~~Ll~~G-adi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~G 208 (494)
T PHA02989 141 -KNSRGYNLLHMYLESFSVKK----------DVIKILLSFG-VNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKG 208 (494)
T ss_pred -cCCCCCCHHHHHHHhccCCH----------HHHHHHHHcC-CCccccccccCCChHHHHHhcccccccHHHHHHHHhCC
Confidence 899999999998765 578 9999999999 77877 6789999999998765 899999999999
Q ss_pred CccccccccCCCCchhhhhhcCCc------cc-ccccc-cccCccCCCCCCcHHHHHHHcCCHHHHHHHhhhhc
Q 039483 247 RTAAKIADKDRKMTALHLVHGPKG------CQ-NNMLA-SSLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGRVK 312 (360)
Q Consensus 247 ~~~~~~~d~~~g~tpLh~A~~~~~------~~-~~~L~-~~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~~~ 312 (360)
+++ +.++. .|.||||.+...+. .+ +++|. +++++.+|..|+||||+|+..++.++++.|++...
T Consensus 209 a~v-n~~~~-~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Ga 280 (494)
T PHA02989 209 VNI-ETNNN-GSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGD 280 (494)
T ss_pred CCc-cccCC-ccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCC
Confidence 999 99998 99999998765432 12 44455 49999999999999999999999999999998743
|
|
| >PHA02859 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-27 Score=207.52 Aligned_cols=175 Identities=13% Similarity=0.121 Sum_probs=145.4
Q ss_pred CCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcC--CHHHHHH
Q 039483 23 PQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFD--HCDIVSV 100 (360)
Q Consensus 23 ~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g--~~~~v~~ 100 (360)
....+|||.|++.|+++.++.|++. + +..|..|.|| ||+|+..+ +.+++++
T Consensus 19 ~~~~~pL~~A~~~~~~~~vk~Li~~-------------------------~-n~~~~~g~Tp-Lh~a~~~~~~~~eiv~~ 71 (209)
T PHA02859 19 YRYCNPLFYYVEKDDIEGVKKWIKF-------------------------V-NDCNDLYETP-IFSCLEKDKVNVEILKF 71 (209)
T ss_pred hccCcHHHHHHHhCcHHHHHHHHHh-------------------------h-hccCccCCCH-HHHHHHcCCCCHHHHHH
Confidence 4457889999999999999999762 2 4567789999 99998754 8999999
Q ss_pred HHHhccccCcccccccccchhhHHHhhccc-CCCCchHHHhhhcCHHHHHHh---cCCcHHHHHHHHhhCCCCCccccCC
Q 039483 101 LIERAKLVQHEDEELESGVGASRQMIRMTN-KEKHTTLHEAYNKIPLCMAAE---YEHSSHTVVAILKSCTSVSHIYMKA 176 (360)
Q Consensus 101 Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d-~~g~t~Lh~a~~~t~L~~A~~---~g~~~~~~~~Ll~~g~~~~~~~~~d 176 (360)
|+++|++++. ++ ..|. ||||+|+. .++ .+++++|+++|++++. +|
T Consensus 72 Ll~~gadvn~------------------~~~~~g~---------TpLh~a~~~~~~~~-~eiv~~Ll~~gadin~---~d 120 (209)
T PHA02859 72 LIENGADVNF------------------KTRDNNL---------SALHHYLSFNKNVE-PEILKILIDSGSSITE---ED 120 (209)
T ss_pred HHHCCCCCCc------------------cCCCCCC---------CHHHHHHHhCcccc-HHHHHHHHHCCCCCCC---cC
Confidence 9999999987 54 4676 55555443 346 8999999999999998 99
Q ss_pred CCCCcHHHHHHhc--CCcccccccCChHHHHHHHHhcCccccccccCCCChHHHH-HHHcCCHHHHHHHHhcCCcccccc
Q 039483 177 PMERQALHAATMH--IDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHY-AAYHRNYLILKLILKIDRTAAKIA 253 (360)
Q Consensus 177 ~~g~t~Lh~A~~~--~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~-A~~~~~~~~v~~Ll~~g~~~~~~~ 253 (360)
..|.||||+|+.. ++. +++++|++.+ .+++.+|..|.||||. |+..++.+++++|++.|+++ +.+
T Consensus 121 ~~G~TpLh~a~~~~~~~~----------~iv~~Li~~g-adin~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi-~~~ 188 (209)
T PHA02859 121 EDGKNLLHMYMCNFNVRI----------NVIKLLIDSG-VSFLNKDFDNNNILYSYILFHSDKKIFDFLTSLGIDI-NET 188 (209)
T ss_pred CCCCCHHHHHHHhccCCH----------HHHHHHHHcC-CCcccccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCC-CCC
Confidence 9999999988763 578 9999999998 8889999999999995 55678899999999999999 999
Q ss_pred ccCCCCchhhhhhcC
Q 039483 254 DKDRKMTALHLVHGP 268 (360)
Q Consensus 254 d~~~g~tpLh~A~~~ 268 (360)
|. .|+||||+|...
T Consensus 189 d~-~g~tpl~la~~~ 202 (209)
T PHA02859 189 NK-SGYNCYDLIKFR 202 (209)
T ss_pred CC-CCCCHHHHHhhh
Confidence 98 999999998654
|
|
| >PHA02730 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-27 Score=232.24 Aligned_cols=272 Identities=10% Similarity=0.004 Sum_probs=207.6
Q ss_pred CCCCCCCHHHHHHHHcC--ChHHHHHHHHHHHhhhhc--c---cCC----------cccccc-ccc-cccccccCCCC--
Q 039483 20 TSQPQIDPNLFKVAAAG--NLEPFKDMAREVIESLLT--A---RSR----------TQSCIS-TSN-CRRQKMCQPVT-- 78 (360)
Q Consensus 20 ~~~~~~~~~L~~Aa~~G--~~~~~~~ll~~~~~~~~~--~---~~~----------t~~~v~-l~~-~~~~~~~~~~~-- 78 (360)
.....+.||||.|+.+| +.++++.|++...+...+ . ++. ..++++ |.. . +.++ +...
T Consensus 72 ~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~-~~~~-~~~~~~ 149 (672)
T PHA02730 72 CRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTSNINDFDLYSYMSSDNIDLRLLKYLIVDK-RIRP-SKNTNY 149 (672)
T ss_pred ccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccccccCCchHHHHHHhcCCcHHHHHHHHHhc-CCCh-hhhhhh
Confidence 34567889999999877 789999999853322111 1 111 157777 654 4 5555 5443
Q ss_pred ---CCCCChHHHHHHhcCCHHHHHHHHHhccccC-------cccccccc----------------cchhhHHH------h
Q 039483 79 ---AKGDTRSRHVAAKFDHCDIVSVLIERAKLVQ-------HEDEELES----------------GVGASRQM------I 126 (360)
Q Consensus 79 ---~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~-------~~~~~~~~----------------~~~~~~~~------l 126 (360)
..|.+| +++|+..++.++|++|+++|++++ ..|....+ ..++++.+ +
T Consensus 150 ~~~~~~~~~-~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~~~~~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadI 228 (672)
T PHA02730 150 YIHCLGLVD-IYVTTPNPRPEVLLWLLKSECYSTGYVFRSCMYDSDRCKNSLHYYILSHRESESLSKDVIKCLIDNNVSI 228 (672)
T ss_pred hccccchhh-hhHhcCCCchHHHHHHHHcCCcccccccccccccCCccchhHHHHHHhhhhhhccCHHHHHHHHHCCCCC
Confidence 278999 999999999999999999999995 12223331 13344444 7
Q ss_pred hcccCCCCchHHHhh-h---------------------------------------------------------------
Q 039483 127 RMTNKEKHTTLHEAY-N--------------------------------------------------------------- 142 (360)
Q Consensus 127 ~~~d~~g~t~Lh~a~-~--------------------------------------------------------------- 142 (360)
+.+|..|.||||++. +
T Consensus 229 N~kd~~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~ 308 (672)
T PHA02730 229 HGRDEGGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQPYIRGVLADYLNKRFRVTPYNVDMEIVNLLIEGRHTL 308 (672)
T ss_pred CCCCCCCCCHHHHHHHcCcccHHHHHHHHhccccccccccccchhhhhhHHHhhhhhhhcccCCcchHHHHHHhhccCcc
Confidence 889999999999632 1
Q ss_pred --------------cC---------------------HHHHHHhcC---CcHHHHHHHHhhCCCCCccccCCCCCCcHHH
Q 039483 143 --------------KI---------------------PLCMAAEYE---HSSHTVVAILKSCTSVSHIYMKAPMERQALH 184 (360)
Q Consensus 143 --------------~t---------------------~L~~A~~~g---~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh 184 (360)
.+ .||.=..++ + .+++++|+++|++++. . ..|.||||
T Consensus 309 ~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~~~v~-ieIvelLIs~GAdIN~---k-~~G~TpLH 383 (672)
T PHA02730 309 IDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHYGDMVS-IPILRCMLDNGATMDK---T-TDNNYPLH 383 (672)
T ss_pred hhhhhccccccccccchhHHHHHHHhhhccchhHHHHHHHHHHhcCCcCc-HHHHHHHHHCCCCCCc---C-CCCCcHHH
Confidence 01 344444444 5 8999999999999998 6 68999999
Q ss_pred HHHhcCC----cccccccCChHHHHHHHHhcCc-cccccccCCCChHHHH---HHHcC---------CHHHHHHHHhcCC
Q 039483 185 AATMHID----LCKFNHTLSNDCAVQQLFEGKK-SMIKGIDQCWWTPIHY---AAYHR---------NYLILKLILKIDR 247 (360)
Q Consensus 185 ~A~~~~~----~~~~~~~~~~~~~~~~Ll~~~~-~~i~~~d~~g~t~Lh~---A~~~~---------~~~~v~~Ll~~g~ 247 (360)
+|+..++ . +++++|++++. .+++.+|..|.||||. |...+ ..+++++|+++|+
T Consensus 384 ~Aa~~nnn~i~~----------eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GA 453 (672)
T PHA02730 384 DYFVNNNNIVDV----------NVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKYMD 453 (672)
T ss_pred HHHHHcCCcchH----------HHHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccccchhHHHHHHHHHhccc
Confidence 9988774 8 99999999983 3688999999999994 33232 2357999999999
Q ss_pred ccccccccCCCCchhhhhhcCCccc-ccccc--cccCccCCC-CCCcHHHHHHHc--CCHHHHHHHhhhh
Q 039483 248 TAAKIADKDRKMTALHLVHGPKGCQ-NNMLA--SSLMDEGDA-KGNTTVHFFAAV--HRKEIFDDLSGRV 311 (360)
Q Consensus 248 ~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~--~~~~~~~d~-~g~Tpl~~A~~~--~~~~i~~~l~~~~ 311 (360)
++ +.+|. .|+||||+|+..++.+ +++|+ +++++.+|. .|.||+|+|+.. ++.++++.|+...
T Consensus 454 DI-NakD~-~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~~~g~TaL~~Aa~~~~~~~eIv~~LLs~g 521 (672)
T PHA02730 454 DI-DMIDN-ENKTLLYYAVDVNNIQFARRLLEYGASVNTTSRSIINTAIQKSSYRRENKTKLVDLLLSYH 521 (672)
T ss_pred ch-hccCC-CCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCCcCCcCHHHHHHHhhcCcHHHHHHHHHcC
Confidence 99 99999 9999999999998888 88888 499999997 599999999974 7899999998874
|
|
| >KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-28 Score=250.63 Aligned_cols=249 Identities=20% Similarity=0.181 Sum_probs=192.6
Q ss_pred CCCHHHHHHHHcCChHHHHHHHHHHHhhh-hcccCCc----------ccccc-ccccccccccCCCCCCCCChHHHHHHh
Q 039483 24 QIDPNLFKVAAAGNLEPFKDMAREVIESL-LTARSRT----------QSCIS-TSNCRRQKMCQPVTAKGDTRSRHVAAK 91 (360)
Q Consensus 24 ~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~-~~~~~~t----------~~~v~-l~~~~~~~~~~~~~~~g~tp~Lh~A~~ 91 (360)
-..++||.++..|+.+....+...+.... .+..+.+ .+.++ +... +.+. +..+..|.|| ||.|+.
T Consensus 340 ~g~t~lHlaa~~~~~~~~~~l~~~~~~~~~a~~k~~~pl~la~~~g~~~~v~Lll~~-ga~~-~~~gk~gvTp-lh~aa~ 416 (1143)
T KOG4177|consen 340 AGYTPLHLAAKEGQVEVAGALLEHGAQRRQAEEKGFTPLHLAVKSGRVSVVELLLEA-GADP-NSAGKNGVTP-LHVAAH 416 (1143)
T ss_pred CCcccccHhhhhhhHHHHHHhhccccccCcccccCCcchhhhcccCchhHHHhhhhc-cCCc-ccCCCCCcce-eeehhh
Confidence 35577888888888885555544211110 0111111 23333 3333 4555 5566666666 666666
Q ss_pred cCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhh--h-----------------------cCHH
Q 039483 92 FDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAY--N-----------------------KIPL 146 (360)
Q Consensus 92 ~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~--~-----------------------~t~L 146 (360)
.++..+|+.++++|++.+. ++..|.||+|+|+ + .|||
T Consensus 417 ~~~~~~v~l~l~~gA~~~~------------------~~~lG~T~lhvaa~~g~~~~~~~~l~~~g~~~n~~s~~G~T~L 478 (1143)
T KOG4177|consen 417 YGNPRVVKLLLKRGASPNA------------------KAKLGYTPLHVAAKKGRYLQIARLLLQYGADPNAVSKQGFTPL 478 (1143)
T ss_pred ccCcceEEEEeccCCChhh------------------HhhcCCChhhhhhhcccHhhhhhhHhhcCCCcchhccccCcch
Confidence 6666666666666666555 7788888888887 2 8899
Q ss_pred HHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChH
Q 039483 147 CMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTP 226 (360)
Q Consensus 147 ~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~ 226 (360)
|+|+..|+ .+.++.+++.++..+. ..+.+.+++|.+...+.. .+++.+++++ ..++.++..|.||
T Consensus 479 hlaaq~Gh-~~~~~llle~~~~~~~---~~~~~l~~lhla~~~~~v----------~~~~~l~~~g-a~v~~~~~r~~Tp 543 (1143)
T KOG4177|consen 479 HLAAQEGH-TEVVQLLLEGGANDNL---DAKKGLTPLHLAADEDTV----------KVAKILLEHG-ANVDLRTGRGYTP 543 (1143)
T ss_pred hhhhccCC-chHHHHhhhcCCccCc---cchhccchhhhhhhhhhH----------HHHHHHhhcC-Cceehhcccccch
Confidence 99999999 8999988888866666 677888999999998888 9999999888 8889999999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-ccccc--cccCccCCCCCCcHHHHHHHcCCHHH
Q 039483 227 IHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLA--SSLMDEGDAKGNTTVHFFAAVHRKEI 303 (360)
Q Consensus 227 Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~--~~~~~~~d~~g~Tpl~~A~~~~~~~i 303 (360)
||.||.+|+..+|++||++|+++ +.+++ .|+||||.|+..++.+ +++|+ ++++|..|..|.|||++|++.|+.++
T Consensus 544 Lh~A~~~g~v~~VkfLLe~gAdv-~ak~~-~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~TpL~iA~~lg~~~~ 621 (1143)
T KOG4177|consen 544 LHVAVHYGNVDLVKFLLEHGADV-NAKDK-LGYTPLHQAAQQGHNDIAELLLKHGASVNAADLDGFTPLHIAVRLGYLSV 621 (1143)
T ss_pred HHHHHhcCCchHHHHhhhCCccc-cccCC-CCCChhhHHHHcChHHHHHHHHHcCCCCCcccccCcchhHHHHHhcccch
Confidence 99999999999999999999999 99998 9999999999999888 88888 49999999999999999999999999
Q ss_pred HHHHhhh
Q 039483 304 FDDLSGR 310 (360)
Q Consensus 304 ~~~l~~~ 310 (360)
++.+...
T Consensus 622 ~k~l~~~ 628 (1143)
T KOG4177|consen 622 VKLLKVV 628 (1143)
T ss_pred hhHHHhc
Confidence 9977664
|
|
| >KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=226.33 Aligned_cols=184 Identities=17% Similarity=0.117 Sum_probs=169.0
Q ss_pred CChHHHHHHhcCCHHHHHHHHHh-ccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHH
Q 039483 82 DTRSRHVAAKFDHCDIVSVLIER-AKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVV 160 (360)
Q Consensus 82 ~tp~Lh~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~ 160 (360)
.+- ++.|+.+|.++-|+.|++. |.+++. .|.+|. |+||+|+.+++ .++++
T Consensus 45 ~~~-~v~A~q~G~l~~v~~lve~~g~~v~~------------------~D~~g~---------tlLHWAAiNNr-l~v~r 95 (600)
T KOG0509|consen 45 LDD-IVKATQYGELETVKELVESEGESVNN------------------PDREGV---------TLLHWAAINNR-LDVAR 95 (600)
T ss_pred hhh-hhhHhhcchHHHHHHHHhhcCcCCCC------------------CCcCCc---------cceeHHHHcCc-HHHHH
Confidence 345 8999999999999999998 988887 788875 88888889999 99999
Q ss_pred HHHhhCCCCCccccCC-CCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHH
Q 039483 161 AILKSCTSVSHIYMKA-PMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLIL 239 (360)
Q Consensus 161 ~Ll~~g~~~~~~~~~d-~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v 239 (360)
+|+++|+++|. .+ ..+.||||||+++|+. .++++|+++| ++++.+|.+|.+|||+|++.|+..++
T Consensus 96 ~li~~gadvn~---~gG~l~stPLHWAar~G~~----------~vv~lLlqhG-Adpt~~D~~G~~~lHla~~~~~~~~v 161 (600)
T KOG0509|consen 96 YLISHGADVNA---IGGVLGSTPLHWAARNGHI----------SVVDLLLQHG-ADPTLKDKQGLTPLHLAAQFGHTALV 161 (600)
T ss_pred HHHHcCCCccc---cCCCCCCCcchHHHHcCcH----------HHHHHHHHcC-CCCceecCCCCcHHHHHHHhCchHHH
Confidence 99999999999 76 7899999999999999 9999999999 99999999999999999999999999
Q ss_pred HHHHhcCCccccccccCCCCchhhhhhcCCccc-ccccc--cccCccCC-CCCCcHHHHHHHcCCHHHHHHHhhh
Q 039483 240 KLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLA--SSLMDEGD-AKGNTTVHFFAAVHRKEIFDDLSGR 310 (360)
Q Consensus 240 ~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~--~~~~~~~d-~~g~Tpl~~A~~~~~~~i~~~l~~~ 310 (360)
-+||..|+++ +.+|. +|+||||+|+..+... ++.|+ ++.+..+| ++|+||||.|+..|+..+++.+++-
T Consensus 162 ayll~~~~d~-d~~D~-~grTpLmwAaykg~~~~v~~LL~f~a~~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g 234 (600)
T KOG0509|consen 162 AYLLSKGADI-DLRDN-NGRTPLMWAAYKGFALFVRRLLKFGASLLLTDDNHGNTPLHWAVVGGNLTAVKLLLEG 234 (600)
T ss_pred HHHHHhcccC-CCcCC-CCCCHHHHHHHhcccHHHHHHHHhcccccccccccCCchHHHHHhcCCcceEehhhhc
Confidence 9999999999 99999 9999999999988887 77776 58888888 8899999999999999999955554
|
|
| >PHA02730 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-26 Score=227.18 Aligned_cols=257 Identities=11% Similarity=0.027 Sum_probs=195.2
Q ss_pred CCCCHHHHHHHHcC---ChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcC--CHHH
Q 039483 23 PQIDPNLFKVAAAG---NLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFD--HCDI 97 (360)
Q Consensus 23 ~~~~~~L~~Aa~~G---~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g--~~~~ 97 (360)
..+.||||+|+..| +.++++.|++. |+++ +.+|..|.|| ||+|+..| +.++
T Consensus 39 ~~G~TaLh~A~~~~~~~~~eivklLLs~----------------------GAdi-n~kD~~G~TP-Lh~Aa~~~~~~~eI 94 (672)
T PHA02730 39 RRGNNALHCYVSNKCDTDIKIVRLLLSR----------------------GVER-LCRNNEGLTP-LGVYSKRKYVKSQI 94 (672)
T ss_pred CCCCcHHHHHHHcCCcCcHHHHHHHHhC----------------------CCCC-cccCCCCCCh-HHHHHHcCCCcHHH
Confidence 44679999999997 59999999984 8888 9999999999 99999977 7999
Q ss_pred HHHHHHhcccc--Cccccccccc-----------chhhHHHhh--c------cc----CCCCchHHHhh-h---------
Q 039483 98 VSVLIERAKLV--QHEDEELESG-----------VGASRQMIR--M------TN----KEKHTTLHEAY-N--------- 142 (360)
Q Consensus 98 v~~Ll~~g~~~--~~~~~~~~~~-----------~~~~~~~l~--~------~d----~~g~t~Lh~a~-~--------- 142 (360)
|++|++.|+++ +..|.....+ .+.++.++. . .+ ..|.+|++++. +
T Consensus 95 v~~Ll~~~~~~~~~~~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklL 174 (672)
T PHA02730 95 VHLLISSYSNASNELTSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWL 174 (672)
T ss_pred HHHHHhcCCCCCcccccccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHH
Confidence 99999997654 4433222222 234455662 1 11 36888999988 3
Q ss_pred ---------------------cCH-HHHH------HhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhc--CCc
Q 039483 143 ---------------------KIP-LCMA------AEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMH--IDL 192 (360)
Q Consensus 143 ---------------------~t~-L~~A------~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~--~~~ 192 (360)
.+| ||+. ...+. .+++++|+++|++++. +|..|.||||++... ++.
T Consensus 175 i~~g~~v~g~~~~~~~~~~~~c~~~l~~~il~~~~~~~n~-~eiv~lLIs~GadIN~---kd~~G~TpLh~~~~~~~~~~ 250 (672)
T PHA02730 175 LKSECYSTGYVFRSCMYDSDRCKNSLHYYILSHRESESLS-KDVIKCLIDNNVSIHG---RDEGGSLPIQYYWSCSTIDI 250 (672)
T ss_pred HHcCCcccccccccccccCCccchhHHHHHHhhhhhhccC-HHHHHHHHHCCCCCCC---CCCCCCCHHHHHHHcCcccH
Confidence 133 3322 35567 9999999999999999 999999999952222 000
Q ss_pred ---------------------------------------------cc-----------------------c--c------
Q 039483 193 ---------------------------------------------CK-----------------------F--N------ 196 (360)
Q Consensus 193 ---------------------------------------------~~-----------------------~--~------ 196 (360)
+. . +
T Consensus 251 eiv~~Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 330 (672)
T PHA02730 251 EIVKLLIKDVDTCSVYDDISQPYIRGVLADYLNKRFRVTPYNVDMEIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDN 330 (672)
T ss_pred HHHHHHHhccccccccccccchhhhhhHHHhhhhhhhcccCCcchHHHHHHhhccCcchhhhhccccccccccchhHHHH
Confidence 00 0 1
Q ss_pred ----------------------cc-CChHHHHHHHHhcCccccccccCCCChHHHHHHHcCC----HHHHHHHHhcCC--
Q 039483 197 ----------------------HT-LSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRN----YLILKLILKIDR-- 247 (360)
Q Consensus 197 ----------------------~~-~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~----~~~v~~Ll~~g~-- 247 (360)
+. .+..+++++|+++| ++++.. ..|+||||+|+..++ .+++++|+++|+
T Consensus 331 i~~~~~~~~~~~~q~~l~~Y~~~~~~v~ieIvelLIs~G-AdIN~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~ 408 (672)
T PHA02730 331 ILKRFRQQDESIVQAMLINYLHYGDMVSIPILRCMLDNG-ATMDKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHM 408 (672)
T ss_pred HHHhhhccchhHHHHHHHHHHhcCCcCcHHHHHHHHHCC-CCCCcC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCc
Confidence 01 25568888899888 888875 789999999998875 899999999997
Q ss_pred ccccccccCCCCchhhh---hhcCCc----c-----c-cccccc--ccCccCCCCCCcHHHHHHHcCCHHHHHHHhhhh
Q 039483 248 TAAKIADKDRKMTALHL---VHGPKG----C-----Q-NNMLAS--SLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGRV 311 (360)
Q Consensus 248 ~~~~~~d~~~g~tpLh~---A~~~~~----~-----~-~~~L~~--~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~~ 311 (360)
++ +.+|. .|.||||. |...+. . + +++|+. ++++.+|..|+||||+|+..++.++++.|++..
T Consensus 409 dI-N~kd~-~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GADINakD~~G~TPLh~Aa~~~~~eive~LI~~G 485 (672)
T PHA02730 409 AI-NHVSN-NGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKYMDDIDMIDNENKTLLYYAVDVNNIQFARRLLEYG 485 (672)
T ss_pred cc-ccccc-CCCchHhHHHHHHhccccccccchhHHHHHHHHHhcccchhccCCCCCCHHHHHHHhCCHHHHHHHHHCC
Confidence 57 88999 99999984 332321 1 2 577874 899999999999999999999999999998874
|
|
| >PHA02859 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-26 Score=201.44 Aligned_cols=175 Identities=13% Similarity=0.056 Sum_probs=149.8
Q ss_pred CCCCCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhc--CC
Q 039483 77 VTAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEY--EH 154 (360)
Q Consensus 77 ~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~--g~ 154 (360)
....+.|| ||.|+..|+.++|+.|++.+ +. .|..|. ||||+|+.. ++
T Consensus 17 ~~~~~~~p-L~~A~~~~~~~~vk~Li~~~---n~------------------~~~~g~---------TpLh~a~~~~~~~ 65 (209)
T PHA02859 17 LFYRYCNP-LFYYVEKDDIEGVKKWIKFV---ND------------------CNDLYE---------TPIFSCLEKDKVN 65 (209)
T ss_pred HhhccCcH-HHHHHHhCcHHHHHHHHHhh---hc------------------cCccCC---------CHHHHHHHcCCCC
Confidence 35677899 99999999999999999753 33 677776 666666654 47
Q ss_pred cHHHHHHHHhhCCCCCccccCC-CCCCcHHHHHHhc---CCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHH
Q 039483 155 SSHTVVAILKSCTSVSHIYMKA-PMERQALHAATMH---IDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYA 230 (360)
Q Consensus 155 ~~~~~~~Ll~~g~~~~~~~~~d-~~g~t~Lh~A~~~---~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A 230 (360)
.+++++|+++|++++. ++ ..|.||||+|+.. ++. +++++|++++ ++++.+|..|.||||+|
T Consensus 66 -~eiv~~Ll~~gadvn~---~~~~~g~TpLh~a~~~~~~~~~----------eiv~~Ll~~g-adin~~d~~G~TpLh~a 130 (209)
T PHA02859 66 -VEILKFLIENGADVNF---KTRDNNLSALHHYLSFNKNVEP----------EILKILIDSG-SSITEEDEDGKNLLHMY 130 (209)
T ss_pred -HHHHHHHHHCCCCCCc---cCCCCCCCHHHHHHHhCccccH----------HHHHHHHHCC-CCCCCcCCCCCCHHHHH
Confidence 9999999999999998 86 4899999998764 467 9999999998 88999999999999999
Q ss_pred HH--cCCHHHHHHHHhcCCccccccccCCCCchhhhh-hcCCccc-ccccc--cccCccCCCCCCcHHHHHHHcC
Q 039483 231 AY--HRNYLILKLILKIDRTAAKIADKDRKMTALHLV-HGPKGCQ-NNMLA--SSLMDEGDAKGNTTVHFFAAVH 299 (360)
Q Consensus 231 ~~--~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A-~~~~~~~-~~~L~--~~~~~~~d~~g~Tpl~~A~~~~ 299 (360)
+. .++.+++++|++.|+++ +.+|. .|.||||.+ +..++.+ +++|+ +++++.+|..|.||+|+|..++
T Consensus 131 ~~~~~~~~~iv~~Li~~gadi-n~~d~-~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~~d~~g~tpl~la~~~~ 203 (209)
T PHA02859 131 MCNFNVRINVIKLLIDSGVSF-LNKDF-DNNNILYSYILFHSDKKIFDFLTSLGIDINETNKSGYNCYDLIKFRN 203 (209)
T ss_pred HHhccCCHHHHHHHHHcCCCc-ccccC-CCCcHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhhh
Confidence 86 46899999999999999 99999 999999964 5556666 88888 4999999999999999998654
|
|
| >KOG0508 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.1e-27 Score=212.73 Aligned_cols=223 Identities=21% Similarity=0.180 Sum_probs=187.3
Q ss_pred HHHHHHHcCChHHHHHHHHH----HHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHH
Q 039483 28 NLFKVAAAGNLEPFKDMARE----VIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIE 103 (360)
Q Consensus 28 ~L~~Aa~~G~~~~~~~ll~~----~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~ 103 (360)
..+.|++.|++..+..|+.. ++.. + .....+|.|| |-+||++||.++|++|++
T Consensus 7 ~~~naa~~g~l~~l~~ll~~~s~~ei~~---------------------l-~~~~~~g~tP-L~iaaRnGH~~vVeyLle 63 (615)
T KOG0508|consen 7 VVINAARDGKLQLLAKLLINSSNEEIIS---------------------L-IGEVQNGGTP-LLIAARNGHADVVEYLLE 63 (615)
T ss_pred HHHHHhhhhhHHHHHHHHhCCchHHHHH---------------------H-hccccCCCCc-eeeehhcCcHHHHHHHHH
Confidence 45589999999999888762 1222 1 3445678899 999999999999999998
Q ss_pred -hccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcH
Q 039483 104 -RAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQA 182 (360)
Q Consensus 104 -~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~ 182 (360)
.++++... |.-. +.-...+| -+||+.|+..|| .++|+.|+++|+++|. ....+.||
T Consensus 64 ~~~a~~e~~---GsV~-------FDge~Ieg---------appLWaAsaAGH-l~vVk~L~~~ga~VN~---tT~TNStP 120 (615)
T KOG0508|consen 64 HCRASPEQG---GSVR-------FDGETIEG---------APPLWAASAAGH-LEVVKLLLRRGASVND---TTRTNSTP 120 (615)
T ss_pred HhcCCccCC---ceEE-------eCCcccCC---------CchhhHHhccCc-HHHHHHHHHhcCcccc---ccccCCcc
Confidence 45655431 0000 00022334 378888889999 9999999999999999 88888899
Q ss_pred HHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchh
Q 039483 183 LHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTAL 262 (360)
Q Consensus 183 Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpL 262 (360)
|..||.-|+. +++++|++++ ++++..|+.|.|.||+||.+|+.+|+++|++.|+|+ +.++. .|+|+|
T Consensus 121 LraACfDG~l----------eivKyLvE~g-ad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADv-n~ks~-kGNTAL 187 (615)
T KOG0508|consen 121 LRAACFDGHL----------EIVKYLVEHG-ADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADV-NAKSY-KGNTAL 187 (615)
T ss_pred HHHHHhcchh----------HHHHHHHHcC-CCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCc-chhcc-cCchHH
Confidence 9999999999 9999999999 999999999999999999999999999999999999 99999 999999
Q ss_pred hhhhcCCccc-cccccc-ccCccCCCCCCcHHHHHHHcCCHHHHHHHhh
Q 039483 263 HLVHGPKGCQ-NNMLAS-SLMDEGDAKGNTTVHFFAAVHRKEIFDDLSG 309 (360)
Q Consensus 263 h~A~~~~~~~-~~~L~~-~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~ 309 (360)
|.++..|+.+ ++.|++ ...-.+|..|.|||..|+..|+.+++..|..
T Consensus 188 H~caEsG~vdivq~Ll~~ga~i~~d~~GmtPL~~Aa~tG~~~iVe~L~~ 236 (615)
T KOG0508|consen 188 HDCAESGSVDIVQLLLKHGAKIDVDGHGMTPLLLAAVTGHTDIVERLLQ 236 (615)
T ss_pred HhhhhcccHHHHHHHHhCCceeeecCCCCchHHHHhhhcchHHHHHHhc
Confidence 9999999999 899986 3334567789999999999999999998874
|
|
| >PHA02917 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.9e-26 Score=227.92 Aligned_cols=220 Identities=12% Similarity=-0.002 Sum_probs=176.4
Q ss_pred CCCCCHHHHHHHHc---CChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHH--
Q 039483 22 QPQIDPNLFKVAAA---GNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCD-- 96 (360)
Q Consensus 22 ~~~~~~~L~~Aa~~---G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~-- 96 (360)
...+.+|||.|++. |+.+.++.|++. +.++ +..+..|.|| ||.|+..|+.+
T Consensus 29 d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~----------------------ga~v-~~~~~~g~Tp-L~~Aa~~g~~~v~ 84 (661)
T PHA02917 29 NQFKNNALHAYLFNEHCNNVEVVKLLLDS----------------------GTNP-LHKNWRQLTP-LEEYTNSRHVKVN 84 (661)
T ss_pred CCCCCcHHHHHHHhhhcCcHHHHHHHHHC----------------------CCCc-cccCCCCCCH-HHHHHHcCChhHH
Confidence 45667889987555 789999998873 6677 7788889999 99999988844
Q ss_pred --HHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCcccc
Q 039483 97 --IVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYM 174 (360)
Q Consensus 97 --~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~ 174 (360)
+++.|++.+..++. .+. .+++++|+..|+ .+++++|+++|++++.
T Consensus 85 ~~~~~~Ll~~~~~~n~------------------~~~-----------~~~~~~a~~~~~-~e~vk~Ll~~Gadin~--- 131 (661)
T PHA02917 85 KDIAMALLEATGYSNI------------------NDF-----------NIFSYMKSKNVD-VDLIKVLVEHGFDLSV--- 131 (661)
T ss_pred HHHHHHHHhccCCCCC------------------CCc-----------chHHHHHhhcCC-HHHHHHHHHcCCCCCc---
Confidence 55777776543333 221 156678889999 9999999999999999
Q ss_pred CCCCCCcHHHHHH--hcCCcccccccCChHHHHHHHHhcCccccccccC---CC-----------ChHHHHHHH------
Q 039483 175 KAPMERQALHAAT--MHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQ---CW-----------WTPIHYAAY------ 232 (360)
Q Consensus 175 ~d~~g~t~Lh~A~--~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~---~g-----------~t~Lh~A~~------ 232 (360)
+|..|+||||.++ ..|+. +++++|+++| ++++..|. .| .||||+|+.
T Consensus 132 ~d~~g~T~L~~~~a~~~~~~----------eivklLi~~G-a~vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~ 200 (661)
T PHA02917 132 KCENHRSVIENYVMTDDPVP----------EIIDLFIENG-CSVLYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSE 200 (661)
T ss_pred cCCCCccHHHHHHHccCCCH----------HHHHHHHHcC-CCccccccccccccccccccccccccHHHHHHhhccccc
Confidence 9999999999544 56889 9999999999 88876543 34 599999986
Q ss_pred -----cCCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCcc--c-cccccc-ccCc----cCCCCCCcHHHHHHHc-
Q 039483 233 -----HRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGC--Q-NNMLAS-SLMD----EGDAKGNTTVHFFAAV- 298 (360)
Q Consensus 233 -----~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~--~-~~~L~~-~~~~----~~d~~g~Tpl~~A~~~- 298 (360)
+++.+++++|++.|+++ +.+|. +|+||||+|+..++. + +++|+. ++.+ ..|..|.||+++|+.-
T Consensus 201 ~~~~~~~~~eiv~~Li~~Gadv-n~~d~-~G~TpLh~A~~~g~~~~eivk~Li~g~d~~~~~~~~~~~~~~~~~~a~yl~ 278 (661)
T PHA02917 201 SDTRAYVRPEVVKCLINHGIKP-SSIDK-NYCTALQYYIKSSHIDIDIVKLLMKGIDNTAYSYIDDLTCCTRGIMADYLN 278 (661)
T ss_pred ccccccCcHHHHHHHHHCCCCc-ccCCC-CCCcHHHHHHHcCCCcHHHHHHHHhCCcccccccccCcccccchHHHHHHH
Confidence 56899999999999999 99999 999999999999886 4 787874 4443 4667889999999841
Q ss_pred -----C---CHHHHHHHhhhh
Q 039483 299 -----H---RKEIFDDLSGRV 311 (360)
Q Consensus 299 -----~---~~~i~~~l~~~~ 311 (360)
. +.++++.|+++.
T Consensus 279 ~~~~~~~~v~~~iv~~Li~~G 299 (661)
T PHA02917 279 SDYRYNKDVDLDLVKLFLENG 299 (661)
T ss_pred hhccccccchHHHHHHHHhCC
Confidence 1 678999998875
|
|
| >PHA02798 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.3e-26 Score=222.00 Aligned_cols=215 Identities=13% Similarity=0.096 Sum_probs=156.4
Q ss_pred CCHHHHH--HHHcCChHHHHHHHHHHHhhh-hcccCCc---------------ccccc-ccccccccccCCCCCCCCChH
Q 039483 25 IDPNLFK--VAAAGNLEPFKDMAREVIESL-LTARSRT---------------QSCIS-TSNCRRQKMCQPVTAKGDTRS 85 (360)
Q Consensus 25 ~~~~L~~--Aa~~G~~~~~~~ll~~~~~~~-~~~~~~t---------------~~~v~-l~~~~~~~~~~~~~~~g~tp~ 85 (360)
..++++. +...++.++++.|++.+.+.. .+..|.| .++++ |.+. ++++ +.+|..|.||
T Consensus 36 ~~~~~~~yl~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~-Gadi-N~~d~~G~Tp- 112 (489)
T PHA02798 36 EYSIFQKYLQRDSPSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIEN-GADI-NKKNSDGETP- 112 (489)
T ss_pred cchHHHHHHhCCCCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHC-CCCC-CCCCCCcCcH-
Confidence 4454443 333447788888888433221 2233333 35555 7777 8999 9999999999
Q ss_pred HHHHHhcC---CHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhh--------------------
Q 039483 86 RHVAAKFD---HCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYN-------------------- 142 (360)
Q Consensus 86 Lh~A~~~g---~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~-------------------- 142 (360)
||+|+..| +.+++++|+++|++++. +|..|.||||+|+.
T Consensus 113 Lh~a~~~~~~~~~~iv~~Ll~~Gadvn~------------------~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadi 174 (489)
T PHA02798 113 LYCLLSNGYINNLEILLFMIENGADTTL------------------LDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDI 174 (489)
T ss_pred HHHHHHcCCcChHHHHHHHHHcCCCccc------------------cCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCc
Confidence 99999876 78999999999999988 77777766665541
Q ss_pred --------cCHHHHHHhc----CCcHHHHHHHHhhCCCCCccccCCCCCCcHHH-------HHHhcCCcccccccCChHH
Q 039483 143 --------KIPLCMAAEY----EHSSHTVVAILKSCTSVSHIYMKAPMERQALH-------AATMHIDLCKFNHTLSNDC 203 (360)
Q Consensus 143 --------~t~L~~A~~~----g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh-------~A~~~~~~~~~~~~~~~~~ 203 (360)
.||||.++.. ++ .+++++|+++|++++. .+..|.++++ ++...++. .
T Consensus 175 n~~~~~~~~t~Lh~~~~~~~~~~~-~~ivk~Li~~Ga~i~~---~~~~~~~~~~~~l~~l~~~~~~~~~----------~ 240 (489)
T PHA02798 175 NTHNNKEKYDTLHCYFKYNIDRID-ADILKLFVDNGFIINK---ENKSHKKKFMEYLNSLLYDNKRFKK----------N 240 (489)
T ss_pred ccccCcCCCcHHHHHHHhccccCC-HHHHHHHHHCCCCccc---CCccccchHHHHHHHHHhhcccchH----------H
Confidence 3555555432 35 6666666666666666 6666666654 12233344 6
Q ss_pred HHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-cccccc
Q 039483 204 AVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLAS 278 (360)
Q Consensus 204 ~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~~ 278 (360)
++++|+. + .+++.+|..|+||||+|+.+|+.+++++|++.|+++ +.++. .|+||||+|+..++.+ ++.|+.
T Consensus 241 i~~~l~~-~-~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdi-n~~d~-~G~TpL~~A~~~~~~~iv~~lL~ 312 (489)
T PHA02798 241 ILDFIFS-Y-IDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDI-NIITE-LGNTCLFTAFENESKFIFNSILN 312 (489)
T ss_pred HHHHHHh-c-CCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCcc-cccCC-CCCcHHHHHHHcCcHHHHHHHHc
Confidence 6666654 3 678899999999999999999999999999999999 99999 9999999999988888 777764
|
|
| >KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.2e-26 Score=231.18 Aligned_cols=271 Identities=18% Similarity=0.120 Sum_probs=226.1
Q ss_pred CCCCCCHHHHHHHHcCChHHHHHHHHHHHhhh------hcccCCc-----ccccc-ccccccccccCCCCCCCCChHHHH
Q 039483 21 SQPQIDPNLFKVAAAGNLEPFKDMAREVIESL------LTARSRT-----QSCIS-TSNCRRQKMCQPVTAKGDTRSRHV 88 (360)
Q Consensus 21 ~~~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~------~~~~~~t-----~~~v~-l~~~~~~~~~~~~~~~g~tp~Lh~ 88 (360)
....+.+|||.|+..|+++++..++....... .+|-+.+ .++++ +.+. +.++ ...+..+.|| +|+
T Consensus 238 ~d~~gl~~lh~a~~~g~~~i~~~l~~~ga~~~~~~vr~~tplh~AA~~~~~e~~~~ll~~-ga~~-~~~~~~~kt~-l~~ 314 (1143)
T KOG4177|consen 238 KDESGLTPLHVAAFMGHLDIVKLLLQHGASVNVSTVRGETPLHMAARAGQVEVCKLLLQN-GADV-LAKARDDQTP-LHI 314 (1143)
T ss_pred ccccCccHHHHHHhccchhHHHHHHhcccccCcccccccCcchhhhccchhhhHhhhhcc-Cccc-ccccccccCh-hhh
Confidence 35667889999999999999999999432211 3444444 56666 6666 8888 8888888899 999
Q ss_pred HHhcCCHHHHHHHHHhccccCcccccccccchhh------------------------------------------H---
Q 039483 89 AAKFDHCDIVSVLIERAKLVQHEDEELESGVGAS------------------------------------------R--- 123 (360)
Q Consensus 89 A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~------------------------------------------~--- 123 (360)
|.+.|+.++++.++..++..+..+..+.++.+.. +
T Consensus 315 a~~~g~~~i~~~~l~~~~~~~aar~~g~t~lHlaa~~~~~~~~~~l~~~~~~~~~a~~k~~~pl~la~~~g~~~~v~Lll 394 (1143)
T KOG4177|consen 315 ASRLGHEEIVHLLLQAGATPNAARTAGYTPLHLAAKEGQVEVAGALLEHGAQRRQAEEKGFTPLHLAVKSGRVSVVELLL 394 (1143)
T ss_pred hcccchHHHHHHHhhccCCccccCcCCcccccHhhhhhhHHHHHHhhccccccCcccccCCcchhhhcccCchhHHHhhh
Confidence 9999998999998888888887766666663322 0
Q ss_pred ---HHhhcccCCCCchHHHhhh------------------------cCHHHHHHhcC-CcHHHHHHHHhhCCCCCccccC
Q 039483 124 ---QMIRMTNKEKHTTLHEAYN------------------------KIPLCMAAEYE-HSSHTVVAILKSCTSVSHIYMK 175 (360)
Q Consensus 124 ---~~l~~~d~~g~t~Lh~a~~------------------------~t~L~~A~~~g-~~~~~~~~Ll~~g~~~~~~~~~ 175 (360)
...+..++.|.||||.|+. +||+|.|+..| . .+....+++.|.+++. .
T Consensus 395 ~~ga~~~~~gk~gvTplh~aa~~~~~~~v~l~l~~gA~~~~~~~lG~T~lhvaa~~g~~-~~~~~~l~~~g~~~n~---~ 470 (1143)
T KOG4177|consen 395 EAGADPNSAGKNGVTPLHVAAHYGNPRVVKLLLKRGASPNAKAKLGYTPLHVAAKKGRY-LQIARLLLQYGADPNA---V 470 (1143)
T ss_pred hccCCcccCCCCCcceeeehhhccCcceEEEEeccCCChhhHhhcCCChhhhhhhcccH-hhhhhhHhhcCCCcch---h
Confidence 1155666677777777661 89999999998 7 8888889999999998 8
Q ss_pred CCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCcccccccc
Q 039483 176 APMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADK 255 (360)
Q Consensus 176 d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~ 255 (360)
.+.|.||||.|+..|+. ++++.|++.. ...+.....+-+++|+|...+...+++.++++|+++ +.++.
T Consensus 471 s~~G~T~Lhlaaq~Gh~----------~~~~llle~~-~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v-~~~~~ 538 (1143)
T KOG4177|consen 471 SKQGFTPLHLAAQEGHT----------EVVQLLLEGG-ANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANV-DLRTG 538 (1143)
T ss_pred ccccCcchhhhhccCCc----------hHHHHhhhcC-CccCccchhccchhhhhhhhhhHHHHHHHhhcCCce-ehhcc
Confidence 88999999999999999 9999999887 666777788999999999999999999999999999 99999
Q ss_pred CCCCchhhhhhcCCccc-cccccc--ccCccCCCCCCcHHHHHHHcCCHHHHHHHhhhh
Q 039483 256 DRKMTALHLVHGPKGCQ-NNMLAS--SLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGRV 311 (360)
Q Consensus 256 ~~g~tpLh~A~~~~~~~-~~~L~~--~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~~ 311 (360)
+|.||||+|+..++.. +++|++ ++++.+++.|+||||.|+..|+.+++..|.++-
T Consensus 539 -r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~G 596 (1143)
T KOG4177|consen 539 -RGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHG 596 (1143)
T ss_pred -cccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcC
Confidence 9999999999999999 999995 999999999999999999999999999999874
|
|
| >PHA02792 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=5e-25 Score=214.01 Aligned_cols=243 Identities=9% Similarity=0.002 Sum_probs=178.7
Q ss_pred HHHHH-HHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHh-cCCHHHHHHHHHh
Q 039483 27 PNLFK-VAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAK-FDHCDIVSVLIER 104 (360)
Q Consensus 27 ~~L~~-Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~-~g~~~~v~~Ll~~ 104 (360)
.++|. |...|++|+++.|++. ++++ +.++..|.|| +|+|+. .+|.|++++|+++
T Consensus 73 ~~~~~~~s~n~~lElvk~LI~~----------------------GAdv-N~~~n~~~~~-l~ya~~~~~~~eivk~Ll~~ 128 (631)
T PHA02792 73 DIFEYLCSDNIDIELLKLLISK----------------------GLEI-NSIKNGINIV-EKYATTSNPNVDVFKLLLDK 128 (631)
T ss_pred cHHHHHHHhcccHHHHHHHHHc----------------------CCCc-ccccCCCCcc-eeEeecCCCChHHHHHHHHC
Confidence 34443 5566677777777663 8888 9999989999 999976 6999999999999
Q ss_pred ccccCcccccccccch--hh----------------HHHhhcccCCCCchHHHhhhcCHHHHHHhcC-------CcHHHH
Q 039483 105 AKLVQHEDEELESGVG--AS----------------RQMIRMTNKEKHTTLHEAYNKIPLCMAAEYE-------HSSHTV 159 (360)
Q Consensus 105 g~~~~~~~~~~~~~~~--~~----------------~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g-------~~~~~~ 159 (360)
|+++...+.+|.++.. ++ ...++.+|..|.||||+|+ ..+ + .+++
T Consensus 129 Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i---------~~~s~~~~~~~-~~v~ 198 (631)
T PHA02792 129 GIPTCSNIQYGYKIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYI---------ITRSQDGYATS-LDVI 198 (631)
T ss_pred CCCcccccccCcchhhhhcccccccchhhhccccccccccccCCCCCCchHHHHH---------hhCCcccccCC-HHHH
Confidence 9998876667766411 11 2346777888875555554 444 6 9999
Q ss_pred HHHHhhCCCCCccccCCCCCCcHHHHHHhcC--Ccccc----------cc------------------------------
Q 039483 160 VAILKSCTSVSHIYMKAPMERQALHAATMHI--DLCKF----------NH------------------------------ 197 (360)
Q Consensus 160 ~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~--~~~~~----------~~------------------------------ 197 (360)
+.|+++|++++. +|..|.||||+|+... +...+ +.
T Consensus 199 k~Li~~g~~~~~---~d~~g~t~l~~~~~~~~i~~ei~~~L~~~~~~~~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~ 275 (631)
T PHA02792 199 NYLISHEKEMRY---YTYREHTTLYYYVDKCDIKREIFDALFDSNYSGNELMNILSNYLRKQYRNKNHKIDNYIVDKLLS 275 (631)
T ss_pred HHHHhCCCCcCc---cCCCCChHHHHHHHcccchHHHHHHHHhccccccchHhHHHHHHHHHhccCccCccHHHHHHHHh
Confidence 999999999999 9999999999999887 22000 00
Q ss_pred -----------------------------------------cCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCH
Q 039483 198 -----------------------------------------TLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNY 236 (360)
Q Consensus 198 -----------------------------------------~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~ 236 (360)
..+..+++++|++.| .++. ......++|.|+..|+.
T Consensus 276 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Yl~~~~v~ieiIK~LId~G-a~~~--r~~~~n~~~~Aa~~gn~ 352 (631)
T PHA02792 276 GHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEYVSYHTVYINVIKCMIDEG-ATLY--RFKHINKYFQKFDNRDP 352 (631)
T ss_pred CCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHCC-Cccc--cCCcchHHHHHHHcCCH
Confidence 111223344444443 2121 22355678899999999
Q ss_pred HHHHHHHhcCCccccccccCCC--CchhhhhhcCCccc----ccccc--cccCccCCCCCCcHHHHHHHcCCHHHHHHHh
Q 039483 237 LILKLILKIDRTAAKIADKDRK--MTALHLVHGPKGCQ----NNMLA--SSLMDEGDAKGNTTVHFFAAVHRKEIFDDLS 308 (360)
Q Consensus 237 ~~v~~Ll~~g~~~~~~~d~~~g--~tpLh~A~~~~~~~----~~~L~--~~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~ 308 (360)
+++++|+++|+++ +.+|. .| .||||.|......+ ++.|+ +++++.+|..|+||||+|+..++.++++.|.
T Consensus 353 eIVelLIs~GADI-N~kD~-~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN~kD~~G~TPLh~Aa~~~n~eivelLL 430 (631)
T PHA02792 353 KVVEYILKNGNVV-VEDDD-NIINIMPLFPTLSIHESDVLSILKLCKPYIDDINKIDKHGRSILYYCIESHSVSLVEWLI 430 (631)
T ss_pred HHHHHHHHcCCch-hhhcC-CCCChhHHHHHHHhccHhHHHHHHHHHhcCCccccccccCcchHHHHHHcCCHHHHHHHH
Confidence 9999999999999 88887 64 68999876655443 45555 4899999999999999999999999999998
Q ss_pred hhh
Q 039483 309 GRV 311 (360)
Q Consensus 309 ~~~ 311 (360)
...
T Consensus 431 s~G 433 (631)
T PHA02792 431 DNG 433 (631)
T ss_pred HCC
Confidence 874
|
|
| >PHA02917 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.2e-25 Score=220.52 Aligned_cols=193 Identities=14% Similarity=0.060 Sum_probs=158.2
Q ss_pred cccccCCCCCCCCChHHHHHHhc---CCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHH
Q 039483 70 RQKMCQPVTAKGDTRSRHVAAKF---DHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPL 146 (360)
Q Consensus 70 ~~~~~~~~~~~g~tp~Lh~A~~~---g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L 146 (360)
+..+ +..|..|.|| ||+||.. |+.++|++|++.|++++. +|..|. |||
T Consensus 22 ~~~~-~~~d~~g~t~-Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~------------------~~~~g~---------TpL 72 (661)
T PHA02917 22 RDPN-DTRNQFKNNA-LHAYLFNEHCNNVEVVKLLLDSGTNPLH------------------KNWRQL---------TPL 72 (661)
T ss_pred cCcc-cccCCCCCcH-HHHHHHhhhcCcHHHHHHHHHCCCCccc------------------cCCCCC---------CHH
Confidence 6666 7789999999 9998665 889999999999999987 788886 666
Q ss_pred HHHHhcCCcHH----HHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCC
Q 039483 147 CMAAEYEHSSH----TVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQC 222 (360)
Q Consensus 147 ~~A~~~g~~~~----~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~ 222 (360)
|.|+..|+ .+ +++.|++.+...+. .+ ..+++|+|+..++. +++++|++.| ++++.+|..
T Consensus 73 ~~Aa~~g~-~~v~~~~~~~Ll~~~~~~n~---~~--~~~~~~~a~~~~~~----------e~vk~Ll~~G-adin~~d~~ 135 (661)
T PHA02917 73 EEYTNSRH-VKVNKDIAMALLEATGYSNI---ND--FNIFSYMKSKNVDV----------DLIKVLVEHG-FDLSVKCEN 135 (661)
T ss_pred HHHHHcCC-hhHHHHHHHHHHhccCCCCC---CC--cchHHHHHhhcCCH----------HHHHHHHHcC-CCCCccCCC
Confidence 77777776 54 56778876544444 33 23677889999999 9999999999 999999999
Q ss_pred CChHHHHHH--HcCCHHHHHHHHhcCCcccccccc--CCC-----------Cchhhhhhc-----------CCccc-ccc
Q 039483 223 WWTPIHYAA--YHRNYLILKLILKIDRTAAKIADK--DRK-----------MTALHLVHG-----------PKGCQ-NNM 275 (360)
Q Consensus 223 g~t~Lh~A~--~~~~~~~v~~Ll~~g~~~~~~~d~--~~g-----------~tpLh~A~~-----------~~~~~-~~~ 275 (360)
|+||||.|+ ..|+.+++++|+++|+++ +.+|. ..| .||||+|+. .++.+ +++
T Consensus 136 g~T~L~~~~a~~~~~~eivklLi~~Ga~v-n~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~ 214 (661)
T PHA02917 136 HRSVIENYVMTDDPVPEIIDLFIENGCSV-LYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKC 214 (661)
T ss_pred CccHHHHHHHccCCCHHHHHHHHHcCCCc-cccccccccccccccccccccccHHHHHHhhcccccccccccCcHHHHHH
Confidence 999999654 578999999999999999 76553 023 599999975 23455 888
Q ss_pred cc--cccCccCCCCCCcHHHHHHHcCCH--HHHHHHhh
Q 039483 276 LA--SSLMDEGDAKGNTTVHFFAAVHRK--EIFDDLSG 309 (360)
Q Consensus 276 L~--~~~~~~~d~~g~Tpl~~A~~~~~~--~i~~~l~~ 309 (360)
|+ +++++.+|.+|+||||+|+++|+. ++++.|..
T Consensus 215 Li~~Gadvn~~d~~G~TpLh~A~~~g~~~~eivk~Li~ 252 (661)
T PHA02917 215 LINHGIKPSSIDKNYCTALQYYIKSSHIDIDIVKLLMK 252 (661)
T ss_pred HHHCCCCcccCCCCCCcHHHHHHHcCCCcHHHHHHHHh
Confidence 98 499999999999999999999985 79998865
|
|
| >KOG0508 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.4e-26 Score=205.77 Aligned_cols=195 Identities=18% Similarity=0.145 Sum_probs=166.5
Q ss_pred CCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHH
Q 039483 23 PQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLI 102 (360)
Q Consensus 23 ~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll 102 (360)
..+.+||..||++|+.+++++|++.. ..+ .+.+. ...+ +.-+-.|-+| |-.|+..||+++|+.|+
T Consensus 40 ~~g~tPL~iaaRnGH~~vVeyLle~~-~a~-~e~~G-----------sV~F-Dge~Iegapp-LWaAsaAGHl~vVk~L~ 104 (615)
T KOG0508|consen 40 QNGGTPLLIAARNGHADVVEYLLEHC-RAS-PEQGG-----------SVRF-DGETIEGAPP-LWAASAAGHLEVVKLLL 104 (615)
T ss_pred cCCCCceeeehhcCcHHHHHHHHHHh-cCC-ccCCc-----------eEEe-CCcccCCCch-hhHHhccCcHHHHHHHH
Confidence 34458999999999999999999931 221 11111 2233 4445678889 99999999999999999
Q ss_pred HhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcH
Q 039483 103 ERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQA 182 (360)
Q Consensus 103 ~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~ 182 (360)
++|+++|. .... |.|||-.||.-|+ .+++++|+++|++++. .+..|.|-
T Consensus 105 ~~ga~VN~------------------tT~T---------NStPLraACfDG~-leivKyLvE~gad~~I---anrhGhTc 153 (615)
T KOG0508|consen 105 RRGASVND------------------TTRT---------NSTPLRAACFDGH-LEIVKYLVEHGADPEI---ANRHGHTC 153 (615)
T ss_pred HhcCcccc------------------cccc---------CCccHHHHHhcch-hHHHHHHHHcCCCCcc---cccCCCee
Confidence 99999987 2222 2599999999999 9999999999999999 99999999
Q ss_pred HHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchh
Q 039483 183 LHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTAL 262 (360)
Q Consensus 183 Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpL 262 (360)
||.||..|+. +++++|++.+ +++|.++..|+|+||.++..|+++++++|+++|+.+ .+|. .|.|||
T Consensus 154 LmIa~ykGh~----------~I~qyLle~g-ADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i--~~d~-~GmtPL 219 (615)
T KOG0508|consen 154 LMIACYKGHV----------DIAQYLLEQG-ADVNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKI--DVDG-HGMTPL 219 (615)
T ss_pred EEeeeccCch----------HHHHHHHHhC-CCcchhcccCchHHHhhhhcccHHHHHHHHhCCcee--eecC-CCCchH
Confidence 9999999999 9999999999 999999999999999999999999999999999876 4666 899999
Q ss_pred hhhhcCCccc-ccccc
Q 039483 263 HLVHGPKGCQ-NNMLA 277 (360)
Q Consensus 263 h~A~~~~~~~-~~~L~ 277 (360)
..|+..|..+ ++.|+
T Consensus 220 ~~Aa~tG~~~iVe~L~ 235 (615)
T KOG0508|consen 220 LLAAVTGHTDIVERLL 235 (615)
T ss_pred HHHhhhcchHHHHHHh
Confidence 9999988877 66665
|
|
| >PHA02792 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.5e-24 Score=208.18 Aligned_cols=235 Identities=13% Similarity=0.039 Sum_probs=185.9
Q ss_pred CCCCHHHHHHHH-cCChHHHHHHHHHHHhhh-hcccCCc--ccc---cc-------cc--ccccccccCCCCCCCCChHH
Q 039483 23 PQIDPNLFKVAA-AGNLEPFKDMAREVIESL-LTARSRT--QSC---IS-------TS--NCRRQKMCQPVTAKGDTRSR 86 (360)
Q Consensus 23 ~~~~~~L~~Aa~-~G~~~~~~~ll~~~~~~~-~~~~~~t--~~~---v~-------l~--~~~~~~~~~~~~~~g~tp~L 86 (360)
..+.+++|.|+. .|+.|+++.|++.+.+.. ....|.| .+- .+ .. +. +..+ +..|..|.|| |
T Consensus 103 n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i-~~~~~~g~t~-L 179 (631)
T PHA02792 103 NGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYYNWDDELDDYDY-DYTT-DYDDRMGKTV-L 179 (631)
T ss_pred CCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhcccccccchhhhcccccc-cccc-ccCCCCCCch-H
Confidence 457788999966 699999999999654421 1233333 111 11 11 11 2345 6778889999 9
Q ss_pred HHHHhcC-------CHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhh-h----------------
Q 039483 87 HVAAKFD-------HCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAY-N---------------- 142 (360)
Q Consensus 87 h~A~~~g-------~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~-~---------------- 142 (360)
|+|+..+ +.++++.|+++|++++. .|..|.||||+|+ +
T Consensus 180 ~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~------------------~d~~g~t~l~~~~~~~~i~~ei~~~L~~~~~ 241 (631)
T PHA02792 180 YYYIITRSQDGYATSLDVINYLISHEKEMRY------------------YTYREHTTLYYYVDKCDIKREIFDALFDSNY 241 (631)
T ss_pred HHHHhhCCcccccCCHHHHHHHHhCCCCcCc------------------cCCCCChHHHHHHHcccchHHHHHHHHhccc
Confidence 9999999 89999999999999998 7777888888887 2
Q ss_pred -----------------------------------------------------------------cCHHHHHHhcC--Cc
Q 039483 143 -----------------------------------------------------------------KIPLCMAAEYE--HS 155 (360)
Q Consensus 143 -----------------------------------------------------------------~t~L~~A~~~g--~~ 155 (360)
+--||.=..++ +
T Consensus 242 ~~~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Yl~~~~v~- 320 (631)
T PHA02792 242 SGNELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEYVSYHTVY- 320 (631)
T ss_pred cccchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHHHhcCCcc-
Confidence 33455555555 5
Q ss_pred HHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCC--ChHHHHHHHc
Q 039483 156 SHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCW--WTPIHYAAYH 233 (360)
Q Consensus 156 ~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g--~t~Lh~A~~~ 233 (360)
.+++++|+++|++..- .....+++.|+..|+. +++++|+++| ++++.+|..| .||||+|+..
T Consensus 321 ieiIK~LId~Ga~~~r-----~~~~n~~~~Aa~~gn~----------eIVelLIs~G-ADIN~kD~~g~~~TpLh~A~~n 384 (631)
T PHA02792 321 INVIKCMIDEGATLYR-----FKHINKYFQKFDNRDP----------KVVEYILKNG-NVVVEDDDNIINIMPLFPTLSI 384 (631)
T ss_pred HHHHHHHHHCCCcccc-----CCcchHHHHHHHcCCH----------HHHHHHHHcC-CchhhhcCCCCChhHHHHHHHh
Confidence 8999999999987632 2255678999999999 9999999999 8899888775 6999998877
Q ss_pred CCH---HHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-ccccc--cccCccCCCCCCcHHHHHHH
Q 039483 234 RNY---LILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLA--SSLMDEGDAKGNTTVHFFAA 297 (360)
Q Consensus 234 ~~~---~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~--~~~~~~~d~~g~Tpl~~A~~ 297 (360)
+.. +++++|+++|+++ +.+|. .|.||||+|+..++.+ +++|+ +++++.+|..|+|||++|+.
T Consensus 385 ~~~~v~~IlklLIs~GADI-N~kD~-~G~TPLh~Aa~~~n~eivelLLs~GADIN~kD~~G~TpL~~A~~ 452 (631)
T PHA02792 385 HESDVLSILKLCKPYIDDI-NKIDK-HGRSILYYCIESHSVSLVEWLIDNGADINITTKYGSTCIGICVI 452 (631)
T ss_pred ccHhHHHHHHHHHhcCCcc-ccccc-cCcchHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence 654 4688899999999 99999 9999999999998888 88888 49999999999999999976
|
|
| >PHA02795 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.6e-24 Score=201.98 Aligned_cols=186 Identities=10% Similarity=-0.022 Sum_probs=150.2
Q ss_pred CCCCCCCChHHHHHHh--cCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcC
Q 039483 76 PVTAKGDTRSRHVAAK--FDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYE 153 (360)
Q Consensus 76 ~~~~~g~tp~Lh~A~~--~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g 153 (360)
.++..++|+ ||+|+. .|+.++|++|+++|++++. .+. .||||.|+..+
T Consensus 111 ~~~~~~~~~-L~~~~~n~~n~~eiV~~LI~~GADIn~------------------~~~-----------~t~lh~A~~~~ 160 (437)
T PHA02795 111 KNCNSVQDL-LLYYLSNAYVEIDIVDFMVDHGAVIYK------------------IEC-----------LNAYFRGICKK 160 (437)
T ss_pred hccccccHH-HHHHHHhcCCCHHHHHHHHHCCCCCCC------------------CCC-----------CCHHHHHHHcC
Confidence 677889999 999999 8999999999999999976 332 38899999999
Q ss_pred CcHHHHHHHHhhCCCCCcccc---CCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHH
Q 039483 154 HSSHTVVAILKSCTSVSHIYM---KAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYA 230 (360)
Q Consensus 154 ~~~~~~~~Ll~~g~~~~~~~~---~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A 230 (360)
+ .+++++|+++|+....... .+..+.+++|.|+..++. +++++|++++ ++++.+|..|+||||+|
T Consensus 161 ~-~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~----------eIve~LIs~G-ADIN~kD~~G~TpLh~A 228 (437)
T PHA02795 161 E-SSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVL----------EIYKLCIPYI-EDINQLDAGGRTLLYRA 228 (437)
T ss_pred c-HHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHH----------HHHHHHHhCc-CCcCcCCCCCCCHHHHH
Confidence 9 9999999999975432000 123578999999999999 9999999999 88999999999999999
Q ss_pred HHcCCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCc--------cc-cccccc--ccCccCCCCCCcHHHHHHHcC
Q 039483 231 AYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKG--------CQ-NNMLAS--SLMDEGDAKGNTTVHFFAAVH 299 (360)
Q Consensus 231 ~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~--------~~-~~~L~~--~~~~~~d~~g~Tpl~~A~~~~ 299 (360)
+..|+.+++++|+++|+++ +.++. .|+||||+|+..++ .+ +++|++ ++++..+. |.+.. ...
T Consensus 229 a~~g~~eiVelLL~~GAdI-N~~d~-~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~~~~~---~~~~~--~~~ 301 (437)
T PHA02795 229 IYAGYIDLVSWLLENGANV-NAVMS-NGYTCLDVAVDRGSVIARRETHLKILEILLREPLSIDCIKL---AILNN--TIE 301 (437)
T ss_pred HHcCCHHHHHHHHHCCCCC-CCcCC-CCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCCCchhH---Hhhhc--ccc
Confidence 9999999999999999999 99999 99999999998875 24 777774 55544332 22221 112
Q ss_pred CHHHHHHHhhh
Q 039483 300 RKEIFDDLSGR 310 (360)
Q Consensus 300 ~~~i~~~l~~~ 310 (360)
+.++++.+.++
T Consensus 302 n~~~ik~lI~y 312 (437)
T PHA02795 302 NHDVIKLCIKY 312 (437)
T ss_pred hHHHHHHHHHH
Confidence 55666665554
|
|
| >PLN03192 Voltage-dependent potassium channel; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.7e-23 Score=214.07 Aligned_cols=176 Identities=19% Similarity=0.210 Sum_probs=152.9
Q ss_pred CCCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHH
Q 039483 22 QPQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVL 101 (360)
Q Consensus 22 ~~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~L 101 (360)
.+.+.++||.||..|+.+.++.|++. +.++ +..|..|.|| ||+||..|+.+++++|
T Consensus 522 ~~~~~~~L~~Aa~~g~~~~l~~Ll~~----------------------G~d~-n~~d~~G~Tp-Lh~Aa~~g~~~~v~~L 577 (823)
T PLN03192 522 DPNMASNLLTVASTGNAALLEELLKA----------------------KLDP-DIGDSKGRTP-LHIAASKGYEDCVLVL 577 (823)
T ss_pred CccchhHHHHHHHcCCHHHHHHHHHC----------------------CCCC-CCCCCCCCCH-HHHHHHcChHHHHHHH
Confidence 34567889999999999999999874 6677 8899999999 9999999999999999
Q ss_pred HHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCc
Q 039483 102 IERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQ 181 (360)
Q Consensus 102 l~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t 181 (360)
+++|++++. +|.+|. ||||.|+..|+ .++++.|+..+...+ ...+.+
T Consensus 578 l~~gadin~------------------~d~~G~---------TpL~~A~~~g~-~~iv~~L~~~~~~~~-----~~~~~~ 624 (823)
T PLN03192 578 LKHACNVHI------------------RDANGN---------TALWNAISAKH-HKIFRILYHFASISD-----PHAAGD 624 (823)
T ss_pred HhcCCCCCC------------------cCCCCC---------CHHHHHHHhCC-HHHHHHHHhcCcccC-----cccCch
Confidence 999999888 788885 77788888999 999999998775443 235678
Q ss_pred HHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCC-Cc
Q 039483 182 ALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRK-MT 260 (360)
Q Consensus 182 ~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g-~t 260 (360)
+||.|+..|+. ++++.|++++ .+++.+|..|+||||+|+..|+.+++++|+++|+++ +..+. .| .|
T Consensus 625 ~L~~Aa~~g~~----------~~v~~Ll~~G-adin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv-~~~~~-~g~~t 691 (823)
T PLN03192 625 LLCTAAKRNDL----------TAMKELLKQG-LNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADV-DKANT-DDDFS 691 (823)
T ss_pred HHHHHHHhCCH----------HHHHHHHHCC-CCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCC-CCCCC-CCCCC
Confidence 99999999999 9999999998 889999999999999999999999999999999999 88888 76 89
Q ss_pred hhhhhhc
Q 039483 261 ALHLVHG 267 (360)
Q Consensus 261 pLh~A~~ 267 (360)
|++++..
T Consensus 692 ~~~l~~~ 698 (823)
T PLN03192 692 PTELREL 698 (823)
T ss_pred HHHHHHH
Confidence 9888744
|
|
| >PHA02795 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-23 Score=197.18 Aligned_cols=186 Identities=12% Similarity=-0.001 Sum_probs=156.4
Q ss_pred HHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHh--cCCcHHHHHHHHh
Q 039483 87 HVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAE--YEHSSHTVVAILK 164 (360)
Q Consensus 87 h~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~--~g~~~~~~~~Ll~ 164 (360)
-+|+..+..|++++|+.+|++++.. ...+ .++..++ |+||.++. .|+ .+++++|++
T Consensus 82 ~~~~~~~~k~~~~~l~s~~~~~~~~-----------~~~~-~~~~~~~---------~~L~~~~~n~~n~-~eiV~~LI~ 139 (437)
T PHA02795 82 RLFAYITYKDIISALVSKNYMEDIF-----------SIII-KNCNSVQ---------DLLLYYLSNAYVE-IDIVDFMVD 139 (437)
T ss_pred hHHhhcchHHHHHHHHhcccccchh-----------hhhh-hcccccc---------HHHHHHHHhcCCC-HHHHHHHHH
Confidence 4899999999999999999998721 0011 1555565 55555665 788 999999999
Q ss_pred hCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccc-----cCCCChHHHHHHHcCCHHHH
Q 039483 165 SCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGI-----DQCWWTPIHYAAYHRNYLIL 239 (360)
Q Consensus 165 ~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~-----d~~g~t~Lh~A~~~~~~~~v 239 (360)
+|++++. .+ +.||+|+|+..++. +++++|+++|....+.. +..+.+++|.|+..++.+++
T Consensus 140 ~GADIn~---~~--~~t~lh~A~~~~~~----------eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIv 204 (437)
T PHA02795 140 HGAVIYK---IE--CLNAYFRGICKKES----------SVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIY 204 (437)
T ss_pred CCCCCCC---CC--CCCHHHHHHHcCcH----------HHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHH
Confidence 9999987 54 48999999999999 99999999993232222 23477999999999999999
Q ss_pred HHHHhcCCccccccccCCCCchhhhhhcCCccc-ccccc--cccCccCCCCCCcHHHHHHHcCC--------HHHHHHHh
Q 039483 240 KLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLA--SSLMDEGDAKGNTTVHFFAAVHR--------KEIFDDLS 308 (360)
Q Consensus 240 ~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~--~~~~~~~d~~g~Tpl~~A~~~~~--------~~i~~~l~ 308 (360)
++|+++|+++ +.+|. .|+||||+|+..++.+ +++|+ +++++.+|..|+||||+|+..|+ .++++.|+
T Consensus 205 e~LIs~GADI-N~kD~-~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL 282 (437)
T PHA02795 205 KLCIPYIEDI-NQLDA-GGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILL 282 (437)
T ss_pred HHHHhCcCCc-CcCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHH
Confidence 9999999999 99999 9999999999999999 99988 49999999999999999999984 68999887
Q ss_pred hhh
Q 039483 309 GRV 311 (360)
Q Consensus 309 ~~~ 311 (360)
+..
T Consensus 283 ~~g 285 (437)
T PHA02795 283 REP 285 (437)
T ss_pred hCC
Confidence 753
|
|
| >TIGR00870 trp transient-receptor-potential calcium channel protein | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-23 Score=214.96 Aligned_cols=221 Identities=15% Similarity=0.068 Sum_probs=169.0
Q ss_pred CCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHH-HHHhcCCHHHHHHH
Q 039483 23 PQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRH-VAAKFDHCDIVSVL 101 (360)
Q Consensus 23 ~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh-~A~~~g~~~~v~~L 101 (360)
...+..++.||+.|+.+.++.+++... +.++ +..|..|+|| || .|+..++.++++.|
T Consensus 15 ~~~~~~~l~A~~~g~~~~v~~lL~~~~--------------------~~~i-n~~d~~G~t~-Lh~~A~~~~~~eiv~lL 72 (743)
T TIGR00870 15 SDEEKAFLPAAERGDLASVYRDLEEPK--------------------KLNI-NCPDRLGRSA-LFVAAIENENLELTELL 72 (743)
T ss_pred CHHHHHHHHHHHcCCHHHHHHHhcccc--------------------ccCC-CCcCccchhH-HHHHHHhcChHHHHHHH
Confidence 445688999999999999999988310 3455 7788999999 99 88889999999999
Q ss_pred HHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcC---CcHHHHHHHHhhCCC------CCc-
Q 039483 102 IERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYE---HSSHTVVAILKSCTS------VSH- 171 (360)
Q Consensus 102 l~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g---~~~~~~~~Ll~~g~~------~~~- 171 (360)
++.|+ .+..|. ||||.|+..+ . ..++..+...+.+ ++.
T Consensus 73 l~~g~----------------------~~~~G~---------T~Lh~A~~~~~~~v-~~ll~~l~~~~~~~~~~~~~~~~ 120 (743)
T TIGR00870 73 LNLSC----------------------RGAVGD---------TLLHAISLEYVDAV-EAILLHLLAAFRKSGPLELANDQ 120 (743)
T ss_pred HhCCC----------------------CCCcCh---------HHHHHHHhccHHHH-HHHHHHHhhcccccCchhhhccc
Confidence 99885 345665 5555555422 1 2334444443322 111
Q ss_pred cccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCcccccccc--------------CCCChHHHHHHHcCCHH
Q 039483 172 IYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGID--------------QCWWTPIHYAAYHRNYL 237 (360)
Q Consensus 172 ~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d--------------~~g~t~Lh~A~~~~~~~ 237 (360)
.......|.||||+|+..|+. +++++|++++ ++++.++ ..|.||||+|+..|+.+
T Consensus 121 ~~~~~~~G~TpLhlAa~~~~~----------eiVklLL~~G-Adv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~ 189 (743)
T TIGR00870 121 YTSEFTPGITALHLAAHRQNY----------EIVKLLLERG-ASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPS 189 (743)
T ss_pred cccccCCCCcHHHHHHHhCCH----------HHHHHHHhCC-CCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHH
Confidence 000234699999999999999 9999999998 7777542 36899999999999999
Q ss_pred HHHHHHhcCCccccccccCCCCchhhhhhcCCc-----cc-----cccccc-----ccC----ccCCCCCCcHHHHHHHc
Q 039483 238 ILKLILKIDRTAAKIADKDRKMTALHLVHGPKG-----CQ-----NNMLAS-----SLM----DEGDAKGNTTVHFFAAV 298 (360)
Q Consensus 238 ~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~-----~~-----~~~L~~-----~~~----~~~d~~g~Tpl~~A~~~ 298 (360)
++++|++.|+++ +.+|. .|+||||+|+..+. .+ .+.++. .+. +..|.+|.||||+|+..
T Consensus 190 iv~lLl~~gadi-n~~d~-~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~ 267 (743)
T TIGR00870 190 IVALLSEDPADI-LTADS-LGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKE 267 (743)
T ss_pred HHHHHhcCCcch-hhHhh-hhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhc
Confidence 999999999999 99999 99999999988752 11 222321 222 67799999999999999
Q ss_pred CCHHHHHHHhhh
Q 039483 299 HRKEIFDDLSGR 310 (360)
Q Consensus 299 ~~~~i~~~l~~~ 310 (360)
|+.++++.+++.
T Consensus 268 g~~~l~~lLL~~ 279 (743)
T TIGR00870 268 GRIVLFRLKLAI 279 (743)
T ss_pred CCccHHHHHHHH
Confidence 999999988884
|
after chronic exposure to capsaicin. (McCleskey and Gold, 1999). |
| >PLN03192 Voltage-dependent potassium channel; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.2e-23 Score=211.92 Aligned_cols=178 Identities=15% Similarity=0.132 Sum_probs=159.8
Q ss_pred CCCCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHH
Q 039483 78 TAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSH 157 (360)
Q Consensus 78 ~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~ 157 (360)
+..+.++ ||.||..|+.++++.|++.|++++. .|..|. ||||+|+..|+ .+
T Consensus 522 ~~~~~~~-L~~Aa~~g~~~~l~~Ll~~G~d~n~------------------~d~~G~---------TpLh~Aa~~g~-~~ 572 (823)
T PLN03192 522 DPNMASN-LLTVASTGNAALLEELLKAKLDPDI------------------GDSKGR---------TPLHIAASKGY-ED 572 (823)
T ss_pred CccchhH-HHHHHHcCCHHHHHHHHHCCCCCCC------------------CCCCCC---------CHHHHHHHcCh-HH
Confidence 3456789 9999999999999999999999998 788885 88888899999 99
Q ss_pred HHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHH
Q 039483 158 TVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYL 237 (360)
Q Consensus 158 ~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~ 237 (360)
++++|+++|++++. +|..|.||||+|+..|+. +++++|+..+ ... ....+.++||.|+..|+.+
T Consensus 573 ~v~~Ll~~gadin~---~d~~G~TpL~~A~~~g~~----------~iv~~L~~~~-~~~--~~~~~~~~L~~Aa~~g~~~ 636 (823)
T PLN03192 573 CVLVLLKHACNVHI---RDANGNTALWNAISAKHH----------KIFRILYHFA-SIS--DPHAAGDLLCTAAKRNDLT 636 (823)
T ss_pred HHHHHHhcCCCCCC---cCCCCCCHHHHHHHhCCH----------HHHHHHHhcC-ccc--CcccCchHHHHHHHhCCHH
Confidence 99999999999999 999999999999999999 9999999876 322 2356779999999999999
Q ss_pred HHHHHHhcCCccccccccCCCCchhhhhhcCCccc-ccccc--cccCccCCCCC-CcHHHHHHHcCCHH
Q 039483 238 ILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLA--SSLMDEGDAKG-NTTVHFFAAVHRKE 302 (360)
Q Consensus 238 ~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~--~~~~~~~d~~g-~Tpl~~A~~~~~~~ 302 (360)
++++|+++|+++ +.+|. +|.||||+|+..++.+ +++|+ +++++.+|..| .||++++......+
T Consensus 637 ~v~~Ll~~Gadi-n~~d~-~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~~~~~~g~~t~~~l~~~~~~~~ 703 (823)
T PLN03192 637 AMKELLKQGLNV-DSEDH-QGATALQVAMAEDHVDMVRLLIMNGADVDKANTDDDFSPTELRELLQKRE 703 (823)
T ss_pred HHHHHHHCCCCC-CCCCC-CCCCHHHHHHHCCcHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHHhh
Confidence 999999999999 99999 9999999999999999 88888 49999999988 99999986654443
|
|
| >KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.9e-23 Score=169.88 Aligned_cols=234 Identities=16% Similarity=0.122 Sum_probs=185.6
Q ss_pred CCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCc----------ccccc--ccccccccccCCCCCCCCChHHHHHHh
Q 039483 24 QIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRT----------QSCIS--TSNCRRQKMCQPVTAKGDTRSRHVAAK 91 (360)
Q Consensus 24 ~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t----------~~~v~--l~~~~~~~~~~~~~~~g~tp~Lh~A~~ 91 (360)
..-..++.++..|-.+.-..+... ........|+. .+.+. ...+ +.-. ..++.+|... +|.|+-
T Consensus 30 ~q~a~~~~~~~m~~t~p~~~l~~~-~s~~~~~lge~~~~~~~~s~nsd~~v~s~~~~-~~~~-~~t~p~g~~~-~~v~ap 105 (296)
T KOG0502|consen 30 TQIAELFEQVEMGTTEPRCALTAE-ISALRNALGESLLTVAVRSGNSDVAVQSAQLD-PDAI-DETDPEGWSA-LLVAAP 105 (296)
T ss_pred HHHHHHHHHhhccccchhHHHHHH-HHHHHHhcCCcccchhhhcCCcHHHHHhhccC-CCCC-CCCCchhhhh-hhhcCC
Confidence 334567888888877666666551 11111111111 23333 3344 4445 6778889999 999999
Q ss_pred cCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCc
Q 039483 92 FDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSH 171 (360)
Q Consensus 92 ~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~ 171 (360)
.|+...+..++.+|+..|. .+--+. +|+.+++...+ .+.+..+... .+|.
T Consensus 106 ~~s~~k~sttltN~~rgne------------------vs~~p~---------s~~slsVhql~-L~~~~~~~~n--~VN~ 155 (296)
T KOG0502|consen 106 CGSVDKVSTTLTNGARGNE------------------VSLMPW---------SPLSLSVHQLH-LDVVDLLVNN--KVNA 155 (296)
T ss_pred CCCcceeeeeecccccCCc------------------cccccC---------ChhhHHHHHHH-HHHHHHHhhc--cccC
Confidence 9999999999999988777 666665 56666666666 7666665554 5677
Q ss_pred cccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCcccc
Q 039483 172 IYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAK 251 (360)
Q Consensus 172 ~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~ 251 (360)
.|..|.|||.||+..|+. +++++|++.+ ++++...++..++|.+|++.|..++|++||.+++|+ |
T Consensus 156 ---~De~GfTpLiWAaa~G~i----------~vV~fLL~~G-Adp~~lgk~resALsLAt~ggytdiV~lLL~r~vdV-N 220 (296)
T KOG0502|consen 156 ---CDEFGFTPLIWAAAKGHI----------PVVQFLLNSG-ADPDALGKYRESALSLATRGGYTDIVELLLTREVDV-N 220 (296)
T ss_pred ---ccccCchHhHHHHhcCch----------HHHHHHHHcC-CChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCc-c
Confidence 899999999999999999 9999999999 889999999999999999999999999999999999 9
Q ss_pred ccccCCCCchhhhhhcCCccc-ccccc--cccCccCCCCCCcHHHHHHHcCCHHHHHHHh
Q 039483 252 IADKDRKMTALHLVHGPKGCQ-NNMLA--SSLMDEGDAKGNTTVHFFAAVHRKEIFDDLS 308 (360)
Q Consensus 252 ~~d~~~g~tpLh~A~~~~~~~-~~~L~--~~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~ 308 (360)
..|- +|.|||.+|++.++.+ ++.|+ +++++.-+..|++++++|+..|+. +++.++
T Consensus 221 vyDw-NGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~~mdlAValGyr-~Vqqvi 278 (296)
T KOG0502|consen 221 VYDW-NGGTPLLYAVRGNHVKCVESLLNSGADVTQEDDSGYWIMDLAVALGYR-IVQQVI 278 (296)
T ss_pred eecc-CCCceeeeeecCChHHHHHHHHhcCCCcccccccCCcHHHHHHHhhhH-HHHHHH
Confidence 9999 9999999999999999 88888 499999999999999999999998 444333
|
|
| >KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.3e-22 Score=191.70 Aligned_cols=209 Identities=19% Similarity=0.113 Sum_probs=181.4
Q ss_pred CCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHH
Q 039483 23 PQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLI 102 (360)
Q Consensus 23 ~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll 102 (360)
..++|.||.|+.+|+.++.+.|++. ...+ +..|.+|.+| ||+|+..|+.+++++++
T Consensus 47 ~~gfTalhha~Lng~~~is~llle~----------------------ea~l-dl~d~kg~~p-lhlaaw~g~~e~vkmll 102 (854)
T KOG0507|consen 47 YSGFTLLHHAVLNGQNQISKLLLDY----------------------EALL-DLCDTKGILP-LHLAAWNGNLEIVKMLL 102 (854)
T ss_pred ccchhHHHHHHhcCchHHHHHHhcc----------------------hhhh-hhhhccCcce-EEehhhcCcchHHHHHH
Confidence 3678999999999999999999884 4455 6778999999 99999999999999999
Q ss_pred HhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcH
Q 039483 103 ERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQA 182 (360)
Q Consensus 103 ~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~ 182 (360)
.++..++. .+..| .||||.|+++|+ .+++.+|+.+|+++-. +++.+.|+
T Consensus 103 ~q~d~~na------------------~~~e~---------~tplhlaaqhgh-~dvv~~Ll~~~adp~i---~nns~~t~ 151 (854)
T KOG0507|consen 103 LQTDILNA------------------VNIEN---------ETPLHLAAQHGH-LEVVFYLLKKNADPFI---RNNSKETV 151 (854)
T ss_pred hcccCCCc------------------ccccC---------cCccchhhhhcc-hHHHHHHHhcCCCccc---cCcccccH
Confidence 99977777 77776 488899999999 9999999999999988 99999999
Q ss_pred HHHHHhcCCcccccccCChHHHHHHHHhcCcc-------ccccccCCCChHHHHHHHcCCHHHHHHHHhcCCcccccccc
Q 039483 183 LHAATMHIDLCKFNHTLSNDCAVQQLFEGKKS-------MIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADK 255 (360)
Q Consensus 183 Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~-------~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~ 255 (360)
|..|++.|.. ++++.|+...-. .-..++..+-+|||+|+++|+.++++.|++.|.++ +...+
T Consensus 152 ldlA~qfgr~----------~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~di-n~~t~ 220 (854)
T KOG0507|consen 152 LDLASRFGRA----------EVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGFDI-NYTTE 220 (854)
T ss_pred HHHHHHhhhh----------HHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCCCc-ccccc
Confidence 9999999999 999999876310 01234567889999999999999999999999999 88776
Q ss_pred CCCCchhhhhhcCCccc-ccccc--cccCccCCCCCCcHHHHHHHcC
Q 039483 256 DRKMTALHLVHGPKGCQ-NNMLA--SSLMDEGDAKGNTTVHFFAAVH 299 (360)
Q Consensus 256 ~~g~tpLh~A~~~~~~~-~~~L~--~~~~~~~d~~g~Tpl~~A~~~~ 299 (360)
. .|+||.|+.-|..+ +.+|+ +.+..++|.+|+|+|++-...-
T Consensus 221 -~-gtalheaalcgk~evvr~ll~~gin~h~~n~~~qtaldil~d~~ 265 (854)
T KOG0507|consen 221 -D-GTALHEAALCGKAEVVRFLLEIGINTHIKNQHGQTALDIIIDLQ 265 (854)
T ss_pred -c-chhhhhHhhcCcchhhhHHHhhccccccccccchHHHHHHHhcc
Confidence 4 49999999999888 88887 4788899999999999876543
|
|
| >KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.6e-21 Score=179.66 Aligned_cols=213 Identities=17% Similarity=0.167 Sum_probs=169.8
Q ss_pred HHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHhccc
Q 039483 28 NLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIERAKL 107 (360)
Q Consensus 28 ~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~ 107 (360)
.+..|+.+|+.+.++.|+.. +... +..|.+|.|+ ||.+|+..|.+||++|+++|++
T Consensus 43 ~~l~A~~~~d~~ev~~ll~~----------------------ga~~-~~~n~DglTa-lhq~~id~~~e~v~~l~e~ga~ 98 (527)
T KOG0505|consen 43 VFLEACSRGDLEEVRKLLNR----------------------GASP-NLCNVDGLTA-LHQACIDDNLEMVKFLVENGAN 98 (527)
T ss_pred HHHhccccccHHHHHHHhcc----------------------CCCc-cccCCccchh-HHHHHhcccHHHHHHHHHhcCC
Confidence 47779999999999999884 4444 7788999999 9999999999999999999999
Q ss_pred cCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHH
Q 039483 108 VQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAAT 187 (360)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~ 187 (360)
++. .|.+|+ ||||.|+..|+ ..++++|+++|+++.. .+..|..|+..+.
T Consensus 99 Vn~------------------~d~e~w---------tPlhaaascg~-~~i~~~li~~gA~~~a---vNsdg~~P~dl~e 147 (527)
T KOG0505|consen 99 VNA------------------QDNEGW---------TPLHAAASCGY-LNIVEYLIQHGANLLA---VNSDGNMPYDLAE 147 (527)
T ss_pred ccc------------------cccccC---------Ccchhhccccc-HHHHHHHHHhhhhhhh---ccCCCCCcccccc
Confidence 998 888885 77777788899 9999999999998877 7777776654332
Q ss_pred hcCCc-------ccccccCC------hHHH---HHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCcccc
Q 039483 188 MHIDL-------CKFNHTLS------NDCA---VQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAK 251 (360)
Q Consensus 188 ~~~~~-------~~~~~~~~------~~~~---~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~ 251 (360)
.-... .+...++. ...+ +...+..+ ...+..+..|.|+||.|+.+|..++.++|++.|.++ +
T Consensus 148 ~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G-~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~-~ 225 (527)
T KOG0505|consen 148 DEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAG-AELDARHARGATALHVAAANGYTEVAALLLQAGYSV-N 225 (527)
T ss_pred CcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhcc-ccccccccccchHHHHHHhhhHHHHHHHHHHhccCc-c
Confidence 21111 00000111 0011 22333355 556667777999999999999999999999999999 9
Q ss_pred ccccCCCCchhhhhhcCCccc-ccccc--cccCccCCCCCCcHHHHHHHc
Q 039483 252 IADKDRKMTALHLVHGPKGCQ-NNMLA--SSLMDEGDAKGNTTVHFFAAV 298 (360)
Q Consensus 252 ~~d~~~g~tpLh~A~~~~~~~-~~~L~--~~~~~~~d~~g~Tpl~~A~~~ 298 (360)
.+|. +|+||||.|+.++..+ .++|+ +++++.....|.||+.+|...
T Consensus 226 ~~D~-dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~g~~p~dv~dee 274 (527)
T KOG0505|consen 226 IKDY-DGWTPLHAAAHWGQEDACELLVEHGADMDAKTKMGETPLDVADEE 274 (527)
T ss_pred cccc-cCCCcccHHHHhhhHhHHHHHHHhhcccchhhhcCCCCccchhhh
Confidence 9999 9999999999999999 77776 499999999999999999763
|
|
| >KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.9e-22 Score=163.31 Aligned_cols=220 Identities=17% Similarity=0.083 Sum_probs=171.4
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCC--c----------ccccc-ccccccccccCCCCCCCCChHHHHHHh
Q 039483 25 IDPNLFKVAAAGNLEPFKDMAREVIESLLTARSR--T----------QSCIS-TSNCRRQKMCQPVTAKGDTRSRHVAAK 91 (360)
Q Consensus 25 ~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~--t----------~~~v~-l~~~~~~~~~~~~~~~g~tp~Lh~A~~ 91 (360)
+++.+-.|..+|+.+..+..+..+.+....++.. . .+.+. +..+ +... +..+.-+.+| +.+++.
T Consensus 62 ge~~~~~~~~s~nsd~~v~s~~~~~~~~~~t~p~g~~~~~v~ap~~s~~k~sttltN-~~rg-nevs~~p~s~-~slsVh 138 (296)
T KOG0502|consen 62 GESLLTVAVRSGNSDVAVQSAQLDPDAIDETDPEGWSALLVAAPCGSVDKVSTTLTN-GARG-NEVSLMPWSP-LSLSVH 138 (296)
T ss_pred CCcccchhhhcCCcHHHHHhhccCCCCCCCCCchhhhhhhhcCCCCCcceeeeeecc-cccC-CccccccCCh-hhHHHH
Confidence 3344556777788777777666333322111111 0 33333 5556 6777 7788889999 999998
Q ss_pred cCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCc
Q 039483 92 FDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSH 171 (360)
Q Consensus 92 ~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~ 171 (360)
.-+.+.+..+.++- +|. .|+.|. |||.+|+..|+ +++|++|+..|+++..
T Consensus 139 ql~L~~~~~~~~n~--VN~------------------~De~Gf---------TpLiWAaa~G~-i~vV~fLL~~GAdp~~ 188 (296)
T KOG0502|consen 139 QLHLDVVDLLVNNK--VNA------------------CDEFGF---------TPLIWAAAKGH-IPVVQFLLNSGADPDA 188 (296)
T ss_pred HHHHHHHHHHhhcc--ccC------------------ccccCc---------hHhHHHHhcCc-hHHHHHHHHcCCChhh
Confidence 88888777666533 333 788885 88888899999 9999999999999998
Q ss_pred cccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCcccc
Q 039483 172 IYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAK 251 (360)
Q Consensus 172 ~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~ 251 (360)
..+...++|..|++.|.. +++++|+... .++|.-|.+|-|||-+|++-|+.+|++.|+..|+++ +
T Consensus 189 ---lgk~resALsLAt~ggyt----------diV~lLL~r~-vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~-t 253 (296)
T KOG0502|consen 189 ---LGKYRESALSLATRGGYT----------DIVELLLTRE-VDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGADV-T 253 (296)
T ss_pred ---hhhhhhhhHhHHhcCChH----------HHHHHHHhcC-CCcceeccCCCceeeeeecCChHHHHHHHHhcCCCc-c
Confidence 888889999999999999 9999999998 779999999999999999999999999999999999 8
Q ss_pred ccccCCCCchhhhhhcCCccccccccc--ccCccCCCCCCcHHH
Q 039483 252 IADKDRKMTALHLVHGPKGCQNNMLAS--SLMDEGDAKGNTTVH 293 (360)
Q Consensus 252 ~~d~~~g~tpLh~A~~~~~~~~~~L~~--~~~~~~d~~g~Tpl~ 293 (360)
..+. .|++++.+|+..|+..++..+. ++...+|+.-.||+|
T Consensus 254 ~e~d-sGy~~mdlAValGyr~Vqqvie~h~lkl~Q~~~~~~~~~ 296 (296)
T KOG0502|consen 254 QEDD-SGYWIMDLAVALGYRIVQQVIEKHALKLCQDSEKRTPLH 296 (296)
T ss_pred cccc-cCCcHHHHHHHhhhHHHHHHHHHHHHHHhhcccCCCCCC
Confidence 8888 9999999999888777666664 666677777667654
|
|
| >PHA02743 Viral ankyrin protein; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.9e-20 Score=155.99 Aligned_cols=143 Identities=9% Similarity=0.060 Sum_probs=123.5
Q ss_pred cccccCCCCCCCCChHHHHHHhcCCH----HHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCH
Q 039483 70 RQKMCQPVTAKGDTRSRHVAAKFDHC----DIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIP 145 (360)
Q Consensus 70 ~~~~~~~~~~~g~tp~Lh~A~~~g~~----~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~ 145 (360)
+.++ ...+.++.++ +|.||+.|+. +++++|++.|++++. +|..|. ||
T Consensus 10 ~~~~-~~~~~~~~~~-l~~a~~~g~~~~l~~~~~~l~~~g~~~~~------------------~d~~g~---------t~ 60 (166)
T PHA02743 10 NLGA-VEIDEDEQNT-FLRICRTGNIYELMEVAPFISGDGHLLHR------------------YDHHGR---------QC 60 (166)
T ss_pred chHH-hhhccCCCcH-HHHHHHcCCHHHHHHHHHHHhhcchhhhc------------------cCCCCC---------cH
Confidence 4455 6678888999 9999999998 666778888887776 788886 77
Q ss_pred HHHHHhcCCcHH---HHHHHHhhCCCCCccccCC-CCCCcHHHHHHhcCCcccccccCChHHHHHHHHh-cCcccccccc
Q 039483 146 LCMAAEYEHSSH---TVVAILKSCTSVSHIYMKA-PMERQALHAATMHIDLCKFNHTLSNDCAVQQLFE-GKKSMIKGID 220 (360)
Q Consensus 146 L~~A~~~g~~~~---~~~~Ll~~g~~~~~~~~~d-~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~-~~~~~i~~~d 220 (360)
||+|+..|+ .+ ++++|++.|++++. ++ ..|.||||+|+..++. +++++|+. .+ .+++.+|
T Consensus 61 Lh~Aa~~g~-~~~~~~i~~Ll~~Gadin~---~d~~~g~TpLh~A~~~g~~----------~iv~~Ll~~~g-ad~~~~d 125 (166)
T PHA02743 61 THMVAWYDR-ANAVMKIELLVNMGADINA---RELGTGNTLLHIAASTKNY----------ELAEWLCRQLG-VNLGAIN 125 (166)
T ss_pred HHHHHHhCc-cCHHHHHHHHHHcCCCCCC---CCCCCCCcHHHHHHHhCCH----------HHHHHHHhccC-CCccCcC
Confidence 777777776 54 48999999999999 88 4899999999999999 99999996 56 8889999
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCC
Q 039483 221 QCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRK 258 (360)
Q Consensus 221 ~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g 258 (360)
..|+||||+|+..++.+++++|+++|+++ +.++. .|
T Consensus 126 ~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~-~~~~~-~~ 161 (166)
T PHA02743 126 YQHETAYHIAYKMRDRRMMEILRANGAVC-DDPLS-IG 161 (166)
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCccc-CC
Confidence 99999999999999999999999999999 77776 55
|
|
| >PHA02741 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.8e-20 Score=154.30 Aligned_cols=134 Identities=16% Similarity=0.152 Sum_probs=115.2
Q ss_pred CCCCCCCCChHHHHHHhcCCHHHHHHHHHh------ccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHH
Q 039483 75 QPVTAKGDTRSRHVAAKFDHCDIVSVLIER------AKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCM 148 (360)
Q Consensus 75 ~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~------g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~ 148 (360)
+.+|..|.|| ||+|++.|+.++++.|+.. |++++. +|..|. ||||+
T Consensus 15 ~~~~~~g~t~-Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~------------------~d~~g~---------T~Lh~ 66 (169)
T PHA02741 15 AEKNSEGENF-FHEAARCGCFDIIARFTPFIRGDCHAAALNA------------------TDDAGQ---------MCIHI 66 (169)
T ss_pred hccccCCCCH-HHHHHHcCCHHHHHHHHHHhccchhhhhhhc------------------cCCCCC---------cHHHH
Confidence 6678899999 9999999999999998643 455554 888886 66677
Q ss_pred HHhcCCc---HHHHHHHHhhCCCCCccccCCC-CCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCC
Q 039483 149 AAEYEHS---SHTVVAILKSCTSVSHIYMKAP-MERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWW 224 (360)
Q Consensus 149 A~~~g~~---~~~~~~Ll~~g~~~~~~~~~d~-~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~ 224 (360)
|+..|+. .+++++|++.|++++. ++. .|.||||+|+..++. +++++|+.....+++..|..|+
T Consensus 67 A~~~g~~~~~~~ii~~Ll~~gadin~---~~~~~g~TpLh~A~~~~~~----------~iv~~Ll~~~g~~~~~~n~~g~ 133 (169)
T PHA02741 67 AAEKHEAQLAAEIIDHLIELGADINA---QEMLEGDTALHLAAHRRDH----------DLAEWLCCQPGIDLHFCNADNK 133 (169)
T ss_pred HHHcCChHHHHHHHHHHHHcCCCCCC---CCcCCCCCHHHHHHHcCCH----------HHHHHHHhCCCCCCCcCCCCCC
Confidence 7777761 2789999999999998 885 899999999999999 9999999853378999999999
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCcc
Q 039483 225 TPIHYAAYHRNYLILKLILKIDRTA 249 (360)
Q Consensus 225 t~Lh~A~~~~~~~~v~~Ll~~g~~~ 249 (360)
||||+|+..++.+++++|++.++..
T Consensus 134 tpL~~A~~~~~~~iv~~L~~~~~~~ 158 (169)
T PHA02741 134 SPFELAIDNEDVAMMQILREIVATS 158 (169)
T ss_pred CHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 9999999999999999999887654
|
|
| >PHA02884 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.2e-19 Score=164.33 Aligned_cols=155 Identities=15% Similarity=0.072 Sum_probs=132.0
Q ss_pred hhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCC----CCCCcHHHHHHhcCCcccccccCCh
Q 039483 126 IRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKA----PMERQALHAATMHIDLCKFNHTLSN 201 (360)
Q Consensus 126 l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d----~~g~t~Lh~A~~~~~~~~~~~~~~~ 201 (360)
+..+|..|. .++||.|+..|+ .+++++|+++|++++. ++ ..|.||||+|+..++.
T Consensus 25 ~~~~d~~~~--------~~lL~~A~~~~~-~eivk~LL~~GAdiN~---~~~~sd~~g~TpLh~Aa~~~~~--------- 83 (300)
T PHA02884 25 IKKKNKICI--------ANILYSSIKFHY-TDIIDAILKLGADPEA---PFPLSENSKTNPLIYAIDCDND--------- 83 (300)
T ss_pred hhccCcCCC--------CHHHHHHHHcCC-HHHHHHHHHCCCCccc---cCcccCCCCCCHHHHHHHcCCH---------
Confidence 445788876 356777888899 9999999999999998 64 5899999999999999
Q ss_pred HHHHHHHHhcCccccccc-cCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-ccccccc
Q 039483 202 DCAVQQLFEGKKSMIKGI-DQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLASS 279 (360)
Q Consensus 202 ~~~~~~Ll~~~~~~i~~~-d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~~~ 279 (360)
+++++|+++| ++++.. +..|.||||+|+..++.+++++|++.|+++ +.+|. .|.||||+|+..++.+ ...+.+.
T Consensus 84 -eivklLL~~G-ADVN~~~~~~g~TpLh~Aa~~~~~eivklLL~~GAdi-n~kd~-~G~TpL~~A~~~~~~~~~~~~~~~ 159 (300)
T PHA02884 84 -DAAKLLIRYG-ADVNRYAEEAKITPLYISVLHGCLKCLEILLSYGADI-NIQTN-DMVTPIELALMICNNFLAFMICDN 159 (300)
T ss_pred -HHHHHHHHcC-CCcCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCC-CCCCHHHHHHHhCChhHHHHhcCC
Confidence 9999999999 889986 568999999999999999999999999999 99999 9999999998876666 4333332
Q ss_pred cCccCCCCCCcHHHHHHHcCCHHHHHHHhhhh
Q 039483 280 LMDEGDAKGNTTVHFFAAVHRKEIFDDLSGRV 311 (360)
Q Consensus 280 ~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~~ 311 (360)
..+..+.+|.+++ ++.++++.|.++.
T Consensus 160 ---~~~~~~~~~~~~~---~n~ei~~~Lish~ 185 (300)
T PHA02884 160 ---EISNFYKHPKKIL---INFDILKILVSHF 185 (300)
T ss_pred ---cccccccChhhhh---ccHHHHHHHHHHH
Confidence 2567788999975 4788999888874
|
|
| >PHA02736 Viral ankyrin protein; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.4e-19 Score=150.07 Aligned_cols=138 Identities=9% Similarity=0.133 Sum_probs=110.4
Q ss_pred CCCCCCCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCC
Q 039483 75 QPVTAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEH 154 (360)
Q Consensus 75 ~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~ 154 (360)
+.+|..|.|| ||+||+.|+. +.++...+...+. ...+++..|..|.|| ||+|+..|+
T Consensus 11 ~~~d~~g~tp-Lh~A~~~g~~--~~l~~~~~~~~~~-----------~~~~~~~~d~~g~t~---------Lh~a~~~~~ 67 (154)
T PHA02736 11 SEPDIEGENI-LHYLCRNGGV--TDLLAFKNAISDE-----------NRYLVLEYNRHGKQC---------VHIVSNPDK 67 (154)
T ss_pred HhcCCCCCCH-HHHHHHhCCH--HHHHHHHHHhcch-----------hHHHHHHhcCCCCEE---------EEeecccCc
Confidence 6778899999 9999999983 4444444332221 013344578888755 555555665
Q ss_pred cH---HHHHHHHhhCCCCCccccCC-CCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHH
Q 039483 155 SS---HTVVAILKSCTSVSHIYMKA-PMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYA 230 (360)
Q Consensus 155 ~~---~~~~~Ll~~g~~~~~~~~~d-~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A 230 (360)
. +++++|++.|++++. ++ ..|.||||+|+..++. +++++|+.....+++..|..|+||||+|
T Consensus 68 -~~~~e~v~~Ll~~gadin~---~~~~~g~T~Lh~A~~~~~~----------~i~~~Ll~~~g~d~n~~~~~g~tpL~~A 133 (154)
T PHA02736 68 -ADPQEKLKLLMEWGADING---KERVFGNTPLHIAVYTQNY----------ELATWLCNQPGVNMEILNYAFKTPYYVA 133 (154)
T ss_pred -hhHHHHHHHHHHcCCCccc---cCCCCCCcHHHHHHHhCCH----------HHHHHHHhCCCCCCccccCCCCCHHHHH
Confidence 5 578999999999999 88 4899999999999999 9999999853388999999999999999
Q ss_pred HHcCCHHHHHHHHhcCCcc
Q 039483 231 AYHRNYLILKLILKIDRTA 249 (360)
Q Consensus 231 ~~~~~~~~v~~Ll~~g~~~ 249 (360)
+..|+.+++++|++.|++.
T Consensus 134 ~~~~~~~i~~~Ll~~ga~~ 152 (154)
T PHA02736 134 CERHDAKMMNILRAKGAQC 152 (154)
T ss_pred HHcCCHHHHHHHHHcCCCC
Confidence 9999999999999999876
|
|
| >KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.9e-20 Score=175.50 Aligned_cols=230 Identities=16% Similarity=0.074 Sum_probs=189.4
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHH-HhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHH
Q 039483 25 IDPNLFKVAAAGNLEPFKDMAREV-IESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIE 103 (360)
Q Consensus 25 ~~~~L~~Aa~~G~~~~~~~ll~~~-~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~ 103 (360)
.++.|..|+.+||++.+..|++.. .... -. +...|+... +..|.+|.|. ||.||.+|+.+++++|++
T Consensus 3 k~qel~~a~ka~d~~tva~ll~~~~~r~~-~l---------~~~trsds~-n~qd~~gfTa-lhha~Lng~~~is~llle 70 (854)
T KOG0507|consen 3 KKQELIDACKAGDYDTVALLLSSKKGRSG-LL---------FFTTRSDSH-NLQDYSGFTL-LHHAVLNGQNQISKLLLD 70 (854)
T ss_pred hhhhHHHhhhcccHHHHHHhccCCCCCCC-CC---------CCCCCCccc-cccCccchhH-HHHHHhcCchHHHHHHhc
Confidence 346688999999999999999821 1110 00 001113445 7788899999 999999999999999999
Q ss_pred hccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHH
Q 039483 104 RAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQAL 183 (360)
Q Consensus 104 ~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~L 183 (360)
..+-++. .|..|. +|||+|+..|+ .++++.++.++..++. ....|.|||
T Consensus 71 ~ea~ldl------------------~d~kg~---------~plhlaaw~g~-~e~vkmll~q~d~~na---~~~e~~tpl 119 (854)
T KOG0507|consen 71 YEALLDL------------------CDTKGI---------LPLHLAAWNGN-LEIVKMLLLQTDILNA---VNIENETPL 119 (854)
T ss_pred chhhhhh------------------hhccCc---------ceEEehhhcCc-chHHHHHHhcccCCCc---ccccCcCcc
Confidence 9887776 666664 88888899999 9999999999988888 888999999
Q ss_pred HHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccc-------cccccC
Q 039483 184 HAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAA-------KIADKD 256 (360)
Q Consensus 184 h~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~-------~~~d~~ 256 (360)
|.|+..|+. +++.+|+.++ +++-..|..+.|+|-+|++.|+.++++.|++....+. ..++-
T Consensus 120 hlaaqhgh~----------dvv~~Ll~~~-adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~- 187 (854)
T KOG0507|consen 120 HLAAQHGHL----------EVVFYLLKKN-ADPFIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPF- 187 (854)
T ss_pred chhhhhcch----------HHHHHHHhcC-CCccccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCC-
Confidence 999999999 9999999999 8888899999999999999999999999997633221 23344
Q ss_pred CCCchhhhhhcCCccc-cccccc--ccCccCCCCCCcHHHHHHHcCCHHHHHHHhhh
Q 039483 257 RKMTALHLVHGPKGCQ-NNMLAS--SLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGR 310 (360)
Q Consensus 257 ~g~tpLh~A~~~~~~~-~~~L~~--~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~ 310 (360)
.+-+|+|+|+.+++.+ ++.|+. .++|...+. -|+||.|+.+|..+++..|++.
T Consensus 188 ~~~~plHlaakngh~~~~~~ll~ag~din~~t~~-gtalheaalcgk~evvr~ll~~ 243 (854)
T KOG0507|consen 188 PAIYPLHLAAKNGHVECMQALLEAGFDINYTTED-GTALHEAALCGKAEVVRFLLEI 243 (854)
T ss_pred CCcCCcchhhhcchHHHHHHHHhcCCCccccccc-chhhhhHhhcCcchhhhHHHhh
Confidence 7889999999999999 888874 777766554 4899999999999999988875
|
|
| >PHA02884 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.3e-19 Score=160.66 Aligned_cols=156 Identities=15% Similarity=0.107 Sum_probs=127.9
Q ss_pred CCCCCCCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCC
Q 039483 75 QPVTAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEH 154 (360)
Q Consensus 75 ~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~ 154 (360)
..+|..|.|+.||.|+..|+.+++++|+++|++++..+. ..+..|. ||||+|+..++
T Consensus 26 ~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~--------------~sd~~g~---------TpLh~Aa~~~~ 82 (300)
T PHA02884 26 KKKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFP--------------LSENSKT---------NPLIYAIDCDN 82 (300)
T ss_pred hccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCc--------------ccCCCCC---------CHHHHHHHcCC
Confidence 457778888758888889999999999999999987210 0134664 88888899999
Q ss_pred cHHHHHHHHhhCCCCCccccCC-CCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHc
Q 039483 155 SSHTVVAILKSCTSVSHIYMKA-PMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYH 233 (360)
Q Consensus 155 ~~~~~~~Ll~~g~~~~~~~~~d-~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~ 233 (360)
.+++++|+++|++++. ++ ..|.||||+|+..++. +++++|+..+ ++++.+|..|.||||+|+..
T Consensus 83 -~eivklLL~~GADVN~---~~~~~g~TpLh~Aa~~~~~----------eivklLL~~G-Adin~kd~~G~TpL~~A~~~ 147 (300)
T PHA02884 83 -DDAAKLLIRYGADVNR---YAEEAKITPLYISVLHGCL----------KCLEILLSYG-ADINIQTNDMVTPIELALMI 147 (300)
T ss_pred -HHHHHHHHHcCCCcCc---ccCCCCCCHHHHHHHcCCH----------HHHHHHHHCC-CCCCCCCCCCCCHHHHHHHh
Confidence 9999999999999998 64 5799999999999999 9999999999 88999999999999999999
Q ss_pred CCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-cccccc
Q 039483 234 RNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLAS 278 (360)
Q Consensus 234 ~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~~ 278 (360)
++..++..+...+. +. .+.+|.+++. +.+ +++|++
T Consensus 148 ~~~~~~~~~~~~~~------~~-~~~~~~~~~~---n~ei~~~Lis 183 (300)
T PHA02884 148 CNNFLAFMICDNEI------SN-FYKHPKKILI---NFDILKILVS 183 (300)
T ss_pred CChhHHHHhcCCcc------cc-cccChhhhhc---cHHHHHHHHH
Confidence 98888766654333 33 7788888752 345 666665
|
|
| >TIGR00870 trp transient-receptor-potential calcium channel protein | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.4e-19 Score=181.88 Aligned_cols=215 Identities=18% Similarity=0.073 Sum_probs=154.3
Q ss_pred CCCCCCHHHH-HHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHH
Q 039483 21 SQPQIDPNLF-KVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVS 99 (360)
Q Consensus 21 ~~~~~~~~L~-~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~ 99 (360)
....+.+||| .|+..|+.++++.|++. ...+..|+|| ||.|+. ++.+.++
T Consensus 48 ~d~~G~t~Lh~~A~~~~~~eiv~lLl~~---------------------------g~~~~~G~T~-Lh~A~~-~~~~~v~ 98 (743)
T TIGR00870 48 PDRLGRSALFVAAIENENLELTELLLNL---------------------------SCRGAVGDTL-LHAISL-EYVDAVE 98 (743)
T ss_pred cCccchhHHHHHHHhcChHHHHHHHHhC---------------------------CCCCCcChHH-HHHHHh-ccHHHHH
Confidence 4467889999 78888888888888762 1146789999 999987 3334444
Q ss_pred HHHHhccccCcccccccccchhhHHHhh----cccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccC
Q 039483 100 VLIERAKLVQHEDEELESGVGASRQMIR----MTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMK 175 (360)
Q Consensus 100 ~Ll~~g~~~~~~~~~~~~~~~~~~~~l~----~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~ 175 (360)
.++....+....+... .+.+ ..+..| .||||+|+..|+ .++++.|+++|++++. +
T Consensus 99 ~ll~~l~~~~~~~~~~--------~~~~~~~~~~~~~G---------~TpLhlAa~~~~-~eiVklLL~~GAdv~~---~ 157 (743)
T TIGR00870 99 AILLHLLAAFRKSGPL--------ELANDQYTSEFTPG---------ITALHLAAHRQN-YEIVKLLLERGASVPA---R 157 (743)
T ss_pred HHHHHHhhcccccCch--------hhhccccccccCCC---------CcHHHHHHHhCC-HHHHHHHHhCCCCCCc---C
Confidence 4433322211100000 0011 122345 488899999999 9999999999999886 4
Q ss_pred C--------------CCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcC-------
Q 039483 176 A--------------PMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHR------- 234 (360)
Q Consensus 176 d--------------~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~------- 234 (360)
+ ..|+||||.|+..++. +++++|++.+ ++++..|..|+||||+|+..+
T Consensus 158 ~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~----------~iv~lLl~~g-adin~~d~~g~T~Lh~A~~~~~~~~~~~ 226 (743)
T TIGR00870 158 ACGDFFVKSQGVDSFYHGESPLNAAACLGSP----------SIVALLSEDP-ADILTADSLGNTLLHLLVMENEFKAEYE 226 (743)
T ss_pred cCCchhhcCCCCCcccccccHHHHHHHhCCH----------HHHHHHhcCC-cchhhHhhhhhHHHHHHHhhhhhhHHHH
Confidence 2 2589999999999999 9999999988 889999999999999999987
Q ss_pred --CHHHHHHHHhcCCccc------cccccCCCCchhhhhhcCCccc-cccccc--ccCccCCCCCCcHHHHHHH
Q 039483 235 --NYLILKLILKIDRTAA------KIADKDRKMTALHLVHGPKGCQ-NNMLAS--SLMDEGDAKGNTTVHFFAA 297 (360)
Q Consensus 235 --~~~~v~~Ll~~g~~~~------~~~d~~~g~tpLh~A~~~~~~~-~~~L~~--~~~~~~d~~g~Tpl~~A~~ 297 (360)
...+.+++++.+.... +..|. +|.||||+|+..++.+ ++.|+. .........++.|.+.+..
T Consensus 227 ~l~~~~~~~l~~ll~~~~~~~el~~i~N~-~g~TPL~~A~~~g~~~l~~lLL~~~~~~kk~~a~~~~~~~~~~~ 299 (743)
T TIGR00870 227 ELSCQMYNFALSLLDKLRDSKELEVILNH-QGLTPLKLAAKEGRIVLFRLKLAIKYKQKKFVAWPNGQQLLSLY 299 (743)
T ss_pred HHHHHHHHHHHHHHhccCChHhhhhhcCC-CCCCchhhhhhcCCccHHHHHHHHHHhcceeeccCcchHhHhhh
Confidence 2346667766655431 34688 9999999999999998 777775 3333344566777776654
|
after chronic exposure to capsaicin. (McCleskey and Gold, 1999). |
| >KOG0514 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.80 E-value=3e-19 Score=158.47 Aligned_cols=168 Identities=18% Similarity=0.154 Sum_probs=143.2
Q ss_pred hhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhC-CCCCccccCCCCCCcHHHHHHhcCCcccccccC
Q 039483 121 ASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSC-TSVSHIYMKAPMERQALHAATMHIDLCKFNHTL 199 (360)
Q Consensus 121 ~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g-~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~ 199 (360)
+++..+|..|.+|+|+|||+ +.+++ .++|+.||+.| ++++. .+..|.||++.++...-. ..
T Consensus 256 lL~yvVNlaDsNGNTALHYs---------VSHaN-F~VV~~LLDSgvC~VD~---qNrAGYtpiMLaALA~lk-----~~ 317 (452)
T KOG0514|consen 256 LLEYVVNLADSNGNTALHYA---------VSHAN-FDVVSILLDSGVCDVDQ---QNRAGYTPVMLAALAKLK-----QP 317 (452)
T ss_pred HHHHHhhhhcCCCCeeeeee---------ecccc-hHHHHHHhccCcccccc---cccccccHHHHHHHHhhc-----ch
Confidence 44566888999998666665 45677 99999999988 68999 999999999988755322 01
Q ss_pred ChHHHHHHHHhcCccccccc-cCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-ccccc
Q 039483 200 SNDCAVQQLFEGKKSMIKGI-DQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLA 277 (360)
Q Consensus 200 ~~~~~~~~Ll~~~~~~i~~~-d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~ 277 (360)
...++|..|...+ ++|.+ ...|.|+|++|+.+|+.++++.||..|+|+ |++|. +|-|+|+.|+.+|+.| +++|+
T Consensus 318 ~d~~vV~~LF~mg--nVNaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAdV-NiQDd-DGSTALMCA~EHGhkEivklLL 393 (452)
T KOG0514|consen 318 ADRTVVERLFKMG--DVNAKASQHGQTALMLAVSHGRVDMVKALLACGADV-NIQDD-DGSTALMCAAEHGHKEIVKLLL 393 (452)
T ss_pred hhHHHHHHHHhcc--CcchhhhhhcchhhhhhhhcCcHHHHHHHHHccCCC-ccccC-CccHHHhhhhhhChHHHHHHHh
Confidence 1227888888776 35655 468999999999999999999999999999 99999 9999999999999999 88888
Q ss_pred c---ccCccCCCCCCcHHHHHHHcCCHHHHHHHhhh
Q 039483 278 S---SLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGR 310 (360)
Q Consensus 278 ~---~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~ 310 (360)
. .+....|.+|-|+|.+|-..|+.||.-.|..+
T Consensus 394 A~p~cd~sLtD~DgSTAl~IAleagh~eIa~mlYa~ 429 (452)
T KOG0514|consen 394 AVPSCDISLTDVDGSTALSIALEAGHREIAVMLYAH 429 (452)
T ss_pred ccCcccceeecCCCchhhhhHHhcCchHHHHHHHHH
Confidence 3 89999999999999999999999999988776
|
|
| >KOG0514 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.7e-19 Score=159.97 Aligned_cols=163 Identities=23% Similarity=0.192 Sum_probs=137.6
Q ss_pred cccCCCCCCCCChHHHHHHhcCCHHHHHHHHHhc-cccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHH
Q 039483 72 KMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIERA-KLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAA 150 (360)
Q Consensus 72 ~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~ 150 (360)
.+ +.-|.+|+|+ ||||+.++|+++|+.|++.| +++|. +|..|-||.+.++ |-.--
T Consensus 260 vV-NlaDsNGNTA-LHYsVSHaNF~VV~~LLDSgvC~VD~------------------qNrAGYtpiMLaA----LA~lk 315 (452)
T KOG0514|consen 260 VV-NLADSNGNTA-LHYAVSHANFDVVSILLDSGVCDVDQ------------------QNRAGYTPVMLAA----LAKLK 315 (452)
T ss_pred Hh-hhhcCCCCee-eeeeecccchHHHHHHhccCcccccc------------------cccccccHHHHHH----HHhhc
Confidence 46 8899999999 99999999999999999998 68887 8999976666553 10000
Q ss_pred hcCCcHHHHHHHHhhCCCCCccccCC-CCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHH
Q 039483 151 EYEHSSHTVVAILKSCTSVSHIYMKA-PMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHY 229 (360)
Q Consensus 151 ~~g~~~~~~~~Ll~~g~~~~~~~~~d-~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~ 229 (360)
...+ .++|..|..-| ++|. +. ..|+|+|+.|+..|.. ++++.|+.-+ +++|.+|.+|.|+|++
T Consensus 316 ~~~d-~~vV~~LF~mg-nVNa---KAsQ~gQTALMLAVSHGr~----------d~vk~LLacg-AdVNiQDdDGSTALMC 379 (452)
T KOG0514|consen 316 QPAD-RTVVERLFKMG-DVNA---KASQHGQTALMLAVSHGRV----------DMVKALLACG-ADVNIQDDDGSTALMC 379 (452)
T ss_pred chhh-HHHHHHHHhcc-Ccch---hhhhhcchhhhhhhhcCcH----------HHHHHHHHcc-CCCccccCCccHHHhh
Confidence 1234 78899998887 6666 44 4799999999999999 9999999998 9999999999999999
Q ss_pred HHHcCCHHHHHHHH-hcCCccccccccCCCCchhhhhhcCCccccccc
Q 039483 230 AAYHRNYLILKLIL-KIDRTAAKIADKDRKMTALHLVHGPKGCQNNML 276 (360)
Q Consensus 230 A~~~~~~~~v~~Ll-~~g~~~~~~~d~~~g~tpLh~A~~~~~~~~~~L 276 (360)
||.+|+.+++++|| .-++|+ ...|. +|-|+|.+|-..|+.++-.|
T Consensus 380 A~EHGhkEivklLLA~p~cd~-sLtD~-DgSTAl~IAleagh~eIa~m 425 (452)
T KOG0514|consen 380 AAEHGHKEIVKLLLAVPSCDI-SLTDV-DGSTALSIALEAGHREIAVM 425 (452)
T ss_pred hhhhChHHHHHHHhccCcccc-eeecC-CCchhhhhHHhcCchHHHHH
Confidence 99999999999999 668888 99999 99999999999999983333
|
|
| >KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription] | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.1e-19 Score=140.98 Aligned_cols=138 Identities=21% Similarity=0.221 Sum_probs=124.5
Q ss_pred HHHHHhcCCcHHHHHHHHhhCCC-CCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCC
Q 039483 146 LCMAAEYEHSSHTVVAILKSCTS-VSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWW 224 (360)
Q Consensus 146 L~~A~~~g~~~~~~~~Ll~~g~~-~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~ 224 (360)
+.+|+..+. ...|+.||+..++ ++. +|..|.||||.|+.+|+. ++++.|+..+ ++.+.+-..||
T Consensus 67 ~lwaae~nr-l~eV~~lL~e~an~vNt---rD~D~YTpLHRAaYn~h~----------div~~ll~~g-An~~a~T~~GW 131 (228)
T KOG0512|consen 67 LLWAAEKNR-LTEVQRLLSEKANHVNT---RDEDEYTPLHRAAYNGHL----------DIVHELLLSG-ANKEAKTNEGW 131 (228)
T ss_pred HHHHHhhcc-HHHHHHHHHhccccccc---cccccccHHHHHHhcCch----------HHHHHHHHcc-CCcccccccCc
Confidence 567788888 9999999987654 677 999999999999999999 9999999999 88899999999
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc--cccccc---ccCccCCCCCCcHHHHHHHcC
Q 039483 225 TPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ--NNMLAS---SLMDEGDAKGNTTVHFFAAVH 299 (360)
Q Consensus 225 t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~--~~~L~~---~~~~~~d~~g~Tpl~~A~~~~ 299 (360)
||||.||++++.+++.+||++|+|+ +.... ...||||+|+...++- +++|+- .....++..+.||+++|.+.+
T Consensus 132 TPLhSAckWnN~~va~~LLqhgaDV-nA~t~-g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~ 209 (228)
T KOG0512|consen 132 TPLHSACKWNNFEVAGRLLQHGADV-NAQTK-GLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTS 209 (228)
T ss_pred cchhhhhcccchhHHHHHHhccCcc-ccccc-ccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhh
Confidence 9999999999999999999999999 99998 9999999999888776 777762 667778889999999999877
Q ss_pred C
Q 039483 300 R 300 (360)
Q Consensus 300 ~ 300 (360)
-
T Consensus 210 ~ 210 (228)
T KOG0512|consen 210 M 210 (228)
T ss_pred h
Confidence 4
|
|
| >PHA02741 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.1e-19 Score=148.10 Aligned_cols=124 Identities=14% Similarity=0.095 Sum_probs=98.2
Q ss_pred HHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHh------hCCCCCccccCCCCCCcHHHHHHhcCC----c
Q 039483 123 RQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILK------SCTSVSHIYMKAPMERQALHAATMHID----L 192 (360)
Q Consensus 123 ~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~------~g~~~~~~~~~d~~g~t~Lh~A~~~~~----~ 192 (360)
+.+++.+|..|. ||||+|+..|+ .++++.|+. .|++++. +|..|.||||+|+..|+ .
T Consensus 11 ~~~~~~~~~~g~---------t~Lh~Aa~~g~-~~~v~~l~~~~~~~~~ga~in~---~d~~g~T~Lh~A~~~g~~~~~~ 77 (169)
T PHA02741 11 EEMIAEKNSEGE---------NFFHEAARCGC-FDIIARFTPFIRGDCHAAALNA---TDDAGQMCIHIAAEKHEAQLAA 77 (169)
T ss_pred HHHhhccccCCC---------CHHHHHHHcCC-HHHHHHHHHHhccchhhhhhhc---cCCCCCcHHHHHHHcCChHHHH
Confidence 344556788875 88888899999 999999864 3577887 99999999999999998 5
Q ss_pred ccccccCChHHHHHHHHhcCccccccccC-CCChHHHHHHHcCCHHHHHHHHh-cCCccccccccCCCCchhhhhhcCCc
Q 039483 193 CKFNHTLSNDCAVQQLFEGKKSMIKGIDQ-CWWTPIHYAAYHRNYLILKLILK-IDRTAAKIADKDRKMTALHLVHGPKG 270 (360)
Q Consensus 193 ~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~-~g~t~Lh~A~~~~~~~~v~~Ll~-~g~~~~~~~d~~~g~tpLh~A~~~~~ 270 (360)
+++++|+..+ .+++.++. .|+||||+|+..++.+++++|++ .|+++ +.+|. .|+||||+|+..++
T Consensus 78 ----------~ii~~Ll~~g-adin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~-~~~n~-~g~tpL~~A~~~~~ 144 (169)
T PHA02741 78 ----------EIIDHLIELG-ADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDL-HFCNA-DNKSPFELAIDNED 144 (169)
T ss_pred ----------HHHHHHHHcC-CCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC-CcCCC-CCCCHHHHHHHCCC
Confidence 7889999988 77888885 89999999999999999999996 58887 66665 55555555544443
Q ss_pred cc
Q 039483 271 CQ 272 (360)
Q Consensus 271 ~~ 272 (360)
.+
T Consensus 145 ~~ 146 (169)
T PHA02741 145 VA 146 (169)
T ss_pred HH
Confidence 33
|
|
| >KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.78 E-value=9.2e-19 Score=162.83 Aligned_cols=189 Identities=19% Similarity=0.125 Sum_probs=155.1
Q ss_pred CCCCCCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHH
Q 039483 19 ETSQPQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIV 98 (360)
Q Consensus 19 ~~~~~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v 98 (360)
..-++-+.|+||.++...+.++|++|++. +..| +..|..|.|| ||.|+..||..++
T Consensus 67 ~~~n~DglTalhq~~id~~~e~v~~l~e~----------------------ga~V-n~~d~e~wtP-lhaaascg~~~i~ 122 (527)
T KOG0505|consen 67 NLCNVDGLTALHQACIDDNLEMVKFLVEN----------------------GANV-NAQDNEGWTP-LHAAASCGYLNIV 122 (527)
T ss_pred cccCCccchhHHHHHhcccHHHHHHHHHh----------------------cCCc-cccccccCCc-chhhcccccHHHH
Confidence 34456678999999999999999999984 7888 9999999999 9999999999999
Q ss_pred HHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhh---------------cCHHHHHHhcCCc---HHHHH
Q 039483 99 SVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYN---------------KIPLCMAAEYEHS---SHTVV 160 (360)
Q Consensus 99 ~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~---------------~t~L~~A~~~g~~---~~~~~ 160 (360)
++|+.+|+++.. .|.+|..|+..+.. .+ .-+++..-. ..=+.
T Consensus 123 ~~li~~gA~~~a------------------vNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~--iea~R~~~e~~ml~D~~ 182 (527)
T KOG0505|consen 123 EYLIQHGANLLA------------------VNSDGNMPYDLAEDEATLDVLETEMARQGID--IEAARKAEEQTMLDDAR 182 (527)
T ss_pred HHHHHhhhhhhh------------------ccCCCCCccccccCcchhHHHHHHHHHhccc--HHHHhhhhHHHHHHHHH
Confidence 999999999887 55555555554431 11 111111110 11233
Q ss_pred HHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHH
Q 039483 161 AILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILK 240 (360)
Q Consensus 161 ~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~ 240 (360)
..+..|..... ++..|.|.||+|+..|.. ++.++|+..+ .+++.+|.+||||||.|+.+|..++++
T Consensus 183 q~l~~G~~~d~---~~~rG~T~lHvAaa~Gy~----------e~~~lLl~ag-~~~~~~D~dgWtPlHAAA~Wg~~~~~e 248 (527)
T KOG0505|consen 183 QWLNAGAELDA---RHARGATALHVAAANGYT----------EVAALLLQAG-YSVNIKDYDGWTPLHAAAHWGQEDACE 248 (527)
T ss_pred HHHhccccccc---cccccchHHHHHHhhhHH----------HHHHHHHHhc-cCcccccccCCCcccHHHHhhhHhHHH
Confidence 34447877777 777799999999999999 9999999999 889999999999999999999999999
Q ss_pred HHHhcCCccccccccCCCCchhhhhhc
Q 039483 241 LILKIDRTAAKIADKDRKMTALHLVHG 267 (360)
Q Consensus 241 ~Ll~~g~~~~~~~d~~~g~tpLh~A~~ 267 (360)
+|+++|++. +.... .|.||+.+|..
T Consensus 249 lL~~~ga~~-d~~t~-~g~~p~dv~de 273 (527)
T KOG0505|consen 249 LLVEHGADM-DAKTK-MGETPLDVADE 273 (527)
T ss_pred HHHHhhccc-chhhh-cCCCCccchhh
Confidence 999999999 99999 99999998843
|
|
| >PHA02743 Viral ankyrin protein; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.9e-18 Score=143.05 Aligned_cols=138 Identities=12% Similarity=0.109 Sum_probs=115.9
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHH---HHHH
Q 039483 25 IDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDI---VSVL 101 (360)
Q Consensus 25 ~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~---v~~L 101 (360)
...+||.||+.|+++.++.+++. +... +..+ +.+|..|+|| ||+|+..|+.+. +++|
T Consensus 20 ~~~~l~~a~~~g~~~~l~~~~~~-l~~~-----------------g~~~-~~~d~~g~t~-Lh~Aa~~g~~~~~~~i~~L 79 (166)
T PHA02743 20 EQNTFLRICRTGNIYELMEVAPF-ISGD-----------------GHLL-HRYDHHGRQC-THMVAWYDRANAVMKIELL 79 (166)
T ss_pred CCcHHHHHHHcCCHHHHHHHHHH-Hhhc-----------------chhh-hccCCCCCcH-HHHHHHhCccCHHHHHHHH
Confidence 34679999999999877766552 1111 6667 8889999999 999999998654 8999
Q ss_pred HHhccccCcccccccccchhhHHHhhccc-CCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHh-hCCCCCccccCCCCC
Q 039483 102 IERAKLVQHEDEELESGVGASRQMIRMTN-KEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILK-SCTSVSHIYMKAPME 179 (360)
Q Consensus 102 l~~g~~~~~~~~~~~~~~~~~~~~l~~~d-~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~-~g~~~~~~~~~d~~g 179 (360)
+++|++++. ++ ..|. ||||+|+..|+ .+++++|+. .|++++. ++..|
T Consensus 80 l~~Gadin~------------------~d~~~g~---------TpLh~A~~~g~-~~iv~~Ll~~~gad~~~---~d~~g 128 (166)
T PHA02743 80 VNMGADINA------------------RELGTGN---------TLLHIAASTKN-YELAEWLCRQLGVNLGA---INYQH 128 (166)
T ss_pred HHcCCCCCC------------------CCCCCCC---------cHHHHHHHhCC-HHHHHHHHhccCCCccC---cCCCC
Confidence 999999988 66 4675 78888888999 999999995 7999999 99999
Q ss_pred CcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCC
Q 039483 180 RQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWW 224 (360)
Q Consensus 180 ~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~ 224 (360)
.||||+|+..++. +++++|+.++ ++++.++..|.
T Consensus 129 ~tpL~~A~~~~~~----------~iv~~Ll~~g-a~~~~~~~~~~ 162 (166)
T PHA02743 129 ETAYHIAYKMRDR----------RMMEILRANG-AVCDDPLSIGL 162 (166)
T ss_pred CCHHHHHHHcCCH----------HHHHHHHHcC-CCCCCcccCCc
Confidence 9999999999999 9999999998 77777776653
|
|
| >KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.9e-19 Score=174.02 Aligned_cols=206 Identities=16% Similarity=0.112 Sum_probs=160.7
Q ss_pred CCCCCCCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhh-h-----------
Q 039483 75 QPVTAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAY-N----------- 142 (360)
Q Consensus 75 ~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~-~----------- 142 (360)
..++-..+|| |.+|..-|..+++..|+..|..++.+ .-.+-|..||+.|. |
T Consensus 851 ehrnvsDytP-lsla~Sggy~~iI~~llS~GseInSr----------------tgSklgisPLmlatmngh~~at~~ll~ 913 (2131)
T KOG4369|consen 851 EHRNVSDYTP-LSLARSGGYTKIIHALLSSGSEINSR----------------TGSKLGISPLMLATMNGHQAATLSLLQ 913 (2131)
T ss_pred cccchhhcCc-hhhhcCcchHHHHHHHhhcccccccc----------------cccccCcchhhhhhhccccHHHHHHhc
Confidence 4444444444 44444444444444444444444432 12345777777776 3
Q ss_pred -------------cCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHH
Q 039483 143 -------------KIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLF 209 (360)
Q Consensus 143 -------------~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll 209 (360)
.|+|.+|+..|. .+++.+||...+.+.. +-+.|.|||.-++..|.. ++=..|+
T Consensus 914 ~gsdiNaqIeTNrnTaltla~fqgr-~evv~lLLa~~anveh---Raktgltplme~AsgGyv----------dvg~~li 979 (2131)
T KOG4369|consen 914 PGSDINAQIETNRNTALTLALFQGR-PEVVFLLLAAQANVEH---RAKTGLTPLMEMASGGYV----------DVGNLLI 979 (2131)
T ss_pred ccchhccccccccccceeeccccCc-chHHHHHHHHhhhhhh---hcccCCcccchhhcCCcc----------ccchhhh
Confidence 788999999999 9999999998888888 888999999999999999 8889999
Q ss_pred hcCccccccc--cCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-cccccc--ccCccC
Q 039483 210 EGKKSMIKGI--DQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLAS--SLMDEG 284 (360)
Q Consensus 210 ~~~~~~i~~~--d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~~--~~~~~~ 284 (360)
..+ ++.+.. -....|+|-.++..|+...+++|+...+.+ ..+++ +|+|+|.+|+..+... ...|+. ++.+..
T Consensus 980 ~~g-ad~nasPvp~T~dtalti~a~kGh~kfv~~lln~~atv-~v~Nk-kG~T~Lwla~~Gg~lss~~il~~~~ad~d~q 1056 (2131)
T KOG4369|consen 980 AAG-ADTNASPVPNTWDTALTIPANKGHTKFVPKLLNGDATV-RVPNK-KGCTVLWLASAGGALSSCPILVSSVADADQQ 1056 (2131)
T ss_pred hcc-cccccCCCCCcCCccceeecCCCchhhhHHhhCCccce-ecccC-CCCcccchhccCCccccchHHhhcccChhhh
Confidence 888 666643 234558888999999999999999988888 89999 9999999999888887 888885 999999
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHhhhhccc
Q 039483 285 DAKGNTTVHFFAAVHRKEIFDDLSGRVKAT 314 (360)
Q Consensus 285 d~~g~Tpl~~A~~~~~~~i~~~l~~~~~~~ 314 (360)
|+..+|+++.|.++|+.+||+.++...+.|
T Consensus 1057 dnr~~S~~maafRKgh~~iVk~mv~~atqf 1086 (2131)
T KOG4369|consen 1057 DNRTNSRTMAAFRKGHFAIVKKMVPPATQF 1086 (2131)
T ss_pred hcccccccHHHHHhchhheeccccCchhcC
Confidence 999999999999999999999888766544
|
|
| >PHA02736 Viral ankyrin protein; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.6e-18 Score=140.99 Aligned_cols=131 Identities=11% Similarity=0.070 Sum_probs=106.0
Q ss_pred CCCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCH---HHH
Q 039483 22 QPQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHC---DIV 98 (360)
Q Consensus 22 ~~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~---~~v 98 (360)
...+.+|||+|++.|++..+..+.....+.. +.++ ..+|.+|.|| ||+|+..|+. +++
T Consensus 14 d~~g~tpLh~A~~~g~~~~l~~~~~~~~~~~-----------------~~~~-~~~d~~g~t~-Lh~a~~~~~~~~~e~v 74 (154)
T PHA02736 14 DIEGENILHYLCRNGGVTDLLAFKNAISDEN-----------------RYLV-LEYNRHGKQC-VHIVSNPDKADPQEKL 74 (154)
T ss_pred CCCCCCHHHHHHHhCCHHHHHHHHHHhcchh-----------------HHHH-HHhcCCCCEE-EEeecccCchhHHHHH
Confidence 4567899999999998533322222111111 3445 6788999999 9999999986 468
Q ss_pred HHHHHhccccCcccccccccchhhHHHhhccc-CCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHh-hCCCCCccccCC
Q 039483 99 SVLIERAKLVQHEDEELESGVGASRQMIRMTN-KEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILK-SCTSVSHIYMKA 176 (360)
Q Consensus 99 ~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d-~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~-~g~~~~~~~~~d 176 (360)
++|++.|++++. ++ ..|. ||||+|+..|+ .+++++|+. .|++++. ++
T Consensus 75 ~~Ll~~gadin~------------------~~~~~g~---------T~Lh~A~~~~~-~~i~~~Ll~~~g~d~n~---~~ 123 (154)
T PHA02736 75 KLLMEWGADING------------------KERVFGN---------TPLHIAVYTQN-YELATWLCNQPGVNMEI---LN 123 (154)
T ss_pred HHHHHcCCCccc------------------cCCCCCC---------cHHHHHHHhCC-HHHHHHHHhCCCCCCcc---cc
Confidence 999999999988 66 4775 78888888999 999999998 4899999 99
Q ss_pred CCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcC
Q 039483 177 PMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGK 212 (360)
Q Consensus 177 ~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~ 212 (360)
..|.||||+|+..++. +++++|+..+
T Consensus 124 ~~g~tpL~~A~~~~~~----------~i~~~Ll~~g 149 (154)
T PHA02736 124 YAFKTPYYVACERHDA----------KMMNILRAKG 149 (154)
T ss_pred CCCCCHHHHHHHcCCH----------HHHHHHHHcC
Confidence 9999999999999999 9999999887
|
|
| >KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription] | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.6e-17 Score=133.26 Aligned_cols=145 Identities=17% Similarity=0.091 Sum_probs=120.4
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHhcc
Q 039483 27 PNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIERAK 106 (360)
Q Consensus 27 ~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~ 106 (360)
..+.+|+..|.+..|+.|++.. +..+ +.+|.+|+|| ||-|+.+||.+||+.|+..|+
T Consensus 65 rl~lwaae~nrl~eV~~lL~e~---------------------an~v-NtrD~D~YTp-LHRAaYn~h~div~~ll~~gA 121 (228)
T KOG0512|consen 65 RLLLWAAEKNRLTEVQRLLSEK---------------------ANHV-NTRDEDEYTP-LHRAAYNGHLDIVHELLLSGA 121 (228)
T ss_pred HHHHHHHhhccHHHHHHHHHhc---------------------cccc-cccccccccH-HHHHHhcCchHHHHHHHHccC
Confidence 3478899999999999998842 5567 9999999999 999999999999999999999
Q ss_pred ccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHH
Q 039483 107 LVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAA 186 (360)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A 186 (360)
+.+. +...|+ ||||-||...+ .+++.+||++|++++. ......||||.|
T Consensus 122 n~~a------------------~T~~GW---------TPLhSAckWnN-~~va~~LLqhgaDVnA---~t~g~ltpLhla 170 (228)
T KOG0512|consen 122 NKEA------------------KTNEGW---------TPLHSACKWNN-FEVAGRLLQHGADVNA---QTKGLLTPLHLA 170 (228)
T ss_pred Cccc------------------ccccCc---------cchhhhhcccc-hhHHHHHHhccCcccc---cccccchhhHHh
Confidence 9888 677775 77777777888 9999999999999999 888889999999
Q ss_pred HhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcC
Q 039483 187 TMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHR 234 (360)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~ 234 (360)
+...+.. ..+.+|+......+..++..+.||+.+|-+.+
T Consensus 171 a~~rn~r---------~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~ 209 (228)
T KOG0512|consen 171 AGNRNSR---------DTLELLLHDRYIHPGLKNNLEETAFDIARRTS 209 (228)
T ss_pred hcccchH---------HHHHHHhhccccChhhhcCccchHHHHHHHhh
Confidence 9887761 45666665544566777888899999887764
|
|
| >KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.72 E-value=9.7e-18 Score=166.02 Aligned_cols=242 Identities=19% Similarity=0.179 Sum_probs=194.7
Q ss_pred CCCCCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHH
Q 039483 20 TSQPQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVS 99 (360)
Q Consensus 20 ~~~~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~ 99 (360)
.+.++.+++|-.|+..|+.|.++.|+.+ +..+ ..+|++|.+| |.+|+..||..+|+
T Consensus 752 ~Te~n~~t~LT~acaggh~e~vellv~r----------------------gani-ehrdkkgf~p-lImaatagh~tvV~ 807 (2131)
T KOG4369|consen 752 LTEPNIKTNLTSACAGGHREEVELLVVR----------------------GANI-EHRDKKGFVP-LIMAATAGHITVVQ 807 (2131)
T ss_pred ccCccccccccccccCccHHHHHHHHHh----------------------cccc-cccccccchh-hhhhcccCchHHHH
Confidence 3457788999999999999999999884 5666 8889999999 99999999999999
Q ss_pred HHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhh------------------------cCHHHHHHhcCCc
Q 039483 100 VLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYN------------------------KIPLCMAAEYEHS 155 (360)
Q Consensus 100 ~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~------------------------~t~L~~A~~~g~~ 155 (360)
.|+.+.++++. ..|..+.|+|..|+. +|||.+|...|.
T Consensus 808 ~llk~ha~vea-----------------Qsdrtkdt~lSlacsggr~~vvelLl~~gankehrnvsDytPlsla~Sggy- 869 (2131)
T KOG4369|consen 808 DLLKAHADVEA-----------------QSDRTKDTMLSLACSGGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGY- 869 (2131)
T ss_pred HHHhhhhhhhh-----------------hcccccCceEEEecCCCcchHHHHHHHhhccccccchhhcCchhhhcCcch-
Confidence 99998888877 366667766666551 789999988888
Q ss_pred HHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccc-cCCCChHHHHHHHcC
Q 039483 156 SHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGI-DQCWWTPIHYAAYHR 234 (360)
Q Consensus 156 ~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~-d~~g~t~Lh~A~~~~ 234 (360)
.++++.|+.+|..++.-. -.+.|..||..|..+|+. ...+.|++.+ .++|.. ..+.+|+|-+|+-.|
T Consensus 870 ~~iI~~llS~GseInSrt-gSklgisPLmlatmngh~----------~at~~ll~~g-sdiNaqIeTNrnTaltla~fqg 937 (2131)
T KOG4369|consen 870 TKIIHALLSSGSEINSRT-GSKLGISPLMLATMNGHQ----------AATLSLLQPG-SDINAQIETNRNTALTLALFQG 937 (2131)
T ss_pred HHHHHHHhhccccccccc-ccccCcchhhhhhhcccc----------HHHHHHhccc-chhccccccccccceeeccccC
Confidence 999999999998877611 334788999999999999 8888888888 667754 456778899999999
Q ss_pred CHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-ccccc--cccCccC--CCCCCcHHHHHHHcCCHHHHHHHhh
Q 039483 235 NYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLA--SSLMDEG--DAKGNTTVHFFAAVHRKEIFDDLSG 309 (360)
Q Consensus 235 ~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~--~~~~~~~--d~~g~Tpl~~A~~~~~~~i~~~l~~ 309 (360)
+.+++.+||.+.+++ ..+.+ .|.|||+-++..|..+ -++|+ +++.|.. -....|+|.+++..||..-+..|+.
T Consensus 938 r~evv~lLLa~~anv-ehRak-tgltplme~AsgGyvdvg~~li~~gad~nasPvp~T~dtalti~a~kGh~kfv~~lln 1015 (2131)
T KOG4369|consen 938 RPEVVFLLLAAQANV-EHRAK-TGLTPLMEMASGGYVDVGNLLIAAGADTNASPVPNTWDTALTIPANKGHTKFVPKLLN 1015 (2131)
T ss_pred cchHHHHHHHHhhhh-hhhcc-cCCcccchhhcCCccccchhhhhcccccccCCCCCcCCccceeecCCCchhhhHHhhC
Confidence 999999999888888 88888 8999999988888888 66666 4666543 3456788999999999888887777
Q ss_pred hhccccCC
Q 039483 310 RVKATMRP 317 (360)
Q Consensus 310 ~~~~~~~p 317 (360)
......+|
T Consensus 1016 ~~atv~v~ 1023 (2131)
T KOG4369|consen 1016 GDATVRVP 1023 (2131)
T ss_pred Cccceecc
Confidence 65333333
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.68 E-value=8.1e-17 Score=139.09 Aligned_cols=115 Identities=23% Similarity=0.282 Sum_probs=107.6
Q ss_pred HhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHH
Q 039483 125 MIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCA 204 (360)
Q Consensus 125 ~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~ 204 (360)
.+|.-|..| ++|||+||..|+ ..+++.|+..|+.++. .+....||||.|+..|+. ++
T Consensus 26 dln~gddhg---------fsplhwaakegh-~aivemll~rgarvn~---tnmgddtplhlaaahghr----------di 82 (448)
T KOG0195|consen 26 DLNVGDDHG---------FSPLHWAAKEGH-VAIVEMLLSRGARVNS---TNMGDDTPLHLAAAHGHR----------DI 82 (448)
T ss_pred ccccccccC---------cchhhhhhhccc-HHHHHHHHhccccccc---ccCCCCcchhhhhhcccH----------HH
Confidence 344567777 489999999999 9999999999999999 888889999999999999 99
Q ss_pred HHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhh
Q 039483 205 VQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLV 265 (360)
Q Consensus 205 ~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A 265 (360)
++.|+++. +++|..+..|+||||+||.+|..++.+-|+..|+-+ ++.++ +|.|||..|
T Consensus 83 vqkll~~k-advnavnehgntplhyacfwgydqiaedli~~ga~v-~icnk-~g~tpldka 140 (448)
T KOG0195|consen 83 VQKLLSRK-ADVNAVNEHGNTPLHYACFWGYDQIAEDLISCGAAV-NICNK-KGMTPLDKA 140 (448)
T ss_pred HHHHHHHh-cccchhhccCCCchhhhhhhcHHHHHHHHHhcccee-eeccc-CCCCchhhh
Confidence 99999998 999999999999999999999999999999999999 99999 999999987
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.6e-16 Score=137.22 Aligned_cols=122 Identities=23% Similarity=0.214 Sum_probs=110.8
Q ss_pred ccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcC
Q 039483 65 TSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKI 144 (360)
Q Consensus 65 l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t 144 (360)
|.+. ..++ +.-|..|.+| ||+||+.||..+|+.|+.+|+.+|. .|... .|
T Consensus 20 ld~t-ehdl-n~gddhgfsp-lhwaakegh~aivemll~rgarvn~------------------tnmgd---------dt 69 (448)
T KOG0195|consen 20 LDDT-EHDL-NVGDDHGFSP-LHWAAKEGHVAIVEMLLSRGARVNS------------------TNMGD---------DT 69 (448)
T ss_pred ecCc-cccc-ccccccCcch-hhhhhhcccHHHHHHHHhccccccc------------------ccCCC---------Cc
Confidence 4444 7788 8899999999 9999999999999999999999887 44443 48
Q ss_pred HHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCC
Q 039483 145 PLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWW 224 (360)
Q Consensus 145 ~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~ 224 (360)
|||+|+.+|+ .++|+.|++..++++. .+..|+|||||||.-|.. ++++-|+..+ +.++..+++|.
T Consensus 70 plhlaaahgh-rdivqkll~~kadvna---vnehgntplhyacfwgyd----------qiaedli~~g-a~v~icnk~g~ 134 (448)
T KOG0195|consen 70 PLHLAAAHGH-RDIVQKLLSRKADVNA---VNEHGNTPLHYACFWGYD----------QIAEDLISCG-AAVNICNKKGM 134 (448)
T ss_pred chhhhhhccc-HHHHHHHHHHhcccch---hhccCCCchhhhhhhcHH----------HHHHHHHhcc-ceeeecccCCC
Confidence 9999999999 9999999999999999 999999999999999999 9999999999 77999999999
Q ss_pred hHHHHHH
Q 039483 225 TPIHYAA 231 (360)
Q Consensus 225 t~Lh~A~ 231 (360)
|||.-|-
T Consensus 135 tpldkak 141 (448)
T KOG0195|consen 135 TPLDKAK 141 (448)
T ss_pred Cchhhhc
Confidence 9998763
|
|
| >cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.4e-15 Score=120.21 Aligned_cols=125 Identities=26% Similarity=0.347 Sum_probs=109.4
Q ss_pred CCCCCCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCc
Q 039483 76 PVTAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHS 155 (360)
Q Consensus 76 ~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~ 155 (360)
.+|.+|.|| ||+|+..|+.+++++|++.|.+.+. .+..|. +|||.|+..++
T Consensus 2 ~~~~~g~t~-l~~a~~~~~~~~i~~li~~~~~~~~------------------~~~~g~---------~~l~~a~~~~~- 52 (126)
T cd00204 2 ARDEDGRTP-LHLAASNGHLEVVKLLLENGADVNA------------------KDNDGR---------TPLHLAAKNGH- 52 (126)
T ss_pred CcCcCCCCH-HHHHHHcCcHHHHHHHHHcCCCCCc------------------cCCCCC---------cHHHHHHHcCC-
Confidence 356789999 9999999999999999999987655 677774 77788888888
Q ss_pred HHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCC
Q 039483 156 SHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRN 235 (360)
Q Consensus 156 ~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~ 235 (360)
.+++++|++.|+.++. .+..|.||+|+|+..++. +++++|+..+ ..++..+..+.||+++|...++
T Consensus 53 ~~~~~~ll~~~~~~~~---~~~~~~~~l~~a~~~~~~----------~~~~~L~~~~-~~~~~~~~~~~~~l~~~~~~~~ 118 (126)
T cd00204 53 LEIVKLLLEKGADVNA---RDKDGNTPLHLAARNGNL----------DVVKLLLKHG-ADVNARDKDGRTPLHLAAKNGH 118 (126)
T ss_pred HHHHHHHHHcCCCccc---cCCCCCCHHHHHHHcCcH----------HHHHHHHHcC-CCCcccCCCCCCHHHHHHhcCC
Confidence 9999999999988877 888899999999999999 9999999987 6677888999999999999999
Q ss_pred HHHHHHHH
Q 039483 236 YLILKLIL 243 (360)
Q Consensus 236 ~~~v~~Ll 243 (360)
.+++++|+
T Consensus 119 ~~~~~~Ll 126 (126)
T cd00204 119 LEVVKLLL 126 (126)
T ss_pred HHHHHHhC
Confidence 99998874
|
The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. |
| >PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.1e-15 Score=114.36 Aligned_cols=89 Identities=28% Similarity=0.313 Sum_probs=80.0
Q ss_pred HHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCCh
Q 039483 146 LCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWT 225 (360)
Q Consensus 146 L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t 225 (360)
||+|++.|+ .+++++|++.+.+++. |+||||+|+..|+. +++++|++.+ .+++.+|..|+|
T Consensus 1 L~~A~~~~~-~~~~~~ll~~~~~~~~-------~~~~l~~A~~~~~~----------~~~~~Ll~~g-~~~~~~~~~g~t 61 (89)
T PF12796_consen 1 LHIAAQNGN-LEILKFLLEKGADINL-------GNTALHYAAENGNL----------EIVKLLLENG-ADINSQDKNGNT 61 (89)
T ss_dssp HHHHHHTTT-HHHHHHHHHTTSTTTS-------SSBHHHHHHHTTTH----------HHHHHHHHTT-TCTT-BSTTSSB
T ss_pred CHHHHHcCC-HHHHHHHHHCcCCCCC-------CCCHHHHHHHcCCH----------HHHHHHHHhc-ccccccCCCCCC
Confidence 799999999 9999999998865543 88999999999999 9999999999 789999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCccccccc
Q 039483 226 PIHYAAYHRNYLILKLILKIDRTAAKIAD 254 (360)
Q Consensus 226 ~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d 254 (360)
|||+|+.+|+.+++++|+++|+++ +.+|
T Consensus 62 ~L~~A~~~~~~~~~~~Ll~~g~~~-~~~n 89 (89)
T PF12796_consen 62 ALHYAAENGNLEIVKLLLEHGADV-NIRN 89 (89)
T ss_dssp HHHHHHHTTHHHHHHHHHHTTT-T-TSS-
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCC-CCcC
Confidence 999999999999999999999998 7654
|
These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B .... |
| >KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.3e-15 Score=148.54 Aligned_cols=220 Identities=19% Similarity=0.178 Sum_probs=156.0
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhc---CCHHHHHHHHH
Q 039483 27 PNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKF---DHCDIVSVLIE 103 (360)
Q Consensus 27 ~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~---g~~~~v~~Ll~ 103 (360)
.+++.|..+|+.+.+..+....-... .+. . .+.+ +.+...|+|+ ||.|..+ ++.++++.|++
T Consensus 103 ~~~~~~~~~~~l~~l~~l~~~~~~~k---~r~---------~-~w~~-~~RGa~GET~-Lh~~lL~~~~~~n~la~~LL~ 167 (782)
T KOG3676|consen 103 DALFIADSEGALSDLDGLLKFLRKSK---YRL---------T-DWKL-NERGATGETL-LHKALLNLSDGHNELARVLLE 167 (782)
T ss_pred hhhhhccccccHHHHhccchhhhhhh---hhh---------h-hhcc-ccccchhhhH-HHHHHhcCchhHHHHHHHHHH
Confidence 66888889998888887776221110 000 0 4567 7788899999 9999874 45689999997
Q ss_pred hccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHH
Q 039483 104 RAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQAL 183 (360)
Q Consensus 104 ~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~L 183 (360)
.-...-. ...-.....|+ ||||+|+.+.+ .++|.+|+..|+++++ +.. |. .
T Consensus 168 ~~p~lin-------------d~~~~eeY~Gq---------SaLHiAIv~~~-~~~V~lLl~~gADV~a---Ra~-G~--F 218 (782)
T KOG3676|consen 168 IFPKLIN-------------DIYTSEEYYGQ---------SALHIAIVNRD-AELVRLLLAAGADVHA---RAC-GA--F 218 (782)
T ss_pred HhHHHhh-------------hhhhhHhhcCc---------chHHHHHHhcc-HHHHHHHHHcCCchhh---Hhh-cc--c
Confidence 6532110 00001233464 88888888889 9999999999999987 321 11 0
Q ss_pred HHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhh
Q 039483 184 HAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALH 263 (360)
Q Consensus 184 h~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh 263 (360)
.. ..+. ...+ ...+-...-..|..||.+||..++++++++|+++|+|+ +.+|. .|+|.||
T Consensus 219 F~---~~dq----------k~~r-----k~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~-~aqDS-~GNTVLH 278 (782)
T KOG3676|consen 219 FC---PDDQ----------KASR-----KSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADP-NAQDS-NGNTVLH 278 (782)
T ss_pred cC---cccc----------cccc-----cccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCC-Ccccc-CCChHHH
Confidence 00 0000 0000 00111112346889999999999999999999999999 99999 9999999
Q ss_pred hhhcCCccc-cccccc--cc--CccCCCCCCcHHHHHHHcCCHHHHHHHhhh
Q 039483 264 LVHGPKGCQ-NNMLAS--SL--MDEGDAKGNTTVHFFAAVHRKEIFDDLSGR 310 (360)
Q Consensus 264 ~A~~~~~~~-~~~L~~--~~--~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~ 310 (360)
..+.....+ .+++++ ++ ...+|+.|.|||.+|++-|+.++.+.++++
T Consensus 279 ~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 279 MLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILER 330 (782)
T ss_pred HHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence 998886666 666663 55 778999999999999999999999999987
|
|
| >KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.60 E-value=1e-14 Score=142.36 Aligned_cols=184 Identities=16% Similarity=0.098 Sum_probs=139.1
Q ss_pred CCCCCHHHHHHHHc---CChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHH
Q 039483 22 QPQIDPNLFKVAAA---GNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIV 98 (360)
Q Consensus 22 ~~~~~~~L~~Aa~~---G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v 98 (360)
...++|.||.|+-+ |.-++++.|++.-+... .+++..-.-.|.|| ||+|+.+.+.++|
T Consensus 140 Ga~GET~Lh~~lL~~~~~~n~la~~LL~~~p~li------------------nd~~~~eeY~GqSa-LHiAIv~~~~~~V 200 (782)
T KOG3676|consen 140 GATGETLLHKALLNLSDGHNELARVLLEIFPKLI------------------NDIYTSEEYYGQSA-LHIAIVNRDAELV 200 (782)
T ss_pred cchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHh------------------hhhhhhHhhcCcch-HHHHHHhccHHHH
Confidence 56788999999873 34477888887433221 11112233569999 9999999999999
Q ss_pred HHHHHhccccCccccccc-ccchhhHHHhhcccCCCCchHHHhh-hcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCC
Q 039483 99 SVLIERAKLVQHEDEELE-SGVGASRQMIRMTNKEKHTTLHEAY-NKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKA 176 (360)
Q Consensus 99 ~~Ll~~g~~~~~~~~~~~-~~~~~~~~~l~~~d~~g~t~Lh~a~-~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d 176 (360)
++|++.|||++.+-...- .+.+ -|..-...|..| ++. .+.||-.||+.++ .+++++|+++|++++. +|
T Consensus 201 ~lLl~~gADV~aRa~G~FF~~~d-qk~~rk~T~Y~G-----~~YfGEyPLSfAAC~nq-~eivrlLl~~gAd~~a---qD 270 (782)
T KOG3676|consen 201 RLLLAAGADVHARACGAFFCPDD-QKASRKSTNYTG-----YFYFGEYPLSFAACTNQ-PEIVRLLLAHGADPNA---QD 270 (782)
T ss_pred HHHHHcCCchhhHhhccccCccc-ccccccccCCcc-----eeeeccCchHHHHHcCC-HHHHHHHHhcCCCCCc---cc
Confidence 999999999987310000 0000 000001122222 111 3789999999999 9999999999999999 99
Q ss_pred CCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccc--cccccCCCChHHHHHHHcCCHHHHHHHHhc
Q 039483 177 PMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSM--IKGIDQCWWTPIHYAAYHRNYLILKLILKI 245 (360)
Q Consensus 177 ~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~--i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ 245 (360)
.+|+|+||..+..-.. ++.+++++.+ +. ...+|.+|-|||-+|++-|+.++.+.+++.
T Consensus 271 S~GNTVLH~lVi~~~~----------~My~~~L~~g-a~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 271 SNGNTVLHMLVIHFVT----------EMYDLALELG-ANALEHVRNNQGLTPLTLAAKLGKKEMFQHILER 330 (782)
T ss_pred cCCChHHHHHHHHHHH----------HHHHHHHhcC-CCccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence 9999999999998888 9999999998 55 778899999999999999999999999987
|
|
| >PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain | Back alignment and domain information |
|---|
Probab=99.59 E-value=7.8e-15 Score=109.73 Aligned_cols=89 Identities=22% Similarity=0.245 Sum_probs=78.3
Q ss_pred HHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhh
Q 039483 86 RHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKS 165 (360)
Q Consensus 86 Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~ 165 (360)
||+||+.|+.+++++|++.+.+++. | .||||+|+..|+ .+++++|++.
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~----------------------~---------~~~l~~A~~~~~-~~~~~~Ll~~ 48 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL----------------------G---------NTALHYAAENGN-LEIVKLLLEN 48 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS----------------------S---------SBHHHHHHHTTT-HHHHHHHHHT
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC----------------------C---------CCHHHHHHHcCC-HHHHHHHHHh
Confidence 7999999999999999998866542 3 388999999999 9999999999
Q ss_pred CCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCcccccccc
Q 039483 166 CTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGID 220 (360)
Q Consensus 166 g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d 220 (360)
|++++. +|..|+||||+|+..|+. +++++|++++ .+++.+|
T Consensus 49 g~~~~~---~~~~g~t~L~~A~~~~~~----------~~~~~Ll~~g-~~~~~~n 89 (89)
T PF12796_consen 49 GADINS---QDKNGNTALHYAAENGNL----------EIVKLLLEHG-ADVNIRN 89 (89)
T ss_dssp TTCTT----BSTTSSBHHHHHHHTTHH----------HHHHHHHHTT-T-TTSS-
T ss_pred cccccc---cCCCCCCHHHHHHHcCCH----------HHHHHHHHcC-CCCCCcC
Confidence 999999 999999999999999999 9999999998 7676654
|
These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B .... |
| >cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.5e-14 Score=114.26 Aligned_cols=113 Identities=30% Similarity=0.322 Sum_probs=91.5
Q ss_pred cCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCC
Q 039483 143 KIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQC 222 (360)
Q Consensus 143 ~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~ 222 (360)
.||||.|+..++ .+++++|++.|...+. .+..|.+|+|+|+..++. +++++|+..+ ..++..+..
T Consensus 8 ~t~l~~a~~~~~-~~~i~~li~~~~~~~~---~~~~g~~~l~~a~~~~~~----------~~~~~ll~~~-~~~~~~~~~ 72 (126)
T cd00204 8 RTPLHLAASNGH-LEVVKLLLENGADVNA---KDNDGRTPLHLAAKNGHL----------EIVKLLLEKG-ADVNARDKD 72 (126)
T ss_pred CCHHHHHHHcCc-HHHHHHHHHcCCCCCc---cCCCCCcHHHHHHHcCCH----------HHHHHHHHcC-CCccccCCC
Confidence 377777788888 8899999988887766 788888999999998888 8999998887 567777888
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc
Q 039483 223 WWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ 272 (360)
Q Consensus 223 g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~ 272 (360)
|.||+|+|+..++.+++++|++.+.++ +..+. .|.||+++|...++.+
T Consensus 73 ~~~~l~~a~~~~~~~~~~~L~~~~~~~-~~~~~-~~~~~l~~~~~~~~~~ 120 (126)
T cd00204 73 GNTPLHLAARNGNLDVVKLLLKHGADV-NARDK-DGRTPLHLAAKNGHLE 120 (126)
T ss_pred CCCHHHHHHHcCcHHHHHHHHHcCCCC-cccCC-CCCCHHHHHHhcCCHH
Confidence 889999999999899999998888777 66666 7777777776654444
|
The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. |
| >KOG4214 consensus Myotrophin and similar proteins [Transcription] | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.9e-13 Score=98.43 Aligned_cols=104 Identities=21% Similarity=0.234 Sum_probs=88.5
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHhcc
Q 039483 27 PNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIERAK 106 (360)
Q Consensus 27 ~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~ 106 (360)
..+.+++++|.+|.|+..+....+. +.. -.|++| ||+|+-+|..+++++|+..|+
T Consensus 4 ~~~~W~vkNG~~DeVk~~v~~g~nV-----------------------n~~-~ggR~p-lhyAAD~GQl~ilefli~iGA 58 (117)
T KOG4214|consen 4 MSVAWNVKNGEIDEVKQSVNEGLNV-----------------------NEI-YGGRTP-LHYAADYGQLSILEFLISIGA 58 (117)
T ss_pred hhHhhhhccCcHHHHHHHHHccccH-----------------------HHH-hCCccc-chHhhhcchHHHHHHHHHhcc
Confidence 4578999999999999987753332 222 268999 999999999999999999999
Q ss_pred ccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHH
Q 039483 107 LVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAA 186 (360)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A 186 (360)
+++. +|++|. |||..|+..|| .+||++|++.|++-.. +.+.|.+.+..+
T Consensus 59 ~i~~------------------kDKygI---------TPLLsAvwEGH-~~cVklLL~~GAdrt~---~~PdG~~~~eat 107 (117)
T KOG4214|consen 59 NIQD------------------KDKYGI---------TPLLSAVWEGH-RDCVKLLLQNGADRTI---HAPDGTALIEAT 107 (117)
T ss_pred ccCC------------------ccccCC---------cHHHHHHHHhh-HHHHHHHHHcCcccce---eCCCchhHHhhc
Confidence 9998 899985 88888899999 9999999999999888 888998776544
|
|
| >KOG4214 consensus Myotrophin and similar proteins [Transcription] | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.2e-13 Score=98.16 Aligned_cols=102 Identities=17% Similarity=0.110 Sum_probs=92.5
Q ss_pred HHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCCh
Q 039483 146 LCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWT 225 (360)
Q Consensus 146 L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t 225 (360)
+.++..+|. .+-|+..+..|-+++. .- .|++|||+|+..|+. +++++|+..+ ++++.+|++|.|
T Consensus 6 ~~W~vkNG~-~DeVk~~v~~g~nVn~---~~-ggR~plhyAAD~GQl----------~ilefli~iG-A~i~~kDKygIT 69 (117)
T KOG4214|consen 6 VAWNVKNGE-IDEVKQSVNEGLNVNE---IY-GGRTPLHYAADYGQL----------SILEFLISIG-ANIQDKDKYGIT 69 (117)
T ss_pred HhhhhccCc-HHHHHHHHHccccHHH---Hh-CCcccchHhhhcchH----------HHHHHHHHhc-cccCCccccCCc
Confidence 567788999 9999999999988876 33 899999999999999 9999999999 889999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhh
Q 039483 226 PIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLV 265 (360)
Q Consensus 226 ~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A 265 (360)
||..|+..|+..+|++||+.|++- ..+.. +|.+.+..+
T Consensus 70 PLLsAvwEGH~~cVklLL~~GAdr-t~~~P-dG~~~~eat 107 (117)
T KOG4214|consen 70 PLLSAVWEGHRDCVKLLLQNGADR-TIHAP-DGTALIEAT 107 (117)
T ss_pred HHHHHHHHhhHHHHHHHHHcCccc-ceeCC-CchhHHhhc
Confidence 999999999999999999999998 88888 887776544
|
|
| >COG0666 Arp FOG: Ankyrin repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.46 E-value=7.1e-13 Score=115.80 Aligned_cols=133 Identities=21% Similarity=0.167 Sum_probs=115.9
Q ss_pred CCCCCCCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhh-hcCHHHHHHhcC
Q 039483 75 QPVTAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAY-NKIPLCMAAEYE 153 (360)
Q Consensus 75 ~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~-~~t~L~~A~~~g 153 (360)
...+..+.++ +|.|+..+..+++++++..|++++. +|..|.||||.|+ +..+ ..+
T Consensus 67 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~------------------~~~~g~t~l~~a~~~~~~-----~~~ 122 (235)
T COG0666 67 AARDLDGRLP-LHSAASKGDDKIVKLLLASGADVNA------------------KDADGDTPLHLAALNGNP-----PEG 122 (235)
T ss_pred ccCCccccCH-HHHHHHcCcHHHHHHHHHcCCCccc------------------ccCCCCcHHHHHHhcCCc-----ccc
Confidence 4455668899 9999999999999999999999977 8999987776666 2222 445
Q ss_pred CcHHHHHHHHhhCC---CCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHH
Q 039483 154 HSSHTVVAILKSCT---SVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYA 230 (360)
Q Consensus 154 ~~~~~~~~Ll~~g~---~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A 230 (360)
+ .+++++|++.|+ ..+. ++..|.||||+|+..|+. ++++.|++.+ .+++..+..|.|++++|
T Consensus 123 ~-~~~~~~ll~~g~~~~~~~~---~~~~g~tpl~~A~~~~~~----------~~~~~ll~~~-~~~~~~~~~g~t~l~~a 187 (235)
T COG0666 123 N-IEVAKLLLEAGADLDVNNL---RDEDGNTPLHWAALNGDA----------DIVELLLEAG-ADPNSRNSYGVTALDPA 187 (235)
T ss_pred h-HHHHHHHHHcCCCCCCccc---cCCCCCchhHHHHHcCch----------HHHHHHHhcC-CCCcccccCCCcchhhh
Confidence 5 899999999999 4444 799999999999999999 9999999998 77889999999999999
Q ss_pred HHcCCHHHHHHHHhcC
Q 039483 231 AYHRNYLILKLILKID 246 (360)
Q Consensus 231 ~~~~~~~~v~~Ll~~g 246 (360)
+..++..+++.+++.+
T Consensus 188 ~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 188 AKNGRIELVKLLLDKG 203 (235)
T ss_pred cccchHHHHHHHHhcC
Confidence 9999999999999865
|
|
| >PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A | Back alignment and domain information |
|---|
Probab=99.38 E-value=4e-13 Score=90.97 Aligned_cols=56 Identities=27% Similarity=0.355 Sum_probs=34.1
Q ss_pred HHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhh
Q 039483 208 LFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLV 265 (360)
Q Consensus 208 Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A 265 (360)
|++.++.+++..|..|.||||+|+.+|+.+++++|++.|+++ +.+|. .|+||||+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~-~~~d~-~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADP-NAKDK-DGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--T-T---T-TS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCC-CCCcC-CCCCHHHhC
Confidence 455666889999999999999999999999999999999999 99999 999999987
|
|
| >COG0666 Arp FOG: Ankyrin repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.7e-12 Score=112.05 Aligned_cols=119 Identities=23% Similarity=0.248 Sum_probs=106.9
Q ss_pred cCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCC-----cccccccCChHHHHHHHHhcCc--cc
Q 039483 143 KIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHID-----LCKFNHTLSNDCAVQQLFEGKK--SM 215 (360)
Q Consensus 143 ~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~-----~~~~~~~~~~~~~~~~Ll~~~~--~~ 215 (360)
.++++.++..+. .+++++++..|.+++. ++..|.||||+|+..++ . ++++.|++.+. ..
T Consensus 74 ~~~~~~~~~~~~-~~~~~~l~~~~~~~~~---~~~~g~t~l~~a~~~~~~~~~~~----------~~~~~ll~~g~~~~~ 139 (235)
T COG0666 74 RLPLHSAASKGD-DKIVKLLLASGADVNA---KDADGDTPLHLAALNGNPPEGNI----------EVAKLLLEAGADLDV 139 (235)
T ss_pred cCHHHHHHHcCc-HHHHHHHHHcCCCccc---ccCCCCcHHHHHHhcCCcccchH----------HHHHHHHHcCCCCCC
Confidence 488899999999 9999999999999988 99999999999999999 8 99999999995 47
Q ss_pred cccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-ccccc
Q 039483 216 IKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLA 277 (360)
Q Consensus 216 i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~ 277 (360)
.+..|..|+||||+|+..|+.+++++|++.|+++ +.++. .|.|+++.|+..+..+ ...++
T Consensus 140 ~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~-~~~~~-~g~t~l~~a~~~~~~~~~~~l~ 200 (235)
T COG0666 140 NNLRDEDGNTPLHWAALNGDADIVELLLEAGADP-NSRNS-YGVTALDPAAKNGRIELVKLLL 200 (235)
T ss_pred ccccCCCCCchhHHHHHcCchHHHHHHHhcCCCC-ccccc-CCCcchhhhcccchHHHHHHHH
Confidence 7777999999999999999999999999999999 88888 8888888888877776 44443
|
|
| >KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.34 E-value=9.2e-12 Score=107.97 Aligned_cols=124 Identities=15% Similarity=0.097 Sum_probs=109.5
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHh
Q 039483 25 IDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIER 104 (360)
Q Consensus 25 ~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~ 104 (360)
...||+.++..|+.+....|++. . ..+ +.+|..|.|| |.-|+..|+.++|+.|++.
T Consensus 12 ~~~~Lle~i~Kndt~~a~~LLs~-v---------------------r~v-n~~D~sGMs~-LahAaykGnl~~v~lll~~ 67 (396)
T KOG1710|consen 12 PKSPLLEAIDKNDTEAALALLST-V---------------------RQV-NQRDPSGMSV-LAHAAYKGNLTLVELLLEL 67 (396)
T ss_pred hhhHHHHHHccCcHHHHHHHHHH-h---------------------hhh-hccCCCcccH-HHHHHhcCcHHHHHHHHHh
Confidence 34789999999999999999983 1 124 7799999999 9999999999999999999
Q ss_pred ccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHH
Q 039483 105 AKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALH 184 (360)
Q Consensus 105 g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh 184 (360)
|+|+|.. ++..+ +||||.|+.+|+ .++...|++.|+.+.. .+.-|+|+-.
T Consensus 68 gaDvN~~-----------------qhg~~---------YTpLmFAALSGn-~dvcrllldaGa~~~~---vNsvgrTAaq 117 (396)
T KOG1710|consen 68 GADVNDK-----------------QHGTL---------YTPLMFAALSGN-QDVCRLLLDAGARMYL---VNSVGRTAAQ 117 (396)
T ss_pred CCCcCcc-----------------ccccc---------ccHHHHHHHcCC-chHHHHHHhccCcccc---ccchhhhHHH
Confidence 9999972 55554 599999999999 9999999999999988 8999999999
Q ss_pred HHHhcCCcccccccCChHHHHHHHHhcC
Q 039483 185 AATMHIDLCKFNHTLSNDCAVQQLFEGK 212 (360)
Q Consensus 185 ~A~~~~~~~~~~~~~~~~~~~~~Ll~~~ 212 (360)
.|+..|+. ++|..+..+-
T Consensus 118 mAAFVG~H----------~CV~iINN~~ 135 (396)
T KOG1710|consen 118 MAAFVGHH----------ECVAIINNHI 135 (396)
T ss_pred HHHHhcch----------HHHHHHhccc
Confidence 99999999 8888877654
|
|
| >PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=8e-12 Score=126.51 Aligned_cols=105 Identities=17% Similarity=0.079 Sum_probs=98.1
Q ss_pred CHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCC
Q 039483 144 IPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCW 223 (360)
Q Consensus 144 t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g 223 (360)
+.|+.|+..|+ .++++.|+..|++++. +|..|.||||+|+..|+. +++++|++.+ ++++.+|..|
T Consensus 84 ~~L~~aa~~G~-~~~vk~LL~~Gadin~---~d~~G~TpLh~Aa~~g~~----------eiv~~LL~~G-advn~~d~~G 148 (664)
T PTZ00322 84 VELCQLAASGD-AVGARILLTGGADPNC---RDYDGRTPLHIACANGHV----------QVVRVLLEFG-ADPTLLDKDG 148 (664)
T ss_pred HHHHHHHHcCC-HHHHHHHHHCCCCCCC---cCCCCCcHHHHHHHCCCH----------HHHHHHHHCC-CCCCCCCCCC
Confidence 56899999999 9999999999999999 999999999999999999 9999999998 8899999999
Q ss_pred ChHHHHHHHcCCHHHHHHHHhc-------CCccccccccCCCCchhhhh
Q 039483 224 WTPIHYAAYHRNYLILKLILKI-------DRTAAKIADKDRKMTALHLV 265 (360)
Q Consensus 224 ~t~Lh~A~~~~~~~~v~~Ll~~-------g~~~~~~~d~~~g~tpLh~A 265 (360)
+||||+|+..|+.+++++|+++ |++. +..+. .|.+|+..+
T Consensus 149 ~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~ga~~-~~~~~-~g~~~~~~~ 195 (664)
T PTZ00322 149 KTPLELAEENGFREVVQLLSRHSQCHFELGANA-KPDSF-TGKPPSLED 195 (664)
T ss_pred CCHHHHHHHCCcHHHHHHHHhCCCcccccCCCC-Ccccc-CCCCccchh
Confidence 9999999999999999999988 8888 77777 888887655
|
|
| >PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.5e-12 Score=86.35 Aligned_cols=51 Identities=25% Similarity=0.412 Sum_probs=33.1
Q ss_pred cccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHh
Q 039483 70 RQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEA 140 (360)
Q Consensus 70 ~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a 140 (360)
+.++ +.+|..|.|| ||+||..|+.++|++|++.|++++. +|..|+||||+|
T Consensus 6 ~~~~-n~~d~~G~T~-LH~A~~~g~~~~v~~Ll~~g~d~~~------------------~d~~G~Tpl~~A 56 (56)
T PF13857_consen 6 PADV-NAQDKYGNTP-LHWAARYGHSEVVRLLLQNGADPNA------------------KDKDGQTPLHYA 56 (56)
T ss_dssp T--T-T---TTS--H-HHHHHHHT-HHHHHHHHHCT--TT---------------------TTS--HHHH-
T ss_pred cCCC-cCcCCCCCcH-HHHHHHcCcHHHHHHHHHCcCCCCC------------------CcCCCCCHHHhC
Confidence 3677 9999999999 9999999999999999999999998 999999999886
|
|
| >PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.1e-11 Score=83.23 Aligned_cols=54 Identities=37% Similarity=0.406 Sum_probs=44.2
Q ss_pred CCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHH
Q 039483 179 ERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLIL 243 (360)
Q Consensus 179 g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll 243 (360)
|+||||+|+..|+. +++++|++.+ .+++.+|.+|+||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~----------~~~~~Ll~~~-~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNL----------EIVKLLLEHG-ADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-H----------HHHHHHHHTT-SGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCH----------HHHHHHHHCC-CCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 68999999999999 9999999997 889999999999999999999999999986
|
... |
| >KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.6e-11 Score=114.28 Aligned_cols=104 Identities=24% Similarity=0.143 Sum_probs=93.1
Q ss_pred HHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCCh
Q 039483 146 LCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWT 225 (360)
Q Consensus 146 L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t 225 (360)
|.-|+..|. .++|+.++..-.++.. .+..|.|+||.|+-.|+. +||++|++.+ +++|..|.+|||
T Consensus 554 LLDaaLeGE-ldlVq~~i~ev~DpSq---pNdEGITaLHNAiCaghy----------eIVkFLi~~g-anVNa~DSdGWT 618 (752)
T KOG0515|consen 554 LLDAALEGE-LDLVQRIIYEVTDPSQ---PNDEGITALHNAICAGHY----------EIVKFLIEFG-ANVNAADSDGWT 618 (752)
T ss_pred HHhhhhcch-HHHHHHHHHhhcCCCC---CCccchhHHhhhhhcchh----------HHHHHHHhcC-CcccCccCCCCc
Confidence 456788899 9999999999888888 888999999999999999 9999999999 999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhh
Q 039483 226 PIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLV 265 (360)
Q Consensus 226 ~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A 265 (360)
|||+|+.+++..+++.|++.|+-+ ....-+++.|+..-+
T Consensus 619 PLHCAASCNnv~~ckqLVe~Gaav-fAsTlSDmeTa~eKC 657 (752)
T KOG0515|consen 619 PLHCAASCNNVPMCKQLVESGAAV-FASTLSDMETAAEKC 657 (752)
T ss_pred hhhhhhhcCchHHHHHHHhccceE-Eeeecccccchhhhc
Confidence 999999999999999999999988 444444777876544
|
|
| >PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.5e-11 Score=81.52 Aligned_cols=54 Identities=28% Similarity=0.372 Sum_probs=44.6
Q ss_pred CCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHH
Q 039483 81 GDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVV 160 (360)
Q Consensus 81 g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~ 160 (360)
|.|| ||.||+.|+.+++++|+++|.+++. +|.+|. ||||.|+..|+ .++++
T Consensus 1 g~t~-lh~A~~~g~~~~~~~Ll~~~~din~------------------~d~~g~---------t~lh~A~~~g~-~~~~~ 51 (54)
T PF13637_consen 1 GRTP-LHWAARSGNLEIVKLLLEHGADINA------------------QDEDGR---------TPLHYAAKNGN-IDIVK 51 (54)
T ss_dssp SSBH-HHHHHHTT-HHHHHHHHHTTSGTT-------------------B-TTS-----------HHHHHHHTT--HHHHH
T ss_pred CChH-HHHHHHhCCHHHHHHHHHCCCCCCC------------------CCCCCC---------CHHHHHHHccC-HHHHH
Confidence 7899 9999999999999999999999988 788885 78888889999 99999
Q ss_pred HHH
Q 039483 161 AIL 163 (360)
Q Consensus 161 ~Ll 163 (360)
+|+
T Consensus 52 ~Ll 54 (54)
T PF13637_consen 52 FLL 54 (54)
T ss_dssp HHH
T ss_pred HHC
Confidence 986
|
... |
| >PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.6e-11 Score=121.80 Aligned_cols=106 Identities=14% Similarity=-0.021 Sum_probs=93.1
Q ss_pred ChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHH
Q 039483 83 TRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAI 162 (360)
Q Consensus 83 tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~L 162 (360)
++ |+.|+..|+.++++.|++.|++++. +|..|. ||||+|+..|+ .+++++|
T Consensus 84 ~~-L~~aa~~G~~~~vk~LL~~Gadin~------------------~d~~G~---------TpLh~Aa~~g~-~eiv~~L 134 (664)
T PTZ00322 84 VE-LCQLAASGDAVGARILLTGGADPNC------------------RDYDGR---------TPLHIACANGH-VQVVRVL 134 (664)
T ss_pred HH-HHHHHHcCCHHHHHHHHHCCCCCCC------------------cCCCCC---------cHHHHHHHCCC-HHHHHHH
Confidence 35 8899999999999999999999988 788885 88888899999 9999999
Q ss_pred HhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhc-------CccccccccCCCChHHHHHH
Q 039483 163 LKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEG-------KKSMIKGIDQCWWTPIHYAA 231 (360)
Q Consensus 163 l~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~-------~~~~i~~~d~~g~t~Lh~A~ 231 (360)
++.|++++. +|..|.||||+|+..++. +++++|+.+ + ++.+..+..|.+|+..+.
T Consensus 135 L~~Gadvn~---~d~~G~TpLh~A~~~g~~----------~iv~~Ll~~~~~~~~~g-a~~~~~~~~g~~~~~~~~ 196 (664)
T PTZ00322 135 LEFGADPTL---LDKDGKTPLELAEENGFR----------EVVQLLSRHSQCHFELG-ANAKPDSFTGKPPSLEDS 196 (664)
T ss_pred HHCCCCCCC---CCCCCCCHHHHHHHCCcH----------HHHHHHHhCCCcccccC-CCCCccccCCCCccchhh
Confidence 999999999 999999999999999999 999999988 4 555666677777765543
|
|
| >KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.22 E-value=4.4e-11 Score=103.79 Aligned_cols=133 Identities=18% Similarity=0.156 Sum_probs=115.1
Q ss_pred CCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCC
Q 039483 179 ERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRK 258 (360)
Q Consensus 179 g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g 258 (360)
-..||.-++..++. +.+..|++.. ..++..|..|.++|..|+..|+.+++++|++.|+|+....+. .+
T Consensus 12 ~~~~Lle~i~Kndt----------~~a~~LLs~v-r~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg-~~ 79 (396)
T KOG1710|consen 12 PKSPLLEAIDKNDT----------EAALALLSTV-RQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHG-TL 79 (396)
T ss_pred hhhHHHHHHccCcH----------HHHHHHHHHh-hhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCccccc-cc
Confidence 45788888899999 9999999876 678999999999999999999999999999999999434455 89
Q ss_pred CchhhhhhcCCccc-ccccc--cccCccCCCCCCcHHHHHHHcCCHHHHHHHhhhhcc-----ccCCCCCCCC
Q 039483 259 MTALHLVHGPKGCQ-NNMLA--SSLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGRVKA-----TMRPSTSKIE 323 (360)
Q Consensus 259 ~tpLh~A~~~~~~~-~~~L~--~~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~~~~-----~~~p~~~~~~ 323 (360)
.||||+|+..|+.+ -++|+ ++.....|.-|+|+-..|+.-|+.+++..+..++.. ++.|.|++.+
T Consensus 80 YTpLmFAALSGn~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iINN~~t~~~leyyt~p~g~~~e 152 (396)
T KOG1710|consen 80 YTPLMFAALSGNQDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAIINNHITIDVLEYYTRPKGYEGE 152 (396)
T ss_pred ccHHHHHHHcCCchHHHHHHhccCccccccchhhhHHHHHHHhcchHHHHHHhccccHHHHHHhccccccCCC
Confidence 99999999999999 55566 588888999999999999999999999988776433 8888887544
|
|
| >KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.1e-10 Score=108.94 Aligned_cols=119 Identities=16% Similarity=0.031 Sum_probs=100.0
Q ss_pred HHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhh
Q 039483 86 RHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKS 165 (360)
Q Consensus 86 Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~ 165 (360)
|.-|+.-|.+++|+..+..--|+.. .|++|. |+||-|++.|| .+||++|+..
T Consensus 554 LLDaaLeGEldlVq~~i~ev~DpSq------------------pNdEGI---------TaLHNAiCagh-yeIVkFLi~~ 605 (752)
T KOG0515|consen 554 LLDAALEGELDLVQRIIYEVTDPSQ------------------PNDEGI---------TALHNAICAGH-YEIVKFLIEF 605 (752)
T ss_pred HHhhhhcchHHHHHHHHHhhcCCCC------------------CCccch---------hHHhhhhhcch-hHHHHHHHhc
Confidence 3557888999999999988877776 788885 78888899999 9999999999
Q ss_pred CCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHH--HcCCHHHHHHHH
Q 039483 166 CTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAA--YHRNYLILKLIL 243 (360)
Q Consensus 166 g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~--~~~~~~~v~~Ll 243 (360)
|+++|. .|..|+||||+|+..++. .+++.|++.|.+..-..-.++.|+..-+- .-|..+|.+||-
T Consensus 606 ganVNa---~DSdGWTPLHCAASCNnv----------~~ckqLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~ 672 (752)
T KOG0515|consen 606 GANVNA---ADSDGWTPLHCAASCNNV----------PMCKQLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLY 672 (752)
T ss_pred CCcccC---ccCCCCchhhhhhhcCch----------HHHHHHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHH
Confidence 999999 999999999999999999 99999999996655555567777755442 446788999987
Q ss_pred hc
Q 039483 244 KI 245 (360)
Q Consensus 244 ~~ 245 (360)
..
T Consensus 673 ~v 674 (752)
T KOG0515|consen 673 GV 674 (752)
T ss_pred HH
Confidence 43
|
|
| >KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.7e-08 Score=92.39 Aligned_cols=86 Identities=17% Similarity=0.176 Sum_probs=78.2
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-ccccc--cccCccCCCCCCcHHHHHHHcCCH
Q 039483 225 TPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLA--SSLMDEGDAKGNTTVHFFAAVHRK 301 (360)
Q Consensus 225 t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~--~~~~~~~d~~g~Tpl~~A~~~~~~ 301 (360)
.-||..++.|+.+..--||..|+++ |..+.+.|.||||+|++.|+.. +++|+ +++++..|.+|.||+.+|-..|+.
T Consensus 135 rQLhasvRt~nlet~LRll~lGA~~-N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~ 213 (669)
T KOG0818|consen 135 KQLHSSVRTGNLETCLRLLSLGAQA-NFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHH 213 (669)
T ss_pred HHHHHHhhcccHHHHHHHHHccccc-CCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCch
Confidence 3589999999999999999999999 8887779999999999999988 77765 899999999999999999999999
Q ss_pred HHHHHHhhhh
Q 039483 302 EIFDDLSGRV 311 (360)
Q Consensus 302 ~i~~~l~~~~ 311 (360)
++.+.|.+.+
T Consensus 214 ~laeRl~e~~ 223 (669)
T KOG0818|consen 214 ELAERLVEIQ 223 (669)
T ss_pred HHHHHHHHHH
Confidence 9999888753
|
|
| >PF13606 Ank_3: Ankyrin repeat | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.1e-08 Score=59.39 Aligned_cols=30 Identities=33% Similarity=0.427 Sum_probs=27.9
Q ss_pred CCCChHHHHHHhcCCHHHHHHHHHhccccCc
Q 039483 80 KGDTRSRHVAAKFDHCDIVSVLIERAKLVQH 110 (360)
Q Consensus 80 ~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~ 110 (360)
+|+|| ||+||+.|+.++|++|+++|++++.
T Consensus 1 ~G~T~-Lh~A~~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 1 NGNTP-LHLAASNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred CCCCH-HHHHHHhCCHHHHHHHHHcCCCCCC
Confidence 48999 9999999999999999999998863
|
|
| >KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.68 E-value=1.2e-07 Score=89.43 Aligned_cols=125 Identities=13% Similarity=0.131 Sum_probs=101.6
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHh
Q 039483 25 IDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIER 104 (360)
Q Consensus 25 ~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~ 104 (360)
+...|..|+.++|+=.++..-. + +-.+ -.++.+..|. ||+|+.-|+-++|++++++
T Consensus 866 iseeil~av~~~D~~klqE~h~---~-------------------gg~l-l~~~~~~~sl-lh~a~~tg~~eivkyildh 921 (1004)
T KOG0782|consen 866 ISEEILRAVLSSDLMKLQETHL---N-------------------GGSL-LIQGPDHCSL-LHYAAKTGNGEIVKYILDH 921 (1004)
T ss_pred ccHHHHHHHHhccHHHHHHHHh---c-------------------CCce-EeeCcchhhH-HHHHHhcCChHHHHHHHhc
Confidence 4445777888877655544322 1 3344 4678888999 9999999999999999999
Q ss_pred ccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHH
Q 039483 105 AKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALH 184 (360)
Q Consensus 105 g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh 184 (360)
|.. +++...|+.|. |+||.|+..++ ..++++|++.|+++.. +|..|.||-.
T Consensus 922 ~p~----------------elld~~de~ge---------t~lhkaa~~~~-r~vc~~lvdagasl~k---td~kg~tp~e 972 (1004)
T KOG0782|consen 922 GPS----------------ELLDMADETGE---------TALHKAACQRN-RAVCQLLVDAGASLRK---TDSKGKTPQE 972 (1004)
T ss_pred CCH----------------HHHHHHhhhhh---------HHHHHHHHhcc-hHHHHHHHhcchhhee---cccCCCChHH
Confidence 963 66667888886 77778888888 9999999999999998 9999999999
Q ss_pred HHHhcCCcccccccCChHHHHHHHHhcC
Q 039483 185 AATMHIDLCKFNHTLSNDCAVQQLFEGK 212 (360)
Q Consensus 185 ~A~~~~~~~~~~~~~~~~~~~~~Ll~~~ 212 (360)
.|-+.|++ +++.+|-...
T Consensus 973 raqqa~d~----------dlaayle~rq 990 (1004)
T KOG0782|consen 973 RAQQAGDP----------DLAAYLESRQ 990 (1004)
T ss_pred HHHhcCCc----------hHHHHHhhhh
Confidence 99999999 9999886553
|
|
| >PF13606 Ank_3: Ankyrin repeat | Back alignment and domain information |
|---|
Probab=98.60 E-value=5.8e-08 Score=56.28 Aligned_cols=28 Identities=32% Similarity=0.326 Sum_probs=26.9
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCcc
Q 039483 222 CWWTPIHYAAYHRNYLILKLILKIDRTA 249 (360)
Q Consensus 222 ~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~ 249 (360)
+|+||||+||..|+.+++++|+++|+|+
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadv 28 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADV 28 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCC
Confidence 5899999999999999999999999998
|
|
| >KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.58 E-value=2.4e-07 Score=86.25 Aligned_cols=101 Identities=15% Similarity=0.103 Sum_probs=87.4
Q ss_pred hcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCC-CCCcHHHHHHhcCCcccccccCChHHHH
Q 039483 127 RMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAP-MERQALHAATMHIDLCKFNHTLSNDCAV 205 (360)
Q Consensus 127 ~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~-~g~t~Lh~A~~~~~~~~~~~~~~~~~~~ 205 (360)
..+|.+|.|+=... -.||..++.|+ .++.-.||..|+++|+ .++ .|.||||+|++.|+. .-+
T Consensus 121 ~~rDdD~~~~~~Ls---rQLhasvRt~n-let~LRll~lGA~~N~---~hpekg~TpLHvAAk~Gq~----------~Q~ 183 (669)
T KOG0818|consen 121 PCRDDDSVTAKDLS---KQLHSSVRTGN-LETCLRLLSLGAQANF---FHPEKGNTPLHVAAKAGQI----------LQA 183 (669)
T ss_pred CCCCcchhhHHHHH---HHHHHHhhccc-HHHHHHHHHcccccCC---CCcccCCchhHHHHhccch----------hhh
Confidence 34666665543332 67999999999 9999999999999999 555 799999999999999 999
Q ss_pred HHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhc
Q 039483 206 QQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKI 245 (360)
Q Consensus 206 ~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ 245 (360)
++|.-+| +++...|..|.||+.+|-..|+-++.+-|++.
T Consensus 184 ElL~vYG-AD~~a~d~~GmtP~~~AR~~gH~~laeRl~e~ 222 (669)
T KOG0818|consen 184 ELLAVYG-ADPGAQDSSGMTPVDYARQGGHHELAERLVEI 222 (669)
T ss_pred hHHhhcc-CCCCCCCCCCCcHHHHHHhcCchHHHHHHHHH
Confidence 9999999 99999999999999999999998888777754
|
|
| >PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature | Back alignment and domain information |
|---|
Probab=98.56 E-value=7.5e-08 Score=57.34 Aligned_cols=31 Identities=32% Similarity=0.450 Sum_probs=29.1
Q ss_pred CCCChHHHHHHhcCCHHHHHHHHHhccccCcc
Q 039483 80 KGDTRSRHVAAKFDHCDIVSVLIERAKLVQHE 111 (360)
Q Consensus 80 ~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~ 111 (360)
+|.|| ||+|+..|+.+++++|+++|++++.+
T Consensus 1 dG~Tp-Lh~A~~~~~~~~v~~Ll~~ga~~~~~ 31 (33)
T PF00023_consen 1 DGNTP-LHYAAQRGHPDIVKLLLKHGADINAR 31 (33)
T ss_dssp TSBBH-HHHHHHTTCHHHHHHHHHTTSCTTCB
T ss_pred CcccH-HHHHHHHHHHHHHHHHHHCcCCCCCC
Confidence 58999 99999999999999999999999873
|
Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A .... |
| >KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown] | Back alignment and domain information |
|---|
Probab=98.55 E-value=4.3e-08 Score=96.31 Aligned_cols=87 Identities=16% Similarity=0.087 Sum_probs=79.1
Q ss_pred cccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCC-CCchHHHhhhcCHHHH
Q 039483 70 RQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKE-KHTTLHEAYNKIPLCM 148 (360)
Q Consensus 70 ~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~t~Lh~a~~~t~L~~ 148 (360)
.... ++.|..|+|+ ||+|+..|..+++++|+++|+++.. +|.+ | +||||.
T Consensus 42 ~n~a-nikD~~GR~a-lH~~~S~~k~~~l~wLlqhGidv~v------------------qD~ESG---------~taLHR 92 (1267)
T KOG0783|consen 42 QNLA-NIKDRYGRTA-LHIAVSENKNSFLRWLLQHGIDVFV------------------QDEESG---------YTALHR 92 (1267)
T ss_pred hhhh-hHHHhhccce-eeeeeccchhHHHHHHHhcCceeee------------------cccccc---------chHhhH
Confidence 5556 8899999999 9999999999999999999999988 6655 4 699999
Q ss_pred HHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhc
Q 039483 149 AAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMH 189 (360)
Q Consensus 149 A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~ 189 (360)
|+.+|+ ++|+-.||++|.++.. +|+.|.+||..-++.
T Consensus 93 aiyyG~-idca~lLL~~g~SL~i---~Dkeglsplq~~~r~ 129 (1267)
T KOG0783|consen 93 AIYYGN-IDCASLLLSKGRSLRI---KDKEGLSPLQFLSRV 129 (1267)
T ss_pred hhhhch-HHHHHHHHhcCCceEE---ecccCCCHHHHHhhc
Confidence 999999 9999999999999988 999999999988773
|
|
| >KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown] | Back alignment and domain information |
|---|
Probab=98.53 E-value=4.9e-08 Score=95.91 Aligned_cols=81 Identities=25% Similarity=0.266 Sum_probs=76.4
Q ss_pred CCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccC-CCChHHHHHHHcCCHHHHHHHHhcCCcccccc
Q 039483 175 KAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQ-CWWTPIHYAAYHRNYLILKLILKIDRTAAKIA 253 (360)
Q Consensus 175 ~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~-~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~ 253 (360)
+|..|+|+||.++..+.. +++++|+.+| .++..+|. .|+||||-|..+|+++++..||.+|+.+ .++
T Consensus 48 kD~~GR~alH~~~S~~k~----------~~l~wLlqhG-idv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL-~i~ 115 (1267)
T KOG0783|consen 48 KDRYGRTALHIAVSENKN----------SFLRWLLQHG-IDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSL-RIK 115 (1267)
T ss_pred HHhhccceeeeeeccchh----------HHHHHHHhcC-ceeeeccccccchHhhHhhhhchHHHHHHHHhcCCce-EEe
Confidence 899999999999999999 9999999998 88888885 7999999999999999999999999999 999
Q ss_pred ccCCCCchhhhhhcC
Q 039483 254 DKDRKMTALHLVHGP 268 (360)
Q Consensus 254 d~~~g~tpLh~A~~~ 268 (360)
|+ .|..||....+-
T Consensus 116 Dk-eglsplq~~~r~ 129 (1267)
T KOG0783|consen 116 DK-EGLSPLQFLSRV 129 (1267)
T ss_pred cc-cCCCHHHHHhhc
Confidence 99 999999988663
|
|
| >PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.3e-07 Score=56.23 Aligned_cols=32 Identities=38% Similarity=0.379 Sum_probs=30.0
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCccccccc
Q 039483 222 CWWTPIHYAAYHRNYLILKLILKIDRTAAKIAD 254 (360)
Q Consensus 222 ~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d 254 (360)
+|+||||+|+.+|+.+++++|+++|+++ +.+|
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~-~~~d 32 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADI-NARD 32 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCT-TCBC
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCC-CCCC
Confidence 5899999999999999999999999999 7776
|
Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A .... |
| >KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.2e-07 Score=87.95 Aligned_cols=103 Identities=18% Similarity=0.099 Sum_probs=92.3
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-cccccc---ccCccCCCCCCcHHHHHH
Q 039483 221 QCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLAS---SLMDEGDAKGNTTVHFFA 296 (360)
Q Consensus 221 ~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~~---~~~~~~d~~g~Tpl~~A~ 296 (360)
.++..++.+|++.|.+..++.+.-.|.|+ ..+|- +.+|+||+|+..|+.+ +++|+. .+.+.+|.-|+|||+-|.
T Consensus 504 ~~~~i~~~~aa~~GD~~alrRf~l~g~D~-~~~Dy-D~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~ 581 (622)
T KOG0506|consen 504 NDTVINVMYAAKNGDLSALRRFALQGMDL-ETKDY-DDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAK 581 (622)
T ss_pred ccchhhhhhhhhcCCHHHHHHHHHhcccc-ccccc-ccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhH
Confidence 45667899999999999999999999999 99999 9999999999999999 999984 889999999999999999
Q ss_pred HcCCHHHHHHHhhhhccccCCCCCCCCCc
Q 039483 297 AVHRKEIFDDLSGRVKATMRPSTSKIENG 325 (360)
Q Consensus 297 ~~~~~~i~~~l~~~~~~~~~p~~~~~~~~ 325 (360)
..++.+++++|.+....+++-+......+
T Consensus 582 ~F~h~~v~k~L~~~~~~y~~~~~~~~~~~ 610 (622)
T KOG0506|consen 582 HFKHKEVVKLLEEAQYPYTLMPEQDFEVG 610 (622)
T ss_pred hcCcHHHHHHHHHHhcccccCchhhhhhc
Confidence 99999999999999888877655544444
|
|
| >KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.46 E-value=2.8e-07 Score=85.48 Aligned_cols=86 Identities=19% Similarity=0.075 Sum_probs=54.5
Q ss_pred CCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHH-hcCCccccccccC
Q 039483 178 MERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLIL-KIDRTAAKIADKD 256 (360)
Q Consensus 178 ~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll-~~g~~~~~~~d~~ 256 (360)
.+..++.+|++.|+. ..++.+.-.+ .+++.+|.+.+|+||.||..|+++++++|+ ..+.++ +.+|+
T Consensus 505 ~~~i~~~~aa~~GD~----------~alrRf~l~g-~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~-~~kDR- 571 (622)
T KOG0506|consen 505 DTVINVMYAAKNGDL----------SALRRFALQG-MDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDP-DPKDR- 571 (622)
T ss_pred cchhhhhhhhhcCCH----------HHHHHHHHhc-ccccccccccchhheeecccCceeHHHHHHHHHcCCC-Chhhc-
Confidence 344556666666666 6666666555 556666666666666666666666666666 335555 66666
Q ss_pred CCCchhhhhhcCCccc-cccc
Q 039483 257 RKMTALHLVHGPKGCQ-NNML 276 (360)
Q Consensus 257 ~g~tpLh~A~~~~~~~-~~~L 276 (360)
.|+|||.-|...++.+ +++|
T Consensus 572 w~rtPlDdA~~F~h~~v~k~L 592 (622)
T KOG0506|consen 572 WGRTPLDDAKHFKHKEVVKLL 592 (622)
T ss_pred cCCCcchHhHhcCcHHHHHHH
Confidence 6666666666666666 4444
|
|
| >KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.41 E-value=5.7e-07 Score=85.07 Aligned_cols=111 Identities=16% Similarity=0.105 Sum_probs=82.8
Q ss_pred HHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCcc-ccccccCCCC
Q 039483 146 LCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKS-MIKGIDQCWW 224 (360)
Q Consensus 146 L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~-~i~~~d~~g~ 224 (360)
+..|+..++ .--++.....|-++-. ++....+.||+|++.|+- ++|+++++++|. .++..|..|.
T Consensus 870 il~av~~~D-~~klqE~h~~gg~ll~---~~~~~~sllh~a~~tg~~----------eivkyildh~p~elld~~de~ge 935 (1004)
T KOG0782|consen 870 ILRAVLSSD-LMKLQETHLNGGSLLI---QGPDHCSLLHYAAKTGNG----------EIVKYILDHGPSELLDMADETGE 935 (1004)
T ss_pred HHHHHHhcc-HHHHHHHHhcCCceEe---eCcchhhHHHHHHhcCCh----------HHHHHHHhcCCHHHHHHHhhhhh
Confidence 445555665 5555556666767766 888888888999888888 889998888753 4566778888
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc
Q 039483 225 TPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ 272 (360)
Q Consensus 225 t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~ 272 (360)
|+||-|+..++..++.+|++.|+.+ ...|. .|.||-.-|...+..+
T Consensus 936 t~lhkaa~~~~r~vc~~lvdagasl-~ktd~-kg~tp~eraqqa~d~d 981 (1004)
T KOG0782|consen 936 TALHKAACQRNRAVCQLLVDAGASL-RKTDS-KGKTPQERAQQAGDPD 981 (1004)
T ss_pred HHHHHHHHhcchHHHHHHHhcchhh-eeccc-CCCChHHHHHhcCCch
Confidence 8899888888888888888888888 66666 6777766665544444
|
|
| >KOG0522 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.20 E-value=3.5e-06 Score=79.57 Aligned_cols=86 Identities=22% Similarity=0.263 Sum_probs=70.7
Q ss_pred HHHHHHhcCCcHHHHHHHH-hh-CCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCC
Q 039483 145 PLCMAAEYEHSSHTVVAIL-KS-CTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQC 222 (360)
Q Consensus 145 ~L~~A~~~g~~~~~~~~Ll-~~-g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~ 222 (360)
|+|.+....+ .+-....+ .. +..++. +|..|+||||.|+..|+. +.++.|+..+ +++..+|..
T Consensus 23 ~lh~~~~~~~-~~sl~~el~~~~~~~id~---~D~~g~TpLhlAV~Lg~~----------~~a~~Ll~a~-Adv~~kN~~ 87 (560)
T KOG0522|consen 23 PLHWAVVTTD-SDSLEQELLAKVSLVIDR---RDPPGRTPLHLAVRLGHV----------EAARILLSAG-ADVSIKNNE 87 (560)
T ss_pred ccchhhhccc-hhhHHHHHhhhhhceecc---ccCCCCccHHHHHHhcCH----------HHHHHHHhcC-CCccccccc
Confidence 4888888777 55544433 33 334555 899999999999999999 9999999999 889999999
Q ss_pred CChHHHHHHHcCCHHHHHHHHhc
Q 039483 223 WWTPIHYAAYHRNYLILKLILKI 245 (360)
Q Consensus 223 g~t~Lh~A~~~~~~~~v~~Ll~~ 245 (360)
||+|||.|+.+|+.+++..++.+
T Consensus 88 gWs~L~EAv~~g~~q~i~~vlr~ 110 (560)
T KOG0522|consen 88 GWSPLHEAVSTGNEQIITEVLRH 110 (560)
T ss_pred cccHHHHHHHcCCHHHHHHHHHH
Confidence 99999999999999888777743
|
|
| >KOG0522 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.16 E-value=5.8e-06 Score=78.12 Aligned_cols=89 Identities=16% Similarity=0.218 Sum_probs=70.7
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHhcc
Q 039483 27 PNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIERAK 106 (360)
Q Consensus 27 ~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~ 106 (360)
.|+|.++...+.+.+...+..+ . ...+ +..|..|.|| ||+|+..|+.+.++.|+..|+
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~--~------------------~~~i-d~~D~~g~Tp-LhlAV~Lg~~~~a~~Ll~a~A 79 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAK--V------------------SLVI-DRRDPPGRTP-LHLAVRLGHVEAARILLSAGA 79 (560)
T ss_pred cccchhhhccchhhHHHHHhhh--h------------------hcee-ccccCCCCcc-HHHHHHhcCHHHHHHHHhcCC
Confidence 5699999999999998876643 1 4456 8889999999 999999999999999999999
Q ss_pred ccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhh
Q 039483 107 LVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKS 165 (360)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~ 165 (360)
++.. +|.+|+ +|||.|+..|+ ..++..++.+
T Consensus 80 dv~~------------------kN~~gW---------s~L~EAv~~g~-~q~i~~vlr~ 110 (560)
T KOG0522|consen 80 DVSI------------------KNNEGW---------SPLHEAVSTGN-EQIITEVLRH 110 (560)
T ss_pred Cccc------------------cccccc---------cHHHHHHHcCC-HHHHHHHHHH
Confidence 9988 899996 55555556666 5555555443
|
|
| >KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.07 E-value=1.2e-05 Score=76.64 Aligned_cols=94 Identities=18% Similarity=0.071 Sum_probs=76.6
Q ss_pred CHHHHHHhcCCcHHHHHHHHhhCCCCCcccc-CCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCC
Q 039483 144 IPLCMAAEYEHSSHTVVAILKSCTSVSHIYM-KAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQC 222 (360)
Q Consensus 144 t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~-~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~ 222 (360)
..|..|....+ ...+..||.+|........ .+..|+|+||.||..|+. .+.++|+=++ .++-.+|..
T Consensus 626 qqLl~A~~~~D-l~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnV----------vl~QLLiWyg-~dv~~rda~ 693 (749)
T KOG0705|consen 626 QQLLRAVAAED-LQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNV----------VLAQLLIWYG-VDVMARDAH 693 (749)
T ss_pred HHHHHHHHHHH-HHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcch----------hHHHHHHHhC-ccceecccC
Confidence 34666777777 8888899999865332111 455789999999999999 9999999666 888899999
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCcc
Q 039483 223 WWTPIHYAAYHRNYLILKLILKIDRTA 249 (360)
Q Consensus 223 g~t~Lh~A~~~~~~~~v~~Ll~~g~~~ 249 (360)
|+|+|.||-+.|.-+++..|+++|...
T Consensus 694 g~t~l~yar~a~sqec~d~llq~gcp~ 720 (749)
T KOG0705|consen 694 GRTALFYARQAGSQECIDVLLQYGCPD 720 (749)
T ss_pred CchhhhhHhhcccHHHHHHHHHcCCCc
Confidence 999999999999999999999998754
|
|
| >KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.01 E-value=1.8e-05 Score=75.37 Aligned_cols=98 Identities=15% Similarity=0.108 Sum_probs=74.7
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHh
Q 039483 25 IDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIER 104 (360)
Q Consensus 25 ~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~ 104 (360)
+-..|..|+...|+..+-.|+...-.. +..- ...+.+|+|+ ||+||+.||..+.++|+=+
T Consensus 624 lgqqLl~A~~~~Dl~t~~lLLAhg~~~------------------e~~~-t~~~~~grt~-LHLa~~~gnVvl~QLLiWy 683 (749)
T KOG0705|consen 624 LGQQLLRAVAAEDLQTAILLLAHGSRE------------------EVNE-TCGEGDGRTA-LHLAARKGNVVLAQLLIWY 683 (749)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccCch------------------hhhc-cccCCCCcch-hhhhhhhcchhHHHHHHHh
Confidence 345688888888887777777622111 1111 3345668999 9999999999999999999
Q ss_pred ccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCC
Q 039483 105 AKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVS 170 (360)
Q Consensus 105 g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~ 170 (360)
|+|+.. .|..|+ |+|++|-..|. .+|+..|+.+|+...
T Consensus 684 g~dv~~------------------rda~g~---------t~l~yar~a~s-qec~d~llq~gcp~e 721 (749)
T KOG0705|consen 684 GVDVMA------------------RDAHGR---------TALFYARQAGS-QECIDVLLQYGCPDE 721 (749)
T ss_pred Ccccee------------------cccCCc---------hhhhhHhhccc-HHHHHHHHHcCCCcc
Confidence 999988 888886 66666677888 999999999996543
|
|
| >KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.90 E-value=4.8e-05 Score=76.00 Aligned_cols=86 Identities=10% Similarity=0.098 Sum_probs=68.3
Q ss_pred CHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHhc
Q 039483 26 DPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIERA 105 (360)
Q Consensus 26 ~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g 105 (360)
......|++.||+-.|+..++..-. . .-.+ +-.|.-|+++ |++|+.+.|.+++++|++.+
T Consensus 26 e~~fL~a~E~gd~~~V~k~l~~~~~-~-----------------~lni-nc~d~lGr~a-l~iai~nenle~~eLLl~~~ 85 (822)
T KOG3609|consen 26 EKGFLLAHENGDVPLVAKALEYKAV-S-----------------KLNI-NCRDPLGRLA-LHIAIDNENLELQELLLDTS 85 (822)
T ss_pred hHHHHHHHHcCChHHHHHHHHhccc-c-----------------ccch-hccChHhhhc-eecccccccHHHHHHHhcCc
Confidence 3457789999999999999883211 1 3455 7788889999 99999999999999999876
Q ss_pred cccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhC
Q 039483 106 KLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSC 166 (360)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g 166 (360)
..+ | .+|..|+..|. .++|+.++.+.
T Consensus 86 ~~~------------------------g----------dALL~aI~~~~-v~~VE~ll~~~ 111 (822)
T KOG3609|consen 86 SEE------------------------G----------DALLLAIAVGS-VPLVELLLVHF 111 (822)
T ss_pred ccc------------------------c----------hHHHHHHHHHH-HHHHHHHHhcc
Confidence 422 2 57888899999 99999999875
|
|
| >KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] | Back alignment and domain information |
|---|
Probab=97.87 E-value=1.5e-05 Score=81.04 Aligned_cols=114 Identities=13% Similarity=0.121 Sum_probs=81.8
Q ss_pred cCHHHHHHhcCCcHHHHHHHHhh-CCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccC
Q 039483 143 KIPLCMAAEYEHSSHTVVAILKS-CTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQ 221 (360)
Q Consensus 143 ~t~L~~A~~~g~~~~~~~~Ll~~-g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~ 221 (360)
++.+|+++..+. .-+++.+++. |..... .|..|...+|.++ .++. +.+-+++......++.+|.
T Consensus 575 ~lllhL~a~~ly-awLie~~~e~~~~~~~e---ld~d~qgV~hfca-~lg~----------ewA~ll~~~~~~ai~i~D~ 639 (975)
T KOG0520|consen 575 MLLLHLLAELLY-AWLIEKVIEWAGSGDLE---LDRDGQGVIHFCA-ALGY----------EWAFLPISADGVAIDIRDR 639 (975)
T ss_pred hHHHHHHHHHhH-HHHHHHHhcccccCchh---hcccCCChhhHhh-hcCC----------ceeEEEEeecccccccccC
Confidence 577888888888 8888888886 555555 6777888888844 4445 5555555555577888999
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCccc-----cccccCCCCchhhhhhcCCccc
Q 039483 222 CWWTPIHYAAYHRNYLILKLILKIDRTAA-----KIADKDRKMTALHLVHGPKGCQ 272 (360)
Q Consensus 222 ~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~-----~~~d~~~g~tpLh~A~~~~~~~ 272 (360)
.||||||+|+.+|+..++..|+..|++.. ..... .|.|+..+|..+++..
T Consensus 640 ~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p-~g~ta~~la~s~g~~g 694 (975)
T KOG0520|consen 640 NGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETP-GGKTAADLARANGHKG 694 (975)
T ss_pred CCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCC-CCCchhhhhhcccccc
Confidence 99999999999999999999987776541 11222 5677777776666665
|
|
| >KOG0511 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00011 Score=66.92 Aligned_cols=60 Identities=17% Similarity=0.262 Sum_probs=53.9
Q ss_pred CHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHhc
Q 039483 26 DPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIERA 105 (360)
Q Consensus 26 ~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g 105 (360)
+-.|+.|++.||+|.|+.|++. +..+ |..|....+| |.+|+..||..+|++|+++|
T Consensus 37 f~elceacR~GD~d~v~~LVet----------------------gvnV-N~vD~fD~sp-L~lAsLcGHe~vvklLLenG 92 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVET----------------------GVNV-NAVDRFDSSP-LYLASLCGHEDVVKLLLENG 92 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHh----------------------CCCc-chhhcccccH-HHHHHHcCcHHHHHHHHHcC
Confidence 4569999999999999999995 5666 8889999999 99999999999999999999
Q ss_pred cccC
Q 039483 106 KLVQ 109 (360)
Q Consensus 106 ~~~~ 109 (360)
+-.+
T Consensus 93 AiC~ 96 (516)
T KOG0511|consen 93 AICS 96 (516)
T ss_pred Cccc
Confidence 7554
|
|
| >KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.59 E-value=7.6e-05 Score=76.27 Aligned_cols=82 Identities=20% Similarity=0.199 Sum_probs=74.6
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHH
Q 039483 79 AKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHT 158 (360)
Q Consensus 79 ~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~ 158 (360)
..|.|+ ||.|+..|..-++++|+++|+++|. .|..|. +|||.+...|+ ...
T Consensus 654 ~~~~s~-lh~a~~~~~~~~~e~ll~~ga~vn~------------------~d~~g~---------~plh~~~~~g~-~~~ 704 (785)
T KOG0521|consen 654 CIGCSL-LHVAVGTGDSGAVELLLQNGADVNA------------------LDSKGR---------TPLHHATASGH-TSI 704 (785)
T ss_pred hcccch-hhhhhccchHHHHHHHHhcCCcchh------------------hhccCC---------Ccchhhhhhcc-cch
Confidence 457899 9999999999999999999999988 888885 77788888999 999
Q ss_pred HHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCc
Q 039483 159 VVAILKSCTSVSHIYMKAPMERQALHAATMHIDL 192 (360)
Q Consensus 159 ~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~ 192 (360)
+..+++.|++++. .+..|.+|+++|....+.
T Consensus 705 ~~~ll~~~a~~~a---~~~~~~~~l~~a~~~~~~ 735 (785)
T KOG0521|consen 705 ACLLLKRGADPNA---FDPDGKLPLDIAMEAANA 735 (785)
T ss_pred hhhhccccccccc---cCccCcchhhHHhhhccc
Confidence 9999999999999 999999999999877665
|
|
| >KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00029 Score=70.55 Aligned_cols=132 Identities=18% Similarity=0.083 Sum_probs=101.2
Q ss_pred CHHHHHHhcCCcHHHHHHHHhhC----CCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccc
Q 039483 144 IPLCMAAEYEHSSHTVVAILKSC----TSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGI 219 (360)
Q Consensus 144 t~L~~A~~~g~~~~~~~~Ll~~g----~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~ 219 (360)
--...|++.|+ ...|+..+... .++|. .|..|+++|+.|+.+.+. ++.++|+++. ...
T Consensus 27 ~~fL~a~E~gd-~~~V~k~l~~~~~~~lninc---~d~lGr~al~iai~nenl----------e~~eLLl~~~-~~~--- 88 (822)
T KOG3609|consen 27 KGFLLAHENGD-VPLVAKALEYKAVSKLNINC---RDPLGRLALHIAIDNENL----------ELQELLLDTS-SEE--- 88 (822)
T ss_pred HHHHHHHHcCC-hHHHHHHHHhccccccchhc---cChHhhhceecccccccH----------HHHHHHhcCc-ccc---
Confidence 45678999999 99999988854 34666 899999999999999999 9999999887 221
Q ss_pred cCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCcccccccccccCc-cCCCCCCcHHHHHHHc
Q 039483 220 DQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQNNMLASSLMD-EGDAKGNTTVHFFAAV 298 (360)
Q Consensus 220 d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~~~~L~~~~~~-~~d~~g~Tpl~~A~~~ 298 (360)
..+|.+|...|..++|+.++.+.... . . .+. + .+.+ ..-..+-||+.+|+..
T Consensus 89 ----gdALL~aI~~~~v~~VE~ll~~~~~~-~---~-~~~-----~-------------~d~~~~~ft~ditPliLAAh~ 141 (822)
T KOG3609|consen 89 ----GDALLLAIAVGSVPLVELLLVHFVDA-P---Y-LER-----S-------------GDANSPHFTPDITPLMLAAHL 141 (822)
T ss_pred ----chHHHHHHHHHHHHHHHHHHhccccc-c---h-hcc-----c-------------cccCcccCCCCccHHHHHHHh
Confidence 45889999999999999999775433 1 1 111 1 0111 1123578999999999
Q ss_pred CCHHHHHHHhhhhccccCCCCC
Q 039483 299 HRKEIFDDLSGRVKATMRPSTS 320 (360)
Q Consensus 299 ~~~~i~~~l~~~~~~~~~p~~~ 320 (360)
++.||++.|+.+......|..+
T Consensus 142 NnyEil~~Ll~kg~~i~~PH~~ 163 (822)
T KOG3609|consen 142 NNFEILQCLLTRGHCIPIPHDI 163 (822)
T ss_pred cchHHHHHHHHcCCCCCCCccc
Confidence 9999999999987666666555
|
|
| >KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00014 Score=74.31 Aligned_cols=78 Identities=23% Similarity=0.200 Sum_probs=44.1
Q ss_pred CCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCC
Q 039483 178 MERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDR 257 (360)
Q Consensus 178 ~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~ 257 (360)
.|.|+||.|+..+.. -.+++|+..+ ++++..|..|++|+|.+...|+...+..++++|++. +..+. +
T Consensus 655 ~~~s~lh~a~~~~~~----------~~~e~ll~~g-a~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~-~a~~~-~ 721 (785)
T KOG0521|consen 655 IGCSLLHVAVGTGDS----------GAVELLLQNG-ADVNALDSKGRTPLHHATASGHTSIACLLLKRGADP-NAFDP-D 721 (785)
T ss_pred cccchhhhhhccchH----------HHHHHHHhcC-CcchhhhccCCCcchhhhhhcccchhhhhccccccc-cccCc-c
Confidence 455555555555555 5555555555 445555555555555555555555555555555555 55555 5
Q ss_pred CCchhhhhhcC
Q 039483 258 KMTALHLVHGP 268 (360)
Q Consensus 258 g~tpLh~A~~~ 268 (360)
|++|+++|...
T Consensus 722 ~~~~l~~a~~~ 732 (785)
T KOG0521|consen 722 GKLPLDIAMEA 732 (785)
T ss_pred CcchhhHHhhh
Confidence 55555555444
|
|
| >PF13962 PGG: Domain of unknown function | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00022 Score=55.54 Aligned_cols=47 Identities=30% Similarity=0.391 Sum_probs=40.6
Q ss_pred hccccCCCCCCC---CCccccccCCc-cchhHHHHHHHHHHHHHHHHHHHH
Q 039483 311 VKATMRPSTSKI---ENGAAILRGNT-AFQAFMVTYTIAMILSLLLSLFTF 357 (360)
Q Consensus 311 ~~~~~~p~~~~~---~~~~~~l~~~~-~f~~f~v~~~~a~~~s~~~~~~~~ 357 (360)
.-.+++|||+.+ +.|++++.+++ .|..|+++|++++++|++++++++
T Consensus 24 ~A~~tpPGG~~~~~~~~G~~il~~~~~~f~~F~~~nt~af~~S~~~i~~l~ 74 (113)
T PF13962_consen 24 QAAFTPPGGYWQDDDDAGTPILAKKPSAFKAFLISNTIAFFSSLAAIFLLI 74 (113)
T ss_pred HHhcCCCCCccccccCCCCchhccccchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 334999999944 47999998887 999999999999999999998855
|
|
| >KOG0511 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00049 Score=62.76 Aligned_cols=75 Identities=17% Similarity=0.110 Sum_probs=60.0
Q ss_pred CHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCC
Q 039483 144 IPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCW 223 (360)
Q Consensus 144 t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g 223 (360)
--|..||+.|+ .+.++.|++.|.++|. +|....+||.+|+..|+. .++++|++.| +....--.+|
T Consensus 38 ~elceacR~GD-~d~v~~LVetgvnVN~---vD~fD~spL~lAsLcGHe----------~vvklLLenG-AiC~rdtf~G 102 (516)
T KOG0511|consen 38 GELCEACRAGD-VDRVRYLVETGVNVNA---VDRFDSSPLYLASLCGHE----------DVVKLLLENG-AICSRDTFDG 102 (516)
T ss_pred HHHHHHhhccc-HHHHHHHHHhCCCcch---hhcccccHHHHHHHcCcH----------HHHHHHHHcC-CcccccccCc
Confidence 34789999999 9999999999999999 999999999999999999 9999999998 5322222345
Q ss_pred ChHHHHHHHcC
Q 039483 224 WTPIHYAAYHR 234 (360)
Q Consensus 224 ~t~Lh~A~~~~ 234 (360)
... |+++.+.
T Consensus 103 ~RC-~YgaLnd 112 (516)
T KOG0511|consen 103 DRC-HYGALND 112 (516)
T ss_pred chh-hhhhhhH
Confidence 443 5555553
|
|
| >KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.00069 Score=56.16 Aligned_cols=70 Identities=16% Similarity=0.131 Sum_probs=63.0
Q ss_pred CCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcC
Q 039483 167 TSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKID 246 (360)
Q Consensus 167 ~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g 246 (360)
.+++. +|..|+|+++.|+..|+. +.+.+|+.++.+.+...|..|.+++.+|-+.|..++++.|.+..
T Consensus 3 ~~in~---rD~fgWTalmcaa~eg~~----------eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~ 69 (223)
T KOG2384|consen 3 GNINA---RDAFGWTALMCAAMEGSN----------EAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFEND 69 (223)
T ss_pred CCccc---hhhhcchHHHHHhhhcch----------hHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHh
Confidence 46777 999999999999999999 99999999998889999999999999999999999999998765
Q ss_pred Ccc
Q 039483 247 RTA 249 (360)
Q Consensus 247 ~~~ 249 (360)
.+-
T Consensus 70 ~et 72 (223)
T KOG2384|consen 70 RET 72 (223)
T ss_pred ccC
Confidence 443
|
|
| >KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00023 Score=72.69 Aligned_cols=128 Identities=12% Similarity=-0.050 Sum_probs=93.4
Q ss_pred CCCCCCCCChHHHHHHhcCCHHHHHHHHHh-ccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcC
Q 039483 75 QPVTAKGDTRSRHVAAKFDHCDIVSVLIER-AKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYE 153 (360)
Q Consensus 75 ~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g 153 (360)
....-.|.|. +|+++..+..-+++.+++- |..... .|.+|. -.+|+++..|
T Consensus 568 ~~~~~r~~ll-lhL~a~~lyawLie~~~e~~~~~~~e------------------ld~d~q---------gV~hfca~lg 619 (975)
T KOG0520|consen 568 SSVNFRDMLL-LHLLAELLYAWLIEKVIEWAGSGDLE------------------LDRDGQ---------GVIHFCAALG 619 (975)
T ss_pred ccCCCcchHH-HHHHHHHhHHHHHHHHhcccccCchh------------------hcccCC---------ChhhHhhhcC
Confidence 4555678999 9999999999999888875 443333 555554 4455544444
Q ss_pred CcHHHHHHH-HhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCcc-----ccccccCCCChHH
Q 039483 154 HSSHTVVAI-LKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKS-----MIKGIDQCWWTPI 227 (360)
Q Consensus 154 ~~~~~~~~L-l~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~-----~i~~~d~~g~t~L 227 (360)
.+++-++ ...|..++. +|..|+||||||+..|+. .++..|++.+.. ++......|.|+-
T Consensus 620 --~ewA~ll~~~~~~ai~i---~D~~G~tpL~wAa~~G~e----------~l~a~l~~lga~~~~~tdps~~~p~g~ta~ 684 (975)
T KOG0520|consen 620 --YEWAFLPISADGVAIDI---RDRNGWTPLHWAAFRGRE----------KLVASLIELGADPGAVTDPSPETPGGKTAA 684 (975)
T ss_pred --CceeEEEEeeccccccc---ccCCCCcccchHhhcCHH----------HHHHHHHHhccccccccCCCCCCCCCCchh
Confidence 4444444 346778888 999999999999999999 999999976622 1223345789999
Q ss_pred HHHHHcCCHHHHHHHHhc
Q 039483 228 HYAAYHRNYLILKLILKI 245 (360)
Q Consensus 228 h~A~~~~~~~~v~~Ll~~ 245 (360)
-+|..+|+..+.-+|-+.
T Consensus 685 ~la~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 685 DLARANGHKGIAGYLSEK 702 (975)
T ss_pred hhhhcccccchHHHHhhh
Confidence 999999988777776544
|
|
| >KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0013 Score=54.50 Aligned_cols=71 Identities=21% Similarity=0.129 Sum_probs=60.4
Q ss_pred ccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHhc-cccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHH
Q 039483 71 QKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIERA-KLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMA 149 (360)
Q Consensus 71 ~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A 149 (360)
..+ +.+|..|.|| +..|+..|+.+.|.+|+.+| +.+.. .|..|. +++.+|
T Consensus 3 ~~i-n~rD~fgWTa-lmcaa~eg~~eavsyllgrg~a~vgv------------------~d~ssl---------daaqla 53 (223)
T KOG2384|consen 3 GNI-NARDAFGWTA-LMCAAMEGSNEAVSYLLGRGVAFVGV------------------TDESSL---------DAAQLA 53 (223)
T ss_pred CCc-cchhhhcchH-HHHHhhhcchhHHHHHhccCcccccc------------------cccccc---------hHHHHH
Confidence 456 8899999999 99999999999999999999 67766 677774 778888
Q ss_pred HhcCCcHHHHHHHHhhCCCCCc
Q 039483 150 AEYEHSSHTVVAILKSCTSVSH 171 (360)
Q Consensus 150 ~~~g~~~~~~~~Ll~~g~~~~~ 171 (360)
-..|. .+++..|.+.-.+-..
T Consensus 54 ek~g~-~~fvh~lfe~~~ets~ 74 (223)
T KOG2384|consen 54 EKGGA-QAFVHSLFENDRETSH 74 (223)
T ss_pred HhcCh-HHHHHHHHHHhccCCC
Confidence 89999 9999999987544444
|
|
| >smart00248 ANK ankyrin repeats | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.002 Score=35.50 Aligned_cols=29 Identities=24% Similarity=0.460 Sum_probs=25.7
Q ss_pred CCCChHHHHHHhcCCHHHHHHHHHhccccC
Q 039483 80 KGDTRSRHVAAKFDHCDIVSVLIERAKLVQ 109 (360)
Q Consensus 80 ~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~ 109 (360)
.|.|| +|+|+..|+.++++.|++.|.+++
T Consensus 1 ~~~~~-l~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 1 DGRTP-LHLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred CCCCH-HHHHHHcCCHHHHHHHHHcCCCCC
Confidence 37899 999999999999999999987553
|
Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. |
| >smart00248 ANK ankyrin repeats | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.0055 Score=33.59 Aligned_cols=28 Identities=32% Similarity=0.351 Sum_probs=25.5
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCcc
Q 039483 222 CWWTPIHYAAYHRNYLILKLILKIDRTA 249 (360)
Q Consensus 222 ~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~ 249 (360)
.|.||+|+|+..++.++++.|++.|.++
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~ 28 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKGADI 28 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 4789999999999999999999998765
|
Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. |
| >KOG2505 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.017 Score=54.85 Aligned_cols=61 Identities=21% Similarity=0.078 Sum_probs=48.8
Q ss_pred HHHHHHHhcCccccc------cccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhhh
Q 039483 203 CAVQQLFEGKKSMIK------GIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVH 266 (360)
Q Consensus 203 ~~~~~Ll~~~~~~i~------~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~ 266 (360)
..+++|.+.. ...| ..+..-.|+||+|+..|.-+++.+||+.|+|+ ..+|. .|+||..++.
T Consensus 405 ~~ie~lken~-lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp-~~kd~-~Grtpy~ls~ 471 (591)
T KOG2505|consen 405 DSIEALKENL-LSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDP-STKDG-AGRTPYSLSA 471 (591)
T ss_pred hHHHHHHhcC-CcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCc-hhccc-CCCCcccccc
Confidence 4556666555 3222 22344679999999999999999999999999 99999 9999999886
|
|
| >KOG2505 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.0081 Score=56.94 Aligned_cols=43 Identities=19% Similarity=0.047 Sum_probs=37.6
Q ss_pred CCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhh
Q 039483 81 GDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYN 142 (360)
Q Consensus 81 g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~ 142 (360)
.-|+ ||+|+..|..++|.+|++.|+|+.. +|..|.||...+.|
T Consensus 430 tsT~-LH~aa~qg~~k~v~~~Leeg~Dp~~------------------kd~~Grtpy~ls~n 472 (591)
T KOG2505|consen 430 TSTF-LHYAAAQGARKCVKYFLEEGCDPST------------------KDGAGRTPYSLSAN 472 (591)
T ss_pred cchH-HHHHHhcchHHHHHHHHHhcCCchh------------------cccCCCCccccccc
Confidence 3578 9999999999999999999999988 89999877776643
|
|
| >PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses | Back alignment and domain information |
|---|
Probab=91.39 E-value=1.6 Score=36.58 Aligned_cols=141 Identities=13% Similarity=0.082 Sum_probs=84.8
Q ss_pred CCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHH
Q 039483 24 QIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIE 103 (360)
Q Consensus 24 ~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~ 103 (360)
.+...|..|+..|-..+++++-+. +.. . -..+.+. .-.||+..+.|+|+|+-+
T Consensus 45 ~~~CLl~HAVk~nmL~ILqkyke~-L~~-------------------~------~~~~q~L-FElAC~~qkydiV~WI~q 97 (192)
T PF03158_consen 45 DMWCLLYHAVKYNMLSILQKYKED-LEN-------------------E------RYLNQEL-FELACEEQKYDIVKWIGQ 97 (192)
T ss_pred CHHHHHHHHHHcCcHHHHHHHHHH-hhc-------------------c------hhHHHHH-HHHHHHHccccHHHHHhh
Confidence 455677788888888888877552 100 0 0123456 889999999999999843
Q ss_pred hccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHH----HHHhhCCCCCccccCCC--
Q 039483 104 RAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVV----AILKSCTSVSHIYMKAP-- 177 (360)
Q Consensus 104 ~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~----~Ll~~g~~~~~~~~~d~-- 177 (360)
.=. + .+. .+-+-+|....+ .+... .+.....+-.. .|.
T Consensus 98 nL~-i--------------------~~~-----------~~iFdIA~~~kD-lsLyslGY~l~~~~~~~~~~---~d~~~ 141 (192)
T PF03158_consen 98 NLH-I--------------------YNP-----------EDIFDIAFAKKD-LSLYSLGYKLLFNRMMSEHN---EDPTS 141 (192)
T ss_pred ccC-C--------------------CCc-----------hhhhhhhhhccc-hhHHHHHHHHHHhhcccccc---cCHHH
Confidence 221 1 111 134455555555 44411 11122111101 111
Q ss_pred CCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHh
Q 039483 178 MERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILK 244 (360)
Q Consensus 178 ~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~ 244 (360)
.-..-|.+|+..|-. ..+...+++| .+++ .++|..|+.+++..++.+++.
T Consensus 142 ll~~hl~~a~~kgll----------~F~letlkyg-g~~~------~~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 142 LLTQHLEKAAAKGLL----------PFVLETLKYG-GNVD------IIVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHHHHHHHHCCCH----------HHHHHHHHcC-Cccc------HHHHHHHHHhhHHHHHHHhhc
Confidence 112346789999999 9888888887 3222 279999999999999988863
|
These proteins may be involved in promoting survival of infected macrophages []. |
| >PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain | Back alignment and domain information |
|---|
Probab=88.87 E-value=0.9 Score=32.31 Aligned_cols=45 Identities=11% Similarity=0.092 Sum_probs=37.7
Q ss_pred HHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhh
Q 039483 86 RHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKS 165 (360)
Q Consensus 86 Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~ 165 (360)
+..|+..|+.|+++.+++.+. ++ ...+..|+...+ .+++++|++.
T Consensus 10 l~~Ai~GGN~eII~~c~~~~~-~~---------------------------------~~~l~~AI~~H~-n~i~~~l~~~ 54 (76)
T PF11929_consen 10 LEYAIIGGNFEIINICLKKNK-PD---------------------------------NDCLEYAIKSHN-NEIADWLIEN 54 (76)
T ss_pred HHHHHhCCCHHHHHHHHHHhc-cH---------------------------------HHHHHHHHHHhh-HHHHHHHHHh
Confidence 799999999999999997662 21 156888888888 9999999987
|
These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ]. |
| >PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC | Back alignment and domain information |
|---|
Probab=88.50 E-value=2.8 Score=36.32 Aligned_cols=92 Identities=8% Similarity=0.031 Sum_probs=65.2
Q ss_pred cCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCC----CCCcHHHHHHhc--CCcccccccCChHHHHHHHHhcCcccc
Q 039483 143 KIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAP----MERQALHAATMH--IDLCKFNHTLSNDCAVQQLFEGKKSMI 216 (360)
Q Consensus 143 ~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~----~g~t~Lh~A~~~--~~~~~~~~~~~~~~~~~~Ll~~~~~~i 216 (360)
.+++.++...+. .+++.+|+++- +... .|- .+.--+.|+.+. .+. .+++++++.|-.++
T Consensus 180 ~~Am~~si~~~K-~dva~~lls~f-~ft~---~dv~~~~~~~ydieY~LS~h~a~~----------kvL~~Fi~~Glv~v 244 (284)
T PF06128_consen 180 HQAMWLSIGNAK-EDVALYLLSKF-NFTK---QDVASMEKELYDIEYLLSEHSASY----------KVLEYFINRGLVDV 244 (284)
T ss_pred HHHHHHHhcccH-HHHHHHHHhhc-ceec---chhhhcCcchhhHHHHHhhcCCcH----------HHHHHHHhcccccc
Confidence 478888888887 88898888862 2211 111 122233444332 344 88999999997777
Q ss_pred ccc---cCCCChHHHHHHHcCCHHHHHHHHhcCCcc
Q 039483 217 KGI---DQCWWTPIHYAAYHRNYLILKLILKIDRTA 249 (360)
Q Consensus 217 ~~~---d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~ 249 (360)
|.. -..|.|-|.-|.++++.+++.+||++|+-.
T Consensus 245 N~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~~ 280 (284)
T PF06128_consen 245 NKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAIS 280 (284)
T ss_pred chhhhccCCcchHHHhHHhcCcHHHHHHHHHcCccc
Confidence 754 457899999999999999999999999743
|
The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol []. |
| >PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC | Back alignment and domain information |
|---|
Probab=87.65 E-value=6.2 Score=34.26 Aligned_cols=93 Identities=8% Similarity=0.040 Sum_probs=62.6
Q ss_pred CChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCC----CCchHHHhhhcCHHHHHHhcCCcHH
Q 039483 82 DTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKE----KHTTLHEAYNKIPLCMAAEYEHSSH 157 (360)
Q Consensus 82 ~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~----g~t~Lh~a~~~t~L~~A~~~g~~~~ 157 (360)
.++ +-+|...+..+++-+|+.+--- .. +|.. +..-+-|+ +.....+ ..
T Consensus 180 ~~A-m~~si~~~K~dva~~lls~f~f-t~------------------~dv~~~~~~~ydieY~-------LS~h~a~-~k 231 (284)
T PF06128_consen 180 HQA-MWLSIGNAKEDVALYLLSKFNF-TK------------------QDVASMEKELYDIEYL-------LSEHSAS-YK 231 (284)
T ss_pred HHH-HHHHhcccHHHHHHHHHhhcce-ec------------------chhhhcCcchhhHHHH-------HhhcCCc-HH
Confidence 367 8888888889999999975411 11 1111 11011111 1112234 88
Q ss_pred HHHHHHhhCC-CCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcC
Q 039483 158 TVVAILKSCT-SVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGK 212 (360)
Q Consensus 158 ~~~~Ll~~g~-~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~ 212 (360)
++++++.+|. +++.--.+-..|.|-|.-|.+.++. +++..|+++|
T Consensus 232 vL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~----------emi~~Llk~G 277 (284)
T PF06128_consen 232 VLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNS----------EMIAFLLKYG 277 (284)
T ss_pred HHHHHHhccccccchhhhccCCcchHHHhHHhcCcH----------HHHHHHHHcC
Confidence 9999999993 5554223567899999999999999 9999999998
|
The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol []. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364 | Back alignment and structure |
|---|
Score = 49.5 bits (119), Expect = 6e-07
Identities = 20/186 (10%), Positives = 46/186 (24%), Gaps = 42/186 (22%)
Query: 87 HVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPL 146
A +F + + + ++++ + NK+ ++ LH
Sbjct: 178 MRAMEFRNREALDLMMDTVPSKS----------SLR---LDYANKQGNSHLH-------- 216
Query: 147 CMAAEYEHSSHTVVAILKSCTSVSH---IYMKAPMERQALHAATM--HIDLCKF--NHTL 199
A V V + M+ L+ + + L K T
Sbjct: 217 -WAILINW--EDVAMRF-----VEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTD 268
Query: 200 SNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRK- 258
G + + W + AA +L+L+ + ++
Sbjct: 269 VFLIQACPYHNGTTVLPDRVV--WLDFVPAAADPSKQEVLQLLQEKL---DEVVRSLNTG 323
Query: 259 MTALHL 264
Sbjct: 324 AGGAVK 329
|
| >3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364 | Back alignment and structure |
|---|
Score = 42.5 bits (101), Expect = 1e-04
Identities = 19/202 (9%), Positives = 47/202 (23%), Gaps = 64/202 (31%)
Query: 87 HVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEA------ 140
H+A + D+V L+E A +
Sbjct: 89 HLAVMANKTDLVVALVEGA------------------------KERGQMPESLLNECDER 124
Query: 141 ------------YNKIPLCMAAEYEHSSHTVVAILKSCTSVSH---IYMKAPMERQALHA 185
+ L ++ IL V K + L
Sbjct: 125 EVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKIL-----VQLGASPTAKDKADETPLMR 179
Query: 186 ATM--HIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLIL 243
A + + + + + + ++ + +H+A + +
Sbjct: 180 AMEFRNREALDL---M-----MDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFV 231
Query: 244 KIDRTAAKIADKDRK-MTALHL 264
++ + +D + L+L
Sbjct: 232 EMG---IDVNMEDNEHTVPLYL 250
|
| >3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 2e-04
Identities = 10/86 (11%), Positives = 24/86 (27%), Gaps = 11/86 (12%)
Query: 220 DQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQNNML--A 277
++ T +H A K + + + + +HL N
Sbjct: 50 NRFGCTALHLACKFGCVDTAKYLASVG---EVHSLWHGQ-KPIHLA-----VMANKTDLV 100
Query: 278 SSLMDEGDAKGNTTVHFFAAVHRKEI 303
+L++ +G +E+
Sbjct: 101 VALVEGAKERGQMPESLLNECDEREV 126
|
| >3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 2e-04
Identities = 42/300 (14%), Positives = 76/300 (25%), Gaps = 91/300 (30%)
Query: 87 HVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEA------ 140
HVAA+ D V LIE G S + N+ T LH A
Sbjct: 25 HVAARKGQTDEVRRLIET---------------GVS---PTIQNRFGCTALHLACKFGCV 66
Query: 141 ----------------YNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALH 184
+ + P+ +A +V L V +
Sbjct: 67 DTAKYLASVGEVHSLWHGQKPIHLAVMANK--TDLVVAL-----VEG---AKERGQMPES 116
Query: 185 AATM--HIDLCKFN-HTLSND------CAVQQLFEGKKSM------------IKGIDQCW 223
++ + H V G + + D+
Sbjct: 117 LLNECDEREVNEIGSHVKHCKGQTALHWCVG---LGPEYLEMIKILVQLGASPTAKDKAD 173
Query: 224 WTPIHYAAYHRNYLILKLILKIDRTA--AKIADKDRK-MTALHLVHGPKGCQNNML--AS 278
TP+ A RN L L++ + ++ +++ + LH N A
Sbjct: 174 ETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWA-----ILINWEDVAM 228
Query: 279 SLMDEG------DAKGNTTVHFFAAVHRKEIFDDLSGRVKATMRPSTSKIENGAAILRGN 332
++ G D + ++ + +L + NG +L
Sbjct: 229 RFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQK-TDVFLIQACPYHNGTTVLPDR 287
|
| >1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 4e-06
Identities = 28/207 (13%), Positives = 53/207 (25%), Gaps = 51/207 (24%)
Query: 87 HVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEA------ 140
H+A H + L+ A + + + N T LH A
Sbjct: 14 HLAVIHQHEPFLDFLLGF---------------SAGHEYLDLQNDLGQTALHLAAILGEA 58
Query: 141 ------------------YNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQA 182
L +A HT +L Q+
Sbjct: 59 STVEKLYAAGAGVLVAERGGHTALHLACRVRA--HTCACVLLQPRPSHPRDASDTYLTQS 116
Query: 183 LHAATMHIDLCKFNHTLSNDCA-VQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKL 241
+ N + E + ++ + TP+H A H++ +++L
Sbjct: 117 QDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRL 176
Query: 242 ILK----IDRTAAKIADKDRKMTALHL 264
+ ++ + T LHL
Sbjct: 177 LRDAGADLN-----KPEPTCGRTPLHL 198
|
| >2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 5e-06
Identities = 32/260 (12%), Positives = 64/260 (24%), Gaps = 74/260 (28%)
Query: 87 HVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEA------ 140
+ + ++ + E LH
Sbjct: 66 PQGYGNGNDFLGDFNHTNLQIPTEPE------------------PESPIKLHTEAAGSYA 107
Query: 141 ----------------YNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQ--- 181
+N+ L A L + I A +
Sbjct: 108 ITEPITRESVNIIDPRHNRTVLHWIASNSS--AEKSEDLIVHEAKECIAAGADVNAMDCD 165
Query: 182 ---ALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLI 238
L A + + ++ + +H AA +R++ +
Sbjct: 166 ENTPLMLA------VLARRR-----RLVAYLMKAGADPTIYNKSERSALHQAAANRDFGM 214
Query: 239 LKLILKIDRTAAKIADKDRK-MTALHL--VHGPK------------GCQNNMLASSLMDE 283
+ +L + I + DR MTAL + + + G + + ++ D
Sbjct: 215 MVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDS 274
Query: 284 GDAKGNTTVHFFAAVHRKEI 303
KG T +H+ A V I
Sbjct: 275 EKYKGRTALHYAAQVSNMPI 294
|
| >1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285 | Back alignment and structure |
|---|
Score = 45.9 bits (110), Expect = 7e-06
Identities = 32/184 (17%), Positives = 58/184 (31%), Gaps = 40/184 (21%)
Query: 87 HVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYN-KIP 145
AA + + L +R GA+ + + K K
Sbjct: 110 MEAAVYGKVKALKFLYKR---------------GAN---VNLRRKTKEDQERLRKGGATA 151
Query: 146 LCMAAEYEHSSHTVVAILKSCTSVSH----IYMKAPMERQALHAATMHIDLCKFNHTLSN 201
L AAE H V+ IL + + M R AL A +
Sbjct: 152 LMDAAEKGH--VEVLKIL-----LDEMGADVNACDNMGRNALIHA------LLSSDDSDV 198
Query: 202 DCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRK-MT 260
+ L + + + + TP+ A ++ +++ + +++ +I D D T
Sbjct: 199 EAITHLLLD-HGADVNVRGERGKTPLILAVEKKHLGLVQRL--LEQEHIEINDTDSDGKT 255
Query: 261 ALHL 264
AL L
Sbjct: 256 ALLL 259
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.8 bits (110), Expect = 9e-06
Identities = 54/357 (15%), Positives = 104/357 (29%), Gaps = 94/357 (26%)
Query: 24 QIDPNLFKVAAAGNLEPFK-DMAREVIESLLTARSRTQSCISTSNCRRQKM-------CQ 75
QIDPN + + + + + LL ++ + N + K C+
Sbjct: 208 QIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCK 267
Query: 76 P-VTAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKH 134
+T TR + V D +S + H L + ++ +
Sbjct: 268 ILLT----TRFKQVT------DFLSAATTTHISLDHHSMTLTP--DEVKSLLLKYLDCRP 315
Query: 135 TTL-HEAYNKIPL--CMAAE-----------YEHSSH-TVVAILKSCTSVSHIYMKAPME 179
L E P + AE ++H + + I++S S++ + P E
Sbjct: 316 QDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIES--SLNVLE---PAE 370
Query: 180 RQALHAATMHIDLCKFN-------HTLS--------NDCA--VQQLFEGKKSMIKGIDQC 222
+ M L F LS +D V +L K S+++
Sbjct: 371 YRK-----MFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLH--KYSLVE----K 419
Query: 223 WWTPIHYAAYHRNYLILKLILKIDRTAA---KIADKDRKMTALHLVHGPKGCQNNMLASS 279
+ + L+L +K++ A I D + S
Sbjct: 420 QPKESTISIPS---IYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSH 476
Query: 280 LMDEGDAKGNTTVHFFAAVHRKE------IFDDLSGR-VKATMRPSTSKIENGAAIL 329
+ H H + +F D R ++ +R ++ +IL
Sbjct: 477 IGH----------HLKNIEHPERMTLFRMVFLDF--RFLEQKIRHDSTAWNASGSIL 521
|
| >1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437 | Back alignment and structure |
|---|
Score = 45.9 bits (110), Expect = 1e-05
Identities = 47/253 (18%), Positives = 73/253 (28%), Gaps = 80/253 (31%)
Query: 87 HVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEA------ 140
H+AA+ H ++ L++ A + K+ T LH A
Sbjct: 52 HMAARAGHTEVAKYLLQN---------------KAK---VNAKAKDDQTPLHCAARIGHT 93
Query: 141 ------------------YNKIPLCMAAEYEHSSHTVVAILKSCTSVSH---IYMKAPME 179
PL +AA H V L +
Sbjct: 94 NMVKLLLENNANPNLATTAGHTPLHIAAREGH--VETVLAL-----LEKEASQACMTKKG 146
Query: 180 RQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLIL 239
LH A K+ + L E + + + TP+H A +H N I+
Sbjct: 147 FTPLHVA------AKYGKVR----VAELLLE-RDAHPNAAGKNGLTPLHVAVHHNNLDIV 195
Query: 240 KLILKIDRTAAKIADKDR-KMTALHLVHGPKGCQNNML--ASSLMDEG------DAKGNT 290
KL+L T LH+ + N + A SL+ G +G T
Sbjct: 196 KLLLPRG---GSPHSPAWNGYTPLHIA-----AKQNQVEVARSLLQYGGSANAESVQGVT 247
Query: 291 TVHFFAAVHRKEI 303
+H A E+
Sbjct: 248 PLHLAAQEGHAEM 260
|
| >1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437 | Back alignment and structure |
|---|
Score = 44.8 bits (107), Expect = 3e-05
Identities = 38/236 (16%), Positives = 70/236 (29%), Gaps = 76/236 (32%)
Query: 87 HVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEA------ 140
H+AA+ H ++V++L+ + A+ + NK T LH
Sbjct: 250 HLAAQEGHAEMVALLLSK---------------QAN---GNLGNKSGLTPLHLVAQEGHV 291
Query: 141 ------------------YNKIPLCMAAEYEHSSHTVVAILKSCTSVSH---IYMKAPME 179
PL +A+ Y + +V L + H + K +
Sbjct: 292 PVADVLIKHGVMVDATTRMGYTPLHVASHYGN--IKLVKFL-----LQHQADVNAKTKLG 344
Query: 180 RQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLIL 239
LH A + HT D L + + TP+ A +
Sbjct: 345 YSPLHQA------AQQGHT---DIV--TLLLKNGASPNEVSSDGTTPLAIAKRLGYISVT 393
Query: 240 K-LILKIDRTAAKIADKDRKMTALHLVHGPKGCQNNMLASSLMDEGDAKGNTTVHF 294
L + D T+ + +M+ V ++D + +G + F
Sbjct: 394 DVLKVVTDETSFVLVSDKHRMSFPETVDE------------ILDVSEDEGEELISF 437
|
| >1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437 | Back alignment and structure |
|---|
Score = 42.9 bits (102), Expect = 1e-04
Identities = 42/208 (20%), Positives = 69/208 (33%), Gaps = 71/208 (34%)
Query: 87 HVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEA------ 140
HVA+ H IV L++R GAS ++N + T LH A
Sbjct: 19 HVASFMGHLPIVKNLLQR---------------GAS---PNVSNVKVETPLHMAARAGHT 60
Query: 141 ------------------YNKIPLCMAAEYEHSSHTVVAILKSCTSVSH---IYMKAPME 179
++ PL AA H +V +L + + +
Sbjct: 61 EVAKYLLQNKAKVNAKAKDDQTPLHCAARIGH--TNMVKLL-----LENNANPNLATTAG 113
Query: 180 RQALHAATM--HIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYL 237
LH A H++ L + + KG +TP+H AA +
Sbjct: 114 HTPLHIAAREGHVETVLA--LLEKEASQ------ACMTKKG-----FTPLHVAAKYGKVR 160
Query: 238 ILKLILKIDRTAAKIADKDRK-MTALHL 264
+ +L+L+ D A + +T LH+
Sbjct: 161 VAELLLERD---AHPNAAGKNGLTPLHV 185
|
| >3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 1e-05
Identities = 40/219 (18%), Positives = 73/219 (33%), Gaps = 69/219 (31%)
Query: 87 HVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEA------ 140
H+AA ++ IV +L++ GA + +K LH A
Sbjct: 63 HLAAGYNRVRIVQLLLQH---------------GAD---VHAKDKGGLVPLHNACSYGHY 104
Query: 141 ------------------YNKIPLCMAAEYEHSSHTVVAILKSCTSVSH---IYMKAPME 179
+ PL AA V ++L +SH +
Sbjct: 105 EVTELLLKHGACVNAMDLWQFTPLHEAASKNR--VEVCSLL-----LSHGADPTLVNCHG 157
Query: 180 RQALHAATM--HIDLCKF---NHTLSNDCAVQQLFEGKKSMIKGI-----DQCWWTPIHY 229
+ A+ A + + H+L L + KK++ I Q T +H
Sbjct: 158 KSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHC 217
Query: 230 AA---YHRNYLILKLILKIDRTAAKIADKDRK-MTALHL 264
A + + + +L+L+ A + +K++ MT LH+
Sbjct: 218 AVASLHPKRKQVAELLLRKG---ANVNEKNKDFMTPLHV 253
|
| >2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228 | Back alignment and structure |
|---|
Score = 44.0 bits (105), Expect = 2e-05
Identities = 32/230 (13%), Positives = 63/230 (27%), Gaps = 58/230 (25%)
Query: 87 HVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPL 146
H + F +I S L+ + + + + T H
Sbjct: 41 HWSVSFQAHEITSFLLSK---------------MENVNLDDYPDDSGWTPFH-------- 77
Query: 147 CMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATM--HIDLCKFNHTLSNDCA 204
+A + VV L + LH A ++ +F + N +
Sbjct: 78 -IACSVGN--LEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQF--LIENGAS 132
Query: 205 VQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRK-MTALH 263
++ D+ P+H AA + +++L+ + + +D++ T L
Sbjct: 133 -----------VRIKDKFNQIPLHRAASVGSLKLIELL--CGLGKSAVNWQDKQGWTPLF 179
Query: 264 LVHGPKGCQNN------MLASSL---MDEGDAKGNTTVHFFAAVHRKEIF 304
+L D D KG K+ F
Sbjct: 180 HA-----LAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNEQVKKFF 224
|
| >3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285 | Back alignment and structure |
|---|
Score = 44.4 bits (106), Expect = 3e-05
Identities = 31/184 (16%), Positives = 63/184 (34%), Gaps = 28/184 (15%)
Query: 88 VAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEK---HTTLHEAYNKI 144
+ + H S L+ R + D + G+ R + + + +A +
Sbjct: 1 MGSSHHHHHHSSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDW 60
Query: 145 -PLCMAAEYEHSSHTVVAILKSCTSVSH---IYMKAPMERQALHAATMHIDLCKFNHTLS 200
P+ AA + H + L +S + + LH A C H
Sbjct: 61 SPMHEAAIHGHQL--SLRNL-----ISQGWAVNIITADHVSPLHEA------CLGGHL-- 105
Query: 201 NDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMT 260
C V+ L + + + G+ W TP+ A ++ + L+L+ A + + +
Sbjct: 106 -SC-VKILLK-HGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHG---ASVQPESDLAS 159
Query: 261 ALHL 264
+H
Sbjct: 160 PIHE 163
|
| >3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 1e-04
Identities = 43/255 (16%), Positives = 71/255 (27%), Gaps = 87/255 (34%)
Query: 87 HVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEA------ 140
H AA H + LI + G + + + + + LHEA
Sbjct: 64 HEAAIHGHQLSLRNLISQ---------------GWA---VNIITADHVSPLHEACLGGHL 105
Query: 141 ------------------YNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQ- 181
PL A V +L + H A ++ +
Sbjct: 106 SCVKILLKHGAQVNGVTADWHTPLFNACVSGS--WDCVNLL-----LQH---GASVQPES 155
Query: 182 ----ALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYL 237
+H A + H +C V L I TP++ A ++
Sbjct: 156 DLASPIHEA------ARRGHV---EC-VNSLIA-YGGNIDHKISHLGTPLYLACENQQRA 204
Query: 238 ILKLILKIDRTAAKI-ADKDRKMTALHLVHGPKGCQNNML--ASSLMDEG------DAKG 288
+K +L+ A + K + + LH V + A LMD G +A+G
Sbjct: 205 CVKKLLESG---ADVNQGKGQD-SPLHAV-----VRTASEELACLLMDFGADTQAKNAEG 255
Query: 289 NTTVHFFAAVHRKEI 303
V
Sbjct: 256 KRPVE-LVPPESPLA 269
|
| >3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231 | Back alignment and structure |
|---|
Score = 43.7 bits (103), Expect = 3e-05
Identities = 39/228 (17%), Positives = 69/228 (30%), Gaps = 55/228 (24%)
Query: 87 HVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPL 146
++A ++ ++ + T+++ T LH
Sbjct: 12 NLAYSGKLDELKERILAD---------------KSL---ATRTDQDSRTALH-------- 45
Query: 147 CMAAEYEHSSHTVVAILKSCTSVSH---IYMKAPMERQALHAATMHIDLCKFNHTLSNDC 203
A H +V L + + K LH A
Sbjct: 46 -WACSAGH--TEIVEFL-----LQLGVPVNDKDDAGWSPLHIAASA-----------GXD 86
Query: 204 AVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRK-MTAL 262
+ + K + + ++Q TP+HYAA + I ++L+ A KD TA+
Sbjct: 87 EIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLE---GGANPDAKDHYDATAM 143
Query: 263 HLV--HGPKGCQNNMLASSL-MDEGDAKGNTTVHFFAAVHRKEIFDDL 307
H G + +L + D +GNT +H R E L
Sbjct: 144 HRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFL 191
|
| >2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 3e-05
Identities = 30/194 (15%), Positives = 58/194 (29%), Gaps = 50/194 (25%)
Query: 87 HVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEA-----Y 141
H+A + + +V++L+E GA ++ + +
Sbjct: 106 HIAIERRNMTLVTLLVEN---------------GAD---VQAAANGDFFKKTKGRPGFYF 147
Query: 142 NKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQ------ALHAATMHIDLCKF 195
++PL +AA + +V L + + + A + + LHA D
Sbjct: 148 GELPLSLAACTNQLA--IVKFL-----LQNSWQPADISARDSVGNTVLHALVEVADNTVD 200
Query: 196 NHTLSNDCAVQQLFEGKKSMIKGIDQCW-----WTPIHYAAYHRNYLILKLILKIDRTAA 250
N + L G K + TP+ AA +L IL+
Sbjct: 201 NTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQ------ 254
Query: 251 KIADKDRKMTALHL 264
+ + H
Sbjct: 255 --REIH-EPECRHA 265
|
| >3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240 | Back alignment and structure |
|---|
Score = 43.6 bits (104), Expect = 4e-05
Identities = 41/209 (19%), Positives = 65/209 (31%), Gaps = 70/209 (33%)
Query: 87 HVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEA------ 140
A ++ + L+E G +R +KE T LH A
Sbjct: 14 VKATQYGIYERCRELVEA---------------GYD---VRQPDKENVTLLHWAAINNRI 55
Query: 141 -------------------YNKIPLCMAAEYEHSSHTVVAILKSCTSVSH---IYMKAPM 178
N PL A H S +V L + + +
Sbjct: 56 DLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLS--MVVQL-----MKYGADPSLIDGE 108
Query: 179 ERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYL- 237
+H A +F HT ++ K + +DQ TP+ +AAY + +
Sbjct: 109 GCSCIHLA------AQFGHT-----SIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVD 157
Query: 238 ILKLILKIDRTAAKI--ADKDRKMTALHL 264
+L+L + + DK K TALH
Sbjct: 158 PTRLLLTFN---VSVNLGDKYHKNTALHW 183
|
| >1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 1e-04
Identities = 38/233 (16%), Positives = 69/233 (29%), Gaps = 64/233 (27%)
Query: 87 HVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPL 146
H+A + V L+ Q G + + N + T LH
Sbjct: 14 HIAVVQGNLPAVHRLVNL--FQQG---------GRE---LDIYNNLRQTPLH-------- 51
Query: 147 CMAAEYEHSSHTVVAILKSCTSVSH---IYMKAPMERQALHAATMHIDLCKFNHTLSNDC 203
+A +VV +L V+ + A H A C+ C
Sbjct: 52 -LAVITTL--PSVVRLL-----VTAGASPMALDRHGQTAAHLA------CEHRSP---TC 94
Query: 204 AVQQLFE---GKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRK-- 258
++ L + ++ + T +H A ++L+L+ A I D K
Sbjct: 95 -LRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERG---ADIDAVDIKSG 150
Query: 259 MTALHLVHGPKGCQNNML--ASSLMDEG------DAKGNTTVHFFAAVHRKEI 303
+ L +NN L L+ G G++ +H + +
Sbjct: 151 RSPLIHA-----VENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPL 198
|
| >3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 2e-04
Identities = 29/171 (16%), Positives = 56/171 (32%), Gaps = 35/171 (20%)
Query: 87 HVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGAS--RQMIRMTNKEKHTTLHEAYNKI 144
H+A + V +L+E+ GA Q + K + + ++
Sbjct: 98 HIAIERRCKHYVELLVEK---------------GADVHAQARGRFFQPKDEGGYFYFGEL 142
Query: 145 PLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQ------ALHAATMHIDLCKFNHT 198
PL +AA +V L + + +A + RQ LHA D + N
Sbjct: 143 PLSLAACTNQPH--IVHYL-----TENGHKQADLRRQDSRGNTVLHALVAIADNTRENTK 195
Query: 199 LSNDCAVQQLFEG-----KKSMIKGIDQCWWTPIHYAAYHRNYLILKLILK 244
L + ++ ++ +P+ AA I + I++
Sbjct: 196 FVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIR 246
|
| >2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 2e-04
Identities = 34/189 (17%), Positives = 58/189 (30%), Gaps = 53/189 (28%)
Query: 87 HVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEA----YN 142
H+A + V +L+E GA + + + H+ +
Sbjct: 95 HIAIEKRSLQCVKLLVEN---------------GAD---VHLRACGRFFQKHQGTCFYFG 136
Query: 143 KIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQ------ALHAATMHIDLCKFN 196
++PL +AA + VV L + + + A +E LHA M D N
Sbjct: 137 ELPLSLAACTKQWD--VVTYL-----LENPHQPASLEATDSLGNTVLHALVMIADNSPEN 189
Query: 197 HTLSNDCAVQQLFEGKKSMIKGIDQCW----------WTPIHYAAYHRNYLILKLILKID 246
L ++G M + TP+ AA I + IL+ +
Sbjct: 190 SALVIHM-----YDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQRE 244
Query: 247 RTAAKIADK 255
A
Sbjct: 245 ---FSGAAA 250
|
| >3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237 | Back alignment and structure |
|---|
Score = 40.5 bits (96), Expect = 3e-04
Identities = 39/182 (21%), Positives = 64/182 (35%), Gaps = 51/182 (28%)
Query: 87 HVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPL 146
H AA+ H DI +L++ GA+ I ++++ T L
Sbjct: 16 HAAAEAGHVDICHMLVQA---------------GAN---IDTCSEDQRTPLM-------- 49
Query: 147 CMAAEYEHSSHTVVAILKSCTSVSH---IYMKAPMERQALHAATMHIDLCKFNHTLSNDC 203
AAE H V L + + K LH A K H +
Sbjct: 50 -EAAENNH--LEAVKYL-----IKAGALVDPKDAEGSTCLHLA------AKKGHY---EV 92
Query: 204 AVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRK-MTAL 262
VQ L + + D WTP+ +A +++ ++KL+L + I +D + L
Sbjct: 93 -VQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKG---SDINIRDNEENICL 148
Query: 263 HL 264
H
Sbjct: 149 HW 150
|
| >1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299 | Back alignment and structure |
|---|
Score = 40.9 bits (97), Expect = 4e-04
Identities = 33/203 (16%), Positives = 53/203 (26%), Gaps = 67/203 (33%)
Query: 87 HVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEA------ 140
H A D+ D+V L+E GA+ I + E LH A
Sbjct: 78 HQACIDDNVDMVKFLVEN---------------GAN---INQPDNEGWIPLHAAASCGYL 119
Query: 141 ------------------YNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQA 182
PL +A E ++ + RQ
Sbjct: 120 DIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEE--LLQNE--------------VNRQG 163
Query: 183 LHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLI 242
+ + + +Q + T +H AA +LKL+
Sbjct: 164 VDIEAARKEEERIMLR-----DARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLL 218
Query: 243 LKIDRTAAKIADKDRK-MTALHL 264
++ + KD T LH
Sbjct: 219 IQAR---YDVNIKDYDGWTPLHA 238
|
| >1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327 | Back alignment and structure |
|---|
Score = 40.8 bits (95), Expect = 4e-04
Identities = 24/211 (11%), Positives = 57/211 (27%), Gaps = 57/211 (27%)
Query: 87 HVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEA------ 140
H + ++V L++ G++ + + L +A
Sbjct: 136 HWLTSIANLELVKHLVKH---------------GSN---RLYGDNMGESCLVKAVKSVNN 177
Query: 141 YNKIPLCMAAEYEHSS------------HTVV--AILKSCTSVSHIYMKAPMERQALHAA 186
Y+ +Y + H ++ + + C++ + Y+ M
Sbjct: 178 YDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQN 237
Query: 187 TMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGI---------DQCWWTPIHYAAYHRNYL 237
+ ND ++ +++ D T ++ AA N
Sbjct: 238 RPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNIS 297
Query: 238 ILKLILK----IDRTAAKIADKDRKMTALHL 264
I+ +L IA+K +
Sbjct: 298 IVDALLDYGADPF-----IANKSGL-RPVDF 322
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 360 | |||
| 1n11_A | 437 | Ankyrin; clathrin, BAND 3, anion exchanger, struct | 100.0 | |
| 1yyh_A | 253 | HN1;, notch 1, ankyrin domain; ankyrin repeats, ce | 100.0 | |
| 1wdy_A | 285 | 2-5A-dependent ribonuclease; hydrolase, RNA-bindin | 100.0 | |
| 1n11_A | 437 | Ankyrin; clathrin, BAND 3, anion exchanger, struct | 100.0 | |
| 4g8k_A | 337 | 2-5A-dependent ribonuclease; ankyrin-repeat domain | 100.0 | |
| 1k1a_A | 241 | B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa | 100.0 | |
| 3aji_A | 231 | 26S proteasome non-ATPase regulatory subunit 10; g | 100.0 | |
| 3b7b_A | 237 | Euchromatic histone-lysine N-methyltransferase 1; | 100.0 | |
| 2xai_A | 261 | ASB-9, ankyrin repeat and SOCS box protein 9; tran | 100.0 | |
| 3d9h_A | 285 | CDNA FLJ77766, highly similar to HOMO sapiens anky | 100.0 | |
| 1oy3_D | 282 | Transcription factor inhibitor I-kappa-B-beta; pro | 100.0 | |
| 2dzn_A | 228 | Probable 26S proteasome regulatory subunit P28; an | 100.0 | |
| 4b93_B | 269 | Ankyrin repeat domain-containing protein 27; endoc | 100.0 | |
| 3ljn_A | 364 | Hypothetical protein; ankyrin, structural genomics | 100.0 | |
| 2fo1_E | 373 | LIN-12 protein; beta-barrel, protein-DNA complex, | 100.0 | |
| 3utm_A | 351 | Tankyrase-1; tankyrase, TNKS, ankryin repeat clust | 100.0 | |
| 3eu9_A | 240 | Huntingtin-interacting protein 14; epigenetics, an | 100.0 | |
| 1s70_B | 299 | 130 kDa myosin-binding subunit of smooth muscle my | 100.0 | |
| 2f8y_A | 223 | Notch homolog 1, translocation-associated (drosoph | 100.0 | |
| 3utm_A | 351 | Tankyrase-1; tankyrase, TNKS, ankryin repeat clust | 100.0 | |
| 1oy3_D | 282 | Transcription factor inhibitor I-kappa-B-beta; pro | 100.0 | |
| 3d9h_A | 285 | CDNA FLJ77766, highly similar to HOMO sapiens anky | 100.0 | |
| 4g8k_A | 337 | 2-5A-dependent ribonuclease; ankyrin-repeat domain | 100.0 | |
| 3b7b_A | 237 | Euchromatic histone-lysine N-methyltransferase 1; | 100.0 | |
| 2rfa_A | 232 | Transient receptor potential cation channel subfa | 100.0 | |
| 1wdy_A | 285 | 2-5A-dependent ribonuclease; hydrolase, RNA-bindin | 100.0 | |
| 1yyh_A | 253 | HN1;, notch 1, ankyrin domain; ankyrin repeats, ce | 100.0 | |
| 1k1a_A | 241 | B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa | 100.0 | |
| 2fo1_E | 373 | LIN-12 protein; beta-barrel, protein-DNA complex, | 100.0 | |
| 3kea_A | 285 | K1L; tropism, ANK repeat, viral protein; 2.30A {Va | 100.0 | |
| 1ikn_D | 236 | Protein (I-kappa-B-alpha), protein (NF-kappa-B P50 | 100.0 | |
| 3kea_A | 285 | K1L; tropism, ANK repeat, viral protein; 2.30A {Va | 100.0 | |
| 3hra_A | 201 | Ankyrin repeat family protein; structural protein; | 100.0 | |
| 2xai_A | 261 | ASB-9, ankyrin repeat and SOCS box protein 9; tran | 100.0 | |
| 4gpm_A | 169 | Engineered protein OR264; de novo protein, structu | 99.98 | |
| 2f8y_A | 223 | Notch homolog 1, translocation-associated (drosoph | 99.98 | |
| 3hra_A | 201 | Ankyrin repeat family protein; structural protein; | 99.98 | |
| 2rfa_A | 232 | Transient receptor potential cation channel subfa | 99.98 | |
| 4b93_B | 269 | Ankyrin repeat domain-containing protein 27; endoc | 99.98 | |
| 2etb_A | 256 | Transient receptor potential cation channel subfam | 99.98 | |
| 3aji_A | 231 | 26S proteasome non-ATPase regulatory subunit 10; g | 99.98 | |
| 2dzn_A | 228 | Probable 26S proteasome regulatory subunit P28; an | 99.97 | |
| 1ikn_D | 236 | Protein (I-kappa-B-alpha), protein (NF-kappa-B P50 | 99.97 | |
| 2pnn_A | 273 | Transient receptor potential cation channel subfa | 99.97 | |
| 3ljn_A | 364 | Hypothetical protein; ankyrin, structural genomics | 99.97 | |
| 3jxi_A | 260 | Vanilloid receptor-related osmotically activated p | 99.97 | |
| 1s70_B | 299 | 130 kDa myosin-binding subunit of smooth muscle my | 99.97 | |
| 4gpm_A | 169 | Engineered protein OR264; de novo protein, structu | 99.97 | |
| 3eu9_A | 240 | Huntingtin-interacting protein 14; epigenetics, an | 99.97 | |
| 2pnn_A | 273 | Transient receptor potential cation channel subfa | 99.97 | |
| 1sw6_A | 327 | Regulatory protein SWI6; transcription regulation, | 99.96 | |
| 3v30_A | 172 | DNA-binding protein rfxank; structural genomics co | 99.96 | |
| 4hbd_A | 276 | KN motif and ankyrin repeat domain-containing Pro; | 99.96 | |
| 1ihb_A | 162 | P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit | 99.96 | |
| 2vge_A | 229 | RELA-associated inhibitor; iaspp, nucleus, apoptos | 99.96 | |
| 2rfm_A | 192 | Putative ankyrin repeat protein TV1425; ANK repeat | 99.96 | |
| 1sw6_A | 327 | Regulatory protein SWI6; transcription regulation, | 99.96 | |
| 4hbd_A | 276 | KN motif and ankyrin repeat domain-containing Pro; | 99.96 | |
| 3v30_A | 172 | DNA-binding protein rfxank; structural genomics co | 99.96 | |
| 2y1l_E | 169 | Darpin-8.4; hydrolase-inhibitor complex, DEVD darp | 99.96 | |
| 3v31_A | 167 | Ankyrin repeat family A protein 2; structural geno | 99.96 | |
| 2rfm_A | 192 | Putative ankyrin repeat protein TV1425; ANK repeat | 99.95 | |
| 3v31_A | 167 | Ankyrin repeat family A protein 2; structural geno | 99.95 | |
| 2y1l_E | 169 | Darpin-8.4; hydrolase-inhibitor complex, DEVD darp | 99.95 | |
| 3f6q_A | 179 | Integrin-linked protein kinase; ILK, integrin-link | 99.95 | |
| 1bd8_A | 156 | P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr | 99.95 | |
| 3twr_A | 165 | Tankyrase-2; ankyrin repeat, protein-protein inter | 99.95 | |
| 1awc_B | 153 | Protein (GA binding protein beta 1); complex (tran | 99.95 | |
| 2vge_A | 229 | RELA-associated inhibitor; iaspp, nucleus, apoptos | 99.95 | |
| 1awc_B | 153 | Protein (GA binding protein beta 1); complex (tran | 99.95 | |
| 1ihb_A | 162 | P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit | 99.94 | |
| 3f6q_A | 179 | Integrin-linked protein kinase; ILK, integrin-link | 99.94 | |
| 2etb_A | 256 | Transient receptor potential cation channel subfam | 99.94 | |
| 1ycs_B | 239 | 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres | 99.94 | |
| 3jxi_A | 260 | Vanilloid receptor-related osmotically activated p | 99.94 | |
| 3twr_A | 165 | Tankyrase-2; ankyrin repeat, protein-protein inter | 99.94 | |
| 1bd8_A | 156 | P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr | 99.94 | |
| 1ycs_B | 239 | 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres | 99.93 | |
| 1d9s_A | 136 | Cyclin-dependent kinase 4 inhibitor B; helix-turn- | 99.93 | |
| 1bi7_B | 156 | P16INK4A, MTS1, multiple tumor suppressor; cyclin | 99.93 | |
| 3t8k_A | 186 | Uncharacterized protein; structural genomics, PSI- | 99.92 | |
| 3t8k_A | 186 | Uncharacterized protein; structural genomics, PSI- | 99.91 | |
| 1n0r_A | 126 | 4ANK, 4 ankyrin repeats; structural protein; 1.50A | 99.91 | |
| 2aja_A | 376 | Ankyrin repeat family protein; NESG, Q5ZSV0, struc | 99.91 | |
| 2jab_A | 136 | H10-2-G3; HER2, darpin, ankyrin repeat protein, me | 99.9 | |
| 1bi7_B | 156 | P16INK4A, MTS1, multiple tumor suppressor; cyclin | 99.89 | |
| 3deo_A | 183 | Signal recognition particle 43 kDa protein; chloro | 99.88 | |
| 1d9s_A | 136 | Cyclin-dependent kinase 4 inhibitor B; helix-turn- | 99.88 | |
| 2jab_A | 136 | H10-2-G3; HER2, darpin, ankyrin repeat protein, me | 99.88 | |
| 3ui2_A | 244 | Signal recognition particle 43 kDa protein, chlor; | 99.88 | |
| 3c5r_A | 137 | BARD-1, BRCA1-associated ring domain protein 1; an | 99.87 | |
| 3c5r_A | 137 | BARD-1, BRCA1-associated ring domain protein 1; an | 99.87 | |
| 3ui2_A | 244 | Signal recognition particle 43 kDa protein, chlor; | 99.86 | |
| 1n0r_A | 126 | 4ANK, 4 ankyrin repeats; structural protein; 1.50A | 99.86 | |
| 3deo_A | 183 | Signal recognition particle 43 kDa protein; chloro | 99.86 | |
| 3ehr_A | 222 | Osteoclast-stimulating factor 1; beta barrel, heli | 99.86 | |
| 2b0o_E | 301 | UPLC1; arfgap, structural genomics, structural gen | 99.86 | |
| 3aaa_C | 123 | Myotrophin, protein V-1; actin capping protein, ba | 99.86 | |
| 2b0o_E | 301 | UPLC1; arfgap, structural genomics, structural gen | 99.85 | |
| 3aaa_C | 123 | Myotrophin, protein V-1; actin capping protein, ba | 99.85 | |
| 2aja_A | 376 | Ankyrin repeat family protein; NESG, Q5ZSV0, struc | 99.85 | |
| 3ehr_A | 222 | Osteoclast-stimulating factor 1; beta barrel, heli | 99.84 | |
| 3lvq_E | 497 | ARF-GAP with SH3 domain, ANK repeat and PH domain | 99.82 | |
| 3jue_A | 368 | Arfgap with coiled-coil, ANK repeat and PH domain | 99.82 | |
| 1dcq_A | 278 | PYK2-associated protein beta; zinc-binding module, | 99.81 | |
| 3lvq_E | 497 | ARF-GAP with SH3 domain, ANK repeat and PH domain | 99.8 | |
| 3jue_A | 368 | Arfgap with coiled-coil, ANK repeat and PH domain | 99.79 | |
| 1dcq_A | 278 | PYK2-associated protein beta; zinc-binding module, | 99.79 | |
| 1n0q_A | 93 | 3ANK, 3 ankyrin repeats; structural protein; 1.26A | 99.79 | |
| 1n0q_A | 93 | 3ANK, 3 ankyrin repeats; structural protein; 1.26A | 99.78 | |
| 2l6b_A | 115 | NR1C; ankyrin, consensus, repeat protein, ising mo | 99.78 | |
| 2l6b_A | 115 | NR1C; ankyrin, consensus, repeat protein, ising mo | 99.77 | |
| 2zgd_A | 110 | 3 repeat synthetic ankyrin; ankyrin repeat, hydrox | 99.67 | |
| 2zgd_A | 110 | 3 repeat synthetic ankyrin; ankyrin repeat, hydrox | 99.63 |
| >1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-38 Score=302.19 Aligned_cols=269 Identities=16% Similarity=0.140 Sum_probs=181.8
Q ss_pred CCCCHHHHHHHHcCChHHHHHHHHHHHhhh-hcccCCc----------ccccc-ccccccccccCCCCCCCCChHHHHHH
Q 039483 23 PQIDPNLFKVAAAGNLEPFKDMAREVIESL-LTARSRT----------QSCIS-TSNCRRQKMCQPVTAKGDTRSRHVAA 90 (360)
Q Consensus 23 ~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~-~~~~~~t----------~~~v~-l~~~~~~~~~~~~~~~g~tp~Lh~A~ 90 (360)
..+.||||.||..|+.++++.|++...+.. .+..+.| .++++ |.+. +..+ +.+|..|.|| ||+|+
T Consensus 12 ~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~-~~~~~~g~t~-L~~A~ 88 (437)
T 1n11_A 12 ESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQN-KAKV-NAKAKDDQTP-LHCAA 88 (437)
T ss_dssp ---CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHH-TCCS-SCCCTTSCCH-HHHHH
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhC-CCCC-CCCCCCCCCH-HHHHH
Confidence 345566666666666666666666322111 1222333 45555 5555 5666 6666666666 66666
Q ss_pred hcCCHHHHHHHHHhccccCcccccccccchh------------------------------------------hHHH---
Q 039483 91 KFDHCDIVSVLIERAKLVQHEDEELESGVGA------------------------------------------SRQM--- 125 (360)
Q Consensus 91 ~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~------------------------------------------~~~~--- 125 (360)
..|+.+++++|+++|++++..+..+.++.+. .+.+
T Consensus 89 ~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 168 (437)
T 1n11_A 89 RIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLER 168 (437)
T ss_dssp HHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhC
Confidence 6666666666666666666555555544221 1112
Q ss_pred ---hhcccCCCCchHHHhh-h-----------------------cCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCC
Q 039483 126 ---IRMTNKEKHTTLHEAY-N-----------------------KIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPM 178 (360)
Q Consensus 126 ---l~~~d~~g~t~Lh~a~-~-----------------------~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~ 178 (360)
++..+..|.||||+|+ + .||||+|+..|+ .+++++|++.|++++. ++..
T Consensus 169 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~-~~~~~~Ll~~g~~~~~---~~~~ 244 (437)
T 1n11_A 169 DAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQ-VEVARSLLQYGGSANA---ESVQ 244 (437)
T ss_dssp TCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTC-HHHHHHHHHTTCCTTC---CCTT
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCC-HHHHHHHHHcCCCCCC---CCCC
Confidence 2344555666666665 1 577777777777 7777777777777776 7777
Q ss_pred CCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCC
Q 039483 179 ERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRK 258 (360)
Q Consensus 179 g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g 258 (360)
|.||||+|+..|+. +++++|++.+ .+++..+..|+||||+|+..|+.+++++|+++|+++ +.++. .|
T Consensus 245 g~t~L~~A~~~g~~----------~~v~~Ll~~~-~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~-~g 311 (437)
T 1n11_A 245 GVTPLHLAAQEGHA----------EMVALLLSKQ-ANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMV-DATTR-MG 311 (437)
T ss_dssp CCCHHHHHHHTTCH----------HHHHHHHTTT-CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCS-SC
T ss_pred CCCHHHHHHHCCCH----------HHHHHHHhcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccC-CCCCC-CC
Confidence 77777777777777 8888888777 667777788888888888888888888888888888 78887 88
Q ss_pred CchhhhhhcCCccc-cccccc--ccCccCCCCCCcHHHHHHHcCCHHHHHHHhhhh
Q 039483 259 MTALHLVHGPKGCQ-NNMLAS--SLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGRV 311 (360)
Q Consensus 259 ~tpLh~A~~~~~~~-~~~L~~--~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~~ 311 (360)
+||||+|+..++.+ +++|+. ++++.+|..|+||||+|++.|+.++++.|++..
T Consensus 312 ~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g 367 (437)
T 1n11_A 312 YTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNG 367 (437)
T ss_dssp CCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCc
Confidence 88888888888877 777773 778888888888888888888888888887763
|
| >1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-38 Score=282.67 Aligned_cols=227 Identities=15% Similarity=0.159 Sum_probs=178.9
Q ss_pred CCCCCHHHHHHHHcC-------------ChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHH
Q 039483 22 QPQIDPNLFKVAAAG-------------NLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHV 88 (360)
Q Consensus 22 ~~~~~~~L~~Aa~~G-------------~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~ 88 (360)
...+.||||.|+..| +.++++.|++. +..+....|..|.|| ||+
T Consensus 7 d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~----------------------g~~~~~~~d~~g~t~-L~~ 63 (253)
T 1yyh_A 7 GPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQ----------------------GASLHNQTDRTGETA-LHL 63 (253)
T ss_dssp -------------------------------------------------------------------CCCTTSCCH-HHH
T ss_pred CCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHc----------------------cCCcccccCCCCCcH-HHH
Confidence 456789999999988 77888887774 233315568899999 999
Q ss_pred HHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCC-
Q 039483 89 AAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCT- 167 (360)
Q Consensus 89 A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~- 167 (360)
|+..|+.+++++|+++|++++. .|..|. ||||+|+..|+ .+++++|++.+.
T Consensus 64 A~~~g~~~~v~~Ll~~g~~~~~------------------~~~~g~---------t~L~~A~~~~~-~~~v~~Ll~~~~~ 115 (253)
T 1yyh_A 64 AARYSRSDAAKRLLEASADANI------------------QDNMGR---------TPLHAAVSADA-QGVFQILIRNRAT 115 (253)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTC------------------CCTTSC---------CHHHHHHHHTC-HHHHHHHHHSTTS
T ss_pred HHHcCCHHHHHHHHHcCCCCCC------------------CCCCCC---------CHHHHHHHcCC-HHHHHHHHHcCCC
Confidence 9999999999999999999988 778875 78888889999 999999999987
Q ss_pred CCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCC
Q 039483 168 SVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDR 247 (360)
Q Consensus 168 ~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~ 247 (360)
+++. ++..|.||||+|+..++. +++++|++.+ .+++..|..|+||||+|+..|+.+++++|+++|+
T Consensus 116 ~~~~---~~~~g~t~L~~A~~~~~~----------~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga 181 (253)
T 1yyh_A 116 DLDA---RMHDGTTPLILAARLAVE----------GMLEDLINSH-ADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGA 181 (253)
T ss_dssp CTTC---CCTTCCCHHHHHHHHTCS----------SHHHHHHHTT-CCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTC
T ss_pred Cccc---cCCCCCcHHHHHHHcChH----------HHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 7888 899999999999999999 9999999998 8899999999999999999999999999999999
Q ss_pred ccccccccCCCCchhhhhhcCCccc-cccccc--ccCccCCCCCCcHHHHHHHcCCHHHHHHHhhhhcccc
Q 039483 248 TAAKIADKDRKMTALHLVHGPKGCQ-NNMLAS--SLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGRVKATM 315 (360)
Q Consensus 248 ~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~~--~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~~~~~~ 315 (360)
++ +.+|. .|.||||+|+..++.+ +++|+. ++++.+|..|+||+|+|+++|+.++++.|....++..
T Consensus 182 ~~-~~~~~-~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~~~~~ 250 (253)
T 1yyh_A 182 NK-DMQNN-REETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDLEHHHHH 250 (253)
T ss_dssp CT-TCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC------
T ss_pred CC-CCcCC-CCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHHHHHHHHhhhcc
Confidence 99 99999 9999999999999999 888884 8999999999999999999999999999988765443
|
| >1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-37 Score=277.99 Aligned_cols=229 Identities=17% Similarity=0.139 Sum_probs=202.7
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCC-CCCCCChHHHHHHhcCCHHHHHHHHH
Q 039483 25 IDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPV-TAKGDTRSRHVAAKFDHCDIVSVLIE 103 (360)
Q Consensus 25 ~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~-~~~g~tp~Lh~A~~~g~~~~v~~Ll~ 103 (360)
+.++||.|++.|+++.++.|++. +..+ +.. +..|.|| ||+|+..|+.+++++|++
T Consensus 5 g~~~L~~A~~~g~~~~v~~Ll~~----------------------g~~~-~~~~~~~g~t~-L~~A~~~g~~~~v~~Ll~ 60 (285)
T 1wdy_A 5 DNHLLIKAVQNEDVDLVQQLLEG----------------------GANV-NFQEEEGGWTP-LHNAVQMSREDIVELLLR 60 (285)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHT----------------------TCCT-TCCCTTTCCCH-HHHHHHTTCHHHHHHHHH
T ss_pred cchHHHHHHHcCCHHHHHHHHHc----------------------CCCc-ccccCCCCCcH-HHHHHHcCCHHHHHHHHH
Confidence 45899999999999999999984 3334 434 6667788 888888888888888888
Q ss_pred hccccCcccccccccchhhHHHhhcccCCCCchHHHhh-h-----------------------cCHHHHHHhcCCcHHHH
Q 039483 104 RAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAY-N-----------------------KIPLCMAAEYEHSSHTV 159 (360)
Q Consensus 104 ~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~-~-----------------------~t~L~~A~~~g~~~~~~ 159 (360)
+|++++. .|..|.||||+|+ + .||||+|+..|+ .+++
T Consensus 61 ~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~-~~~~ 121 (285)
T 1wdy_A 61 HGADPVL------------------RKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGK-VKAL 121 (285)
T ss_dssp TTCCTTC------------------CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTC-HHHH
T ss_pred cCCCCcc------------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCC-HHHH
Confidence 8877776 6777777777777 1 699999999999 9999
Q ss_pred HHHHhhCCCCCccccC----------CCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHH
Q 039483 160 VAILKSCTSVSHIYMK----------APMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHY 229 (360)
Q Consensus 160 ~~Ll~~g~~~~~~~~~----------d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~ 229 (360)
++|+++|++++. . +..|.||||+|+..|+. +++++|++..+.+++..|..|+||||+
T Consensus 122 ~~Ll~~g~~~~~---~~~~~~~~~~~~~~g~t~L~~A~~~~~~----------~~v~~Ll~~~~~~~~~~~~~g~t~l~~ 188 (285)
T 1wdy_A 122 KFLYKRGANVNL---RRKTKEDQERLRKGGATALMDAAEKGHV----------EVLKILLDEMGADVNACDNMGRNALIH 188 (285)
T ss_dssp HHHHHTTCCTTC---CCCCCHHHHHTTCCCCCHHHHHHHHTCH----------HHHHHHHHTSCCCTTCCCTTSCCHHHH
T ss_pred HHHHHhCCCccc---ccccHHHHHhhccCCCcHHHHHHHcCCH----------HHHHHHHHhcCCCCCccCCCCCCHHHH
Confidence 999999999887 5 77899999999999999 999999998448899999999999999
Q ss_pred HHHcCC----HHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-cccccc---ccCccCCCCCCcHHHHHHHcCCH
Q 039483 230 AAYHRN----YLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLAS---SLMDEGDAKGNTTVHFFAAVHRK 301 (360)
Q Consensus 230 A~~~~~----~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~~---~~~~~~d~~g~Tpl~~A~~~~~~ 301 (360)
|+..++ .+++++|+++|+++ +.++. .|+||||+|+..++.+ +++|+. ++++.+|..|+||||+|++.|+.
T Consensus 189 a~~~~~~~~~~~i~~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~ 266 (285)
T 1wdy_A 189 ALLSSDDSDVEAITHLLLDHGADV-NVRGE-RGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLK 266 (285)
T ss_dssp HHHCSCTTTHHHHHHHHHHTTCCS-SCCCT-TSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred HHHccccchHHHHHHHHHHcCCCC-CCcCC-CCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcH
Confidence 999999 99999999999999 99999 9999999999999999 888873 88999999999999999999999
Q ss_pred HHHHHHhhhh
Q 039483 302 EIFDDLSGRV 311 (360)
Q Consensus 302 ~i~~~l~~~~ 311 (360)
++++.|+++.
T Consensus 267 ~i~~~Ll~~G 276 (285)
T 1wdy_A 267 KIAELLCKRG 276 (285)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHHcC
Confidence 9999999875
|
| >1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=298.94 Aligned_cols=230 Identities=20% Similarity=0.221 Sum_probs=163.7
Q ss_pred ccccc-ccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchh---------hHHH----
Q 039483 60 QSCIS-TSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGA---------SRQM---- 125 (360)
Q Consensus 60 ~~~v~-l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~---------~~~~---- 125 (360)
.++++ |.+. +.++ +.++..|.|| ||+||..|+.+++++|+++|++++..|..+.++.+. ++.+
T Consensus 27 ~~~v~~Ll~~-g~~~-~~~~~~~~t~-L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 103 (437)
T 1n11_A 27 LPIVKNLLQR-GASP-NVSNVKVETP-LHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENN 103 (437)
T ss_dssp HHHHHHHHHT-TCCS-CCSSSCCCCH-HHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCHHHHHHHHHHT
T ss_pred HHHHHHHHHc-CCCC-CCCCCCCCCH-HHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhCC
Confidence 67777 7777 8899 9999999999 999999999999999999999999998888888433 3444
Q ss_pred --hhcccCCCCchHHHhh-h-----------------------cCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCC
Q 039483 126 --IRMTNKEKHTTLHEAY-N-----------------------KIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPME 179 (360)
Q Consensus 126 --l~~~d~~g~t~Lh~a~-~-----------------------~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g 179 (360)
++..+..|.||||+|+ + .||||+|+..|+ .+++++|+++|++++. .+..|
T Consensus 104 a~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~-~~~v~~Ll~~g~~~~~---~~~~g 179 (437)
T 1n11_A 104 ANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGK-VRVAELLLERDAHPNA---AGKNG 179 (437)
T ss_dssp CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTC-HHHHHHHHHTTCCTTC---CCSSC
T ss_pred CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCC-HHHHHHHHhCCCCCCC---CCCCC
Confidence 4567888999999998 2 588888888888 8888888888888887 78888
Q ss_pred CcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCC
Q 039483 180 RQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKM 259 (360)
Q Consensus 180 ~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~ 259 (360)
.||||+|+..++. +++++|++.+ .+++..+..|.||||+|+..|+.+++++|++.|+++ +..+. .|.
T Consensus 180 ~t~L~~A~~~~~~----------~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~-~g~ 246 (437)
T 1n11_A 180 LTPLHVAVHHNNL----------DIVKLLLPRG-GSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSA-NAESV-QGV 246 (437)
T ss_dssp CCHHHHHHHTTCH----------HHHHHHGGGT-CCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-TCC
T ss_pred CCHHHHHHHcCCH----------HHHHHHHhCC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCC-CCC
Confidence 8888888888877 7777777666 445555555666666666666666666666555555 55555 555
Q ss_pred chhhhhhcCCccc-cccccc--ccCccCCCCCCcHHHHHHHcCCHHHHHHHhh
Q 039483 260 TALHLVHGPKGCQ-NNMLAS--SLMDEGDAKGNTTVHFFAAVHRKEIFDDLSG 309 (360)
Q Consensus 260 tpLh~A~~~~~~~-~~~L~~--~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~ 309 (360)
||||+|+..++.+ +++|+. ++++.+|..|+||||+|++.|+.++++.|.+
T Consensus 247 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 299 (437)
T 1n11_A 247 TPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIK 299 (437)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred CHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 5555555555555 444442 4444444444444444444444444444444
|
| >4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-37 Score=288.42 Aligned_cols=234 Identities=17% Similarity=0.120 Sum_probs=202.1
Q ss_pred CCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCC-CCCChHHHHHHhcCCHHHHHHH
Q 039483 23 PQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTA-KGDTRSRHVAAKFDHCDIVSVL 101 (360)
Q Consensus 23 ~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~-~g~tp~Lh~A~~~g~~~~v~~L 101 (360)
..+.++||.||++|++++|+.|++. +.++ +.++. .|.|| ||+||..|+.++|++|
T Consensus 23 ~~~~t~L~~Av~~g~~~~V~~LL~~----------------------Gadv-n~~~~~~g~Tp-Lh~A~~~g~~~iv~~L 78 (337)
T 4g8k_A 23 VEDNHLLIKAVQNEDVDLVQQLLEG----------------------GANV-NFQEEEGGWTP-LHNAVQMSREDIVELL 78 (337)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHH----------------------TCCT-TCCCTTTCCCH-HHHHHHTTCHHHHHHH
T ss_pred CCCChHHHHHHHcCCHHHHHHHHHC----------------------CCCC-CccCCCCCcCH-HHHHHHcCCHHHHHHH
Confidence 3357899999999999999999984 6677 77765 49999 9999999999999999
Q ss_pred HHhccccCcccccccccchhhHHHhhcccCCCCchHHHhh-h-----------------------cCHHHHHHhcCCcHH
Q 039483 102 IERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAY-N-----------------------KIPLCMAAEYEHSSH 157 (360)
Q Consensus 102 l~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~-~-----------------------~t~L~~A~~~g~~~~ 157 (360)
+++|++++. ++..+.++++.+. . .||||+|+..|+ .+
T Consensus 79 l~~ga~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~-~~ 139 (337)
T 4g8k_A 79 LRHGADPVL------------------RKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGK-VK 139 (337)
T ss_dssp HHTTCCTTC------------------CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTC-HH
T ss_pred HHcCCchhh------------------hccCCCchhHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCc-HH
Confidence 999999998 4555555555544 1 589999999999 99
Q ss_pred HHHHHHhhCCCCCccc-------cCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHH
Q 039483 158 TVVAILKSCTSVSHIY-------MKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYA 230 (360)
Q Consensus 158 ~~~~Ll~~g~~~~~~~-------~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A 230 (360)
++++|+++|++++... ..+..|.||||+|+..|+. +++++|+...+.+++.+|..|.|++|.+
T Consensus 140 ~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~----------~~v~~LL~~~gad~n~~d~~g~t~l~~~ 209 (337)
T 4g8k_A 140 ALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHV----------EVLKILLDEMGADVNACDNMGRNALIHA 209 (337)
T ss_dssp HHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCH----------HHHHHHHHHSCCCTTCCCTTSCCHHHHH
T ss_pred HHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCH----------HHHHHHHhccCCCcCccCCCCCcHHHHH
Confidence 9999999998876411 1344689999999999999 9999999765488999999999999998
Q ss_pred HHcCC----HHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-ccccc---cccCccCCCCCCcHHHHHHHcCCHH
Q 039483 231 AYHRN----YLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLA---SSLMDEGDAKGNTTVHFFAAVHRKE 302 (360)
Q Consensus 231 ~~~~~----~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~---~~~~~~~d~~g~Tpl~~A~~~~~~~ 302 (360)
+..+. ..++++|+++|+++ +.++. .|+||||+|+..++.+ ++.|+ +++++.+|..|+||||+|++.|+.+
T Consensus 210 ~~~~~~~~~~~i~~lLl~~gad~-n~~d~-~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~ 287 (337)
T 4g8k_A 210 LLSSDDSDVEAITHLLLDHGADV-NVRGE-RGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKK 287 (337)
T ss_dssp HHHSCTTTHHHHHHHHHHTTCCT-TCCCG-GGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHH
T ss_pred HHHcCcccHHHHHHHHHHCCCCC-CCcCC-CCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHH
Confidence 87654 46889999999999 99999 9999999999999998 77776 3899999999999999999999999
Q ss_pred HHHHHhhhh
Q 039483 303 IFDDLSGRV 311 (360)
Q Consensus 303 i~~~l~~~~ 311 (360)
+++.|+++.
T Consensus 288 iv~~Ll~~G 296 (337)
T 4g8k_A 288 IAELLCKRG 296 (337)
T ss_dssp HHHHHHTTS
T ss_pred HHHHHHHCC
Confidence 999998863
|
| >1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-38 Score=276.65 Aligned_cols=226 Identities=16% Similarity=0.144 Sum_probs=202.9
Q ss_pred CCCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHH
Q 039483 22 QPQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVL 101 (360)
Q Consensus 22 ~~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~L 101 (360)
...+.+|||.||+.|+.++++.|++.-... +..+ +.+|..|.|| ||+|+..|+.+++++|
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~------------------~~~~-~~~~~~g~t~-L~~A~~~~~~~~v~~L 65 (241)
T 1k1a_A 6 DEDGDTPLHIAVVQGNLPAVHRLVNLFQQG------------------GREL-DIYNNLRQTP-LHLAVITTLPSVVRLL 65 (241)
T ss_dssp -CTTCCHHHHHHHTTCHHHHHHHHHHHHHT------------------TCCS-CCCCTTSCCH-HHHHHHTTCHHHHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHHHHhc------------------CCCC-CcccccCCCH-HHHHHHcCCHHHHHHH
Confidence 456779999999999999999999832222 6778 8899999999 9999999999999999
Q ss_pred HHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCC----CCCccccCCC
Q 039483 102 IERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCT----SVSHIYMKAP 177 (360)
Q Consensus 102 l~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~----~~~~~~~~d~ 177 (360)
+++|++++. .|..|. ||||+|+..|+ .+++++|++.+. +++. .+.
T Consensus 66 l~~g~~~~~------------------~~~~g~---------t~l~~A~~~~~-~~~~~~Ll~~~~~~~~~~~~---~~~ 114 (241)
T 1k1a_A 66 VTAGASPMA------------------LDRHGQ---------TAAHLACEHRS-PTCLRALLDSAAPGTLDLEA---RNY 114 (241)
T ss_dssp HHTTCCTTC------------------CCTTSC---------CHHHHHHHTTC-HHHHHHHHHHSCTTSCCTTC---CCT
T ss_pred HHcCCCccc------------------cCCCCC---------CHHHHHHHcCC-HHHHHHHHHcCCCccccccc---cCc
Confidence 999999887 777775 78888889999 999999999987 7777 899
Q ss_pred CCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCcccccccc-CCCChHHHHHHHcCCHHHHHHHHhcCCccccccccC
Q 039483 178 MERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGID-QCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKD 256 (360)
Q Consensus 178 ~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d-~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~ 256 (360)
.|.||||+|+..++. +++++|++.+ .+++..+ ..|.||||+|+..|+.+++++|+++|+++ +.++.
T Consensus 115 ~g~t~L~~A~~~~~~----------~~~~~Ll~~g-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~- 181 (241)
T 1k1a_A 115 DGLTALHVAVNTECQ----------ETVQLLLERG-ADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANV-NAQMY- 181 (241)
T ss_dssp TSCCHHHHHHHHTCH----------HHHHHHHHTT-CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCBCT-
T ss_pred CCCcHHHHHHHcCCH----------HHHHHHHHcC-CCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCC-
Confidence 999999999999999 9999999999 7788888 88999999999999999999999999999 99999
Q ss_pred CCCchhhhhhcCCccc-ccccc--cccCccCCCCCCcHHHHHHHcCCHHHHHHHhhhh
Q 039483 257 RKMTALHLVHGPKGCQ-NNMLA--SSLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGRV 311 (360)
Q Consensus 257 ~g~tpLh~A~~~~~~~-~~~L~--~~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~~ 311 (360)
.|+||||+|+..++.+ +++|+ +++++.+|..|+||+|+|++.|+.++++.|..+.
T Consensus 182 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~~ 239 (241)
T 1k1a_A 182 SGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRP 239 (241)
T ss_dssp TSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC-----
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhccCC
Confidence 9999999999999999 88888 4999999999999999999999999999887764
|
| >3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-37 Score=269.57 Aligned_cols=220 Identities=19% Similarity=0.171 Sum_probs=204.1
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHh
Q 039483 25 IDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIER 104 (360)
Q Consensus 25 ~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~ 104 (360)
.+++||.||..|+++.++.+++.. +..+ +.+|..|.|| ||+|+..|+.+++++|+++
T Consensus 6 ~~~~l~~A~~~g~~~~v~~ll~~~---------------------~~~~-~~~~~~g~t~-L~~A~~~g~~~~v~~Ll~~ 62 (231)
T 3aji_A 6 SNIMICNLAYSGKLDELKERILAD---------------------KSLA-TRTDQDSRTA-LHWACSAGHTEIVEFLLQL 62 (231)
T ss_dssp SSSHHHHHHHHTCHHHHHHHHHHC---------------------GGGG-GCCCTTSCCH-HHHHHHHTCHHHHHHHHHT
T ss_pred ccchHHHHHHhCCHHHHHHHHHhc---------------------hhhh-hcCCCCCCCH-HHHHHHcCcHHHHHHHHHh
Confidence 457899999999999999999842 3345 7789999999 9999999999999999999
Q ss_pred ccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHH
Q 039483 105 AKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALH 184 (360)
Q Consensus 105 g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh 184 (360)
|++++. .|..|. ||||+|+..|+ .+++++|+++|++++. ++..|.||||
T Consensus 63 g~~~~~------------------~~~~g~---------t~L~~A~~~~~-~~~v~~Ll~~g~~~~~---~~~~g~t~L~ 111 (231)
T 3aji_A 63 GVPVND------------------KDDAGW---------SPLHIAASAGX-DEIVKALLVKGAHVNA---VNQNGCTPLH 111 (231)
T ss_dssp TCCSCC------------------CCTTSC---------CHHHHHHHHTC-HHHHHHHHHTTCCTTC---CCTTSCCHHH
T ss_pred CCCCCC------------------cCCCCC---------CHHHHHHHcCH-HHHHHHHHHcCCCCCC---CCCCCCCHHH
Confidence 999887 777875 78888889999 9999999999999999 9999999999
Q ss_pred HHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhh
Q 039483 185 AATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHL 264 (360)
Q Consensus 185 ~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~ 264 (360)
+|+..++. +++++|++.+ .+++..+..|.||||+|+..|+.+++++|+++|+++ +.+|. .|+||||+
T Consensus 112 ~A~~~~~~----------~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~~ 178 (231)
T 3aji_A 112 YAASKNRH----------EIAVMLLEGG-ANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKAST-NIQDT-EGNTPLHL 178 (231)
T ss_dssp HHHHTTCH----------HHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCT-TSCCHHHH
T ss_pred HHHHcCCH----------HHHHHHHHcC-CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCc-cccCC-CCCCHHHH
Confidence 99999999 9999999998 888999999999999999999999999999999999 99999 99999999
Q ss_pred hhcCCccc-ccccc--cccCccCCCCCCcHHHHHHHcCCHHHHHHHhhhh
Q 039483 265 VHGPKGCQ-NNMLA--SSLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGRV 311 (360)
Q Consensus 265 A~~~~~~~-~~~L~--~~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~~ 311 (360)
|+..++.+ +++|+ +++++.+|..|+||+|+|++.++.++++.|.++.
T Consensus 179 A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~ 228 (231)
T 3aji_A 179 ACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEGEE 228 (231)
T ss_dssp HHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHcccc
Confidence 99999998 88888 4899999999999999999999999999988764
|
| >3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=268.50 Aligned_cols=225 Identities=18% Similarity=0.134 Sum_probs=205.6
Q ss_pred CCCCCCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHH
Q 039483 19 ETSQPQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIV 98 (360)
Q Consensus 19 ~~~~~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v 98 (360)
......+.+|||.||..|+.++++.|++. +..+ +..+..|.|| ||+|+..|+.+++
T Consensus 5 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~----------------------g~~~-~~~~~~g~t~-L~~A~~~~~~~~v 60 (237)
T 3b7b_A 5 KMEHQNKRSPLHAAAEAGHVDICHMLVQA----------------------GANI-DTCSEDQRTP-LMEAAENNHLEAV 60 (237)
T ss_dssp CCSSCCSCCHHHHHHHHTCHHHHHHHHHT----------------------TCCT-TCCCTTCCCH-HHHHHHTTCHHHH
T ss_pred ccccCCCCCHHHHHHHcCcHHHHHHHHHc----------------------CCCc-CccCCCCCCH-HHHHHHhCCHHHH
Confidence 34456678999999999999999999884 5666 8889999999 9999999999999
Q ss_pred HHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhC-CCCCccccCCC
Q 039483 99 SVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSC-TSVSHIYMKAP 177 (360)
Q Consensus 99 ~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g-~~~~~~~~~d~ 177 (360)
++|+++|++++. .+..|. ||||+|+..|+ .+++++|++.| .+++. ++.
T Consensus 61 ~~Ll~~g~~~~~------------------~~~~g~---------t~L~~A~~~~~-~~~~~~Ll~~~~~~~~~---~~~ 109 (237)
T 3b7b_A 61 KYLIKAGALVDP------------------KDAEGS---------TCLHLAAKKGH-YEVVQYLLSNGQMDVNC---QDD 109 (237)
T ss_dssp HHHHTTTCCCCC------------------CCTTSC---------CHHHHHHHTTC-HHHHHHHHTTTCCCTTC---CCT
T ss_pred HHHHhCCCCCCC------------------CCCCCC---------cHHHHHHHcCC-HHHHHHHHhCCCCCccc---CCC
Confidence 999999999887 777775 78888889999 99999999998 78888 899
Q ss_pred CCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCC
Q 039483 178 MERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDR 257 (360)
Q Consensus 178 ~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~ 257 (360)
.|.||||+|+..++. +++++|++.+ .+++..+..|.||||+|+..|+.+++++|++.|+++ +.+|. .
T Consensus 110 ~g~t~L~~A~~~~~~----------~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~-~ 176 (237)
T 3b7b_A 110 GGWTPMIWATEYKHV----------DLVKLLLSKG-SDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDL-HAVNI-H 176 (237)
T ss_dssp TSCCHHHHHHHTTCH----------HHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCT-TCCCT-T
T ss_pred CCCCHHHHHHHcCCH----------HHHHHHHHCC-CCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCcCC-C
Confidence 999999999999999 9999999998 788999999999999999999999999999999999 99999 9
Q ss_pred CCchhhhhhcCCccc-cccccc--ccCccCCCCCCcHHHHHHHcCCHHHHHHHhhhh
Q 039483 258 KMTALHLVHGPKGCQ-NNMLAS--SLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGRV 311 (360)
Q Consensus 258 g~tpLh~A~~~~~~~-~~~L~~--~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~~ 311 (360)
|.||||+|+..++.+ +++|+. ++++.+|..|+||+|+|++.++.+.+..+.+..
T Consensus 177 g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~~~~~l~~~l 233 (237)
T 3b7b_A 177 GDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMSKAL 233 (237)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999988 888884 999999999999999999999987777666543
|
| >3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-37 Score=279.88 Aligned_cols=236 Identities=14% Similarity=0.045 Sum_probs=152.0
Q ss_pred CCCCCCCCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHH
Q 039483 17 NGETSQPQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCD 96 (360)
Q Consensus 17 ~~~~~~~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~ 96 (360)
+.+.+..++.++||+||+.|+.+.+..++....... . ...+. ...+ +..|..|.|| ||+||..|+.+
T Consensus 7 ~~~~~~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~-~-------~~~l~---~~~~-~~~~~~g~t~-L~~Aa~~g~~~ 73 (285)
T 3d9h_A 7 HHHHSSGLVPRGSHMASMDGKQGGMDGSKPAGPRDF-P-------GIRLL---SNPL-MGDAVSDWSP-MHEAAIHGHQL 73 (285)
T ss_dssp -----------------------------------C-C-------SEECC---CCTT-CSSSCCSCCH-HHHHHHTTCHH
T ss_pred cccccchHHHHHHHHHhhcCCCCCcccCCCCccccc-c-------chhhh---hCcc-cCCCccCCCH-HHHHHHcCCHH
Confidence 345667889999999999999988888777432210 0 00011 2235 7788999999 99999999999
Q ss_pred HHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCC
Q 039483 97 IVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKA 176 (360)
Q Consensus 97 ~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d 176 (360)
++++|++.|++++. +|..|. ||||+|+..|+ .+++++|+++|++++. +|
T Consensus 74 ~v~~Ll~~g~~~~~------------------~~~~g~---------t~L~~A~~~g~-~~~v~~Ll~~ga~~~~---~~ 122 (285)
T 3d9h_A 74 SLRNLISQGWAVNI------------------ITADHV---------SPLHEACLGGH-LSCVKILLKHGAQVNG---VT 122 (285)
T ss_dssp HHHHHHHTTCCSCE------------------ECTTCC---------CHHHHHHHTTC-HHHHHHHHHTTCCSSC---CC
T ss_pred HHHHHHHCCCCCCC------------------cCCCCC---------CHHHHHHHCCc-HHHHHHHHHCCCCCCC---CC
Confidence 99999999999887 788886 66667777777 8888888888877777 77
Q ss_pred CCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccC
Q 039483 177 PMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKD 256 (360)
Q Consensus 177 ~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~ 256 (360)
..|.||||+|+..|+. +++++|++.+ .+++. +..|.||||+|+..|+.+++++|+++|+++ +.+|.
T Consensus 123 ~~g~t~L~~A~~~~~~----------~~v~~Ll~~g-~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~- 188 (285)
T 3d9h_A 123 ADWHTPLFNACVSGSW----------DCVNLLLQHG-ASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNI-DHKIS- 188 (285)
T ss_dssp TTCCCHHHHHHHHTCH----------HHHHHHHHTT-CCSSC-SCTTSCHHHHHHHHTCHHHHHHHHHTTCCT-TCCBT-
T ss_pred CCCCCHHHHHHHcCHH----------HHHHHHHHCC-CCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCC-
Confidence 7788888888888888 8888888777 44443 334778888888888888888888888777 77777
Q ss_pred CCCchhhhhhcCCccc-cccccc--ccCccCCCCCCcHHHHHHHcCCHHHHHHHhhhh
Q 039483 257 RKMTALHLVHGPKGCQ-NNMLAS--SLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGRV 311 (360)
Q Consensus 257 ~g~tpLh~A~~~~~~~-~~~L~~--~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~~ 311 (360)
.|+||||+|+..++.+ +++|+. ++++. |..|+||||+|++.++.++++.|++..
T Consensus 189 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g 245 (285)
T 3d9h_A 189 HLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMDFG 245 (285)
T ss_dssp TTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 7888888887777777 777763 56653 677788888888888888888777763
|
| >1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-36 Score=271.78 Aligned_cols=215 Identities=16% Similarity=0.111 Sum_probs=175.7
Q ss_pred CCCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHH
Q 039483 22 QPQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVL 101 (360)
Q Consensus 22 ~~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~L 101 (360)
...+.+|||.||+.|+.++++.|++...+ +..+ +.+|..|.|| ||+||..|+.+++++|
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-------------------~~~~-~~~~~~g~t~-L~~A~~~g~~~~v~~L 64 (282)
T 1oy3_D 6 TEDGDTALHLAVIHQHEPFLDFLLGFSAG-------------------HEYL-DLQNDLGQTA-LHLAAILGEASTVEKL 64 (282)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHHHTT-------------------SGGG-GCCCTTSCCH-HHHHHHHTCHHHHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCC-------------------cccc-cccCCCCCCH-HHHHHHcCCHHHHHHH
Confidence 45677999999999999999999984322 2236 7889999999 9999999999999999
Q ss_pred HHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCC-------------
Q 039483 102 IERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTS------------- 168 (360)
Q Consensus 102 l~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~------------- 168 (360)
+++|++++. +|..|. ||||+|+..|+ .+++++|+++|++
T Consensus 65 l~~ga~~~~------------------~~~~g~---------tpL~~A~~~~~-~~~v~~Ll~~~~~~~~~~~~~~~~~~ 116 (282)
T 1oy3_D 65 YAAGAGVLV------------------AERGGH---------TALHLACRVRA-HTCACVLLQPRPSHPRDASDTYLTQS 116 (282)
T ss_dssp HHTTCCSSC------------------CCTTSC---------CHHHHHTTTTC-HHHHHHHSSSCCSSCCCC--------
T ss_pred HHcCCCCCC------------------CCCCCC---------CHHHHHHHcCC-cchhHhhhccCCCCchhhHHHHhhcc
Confidence 999999988 788885 77778888899 9999999998765
Q ss_pred ----------------------------------CCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCcc
Q 039483 169 ----------------------------------VSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKS 214 (360)
Q Consensus 169 ----------------------------------~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~ 214 (360)
++. ++..|.||||+|+..|+. +++++|++.+ .
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~t~L~~A~~~g~~----------~~v~~Ll~~g-~ 182 (282)
T 1oy3_D 117 QDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEA---ENYDGHTPLHVAVIHKDA----------EMVRLLRDAG-A 182 (282)
T ss_dssp ---------------------------CCCGGGGTTC---CCTTSCCHHHHHHHTTCH----------HHHHHHHHHT-C
T ss_pred cccCcchhcchhhhccccccchhhhhhhhhhhhcCCC---cCCCCcCHHHHHHHcCCH----------HHHHHHHHcC-C
Confidence 445 778899999999999999 9999999998 7
Q ss_pred ccccccC-CCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-ccccc--cccCccCCCCCCc
Q 039483 215 MIKGIDQ-CWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLA--SSLMDEGDAKGNT 290 (360)
Q Consensus 215 ~i~~~d~-~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~--~~~~~~~d~~g~T 290 (360)
+++..+. .|+||||+|+..|+.+++++|+++|+++ +.+|. .|+||||+|+..++.+ +++|+ +++++.+|..|.|
T Consensus 183 ~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~-~~~d~-~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t 260 (282)
T 1oy3_D 183 DLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADP-TARMY-GGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLS 260 (282)
T ss_dssp CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-TSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC-----
T ss_pred CCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCC-ccccc-CCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccc
Confidence 7888875 4999999999999999999999999999 99999 9999999999999988 88888 4999999999999
Q ss_pred HHHHHHHcCCH
Q 039483 291 TVHFFAAVHRK 301 (360)
Q Consensus 291 pl~~A~~~~~~ 301 (360)
|+++|......
T Consensus 261 pl~~a~~~~~~ 271 (282)
T 1oy3_D 261 PCSSSGSDSDS 271 (282)
T ss_dssp -----------
T ss_pred cccccCCcccc
Confidence 99999876543
|
| >2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=260.55 Aligned_cols=217 Identities=15% Similarity=0.145 Sum_probs=190.7
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHh
Q 039483 25 IDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIER 104 (360)
Q Consensus 25 ~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~ 104 (360)
+.+|||.|++.|+.+.++.|++.. +... +.+|..|.|| ||+|+..|+.+++++|+++
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~---------------------~~~~-~~~~~~g~t~-L~~A~~~~~~~~v~~Ll~~ 58 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSK---------------------PSLL-LQKDQDGRIP-LHWSVSFQAHEITSFLLSK 58 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHC---------------------GGGT-TCCCTTSCCH-HHHHHHTTCHHHHHHHHHT
T ss_pred CccHHHHHHHhCCHHHHHHHHhcC---------------------cccc-ccCCCCCCCH-HHHHHHcCCHHHHHHHHhc
Confidence 358999999999999999999853 2233 6688999999 9999999999999999999
Q ss_pred ccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhC--CCCCccccCCCCCCcH
Q 039483 105 AKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSC--TSVSHIYMKAPMERQA 182 (360)
Q Consensus 105 g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g--~~~~~~~~~d~~g~t~ 182 (360)
|++++.. ...|..|. ||||+|+..|+ .+++++|+++| ++++. ++..|.||
T Consensus 59 ~~~~~~~---------------~~~~~~g~---------t~L~~A~~~~~-~~~~~~Ll~~g~~~~~~~---~~~~g~t~ 110 (228)
T 2dzn_A 59 MENVNLD---------------DYPDDSGW---------TPFHIACSVGN-LEVVKSLYDRPLKPDLNK---ITNQGVTC 110 (228)
T ss_dssp CTTCCGG---------------GCCCTTSC---------CHHHHHHHHCC-HHHHHHHHSSSSCCCTTC---CCTTCCCH
T ss_pred ccccccc---------------ccCCCCCC---------CHHHHHHHcCC-HHHHHHHHhCCCCccccc---CCcCCCCH
Confidence 9555431 01556664 88888899999 99999999999 78888 89999999
Q ss_pred HHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcC-CccccccccCCCCch
Q 039483 183 LHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKID-RTAAKIADKDRKMTA 261 (360)
Q Consensus 183 Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~~~~~~~d~~~g~tp 261 (360)
||+|+..++. +++++|++.+ .+++.+|..|+||||+|+..|+.+++++|++.| +++ +.+|. .|+||
T Consensus 111 L~~A~~~~~~----------~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~d~-~g~t~ 177 (228)
T 2dzn_A 111 LHLAVGKKWF----------EVSQFLIENG-ASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAV-NWQDK-QGWTP 177 (228)
T ss_dssp HHHHHHTTCH----------HHHHHHHHTT-CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCS-CCCCT-TSCCH
T ss_pred HHHHHHcCCH----------hHHHHHHHcC-CCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccc-cCcCC-CCCCH
Confidence 9999999999 9999999998 889999999999999999999999999999999 888 99999 99999
Q ss_pred hhhhhcCCccc-ccccc---cccCccCCCCCCcHHHHHHHcCCHHHHHHHh
Q 039483 262 LHLVHGPKGCQ-NNMLA---SSLMDEGDAKGNTTVHFFAAVHRKEIFDDLS 308 (360)
Q Consensus 262 Lh~A~~~~~~~-~~~L~---~~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~ 308 (360)
||+|+..++.+ +++|+ +++++.+|..|+||+++|++. ++.+.|.
T Consensus 178 L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~---~~~~~l~ 225 (228)
T 2dzn_A 178 LFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE---QVKKFFL 225 (228)
T ss_dssp HHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSST---THHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHH---HHHHHHH
Confidence 99999999999 88888 499999999999999999765 4444443
|
| >4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-37 Score=275.25 Aligned_cols=216 Identities=17% Similarity=0.141 Sum_probs=142.1
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCH-HHHHHHHH
Q 039483 25 IDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHC-DIVSVLIE 103 (360)
Q Consensus 25 ~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~-~~v~~Ll~ 103 (360)
..++|+.||+.|+.++|+.|++...... . .. ...+ +..+..|.|| ||.|+..++. .++++|++
T Consensus 11 ~~~~L~~A~~~G~~~~v~~LL~~~~~~~-~------------~~-~~~~-~~~~~~~~t~-L~~a~~~~~~~~~v~~Ll~ 74 (269)
T 4b93_B 11 EVEKLLRAVADGDLEMVRYLLEWTEEDL-E------------DA-EDTV-SAADPEFCHP-LCQCPKCAPAQKRLAKVPA 74 (269)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHTCC--------------------------------------------------------
T ss_pred chhHHHHHHHcCCHHHHHHHHHCCCccc-c------------cc-cccc-cccCccCCCH-HHHHHHhCCHHHHHHHHHH
Confidence 3478999999999999999998321110 0 00 2334 5667777888 8888877765 46777888
Q ss_pred hccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHH
Q 039483 104 RAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQAL 183 (360)
Q Consensus 104 ~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~L 183 (360)
.|++++. +|.+|. ||||+|+..|+ .+++++|++.|++++. ++..|.||+
T Consensus 75 ~Gadvn~------------------~d~~G~---------TpLh~A~~~g~-~~~v~~Ll~~~a~~~~---~~~~g~t~l 123 (269)
T 4b93_B 75 SGLGVNV------------------TSQDGS---------SPLHVAALHGR-ADLIPLLLKHGANAGA---RNADQAVPL 123 (269)
T ss_dssp CCCCTTC------------------CCTTSC---------CHHHHHHHTTC-TTHHHHHHHTTCCTTC---CCTTCCCHH
T ss_pred CCCCCCC------------------cCCCCC---------CHHHHHHHcCc-HHHHHHHHhcCCCcCc---cCCCCCCcc
Confidence 8888777 677774 66677777788 8888888888888877 777888888
Q ss_pred HHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhh
Q 039483 184 HAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALH 263 (360)
Q Consensus 184 h~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh 263 (360)
|+|+..++. +++++|++.+ .+++.+|..|+||||+|+..|+.+++++|+++|+++ +.++. .|+||||
T Consensus 124 ~~a~~~~~~----------~~~~~Ll~~g-~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadv-n~~~~-~g~t~Lh 190 (269)
T 4b93_B 124 HLACQQGHF----------QVVKCLLDSN-AKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASI-NASNN-KGNTALH 190 (269)
T ss_dssp HHHHHHTCH----------HHHHHHHHTT-CCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCT-TCBCT-TSCBHHH
T ss_pred ccccccChH----------HHHHHHHHCC-CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCC-Ccccc-CCCcHHH
Confidence 888888888 8888888877 777788888888888888888888888888888888 88887 8888888
Q ss_pred hhhcCCccc-ccccc--cccCccCCCCCCcHHHHHHHcCC
Q 039483 264 LVHGPKGCQ-NNMLA--SSLMDEGDAKGNTTVHFFAAVHR 300 (360)
Q Consensus 264 ~A~~~~~~~-~~~L~--~~~~~~~d~~g~Tpl~~A~~~~~ 300 (360)
+|+..++.+ +++|+ +++++.+|..|+||||+|+++++
T Consensus 191 ~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 191 EAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp HHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCH
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCc
Confidence 888888777 77777 37788888888888888876553
|
| >3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=279.37 Aligned_cols=225 Identities=16% Similarity=0.092 Sum_probs=201.0
Q ss_pred CCCCCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHH
Q 039483 20 TSQPQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVS 99 (360)
Q Consensus 20 ~~~~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~ 99 (360)
.....+.+|||.||..|+.++++.|++. +.++ +.+|..|.|| ||+||..|+.++|+
T Consensus 15 ~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~----------------------g~~~-~~~d~~g~t~-L~~A~~~g~~~~v~ 70 (364)
T 3ljn_A 15 KSDDENMEKIHVAARKGQTDEVRRLIET----------------------GVSP-TIQNRFGCTA-LHLACKFGCVDTAK 70 (364)
T ss_dssp -CCHHHHHHHHHHHHHTCHHHHHHHHHT----------------------TCCT-TCCCTTCCCH-HHHHHHHCCHHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHc----------------------CCCc-cccCCCCCcH-HHHHHHcCCHHHHH
Confidence 3445667999999999999999999984 6677 8899999999 99999999999999
Q ss_pred HHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhh----CCCCCcc---
Q 039483 100 VLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKS----CTSVSHI--- 172 (360)
Q Consensus 100 ~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~----g~~~~~~--- 172 (360)
+|+++|++++. .+| .||||+|+..|+ .+++++|++. |.+++.+
T Consensus 71 ~Ll~~g~~~~~--------------------~~g---------~t~L~~A~~~g~-~~~v~~Ll~~~~~~~~~~~~~~~~ 120 (364)
T 3ljn_A 71 YLASVGEVHSL--------------------WHG---------QKPIHLAVMANK-TDLVVALVEGAKERGQMPESLLNE 120 (364)
T ss_dssp HHHHHCCCCCC--------------------BTT---------BCHHHHHHHTTC-HHHHHHHHHHHHHHTCCHHHHHTC
T ss_pred HHHHCCCCccc--------------------cCC---------CCHHHHHHHcCC-HHHHHHHHHhccccCCCHHHHHhh
Confidence 99999996543 245 488899999999 9999999998 6554320
Q ss_pred -----------ccCCCCCCcHHHHHHhcC--CcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHH
Q 039483 173 -----------YMKAPMERQALHAATMHI--DLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLIL 239 (360)
Q Consensus 173 -----------~~~d~~g~t~Lh~A~~~~--~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v 239 (360)
..++..|.||||+|+..| +. +++++|++.+ .+++..|..|+||||+|+..|+.+++
T Consensus 121 ~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~----------~~v~~Ll~~g-a~~~~~d~~g~t~L~~A~~~g~~~~v 189 (364)
T 3ljn_A 121 CDEREVNEIGSHVKHCKGQTALHWCVGLGPEYL----------EMIKILVQLG-ASPTAKDKADETPLMRAMEFRNREAL 189 (364)
T ss_dssp CCCCCEEEETTEEEEESCCCHHHHHHHSCGGGH----------HHHHHHHHHT-CCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred cchHhhhhhccccCCCCCCCHHHHHHHcCCchH----------HHHHHHHHcC-CCCcccCCCCCCHHHHHHHcCCHHHH
Confidence 015668999999999999 99 9999999998 88999999999999999999999999
Q ss_pred HHHHhcCCc-----cccccccCCCCchhhhhhcCCccc-cccccc--ccCccCCCCCCcHHHHHHHcCCHHHHHHHhhhh
Q 039483 240 KLILKIDRT-----AAKIADKDRKMTALHLVHGPKGCQ-NNMLAS--SLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGRV 311 (360)
Q Consensus 240 ~~Ll~~g~~-----~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~~--~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~~ 311 (360)
++|+++|++ + +..|. .|+||||+|+..++.+ +++|+. ++++.+|..|+||||+|++.|+.++++.|+++.
T Consensus 190 ~~Ll~~g~~~~~~~~-~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~ 267 (364)
T 3ljn_A 190 DLMMDTVPSKSSLRL-DYANK-QGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKT 267 (364)
T ss_dssp HHHHHHCSCSSSCCT-TCCCT-TCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHS
T ss_pred HHHHhcccccccccc-cccCC-CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcC
Confidence 999999998 8 99999 9999999999999999 899984 899999999999999999999999999999874
|
| >2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-36 Score=282.07 Aligned_cols=198 Identities=17% Similarity=0.125 Sum_probs=182.5
Q ss_pred ccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHH
Q 039483 67 NCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPL 146 (360)
Q Consensus 67 ~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L 146 (360)
.. +.++ +.+|..|.|| ||+|+..|+.++|++|+++|++++. .|..|. |||
T Consensus 154 ~~-ga~v-n~~d~~g~Tp-L~~A~~~g~~~iv~~Ll~~ga~~~~------------------~~~~g~---------t~L 203 (373)
T 2fo1_E 154 AA-GADV-NAMDCDENTP-LMLAVLARRRRLVAYLMKAGADPTI------------------YNKSER---------SAL 203 (373)
T ss_dssp HT-CCCT-TCCCTTSCCH-HHHHHHHTCHHHHHHHHHTTCCSCC------------------CCTTCC---------CHH
T ss_pred hc-CCCC-cCCCCCCCCH-HHHHHHcChHHHHHHHHHCCCCCcc------------------cCCCCC---------CHH
Confidence 45 8889 9999999999 9999999999999999999999988 788885 788
Q ss_pred HHHHhcCCcHHHHHHHHhhC---CCCCccccCCCCCCcHHHHHHhcC---CcccccccCChHHHHHHHHhcCcccccc--
Q 039483 147 CMAAEYEHSSHTVVAILKSC---TSVSHIYMKAPMERQALHAATMHI---DLCKFNHTLSNDCAVQQLFEGKKSMIKG-- 218 (360)
Q Consensus 147 ~~A~~~g~~~~~~~~Ll~~g---~~~~~~~~~d~~g~t~Lh~A~~~~---~~~~~~~~~~~~~~~~~Ll~~~~~~i~~-- 218 (360)
|+|+..|+ .+++++|++++ .+++. +|..|.||||+|+..+ +. +++++|++.+ .+++.
T Consensus 204 ~~A~~~g~-~~~v~~Ll~~~~~~~~~~~---~d~~g~t~L~~A~~~~~~~~~----------~~v~~Ll~~g-~~~~~~~ 268 (373)
T 2fo1_E 204 HQAAANRD-FGMMVYMLNSTKLKGDIEE---LDRNGMTALMIVAHNEGRDQV----------ASAKLLVEKG-AKVDYDG 268 (373)
T ss_dssp HHHHHTTC-HHHHHHHTTSHHHHHTTSC---CCTTSCCHHHHHHHSCSTTHH----------HHHHHHHHHT-CCSSCCS
T ss_pred HHHHHCCC-HHHHHHHHhcCccccChhh---cCCCCCCHHHHHHHhCCcchH----------HHHHHHHHCC-CCccccc
Confidence 88899999 99999999988 78888 9999999999999988 78 9999999998 66664
Q ss_pred ------ccCCCChHHHHHHHcCCHHHHHHHHhcC-CccccccccCCCCchhhhhhcCCccc-ccccc--cccCccCCCCC
Q 039483 219 ------IDQCWWTPIHYAAYHRNYLILKLILKID-RTAAKIADKDRKMTALHLVHGPKGCQ-NNMLA--SSLMDEGDAKG 288 (360)
Q Consensus 219 ------~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~--~~~~~~~d~~g 288 (360)
.|..|+||||+|+..|+.+++++|++.+ +++ +.+|. .|+||||+|+..++.+ +++|+ +++++.+|..|
T Consensus 269 ~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~-n~~d~-~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g 346 (373)
T 2fo1_E 269 AARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNK-DKQDE-DGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATD 346 (373)
T ss_dssp GGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCT-TCCCT-TCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSS
T ss_pred ccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCc-cCcCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCC
Confidence 5779999999999999999999999776 899 99999 9999999999999999 88888 49999999999
Q ss_pred CcHHHHHHHcCCHHHHHHHhhhh
Q 039483 289 NTTVHFFAAVHRKEIFDDLSGRV 311 (360)
Q Consensus 289 ~Tpl~~A~~~~~~~i~~~l~~~~ 311 (360)
+||||+|+.+|+.++++.|.++.
T Consensus 347 ~t~l~~A~~~g~~~iv~~Ll~~~ 369 (373)
T 2fo1_E 347 HTARQLAQANNHHNIVDIFDRCR 369 (373)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHhcC
Confidence 99999999999999999998864
|
| >3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=269.61 Aligned_cols=223 Identities=21% Similarity=0.217 Sum_probs=196.3
Q ss_pred CCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHH
Q 039483 23 PQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLI 102 (360)
Q Consensus 23 ~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll 102 (360)
.+..++||.||+.|+.+.++.++.. . +..+ +.+|..|.|| ||+|+..|+.+++++|+
T Consensus 22 ~~~~~~L~~A~~~g~~~~v~~ll~~----~-----------------~~~~-~~~d~~g~t~-L~~A~~~g~~~~v~~Ll 78 (351)
T 3utm_A 22 EYKKDELLEAARSGNEEKLMALLTP----L-----------------NVNC-HASDGRKSTP-LHLAAGYNRVRIVQLLL 78 (351)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHCCT----T-----------------TTTC-CCSSTTCCCH-HHHHHHTTCHHHHHHHH
T ss_pred cccchhHHHHHHcCCHHHHHHHHHh----c-----------------CCCc-ccCCCCCCCH-HHHHHHcCCHHHHHHHH
Confidence 3456899999999999999999772 1 5566 8889999999 99999999999999999
Q ss_pred HhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcH
Q 039483 103 ERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQA 182 (360)
Q Consensus 103 ~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~ 182 (360)
++|++++. .|..|. ||||+|+..|+ .+++++|+++|++++. ++..|.||
T Consensus 79 ~~g~~~~~------------------~~~~g~---------t~L~~A~~~g~-~~iv~~Ll~~g~~~~~---~~~~g~t~ 127 (351)
T 3utm_A 79 QHGADVHA------------------KDKGGL---------VPLHNACSYGH-YEVTELLLKHGACVNA---MDLWQFTP 127 (351)
T ss_dssp HTTCCTTC------------------CCTTCC---------CHHHHHHHTTC-HHHHHHHHHTTCCTTC---CCTTCCCH
T ss_pred HcCCCCCc------------------cCCCCC---------cHHHHHHHCCC-HHHHHHHHHCCCCCCC---CCCCCCCH
Confidence 99999988 788885 77777888888 9999999999988888 88889999
Q ss_pred HHHHHhcCCcccccccCChHHHHHHHHhcCccccccc-------------------------------------------
Q 039483 183 LHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGI------------------------------------------- 219 (360)
Q Consensus 183 Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~------------------------------------------- 219 (360)
||+|+..|+. +++++|++.+ .+++..
T Consensus 128 L~~A~~~~~~----------~~v~~Ll~~g-~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (351)
T 3utm_A 128 LHEAASKNRV----------EVCSLLLSHG-ADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKK 196 (351)
T ss_dssp HHHHHHTTCH----------HHHHHHHHTT-CCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHcCCH----------HHHHHHHHcC-CCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHH
Confidence 9999999998 9999998887 444432
Q ss_pred -----------cCCCChHHHHHHHc---CCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-cccccc--ccCc
Q 039483 220 -----------DQCWWTPIHYAAYH---RNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLAS--SLMD 282 (360)
Q Consensus 220 -----------d~~g~t~Lh~A~~~---~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~~--~~~~ 282 (360)
+..|.||||+|+.. +..+++++|++.|+++ +.++. .|+||||+|+..++.+ +++|+. ++++
T Consensus 197 ~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n 274 (351)
T 3utm_A 197 TLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANV-NEKNK-DFMTPLHVAAERAHNDVMEVLHKHGAKMN 274 (351)
T ss_dssp HTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCT-TCCCT-TCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCc-CCcCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 35678999999999 5589999999999999 99999 9999999999999999 888884 8999
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHhhhhc
Q 039483 283 EGDAKGNTTVHFFAAVHRKEIFDDLSGRVK 312 (360)
Q Consensus 283 ~~d~~g~Tpl~~A~~~~~~~i~~~l~~~~~ 312 (360)
.+|..|+||||+|++.|+.++++.|+++..
T Consensus 275 ~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga 304 (351)
T 3utm_A 275 ALDSLGQTALHRAALAGHLQTCRLLLSYGS 304 (351)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred CcCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 999999999999999999999999998853
|
| >3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-34 Score=253.07 Aligned_cols=223 Identities=20% Similarity=0.210 Sum_probs=202.4
Q ss_pred CCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHH
Q 039483 23 PQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLI 102 (360)
Q Consensus 23 ~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll 102 (360)
.+..++|+.|++.|+.+.++.|++. +.++ +.++..|.|| ||+|+..|+.+++++|+
T Consensus 7 ~~~~~~l~~A~~~g~~~~~~~Ll~~----------------------g~~~-~~~~~~g~t~-L~~A~~~~~~~~v~~Ll 62 (240)
T 3eu9_A 7 DYSTWDIVKATQYGIYERCRELVEA----------------------GYDV-RQPDKENVTL-LHWAAINNRIDLVKYYI 62 (240)
T ss_dssp CGGGCCHHHHHHTTCHHHHHHHHHT----------------------TCCT-TCCCTTSCCH-HHHHHHTTCHHHHHHHH
T ss_pred cccchHHHHHHHcCChHHHHHHHHc----------------------CCCc-CCCCCCCCCH-HHHHHHhCCHHHHHHHH
Confidence 4455789999999999999999984 5666 8889999999 99999999999999999
Q ss_pred HhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcH
Q 039483 103 ERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQA 182 (360)
Q Consensus 103 ~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~ 182 (360)
++|++++. ..+..| .||||+|+..|+ .+++++|++.|++++. ++..|.||
T Consensus 63 ~~~~~~~~-----------------~~~~~~---------~t~L~~A~~~~~-~~~v~~Ll~~g~~~~~---~~~~g~t~ 112 (240)
T 3eu9_A 63 SKGAIVDQ-----------------LGGDLN---------STPLHWATRQGH-LSMVVQLMKYGADPSL---IDGEGCSC 112 (240)
T ss_dssp HTTCCTTC-----------------CBTTTT---------BCHHHHHHHHTC-HHHHHHHHHTTCCTTC---CCTTSCCH
T ss_pred HcCCcchh-----------------hcCCcC---------CChhHHHHHcCC-HHHHHHHHHcCCCCcc---cCCCCCCH
Confidence 99998876 244446 488888999999 9999999999999999 99999999
Q ss_pred HHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCC-HHHHHHHHhcCCccccccccCCCCch
Q 039483 183 LHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRN-YLILKLILKIDRTAAKIADKDRKMTA 261 (360)
Q Consensus 183 Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~-~~~v~~Ll~~g~~~~~~~d~~~g~tp 261 (360)
||+|+..|+. +++++|++.+ .+++..+..|.||||+|+..++ .+++++|++.|+++ +..+...|.||
T Consensus 113 l~~A~~~~~~----------~~~~~Ll~~~-~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~-~~~~~~~g~t~ 180 (240)
T 3eu9_A 113 IHLAAQFGHT----------SIVAYLIAKG-QDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSV-NLGDKYHKNTA 180 (240)
T ss_dssp HHHHHHTTCH----------HHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCT-TCCCTTTCCCH
T ss_pred HHHHHHcCHH----------HHHHHHHhcC-CCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCc-chhhccCCCcH
Confidence 9999999999 9999999998 7889999999999999997776 89999999999999 77775489999
Q ss_pred hhhhhcCCccc-cccccc--ccCccCCCCCCcHHHHHHHcCCHHHHHHHhhhh
Q 039483 262 LHLVHGPKGCQ-NNMLAS--SLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGRV 311 (360)
Q Consensus 262 Lh~A~~~~~~~-~~~L~~--~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~~ 311 (360)
||+|+..++.+ +++|+. ++++.+|..|+||+++|++.|+.++++.|.+..
T Consensus 181 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~ 233 (240)
T 3eu9_A 181 LHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEAR 233 (240)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhh
Confidence 99999999999 888884 899999999999999999999999999998875
|
| >1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-35 Score=265.92 Aligned_cols=219 Identities=18% Similarity=0.149 Sum_probs=192.0
Q ss_pred CCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHH
Q 039483 24 QIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIE 103 (360)
Q Consensus 24 ~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~ 103 (360)
...++||.||..|+.+.++.|++. +.++ +..|..|.|| ||+||..|+.+++++|++
T Consensus 39 ~~~t~l~~A~~~g~~~~v~~Ll~~----------------------g~~~-~~~~~~g~t~-L~~A~~~g~~~~v~~Ll~ 94 (299)
T 1s70_B 39 DDGAVFLAACSSGDTEEVLRLLER----------------------GADI-NYANVDGLTA-LHQACIDDNVDMVKFLVE 94 (299)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHH----------------------CCCT-TCBCTTCCBH-HHHHHHTTCHHHHHHHHH
T ss_pred CCccHHHHHHHcCCHHHHHHHHHc----------------------CCCC-cccCCCCCCH-HHHHHHcCCHHHHHHHHH
Confidence 346899999999999999999984 6677 8899999999 999999999999999999
Q ss_pred hccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHH
Q 039483 104 RAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQAL 183 (360)
Q Consensus 104 ~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~L 183 (360)
+|++++. .|..|. ||||+|+..|+ .+++++|+++|++++. ++..|.|||
T Consensus 95 ~ga~~~~------------------~~~~g~---------tpL~~A~~~g~-~~~v~~Ll~~g~~~~~---~~~~g~t~l 143 (299)
T 1s70_B 95 NGANINQ------------------PDNEGW---------IPLHAAASCGY-LDIAEYLISQGAHVGA---VNSEGDTPL 143 (299)
T ss_dssp TTCCTTC------------------CCTTSC---------CHHHHHHHHTC-HHHHHHHHHTTCCTTC---CCTTSCCHH
T ss_pred CCCCCCC------------------CCCCCC---------cHHHHHHHcCC-HHHHHHHHhCCCCCCC---cCCCCCCHH
Confidence 9999988 778875 78888889999 9999999999999999 999999999
Q ss_pred HHHHhcCCcccccccCChHHHHHHHHhcCccccc--------------------------cccCCCChHHHHHHHcCCHH
Q 039483 184 HAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIK--------------------------GIDQCWWTPIHYAAYHRNYL 237 (360)
Q Consensus 184 h~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~--------------------------~~d~~g~t~Lh~A~~~~~~~ 237 (360)
|+|+..++. ++++.++.....+++ ..+..|.||||+|+..|+.+
T Consensus 144 ~~A~~~~~~----------~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~ 213 (299)
T 1s70_B 144 DIAEEEAME----------ELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTE 213 (299)
T ss_dssp HHCCSHHHH----------HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHH
T ss_pred HHHHhcchH----------HHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHH
Confidence 999999998 888877755333322 24578999999999999999
Q ss_pred HHHHHHhcCCccccccccCCCCchhhhhhcCCccc-ccccc--cccCccCCCCCCcHHHHHHHcCCHHHHHHHhhh
Q 039483 238 ILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLA--SSLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGR 310 (360)
Q Consensus 238 ~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~--~~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~ 310 (360)
++++|+++|+++ +.+|. .|.||||+|+..++.+ +++|+ +++++.+|..|+||+|+|++. ..+.++.+.+.
T Consensus 214 ~v~~Ll~~g~d~-~~~d~-~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~-~~~~l~~l~~~ 286 (299)
T 1s70_B 214 VLKLLIQARYDV-NIKDY-DGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADED-ILGYLEELQKK 286 (299)
T ss_dssp HHHHHHTTTCCT-TCCCT-TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSG-GGHHHHHHHHH
T ss_pred HHHHHHHcCCCC-CCcCC-CCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHH-HHHHHHHHHHH
Confidence 999999999999 99999 9999999999999999 88888 489999999999999999754 34444444443
|
| >2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-34 Score=247.74 Aligned_cols=205 Identities=16% Similarity=0.159 Sum_probs=186.7
Q ss_pred cccc-ccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHH
Q 039483 61 SCIS-TSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHE 139 (360)
Q Consensus 61 ~~v~-l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~ 139 (360)
++++ |... +..+....|..|.|| ||+|+..|+.+++++|+++|++++. .|..|.
T Consensus 5 ~~i~~Ll~~-g~~~~~~~d~~g~t~-L~~A~~~g~~~~v~~Ll~~g~~~~~------------------~~~~g~----- 59 (223)
T 2f8y_A 5 AVISDFIYQ-GASLHNQTDRTGETA-LHLAARYSRSDAAKRLLEASADANI------------------QDNMGR----- 59 (223)
T ss_dssp CCEETTEET-TCCTTCCCTTTCCCH-HHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTSC-----
T ss_pred HHHHHHHHc-CCCcccccCCCCCch-HHHHHHcCCHHHHHHHHHcCCCCCC------------------cCCCCC-----
Confidence 4555 5555 566524458999999 9999999999999999999999987 777875
Q ss_pred hhhcCHHHHHHhcCCcHHHHHHHHhhCC-CCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCcccccc
Q 039483 140 AYNKIPLCMAAEYEHSSHTVVAILKSCT-SVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKG 218 (360)
Q Consensus 140 a~~~t~L~~A~~~g~~~~~~~~Ll~~g~-~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~ 218 (360)
||||+|+..|+ .+++++|++.+. +++. ++..|.||||+|+..++. +++++|++.+ .+++.
T Consensus 60 ----t~L~~A~~~~~-~~~v~~Ll~~~~~~~~~---~~~~g~t~L~~A~~~~~~----------~~~~~Ll~~g-~~~~~ 120 (223)
T 2f8y_A 60 ----TPLHAAVSADA-QGVFQILIRNRATDLDA---RMHDGTTPLILAARLAVE----------GMLEDLINSH-ADVNA 120 (223)
T ss_dssp ----CHHHHHHHTTC-HHHHHHHHHBTTSCTTC---CCTTCCCHHHHHHHHTCH----------HHHHHHHHTT-CCTTC
T ss_pred ----CHHHHHHHcCC-HHHHHHHHHcCCCCccc---CCCCCCcHHHHHHHhCcH----------HHHHHHHHcC-CCCcC
Confidence 88888899999 999999999987 7787 899999999999999999 9999999998 78999
Q ss_pred ccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-cccccc--ccCccCCCCCCcHHHHH
Q 039483 219 IDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLAS--SLMDEGDAKGNTTVHFF 295 (360)
Q Consensus 219 ~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~~--~~~~~~d~~g~Tpl~~A 295 (360)
.|..|+||||+|+..|+.+++++|+++|+++ +.++. .|.||||+|+..++.+ +++|+. ++++.+|..|.||+++|
T Consensus 121 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A 198 (223)
T 2f8y_A 121 VDDLGKSALHWAAAVNNVDAAVVLLKNGANK-DMQNN-REETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIA 198 (223)
T ss_dssp BCTTSCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-TCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCC-CCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHH
Confidence 9999999999999999999999999999999 99999 9999999999999998 888884 89999999999999999
Q ss_pred HHcCCHHHHHHHhhhh
Q 039483 296 AAVHRKEIFDDLSGRV 311 (360)
Q Consensus 296 ~~~~~~~i~~~l~~~~ 311 (360)
++.++.++++.|.++.
T Consensus 199 ~~~~~~~i~~~L~~~g 214 (223)
T 2f8y_A 199 QERMHHDIVRLLDEYN 214 (223)
T ss_dssp HHTTCHHHHHHHHHTT
T ss_pred HHhcchHHHHHHHHcC
Confidence 9999999999998874
|
| >3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=262.65 Aligned_cols=223 Identities=17% Similarity=0.159 Sum_probs=180.1
Q ss_pred CCCCCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHH
Q 039483 20 TSQPQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVS 99 (360)
Q Consensus 20 ~~~~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~ 99 (360)
.....+.+|||.||..|+.++++.|++. +.++ +.+|..|.|| ||+|+..|+.++++
T Consensus 53 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~----------------------g~~~-~~~~~~g~t~-L~~A~~~g~~~iv~ 108 (351)
T 3utm_A 53 ASDGRKSTPLHLAAGYNRVRIVQLLLQH----------------------GADV-HAKDKGGLVP-LHNACSYGHYEVTE 108 (351)
T ss_dssp CSSTTCCCHHHHHHHTTCHHHHHHHHHT----------------------TCCT-TCCCTTCCCH-HHHHHHTTCHHHHH
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHHc----------------------CCCC-CccCCCCCcH-HHHHHHCCCHHHHH
Confidence 3456688999999999999999999984 5556 7777777888 88888888888888
Q ss_pred HHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccc------
Q 039483 100 VLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIY------ 173 (360)
Q Consensus 100 ~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~------ 173 (360)
+|+++|++++. .|..|. ||||+|+..|+ .+++++|+++|++++...
T Consensus 109 ~Ll~~g~~~~~------------------~~~~g~---------t~L~~A~~~~~-~~~v~~Ll~~g~~~~~~~~~g~~~ 160 (351)
T 3utm_A 109 LLLKHGACVNA------------------MDLWQF---------TPLHEAASKNR-VEVCSLLLSHGADPTLVNCHGKSA 160 (351)
T ss_dssp HHHHTTCCTTC------------------CCTTCC---------CHHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred HHHHCCCCCCC------------------CCCCCC---------CHHHHHHHcCC-HHHHHHHHHcCCCCccccCCCCcc
Confidence 88888777776 555553 55555555666 666666666665554300
Q ss_pred ---------------------------------------------cCCCCCCcHHHHHHhcC---CcccccccCChHHHH
Q 039483 174 ---------------------------------------------MKAPMERQALHAATMHI---DLCKFNHTLSNDCAV 205 (360)
Q Consensus 174 ---------------------------------------------~~d~~g~t~Lh~A~~~~---~~~~~~~~~~~~~~~ 205 (360)
..+..|.||||+|+..+ .. +++
T Consensus 161 l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~----------~~~ 230 (351)
T 3utm_A 161 VDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRK----------QVA 230 (351)
T ss_dssp HHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHH----------HHH
T ss_pred hHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHH----------HHH
Confidence 03456789999999884 46 899
Q ss_pred HHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-ccccc--cccCc
Q 039483 206 QQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLA--SSLMD 282 (360)
Q Consensus 206 ~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~--~~~~~ 282 (360)
++|++.+ .+++.+|..|+||||+|+..|+.+++++|+++|+++ +.+|. .|+||||+|+..++.+ +++|+ +++++
T Consensus 231 ~~Ll~~g-~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-n~~d~-~g~t~L~~A~~~~~~~~v~~Ll~~gad~~ 307 (351)
T 3utm_A 231 ELLLRKG-ANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKM-NALDS-LGQTALHRAALAGHLQTCRLLLSYGSDPS 307 (351)
T ss_dssp HHHHHTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred HHHHHcC-CCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCC-CCCCHHHHHHHcCcHHHHHHHHHcCCCCC
Confidence 9999999 889999999999999999999999999999999999 99999 9999999999999999 89998 48999
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHhhhh
Q 039483 283 EGDAKGNTTVHFFAAVHRKEIFDDLSGRV 311 (360)
Q Consensus 283 ~~d~~g~Tpl~~A~~~~~~~i~~~l~~~~ 311 (360)
.+|..|+||+++| ..++++.|.+..
T Consensus 308 ~~~~~g~tal~~a----~~~~~~~l~~~~ 332 (351)
T 3utm_A 308 IISLQGFTAAQMG----NEAVQQILSEST 332 (351)
T ss_dssp CCCTTSCCHHHHS----CHHHHHHHHHC-
T ss_pred CcCCCCCChhhhh----hHHHHHHHHhcc
Confidence 9999999999998 566777666553
|
| >1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-34 Score=256.51 Aligned_cols=197 Identities=18% Similarity=0.134 Sum_probs=177.6
Q ss_pred CCCCCCCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCC
Q 039483 75 QPVTAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEH 154 (360)
Q Consensus 75 ~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~ 154 (360)
+.+|..|.|| ||+||..|+.++|++|+++|++.+. ++.+|..|. ||||+|+..|+
T Consensus 3 ~~~d~~g~t~-L~~A~~~g~~~~v~~Ll~~g~~~~~---------------~~~~~~~g~---------t~L~~A~~~g~ 57 (282)
T 1oy3_D 3 GYVTEDGDTA-LHLAVIHQHEPFLDFLLGFSAGHEY---------------LDLQNDLGQ---------TALHLAAILGE 57 (282)
T ss_dssp CCCCTTCCCH-HHHHHHTTCHHHHHHHHHHHTTSGG---------------GGCCCTTSC---------CHHHHHHHHTC
T ss_pred CccCCCCCcH-HHHHHHcCCHHHHHHHHhcCCCccc---------------ccccCCCCC---------CHHHHHHHcCC
Confidence 6789999999 9999999999999999999987321 223778885 88888899999
Q ss_pred cHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCcc--------------------
Q 039483 155 SSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKS-------------------- 214 (360)
Q Consensus 155 ~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~-------------------- 214 (360)
.+++++|+++|++++. ++..|.||||+|+..|+. +++++|++.+..
T Consensus 58 -~~~v~~Ll~~ga~~~~---~~~~g~tpL~~A~~~~~~----------~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (282)
T 1oy3_D 58 -ASTVEKLYAAGAGVLV---AERGGHTALHLACRVRAH----------TCACVLLQPRPSHPRDASDTYLTQSQDCTPDT 123 (282)
T ss_dssp -HHHHHHHHHTTCCSSC---CCTTSCCHHHHHTTTTCH----------HHHHHHSSSCCSSCCCC---------------
T ss_pred -HHHHHHHHHcCCCCCC---CCCCCCCHHHHHHHcCCc----------chhHhhhccCCCCchhhHHHHhhcccccCcch
Confidence 9999999999999999 999999999999999999 999999987622
Q ss_pred --------------------------ccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhhhcC
Q 039483 215 --------------------------MIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGP 268 (360)
Q Consensus 215 --------------------------~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~ 268 (360)
+++..+..|+||||+|+..|+.+++++|+++|+++ +..+...|+||||+|+..
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~~g~tpL~~A~~~ 202 (282)
T 1oy3_D 124 SHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADL-NKPEPTCGRTPLHLAVEA 202 (282)
T ss_dssp --------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTTCCCHHHHHHHT
T ss_pred hcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCcCHHHHHHHc
Confidence 36677889999999999999999999999999999 888852599999999999
Q ss_pred Cccc-ccccc--cccCccCCCCCCcHHHHHHHcCCHHHHHHHhhhh
Q 039483 269 KGCQ-NNMLA--SSLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGRV 311 (360)
Q Consensus 269 ~~~~-~~~L~--~~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~~ 311 (360)
++.+ +++|+ +++++.+|..|+||||+|++.|+.++++.|+++.
T Consensus 203 ~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g 248 (282)
T 1oy3_D 203 QAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHG 248 (282)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTT
T ss_pred CCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHHHHHHcC
Confidence 9999 88888 4999999999999999999999999999999875
|
| >3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-33 Score=252.92 Aligned_cols=218 Identities=17% Similarity=0.139 Sum_probs=200.0
Q ss_pred CCCCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHH
Q 039483 21 SQPQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSV 100 (360)
Q Consensus 21 ~~~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~ 100 (360)
....+.+|||.||..|+.++++.|++. +.++ +.+|..|.|| ||+|+..|+.+++++
T Consensus 55 ~~~~g~t~L~~Aa~~g~~~~v~~Ll~~----------------------g~~~-~~~~~~g~t~-L~~A~~~g~~~~v~~ 110 (285)
T 3d9h_A 55 DAVSDWSPMHEAAIHGHQLSLRNLISQ----------------------GWAV-NIITADHVSP-LHEACLGGHLSCVKI 110 (285)
T ss_dssp SSCCSCCHHHHHHHTTCHHHHHHHHHT----------------------TCCS-CEECTTCCCH-HHHHHHTTCHHHHHH
T ss_pred CCccCCCHHHHHHHcCCHHHHHHHHHC----------------------CCCC-CCcCCCCCCH-HHHHHHCCcHHHHHH
Confidence 456678999999999999999999984 5667 8899999999 999999999999999
Q ss_pred HHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCC
Q 039483 101 LIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMER 180 (360)
Q Consensus 101 Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~ 180 (360)
|+++|++++. .|..|. ||||+|+..|+ .+++++|++.|++++. . ..|.
T Consensus 111 Ll~~ga~~~~------------------~~~~g~---------t~L~~A~~~~~-~~~v~~Ll~~g~~~~~---~-~~g~ 158 (285)
T 3d9h_A 111 LLKHGAQVNG------------------VTADWH---------TPLFNACVSGS-WDCVNLLLQHGASVQP---E-SDLA 158 (285)
T ss_dssp HHHTTCCSSC------------------CCTTCC---------CHHHHHHHHTC-HHHHHHHHHTTCCSSC---S-CTTS
T ss_pred HHHCCCCCCC------------------CCCCCC---------CHHHHHHHcCH-HHHHHHHHHCCCCCCC---C-CCCC
Confidence 9999999988 788885 78888889999 9999999999999876 3 4599
Q ss_pred cHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCc
Q 039483 181 QALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMT 260 (360)
Q Consensus 181 t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~t 260 (360)
||||+|+..|+. +++++|++.+ .+++..|..|+||||+|+..|+.+++++|++.|+++ +. +. .|+|
T Consensus 159 t~L~~A~~~g~~----------~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~-~~-~g~t 224 (285)
T 3d9h_A 159 SPIHEAARRGHV----------ECVNSLIAYG-GNIDHKISHLGTPLYLACENQQRACVKKLLESGADV-NQ-GK-GQDS 224 (285)
T ss_dssp CHHHHHHHHTCH----------HHHHHHHHTT-CCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCT-TC-CB-TTBC
T ss_pred CHHHHHHHcCCH----------HHHHHHHHCC-CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCC-CC-CC-CCCC
Confidence 999999999999 9999999999 789999999999999999999999999999999999 74 77 9999
Q ss_pred hhhhhhcCCccc-ccccc--cccCccCCCCCCcHHHHHHHcCCHHHHHHHhhh
Q 039483 261 ALHLVHGPKGCQ-NNMLA--SSLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGR 310 (360)
Q Consensus 261 pLh~A~~~~~~~-~~~L~--~~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~ 310 (360)
|||+|+..++.+ +++|+ +++++.+|..|+||||+|+ ++.++++.|+++
T Consensus 225 ~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~ 275 (285)
T 3d9h_A 225 PLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVP--PESPLAQLFLER 275 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSC--TTSHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhc--CccHHHHHHHHh
Confidence 999999999999 88888 4999999999999999999 567899988887
|
| >4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-32 Score=255.57 Aligned_cols=251 Identities=16% Similarity=0.054 Sum_probs=203.5
Q ss_pred CCCCHHHHHHHHcCChHHHHHHHHHHHhhh-hcccCCc----------ccccc-ccccccccccCCCCCCCCChHHHHHH
Q 039483 23 PQIDPNLFKVAAAGNLEPFKDMAREVIESL-LTARSRT----------QSCIS-TSNCRRQKMCQPVTAKGDTRSRHVAA 90 (360)
Q Consensus 23 ~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~-~~~~~~t----------~~~v~-l~~~~~~~~~~~~~~~g~tp~Lh~A~ 90 (360)
..+.||||.||+.|+.++++.|++.+.+.. .+..+.+ ..++. +... +.++ +.+|..|.|| ||+|+
T Consensus 57 ~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~d~~g~t~-l~~A~ 133 (337)
T 4g8k_A 57 EGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSK-GADV-NECDFYGFTA-FMEAA 133 (337)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTT-TCCT-TCBCTTCCBH-HHHHH
T ss_pred CCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhc-cchh-hhhccCCCCH-HHHHH
Confidence 347899999999999999999999543221 1222222 23333 5566 7888 9999999999 99999
Q ss_pred hcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHh-hCCCC
Q 039483 91 KFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILK-SCTSV 169 (360)
Q Consensus 91 ~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~-~g~~~ 169 (360)
..|+.+++++|+++|++++..+... ......+..|. ||||+|+..|+ .+++++|++ .|+++
T Consensus 134 ~~~~~~~~~~ll~~ga~~~~~~~~~--------~~~~~~~~~g~---------T~L~~A~~~g~-~~~v~~LL~~~gad~ 195 (337)
T 4g8k_A 134 VYGKVKALKFLYKRGANVNLRRKTK--------EDQERLRKGGA---------TALMDAAEKGH-VEVLKILLDEMGADV 195 (337)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCCCC-------------CTTCSC---------CHHHHHHHHTC-HHHHHHHHHHSCCCT
T ss_pred HcCcHHHHHHHHHcCCCcchhhccc--------cccccccCCCC---------cHHHHHHHCCC-HHHHHHHHhccCCCc
Confidence 9999999999999999987633221 11223455564 88888999999 999999996 59999
Q ss_pred CccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHh-cCCc
Q 039483 170 SHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILK-IDRT 248 (360)
Q Consensus 170 ~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~-~g~~ 248 (360)
+. +|..|.|++|+++..+.. .....++++|++++ ++++.+|..|+||||+|+..|+.+++++|++ .|++
T Consensus 196 n~---~d~~g~t~l~~~~~~~~~------~~~~~i~~lLl~~g-ad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~ 265 (337)
T 4g8k_A 196 NA---CDNMGRNALIHALLSSDD------SDVEAITHLLLDHG-ADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIE 265 (337)
T ss_dssp TC---CCTTSCCHHHHHHHHSCT------TTHHHHHHHHHHTT-CCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCC
T ss_pred Cc---cCCCCCcHHHHHHHHcCc------ccHHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCc
Confidence 99 999999999988766543 01126889999998 8899999999999999999999999999996 4889
Q ss_pred cccccccCCCCchhhhhhcCCccc-cccccc--ccCccCCCCCCcHHHHHHHcCCHHHHHHHhhhh
Q 039483 249 AAKIADKDRKMTALHLVHGPKGCQ-NNMLAS--SLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGRV 311 (360)
Q Consensus 249 ~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~~--~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~~ 311 (360)
+ +.+|. .|+||||+|+..++.+ +++|+. ++++ +.||||+|++.|+.++++.|+++.
T Consensus 266 v-n~~d~-~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n-----~~~~L~~A~~~~~~~iv~~Ll~~G 324 (337)
T 4g8k_A 266 I-NDTDS-DGKTALLLAVELKLKKIAELLCKRGASTD-----CGDLVMTARRNYDHSLVKVLLSHG 324 (337)
T ss_dssp T-TCBCT-TSCBHHHHHHHTTCHHHHHHHHTTSCSST-----TCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred c-cCcCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCC-----CCCHHHHHHHcCCHHHHHHHHHCc
Confidence 9 99999 9999999999999999 999985 6555 456999999999999999999874
|
| >3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-33 Score=243.34 Aligned_cols=195 Identities=21% Similarity=0.260 Sum_probs=183.5
Q ss_pred CCCCCCCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCC
Q 039483 75 QPVTAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEH 154 (360)
Q Consensus 75 ~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~ 154 (360)
+.+|..|.|| ||+||..|+.+++++|+++|++++. .+..|. ||||.|+..|+
T Consensus 5 ~~~~~~g~t~-L~~A~~~g~~~~v~~Ll~~g~~~~~------------------~~~~g~---------t~L~~A~~~~~ 56 (237)
T 3b7b_A 5 KMEHQNKRSP-LHAAAEAGHVDICHMLVQAGANIDT------------------CSEDQR---------TPLMEAAENNH 56 (237)
T ss_dssp CCSSCCSCCH-HHHHHHHTCHHHHHHHHHTTCCTTC------------------CCTTCC---------CHHHHHHHTTC
T ss_pred ccccCCCCCH-HHHHHHcCcHHHHHHHHHcCCCcCc------------------cCCCCC---------CHHHHHHHhCC
Confidence 7788999999 9999999999999999999999987 777775 88888899999
Q ss_pred cHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcC
Q 039483 155 SSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHR 234 (360)
Q Consensus 155 ~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~ 234 (360)
.+++++|++.|++++. ++..|.||||+|+..|+. +++++|++.++.+++..+..|+||||+|+..+
T Consensus 57 -~~~v~~Ll~~g~~~~~---~~~~g~t~L~~A~~~~~~----------~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~ 122 (237)
T 3b7b_A 57 -LEAVKYLIKAGALVDP---KDAEGSTCLHLAAKKGHY----------EVVQYLLSNGQMDVNCQDDGGWTPMIWATEYK 122 (237)
T ss_dssp -HHHHHHHHTTTCCCCC---CCTTSCCHHHHHHHTTCH----------HHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTT
T ss_pred -HHHHHHHHhCCCCCCC---CCCCCCcHHHHHHHcCCH----------HHHHHHHhCCCCCcccCCCCCCCHHHHHHHcC
Confidence 9999999999999999 999999999999999999 99999999987889999999999999999999
Q ss_pred CHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-cccccc--ccCccCCCCCCcHHHHHHHcCCHHHHHHHhhhh
Q 039483 235 NYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLAS--SLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGRV 311 (360)
Q Consensus 235 ~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~~--~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~~ 311 (360)
+.+++++|++.|+++ +.++. .|.||||+|+..++.+ +++|+. ++++.+|..|+||||+|++.++.++++.|.++.
T Consensus 123 ~~~~~~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 200 (237)
T 3b7b_A 123 HVDLVKLLLSKGSDI-NIRDN-EENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRD 200 (237)
T ss_dssp CHHHHHHHHHTTCCT-TCCCT-TSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTT
T ss_pred CHHHHHHHHHCCCCC-CccCC-CCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcC
Confidence 999999999999999 99999 9999999999999988 888884 899999999999999999999999999999875
Q ss_pred cc
Q 039483 312 KA 313 (360)
Q Consensus 312 ~~ 313 (360)
..
T Consensus 201 ad 202 (237)
T 3b7b_A 201 SD 202 (237)
T ss_dssp CC
T ss_pred CC
Confidence 33
|
| >2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-33 Score=245.06 Aligned_cols=190 Identities=17% Similarity=0.181 Sum_probs=171.7
Q ss_pred CCCChHHHHHHhcCCHHHHHHHHHh-ccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHH
Q 039483 80 KGDTRSRHVAAKFDHCDIVSVLIER-AKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHT 158 (360)
Q Consensus 80 ~g~tp~Lh~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~ 158 (360)
.|+|| ||+|+..|+.+++++|++. |++++. +|..|. ||||+|+..|+ .++
T Consensus 2 ~g~t~-L~~A~~~g~~~~v~~Ll~~~g~~~~~------------------~~~~g~---------t~L~~A~~~g~-~~~ 52 (232)
T 2rfa_A 2 IWESP-LLLAAKENDVQALSKLLKFEGCEVHQ------------------RGAMGE---------TALHIAALYDN-LEA 52 (232)
T ss_dssp CTTCH-HHHHHHTTCHHHHHHHHTTTCSCTTC------------------CCTTSC---------CHHHHHHHTTC-HHH
T ss_pred CCCCH-HHHHHHcCCHHHHHHHHHhcCCCccc------------------CCCCCC---------CHHHHHHHcCC-HHH
Confidence 48999 9999999999999999998 999888 788885 88888899999 999
Q ss_pred HHHHHhhCCCC-----CccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccC------------
Q 039483 159 VVAILKSCTSV-----SHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQ------------ 221 (360)
Q Consensus 159 ~~~Ll~~g~~~-----~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~------------ 221 (360)
+++|++.|+++ +. +|..|.||||+|+..|+. +++++|++.+ .+++..+.
T Consensus 53 v~~Ll~~~~~~~~~~~~~---~~~~g~t~L~~A~~~~~~----------~~v~~Ll~~g-~~~~~~~~~~~~~~~~~~~~ 118 (232)
T 2rfa_A 53 AMVLMEAAPELVFEPMTS---ELYEGQTALHIAVINQNV----------NLVRALLARG-ASVSARATGSVFHYRPHNLI 118 (232)
T ss_dssp HHHHHHHCGGGGGCCCCS---TTTTTCCHHHHHHHTTCH----------HHHHHHHHTT-CCTTCCCCSGGGSCCTTCSC
T ss_pred HHHHHHcCchhccccccc---cCCCCcCHHHHHHHcCCH----------HHHHHHHhCC-CCCCcccCCcceeecccccc
Confidence 99999999876 44 778999999999999999 9999999998 77777654
Q ss_pred -CCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-c----ccccc--ccC------ccCCCC
Q 039483 222 -CWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-N----NMLAS--SLM------DEGDAK 287 (360)
Q Consensus 222 -~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~----~~L~~--~~~------~~~d~~ 287 (360)
.|+||||+|+..|+.+++++|+++|+++ +.+|. .|+||||+|+..++.+ + ++|+. ++. +.+|..
T Consensus 119 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~-~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~ 196 (232)
T 2rfa_A 119 YYGEHPLSFAACVGSEEIVRLLIEHGADI-RAQDS-LGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQ 196 (232)
T ss_dssp CCCSSHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT-TSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTT
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCC-CCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCC
Confidence 7999999999999999999999999999 99999 9999999999999888 5 77774 444 588999
Q ss_pred CCcHHHHHHHcCCHHHHHHHhhhhccc
Q 039483 288 GNTTVHFFAAVHRKEIFDDLSGRVKAT 314 (360)
Q Consensus 288 g~Tpl~~A~~~~~~~i~~~l~~~~~~~ 314 (360)
|+||||+|++.|+.++++.|+++....
T Consensus 197 g~tpl~~A~~~g~~~~v~~Ll~~g~~~ 223 (232)
T 2rfa_A 197 GLTPFKLAGVEGNIVMFQHLMQKRKHI 223 (232)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcCccc
Confidence 999999999999999999999986443
|
| >1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-32 Score=248.62 Aligned_cols=205 Identities=19% Similarity=0.121 Sum_probs=182.6
Q ss_pred CCCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHH
Q 039483 22 QPQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVL 101 (360)
Q Consensus 22 ~~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~L 101 (360)
...+.+|||.|++.|+.++++.|++. +..+ +.+|..|.|| ||+|+..|+.+++++|
T Consensus 36 ~~~g~t~L~~A~~~g~~~~v~~Ll~~----------------------g~~~-~~~~~~g~t~-L~~A~~~~~~~~v~~L 91 (285)
T 1wdy_A 36 EEGGWTPLHNAVQMSREDIVELLLRH----------------------GADP-VLRKKNGATP-FLLAAIAGSVKLLKLF 91 (285)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHT----------------------TCCT-TCCCTTCCCH-HHHHHHHTCHHHHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHc----------------------CCCC-cccCCCCCCH-HHHHHHcCCHHHHHHH
Confidence 45577999999999999999999984 5555 6777788888 8888888888888888
Q ss_pred HHhccccCcccccccccchhhHHHhhcccCCCCchHHHhh-h---------------------------------cCHHH
Q 039483 102 IERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAY-N---------------------------------KIPLC 147 (360)
Q Consensus 102 l~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~-~---------------------------------~t~L~ 147 (360)
+++|++++. .|..|.||||+|+ + .||||
T Consensus 92 l~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~ 153 (285)
T 1wdy_A 92 LSKGADVNE------------------CDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALM 153 (285)
T ss_dssp HHTTCCTTC------------------BCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHH
T ss_pred HHcCCCCCc------------------cCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHH
Confidence 888888776 6777777777777 2 38999
Q ss_pred HHHhcCCcHHHHHHHHhh-CCCCCccccCCCCCCcHHHHHHhcCC----cccccccCChHHHHHHHHhcCccccccccCC
Q 039483 148 MAAEYEHSSHTVVAILKS-CTSVSHIYMKAPMERQALHAATMHID----LCKFNHTLSNDCAVQQLFEGKKSMIKGIDQC 222 (360)
Q Consensus 148 ~A~~~g~~~~~~~~Ll~~-g~~~~~~~~~d~~g~t~Lh~A~~~~~----~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~ 222 (360)
.|+..|+ .+++++|++. |.+++. ++..|.||||+|+..++ . +++++|++.+ .+++.+|..
T Consensus 154 ~A~~~~~-~~~v~~Ll~~~~~~~~~---~~~~g~t~l~~a~~~~~~~~~~----------~i~~~Ll~~g-~~~~~~~~~ 218 (285)
T 1wdy_A 154 DAAEKGH-VEVLKILLDEMGADVNA---CDNMGRNALIHALLSSDDSDVE----------AITHLLLDHG-ADVNVRGER 218 (285)
T ss_dssp HHHHHTC-HHHHHHHHHTSCCCTTC---CCTTSCCHHHHHHHCSCTTTHH----------HHHHHHHHTT-CCSSCCCTT
T ss_pred HHHHcCC-HHHHHHHHHhcCCCCCc---cCCCCCCHHHHHHHccccchHH----------HHHHHHHHcC-CCCCCcCCC
Confidence 9999999 9999999998 999999 99999999999999999 7 9999999999 889999999
Q ss_pred CChHHHHHHHcCCHHHHHHHHh-cCCccccccccCCCCchhhhhhcCCccc-cccccc--ccCccCC
Q 039483 223 WWTPIHYAAYHRNYLILKLILK-IDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLAS--SLMDEGD 285 (360)
Q Consensus 223 g~t~Lh~A~~~~~~~~v~~Ll~-~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~~--~~~~~~d 285 (360)
|+||||+|+..|+.+++++|++ .|+++ +.+|. .|+||||+|+..++.+ +++|+. ++++.+|
T Consensus 219 g~t~L~~A~~~~~~~~v~~Ll~~~g~~~-~~~~~-~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~d 283 (285)
T 1wdy_A 219 GKTPLILAVEKKHLGLVQRLLEQEHIEI-NDTDS-DGKTALLLAVELKLKKIAELLCKRGASTDCGD 283 (285)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHSSSCCT-TCCCT-TSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSS
T ss_pred CCcHHHHHHHcCCHHHHHHHHhccCCCc-cccCC-CCCcHHHHHHHcCcHHHHHHHHHcCCCCCccc
Confidence 9999999999999999999998 89999 99999 9999999999999999 899984 8887776
|
| >1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-34 Score=253.19 Aligned_cols=197 Identities=18% Similarity=0.143 Sum_probs=150.1
Q ss_pred cccCCCCCCCCChHHHHHHhcC-------------CHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHH
Q 039483 72 KMCQPVTAKGDTRSRHVAAKFD-------------HCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLH 138 (360)
Q Consensus 72 ~~~~~~~~~g~tp~Lh~A~~~g-------------~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh 138 (360)
++ +.+|.+|.|| ||+|+..| +.+++++|+++|++++. ..|..|.
T Consensus 2 dv-n~~d~~g~tp-L~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~-----------------~~d~~g~---- 58 (253)
T 1yyh_A 2 DV-NVRGPDGFTP-LMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHN-----------------QTDRTGE---- 58 (253)
T ss_dssp ---------------------------------------------------------------------CCCTTSC----
T ss_pred CC-CCCCCCCCcH-HHHHHhccccccccchhhcCCChHHHHHHHHccCCccc-----------------ccCCCCC----
Confidence 35 7789999999 99999988 89999999999998865 2577775
Q ss_pred HhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCcccccc
Q 039483 139 EAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKG 218 (360)
Q Consensus 139 ~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~ 218 (360)
||||+|+..|+ .+++++|+++|++++. ++..|.||||+|+..|+. +++++|++.+..+++.
T Consensus 59 -----t~L~~A~~~g~-~~~v~~Ll~~g~~~~~---~~~~g~t~L~~A~~~~~~----------~~v~~Ll~~~~~~~~~ 119 (253)
T 1yyh_A 59 -----TALHLAARYSR-SDAAKRLLEASADANI---QDNMGRTPLHAAVSADAQ----------GVFQILIRNRATDLDA 119 (253)
T ss_dssp -----CHHHHHHHTTC-HHHHHHHHHTTCCTTC---CCTTSCCHHHHHHHHTCH----------HHHHHHHHSTTSCTTC
T ss_pred -----cHHHHHHHcCC-HHHHHHHHHcCCCCCC---CCCCCCCHHHHHHHcCCH----------HHHHHHHHcCCCCccc
Confidence 88888899999 9999999999999999 999999999999999999 9999999998668999
Q ss_pred ccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-cccccc--ccCccCCCCCCcHHHHH
Q 039483 219 IDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLAS--SLMDEGDAKGNTTVHFF 295 (360)
Q Consensus 219 ~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~~--~~~~~~d~~g~Tpl~~A 295 (360)
.+..|+||||+|+..|+.+++++|++.|+++ +.++. .|+||||+|+..++.+ +++|+. ++++.+|..|+||||+|
T Consensus 120 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A 197 (253)
T 1yyh_A 120 RMHDGTTPLILAARLAVEGMLEDLINSHADV-NAVDD-LGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLA 197 (253)
T ss_dssp CCTTCCCHHHHHHHHTCSSHHHHHHHTTCCT-TCBCT-TSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred cCCCCCcHHHHHHHcChHHHHHHHHHcCCCC-CCcCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 9999999999999999999999999999999 99999 9999999999999998 888884 89999999999999999
Q ss_pred HHcCCHHHHHHHhhhhc
Q 039483 296 AAVHRKEIFDDLSGRVK 312 (360)
Q Consensus 296 ~~~~~~~i~~~l~~~~~ 312 (360)
++.|+.++++.|+++..
T Consensus 198 ~~~~~~~~v~~Ll~~ga 214 (253)
T 1yyh_A 198 AREGSYETAKVLLDHFA 214 (253)
T ss_dssp HHHTCHHHHHHHHHTTC
T ss_pred HHCCCHHHHHHHHHcCC
Confidence 99999999999998853
|
| >1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-32 Score=240.83 Aligned_cols=193 Identities=16% Similarity=0.125 Sum_probs=175.8
Q ss_pred CCCCCCCCChHHHHHHhcCCHHHHHHHHH----hccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHH
Q 039483 75 QPVTAKGDTRSRHVAAKFDHCDIVSVLIE----RAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAA 150 (360)
Q Consensus 75 ~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~----~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~ 150 (360)
+.+|.+|.|| ||+||..|+.+++++|++ .|.+++. .|..|. ||||+|+
T Consensus 3 ~~~d~~g~t~-L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~------------------~~~~g~---------t~L~~A~ 54 (241)
T 1k1a_A 3 TRADEDGDTP-LHIAVVQGNLPAVHRLVNLFQQGGRELDI------------------YNNLRQ---------TPLHLAV 54 (241)
T ss_dssp ----CTTCCH-HHHHHHTTCHHHHHHHHHHHHHTTCCSCC------------------CCTTSC---------CHHHHHH
T ss_pred cccCCCCCcH-HHHHHHcCCHHHHHHHHHHHHhcCCCCCc------------------ccccCC---------CHHHHHH
Confidence 6789999999 999999999999999997 6788877 777875 8888889
Q ss_pred hcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCc---cccccccCCCChHH
Q 039483 151 EYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKK---SMIKGIDQCWWTPI 227 (360)
Q Consensus 151 ~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~---~~i~~~d~~g~t~L 227 (360)
..|+ .+++++|++.|++++. ++..|.||||+|+..++. +++++|++.+. .+++..+..|+|||
T Consensus 55 ~~~~-~~~v~~Ll~~g~~~~~---~~~~g~t~l~~A~~~~~~----------~~~~~Ll~~~~~~~~~~~~~~~~g~t~L 120 (241)
T 1k1a_A 55 ITTL-PSVVRLLVTAGASPMA---LDRHGQTAAHLACEHRSP----------TCLRALLDSAAPGTLDLEARNYDGLTAL 120 (241)
T ss_dssp HTTC-HHHHHHHHHTTCCTTC---CCTTSCCHHHHHHHTTCH----------HHHHHHHHHSCTTSCCTTCCCTTSCCHH
T ss_pred HcCC-HHHHHHHHHcCCCccc---cCCCCCCHHHHHHHcCCH----------HHHHHHHHcCCCccccccccCcCCCcHH
Confidence 9999 9999999999999999 999999999999999999 99999999983 26788899999999
Q ss_pred HHHHHcCCHHHHHHHHhcCCccccccc-cCCCCchhhhhhcCCccc-cccccc--ccCccCCCCCCcHHHHHHHcCCHHH
Q 039483 228 HYAAYHRNYLILKLILKIDRTAAKIAD-KDRKMTALHLVHGPKGCQ-NNMLAS--SLMDEGDAKGNTTVHFFAAVHRKEI 303 (360)
Q Consensus 228 h~A~~~~~~~~v~~Ll~~g~~~~~~~d-~~~g~tpLh~A~~~~~~~-~~~L~~--~~~~~~d~~g~Tpl~~A~~~~~~~i 303 (360)
|+|+..|+.+++++|++.|+++ +..+ . .|.||||+|+..++.+ +++|+. ++++.+|..|+||||+|++.|+.++
T Consensus 121 ~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 198 (241)
T 1k1a_A 121 HVAVNTECQETVQLLLERGADI-DAVDIK-SGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPL 198 (241)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCT-TCCCTT-TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCc-cccccc-CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHH
Confidence 9999999999999999999999 8888 6 8999999999999998 888884 8999999999999999999999999
Q ss_pred HHHHhhhh
Q 039483 304 FDDLSGRV 311 (360)
Q Consensus 304 ~~~l~~~~ 311 (360)
++.|+++.
T Consensus 199 v~~Ll~~g 206 (241)
T 1k1a_A 199 VRTLVRSG 206 (241)
T ss_dssp HHHHHHTT
T ss_pred HHHHHhcC
Confidence 99999875
|
| >2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-33 Score=265.65 Aligned_cols=195 Identities=20% Similarity=0.186 Sum_probs=177.2
Q ss_pred cccCCCC-CCCCChHHHHHHhcCCHHHHHHHH--------HhccccCcccccccccchhhHHHhhcccCCCCchHHHhhh
Q 039483 72 KMCQPVT-AKGDTRSRHVAAKFDHCDIVSVLI--------ERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYN 142 (360)
Q Consensus 72 ~~~~~~~-~~g~tp~Lh~A~~~g~~~~v~~Ll--------~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~ 142 (360)
.+ +..| ..|.|| ||+||..|+.+++++|+ +.|++++. +|..|.
T Consensus 116 ~~-n~~d~~~g~t~-Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~------------------~d~~g~-------- 167 (373)
T 2fo1_E 116 SV-NIIDPRHNRTV-LHWIASNSSAEKSEDLIVHEAKECIAAGADVNA------------------MDCDEN-------- 167 (373)
T ss_dssp TT-TTCCCSSCCCH-HHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTC------------------CCTTSC--------
T ss_pred cc-cccCCcCCCCH-HHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcC------------------CCCCCC--------
Confidence 45 6677 689999 99999999998877776 78999888 788885
Q ss_pred cCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCc--ccccccc
Q 039483 143 KIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKK--SMIKGID 220 (360)
Q Consensus 143 ~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~--~~i~~~d 220 (360)
||||+|+..|+ .+++++|+++|++++. ++..|.||||+|+..|+. +++++|++.+. .+++..|
T Consensus 168 -TpL~~A~~~g~-~~iv~~Ll~~ga~~~~---~~~~g~t~L~~A~~~g~~----------~~v~~Ll~~~~~~~~~~~~d 232 (373)
T 2fo1_E 168 -TPLMLAVLARR-RRLVAYLMKAGADPTI---YNKSERSALHQAAANRDF----------GMMVYMLNSTKLKGDIEELD 232 (373)
T ss_dssp -CHHHHHHHHTC-HHHHHHHHHTTCCSCC---CCTTCCCHHHHHHHTTCH----------HHHHHHTTSHHHHHTTSCCC
T ss_pred -CHHHHHHHcCh-HHHHHHHHHCCCCCcc---cCCCCCCHHHHHHHCCCH----------HHHHHHHhcCccccChhhcC
Confidence 88888899999 9999999999999999 999999999999999999 99999998863 5788899
Q ss_pred CCCChHHHHHHHcC---CHHHHHHHHhcCCccccc--------cccCCCCchhhhhhcCCccc-ccccc---cccCccCC
Q 039483 221 QCWWTPIHYAAYHR---NYLILKLILKIDRTAAKI--------ADKDRKMTALHLVHGPKGCQ-NNMLA---SSLMDEGD 285 (360)
Q Consensus 221 ~~g~t~Lh~A~~~~---~~~~v~~Ll~~g~~~~~~--------~d~~~g~tpLh~A~~~~~~~-~~~L~---~~~~~~~d 285 (360)
..|+||||+|+..+ +.+++++|++.|+++ +. .+. .|.||||+|+..++.+ +++|+ +++++.+|
T Consensus 233 ~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~-~~~~~~~~~~~d~-~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d 310 (373)
T 2fo1_E 233 RNGMTALMIVAHNEGRDQVASAKLLVEKGAKV-DYDGAARKDSEKY-KGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQD 310 (373)
T ss_dssp TTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCS-SCCSGGGTSSSSC-CCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCC
T ss_pred CCCCCHHHHHHHhCCcchHHHHHHHHHCCCCc-ccccccccCcccc-cCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcC
Confidence 99999999999998 899999999999998 65 566 8999999999999999 88988 38999999
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHhhhh
Q 039483 286 AKGNTTVHFFAAVHRKEIFDDLSGRV 311 (360)
Q Consensus 286 ~~g~Tpl~~A~~~~~~~i~~~l~~~~ 311 (360)
..|+||||+|++.|+.++++.|+++.
T Consensus 311 ~~g~TpL~~A~~~g~~~iv~~Ll~~g 336 (373)
T 2fo1_E 311 EDGKTPIMLAAQEGRIEVVMYLIQQG 336 (373)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 99999999999999999999999874
|
| >3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-33 Score=252.04 Aligned_cols=216 Identities=13% Similarity=0.086 Sum_probs=180.2
Q ss_pred CCCCCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHH
Q 039483 20 TSQPQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVS 99 (360)
Q Consensus 20 ~~~~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~ 99 (360)
.....+.+|||.||..|+.++++.|++. +.++ +.. +|.|| ||+|+..|+.++++
T Consensus 26 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~----------------------g~~~-~~~--~g~t~-L~~A~~~g~~~~v~ 79 (285)
T 3kea_A 26 KADVHGHSASYYAIADNNVRLVCTLLNA----------------------GALK-NLL--ENEFP-LHQAATLEDTKIVK 79 (285)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHT----------------------TGGG-SCC--TTCCH-HHHHTTSSSCHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHhC----------------------CCCC-CCC--CCCCH-HHHHHHcCCHHHHH
Confidence 3346677899999999999999999884 3344 444 48899 99999999999999
Q ss_pred HHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCC
Q 039483 100 VLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPME 179 (360)
Q Consensus 100 ~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g 179 (360)
+|+++|++++. +|..|. ||||+|+..|+ .+++++|+++|++++. ++..|
T Consensus 80 ~Ll~~ga~~~~------------------~d~~g~---------t~L~~A~~~g~-~~~v~~Ll~~ga~~~~---~~~~g 128 (285)
T 3kea_A 80 ILLFSGLDDSQ------------------FDDKGN---------TALYYAVDSGN-MQTVKLFVKKNWRLMF---YGKTG 128 (285)
T ss_dssp HHHHTTCCTTC------------------CCTTSC---------CHHHHHHHTTC-HHHHHHHHHHCGGGGG---CSSSG
T ss_pred HHHHCCCCCCC------------------cCCCCC---------cHHHHHHHcCC-HHHHHHHHhcCCCCCc---cCCCC
Confidence 99999998887 777775 77788888899 9999999999999988 88888
Q ss_pred -CcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccC-CCChHHHHHHHcCCHHHHHHHHhcCCccccccccCC
Q 039483 180 -RQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQ-CWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDR 257 (360)
Q Consensus 180 -~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~-~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~ 257 (360)
.||||+|+..|+. +++++|++.++. . .+. .|+||||+|+..|+.+++++|+++|+++ +.++. .
T Consensus 129 ~~t~L~~A~~~~~~----------~~v~~Ll~~g~~-~--~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~-n~~~~-~ 193 (285)
T 3kea_A 129 WKTSFYHAVMLNDV----------SIVSYFLSEIPS-T--FDLAILLSCIHITIKNGHVDMMILLLDYMTST-NTNNS-L 193 (285)
T ss_dssp GGSHHHHHHHTTCH----------HHHHHHHTTSCT-T--CCCSTHHHHHHHHHHTTCHHHHHHHHHHHHHT-CTTCC-C
T ss_pred CCCHHHHHHHcCCH----------HHHHHHHhCCCc-c--ccccCCccHHHHHHHcChHHHHHHHHHcCCCC-CcccC-C
Confidence 7999999999999 999999998833 2 333 8889999999999999999999999998 99998 9
Q ss_pred CCch-hhhhhcCCccc-cccccc--ccCccCCCCCCcHHHHHHHcCCHHHHHHHhhhhccc
Q 039483 258 KMTA-LHLVHGPKGCQ-NNMLAS--SLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGRVKAT 314 (360)
Q Consensus 258 g~tp-Lh~A~~~~~~~-~~~L~~--~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~~~~~ 314 (360)
|+|| ||+|+..++.+ +++|+. ++++.+|. .|+..|+.++++.|+++...+
T Consensus 194 g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~-------~a~~~~~~~iv~~Ll~~g~~~ 247 (285)
T 3kea_A 194 LFIPDIKLAIDNKDIEMLQALFKYDINIYSANL-------ENVLLDDAEIAKMIIEKHVEY 247 (285)
T ss_dssp BCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG-------GGGTTTCHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh-------hhhhcCCHHHHHHHHHcCCCC
Confidence 9997 99999988888 888884 77777773 557788999999998875443
|
| >1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-33 Score=247.98 Aligned_cols=212 Identities=16% Similarity=0.109 Sum_probs=177.5
Q ss_pred CCCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHH
Q 039483 22 QPQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVL 101 (360)
Q Consensus 22 ~~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~L 101 (360)
...+.+|||.|+..|+.++++.|++..... +.++ +.+|..|.|| ||+|+..|+.+++++|
T Consensus 5 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~------------------~~~~-~~~~~~g~t~-L~~A~~~~~~~~v~~L 64 (236)
T 1ikn_D 5 TEDGDSFLHLAIIHEEKALTMEVIRQVKGD------------------LAFL-NFQNNLQQTP-LHLAVITNQPEIAEAL 64 (236)
T ss_dssp --CCCCTTHHHHHTTCSSSSSCCCC-----------------------CCCC-CCCCTTCCCH-HHHHHHTTCHHHHHCC
T ss_pred CCCCCchhHHHHHcCChhHHHHHHHHhhcc------------------HHHh-hccCCCCCCH-HHHHHHcCCHHHHHHH
Confidence 345678999999999999999998843332 5577 8899999999 9999999999999999
Q ss_pred HHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCC------CccccC
Q 039483 102 IERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSV------SHIYMK 175 (360)
Q Consensus 102 l~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~------~~~~~~ 175 (360)
+++|++++. .|..|. ||||+|+..|+ .+++++|++.|.++ +. .
T Consensus 65 l~~g~~~~~------------------~~~~g~---------t~L~~A~~~~~-~~~v~~Ll~~~~~~~~~~~~~~---~ 113 (236)
T 1ikn_D 65 LGAGCDPEL------------------RDFRGN---------TPLHLACEQGC-LASVGVLTQSCTTPHLHSILKA---T 113 (236)
T ss_dssp CSCCCCSCC------------------CCTTCC---------CHHHHHHHHTC-HHHHHHHHHSTTTTSSSCGGGC---C
T ss_pred HHcCCCCCC------------------cCCCCC---------CHHHHHHHcCC-HHHHHHHHhcccchhHHHHhhc---c
Confidence 999999887 777775 77788888999 99999999998753 44 7
Q ss_pred CCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccC-CCChHHHHHHHcCCHHHHHHHHhcCCccccccc
Q 039483 176 APMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQ-CWWTPIHYAAYHRNYLILKLILKIDRTAAKIAD 254 (360)
Q Consensus 176 d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~-~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d 254 (360)
+..|.||||+|+..|+. +++++|++.+ .+++..+. .|+||||+|+..|+.+++++|+++|+++ +.++
T Consensus 114 ~~~g~t~L~~A~~~~~~----------~~v~~Ll~~g-~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~~ 181 (236)
T 1ikn_D 114 NYNGHTCLHLASIHGYL----------GIVELLVSLG-ADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADV-NRVT 181 (236)
T ss_dssp CTTCCCHHHHHHHTTCH----------HHHHHHHHHT-CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCS-CCCC
T ss_pred CCCCCCHHHHHHHcCCH----------HHHHHHHHcC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-Cccc
Confidence 78899999999999999 9999999998 78888887 9999999999999999999999999999 9999
Q ss_pred cCCCCchhhhhhcCCccc-cccccc--cc--CccCCCCCCcHHHHHHH
Q 039483 255 KDRKMTALHLVHGPKGCQ-NNMLAS--SL--MDEGDAKGNTTVHFFAA 297 (360)
Q Consensus 255 ~~~g~tpLh~A~~~~~~~-~~~L~~--~~--~~~~d~~g~Tpl~~A~~ 297 (360)
. .|+||||+|+..++.+ +++|+. ++ ....+..|.||.+.+..
T Consensus 182 ~-~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 228 (236)
T 1ikn_D 182 Y-QGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTESE 228 (236)
T ss_dssp T-TCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCCC--
T ss_pred C-CCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHHHhhhcc
Confidence 8 9999999999988888 888874 43 34778888888776543
|
| >3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-32 Score=249.80 Aligned_cols=191 Identities=14% Similarity=0.048 Sum_probs=176.5
Q ss_pred cccCCCCCCCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHh
Q 039483 72 KMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAE 151 (360)
Q Consensus 72 ~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~ 151 (360)
.+ +.+|..|.|| ||+|+..|+.+++++|+++|++++. .| |. ||||+|+.
T Consensus 23 ~~-~~~d~~g~t~-L~~A~~~g~~~~v~~Ll~~g~~~~~------------------~~--g~---------t~L~~A~~ 71 (285)
T 3kea_A 23 DT-FKADVHGHSA-SYYAIADNNVRLVCTLLNAGALKNL------------------LE--NE---------FPLHQAAT 71 (285)
T ss_dssp TT-TCCCTTSCCH-HHHHHHTTCHHHHHHHHHTTGGGSC------------------CT--TC---------CHHHHHTT
T ss_pred CC-CccCCCCCCH-HHHHHHcCCHHHHHHHHhCCCCCCC------------------CC--CC---------CHHHHHHH
Confidence 46 8899999999 9999999999999999999999887 43 53 88888899
Q ss_pred cCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCC-ChHHHHH
Q 039483 152 YEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCW-WTPIHYA 230 (360)
Q Consensus 152 ~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g-~t~Lh~A 230 (360)
.|+ .+++++|+++|++++. +|..|.||||+|+..|+. +++++|++.+ .+++..+..| .||||+|
T Consensus 72 ~g~-~~~v~~Ll~~ga~~~~---~d~~g~t~L~~A~~~g~~----------~~v~~Ll~~g-a~~~~~~~~g~~t~L~~A 136 (285)
T 3kea_A 72 LED-TKIVKILLFSGLDDSQ---FDDKGNTALYYAVDSGNM----------QTVKLFVKKN-WRLMFYGKTGWKTSFYHA 136 (285)
T ss_dssp SSS-CHHHHHHHHTTCCTTC---CCTTSCCHHHHHHHTTCH----------HHHHHHHHHC-GGGGGCSSSGGGSHHHHH
T ss_pred cCC-HHHHHHHHHCCCCCCC---cCCCCCcHHHHHHHcCCH----------HHHHHHHhcC-CCCCccCCCCCCCHHHHH
Confidence 999 9999999999999999 999999999999999999 9999999998 8899999999 7999999
Q ss_pred HHcCCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-cccccc--ccCccCCCCCCcH-HHHHHHcCCHHHHHH
Q 039483 231 AYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLAS--SLMDEGDAKGNTT-VHFFAAVHRKEIFDD 306 (360)
Q Consensus 231 ~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~~--~~~~~~d~~g~Tp-l~~A~~~~~~~i~~~ 306 (360)
+..|+.+++++|+++|++. ... . .|.||||+|+..++.+ +++|+. ++++.+|..|+|| ||+|++.++.++++.
T Consensus 137 ~~~~~~~~v~~Ll~~g~~~-~~~-~-~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~ 213 (285)
T 3kea_A 137 VMLNDVSIVSYFLSEIPST-FDL-A-ILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQA 213 (285)
T ss_dssp HHTTCHHHHHHHHTTSCTT-CCC-S-THHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHH
T ss_pred HHcCCHHHHHHHHhCCCcc-ccc-c-CCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHH
Confidence 9999999999999999877 333 3 7899999999999999 899984 9999999999998 999999999999999
Q ss_pred Hhhhh
Q 039483 307 LSGRV 311 (360)
Q Consensus 307 l~~~~ 311 (360)
|++..
T Consensus 214 Ll~~g 218 (285)
T 3kea_A 214 LFKYD 218 (285)
T ss_dssp HTTSC
T ss_pred HHHcC
Confidence 99874
|
| >3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-32 Score=233.46 Aligned_cols=189 Identities=14% Similarity=0.081 Sum_probs=173.5
Q ss_pred CCCCCChHHHHHHhcCCHHHHHHHHHhcc-ccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcH
Q 039483 78 TAKGDTRSRHVAAKFDHCDIVSVLIERAK-LVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSS 156 (360)
Q Consensus 78 ~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~-~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~ 156 (360)
+..+.|| ||.|+..|+.++++.|+..+. +++. .|..|. ||||+|+..|+ .
T Consensus 2 ~~~~~~~-L~~A~~~g~~~~v~~ll~~~~~~~~~------------------~~~~g~---------t~L~~A~~~~~-~ 52 (201)
T 3hra_A 2 KTYEVGA-LLEAANQRDTKKVKEILQDTTYQVDE------------------VDTEGN---------TPLNIAVHNND-I 52 (201)
T ss_dssp -CCCTTH-HHHHHHTTCHHHHHHHHTCTTCCTTC------------------CCTTSC---------CHHHHHHHHTC-H
T ss_pred CcccccH-HHHHHHhccHHHHHHHHHcCCCCCCC------------------CCCCCC---------CHHHHHHHcCC-H
Confidence 3568899 999999999999999998876 7776 777875 88888899999 9
Q ss_pred HHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCH
Q 039483 157 HTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNY 236 (360)
Q Consensus 157 ~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~ 236 (360)
+++++|+++|++++. ++..|.||||+|+..|+. +++++|++.+..+++..+..|.||||+|+..|+.
T Consensus 53 ~~v~~Ll~~g~~~~~---~~~~g~t~l~~A~~~~~~----------~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~ 119 (201)
T 3hra_A 53 EIAKALIDRGADINL---QNSISDSPYLYAGAQGRT----------EILAYMLKHATPDLNKHNRYGGNALIPAAEKGHI 119 (201)
T ss_dssp HHHHHHHHTTCCTTC---CCTTSCCHHHHHHHTTCH----------HHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCH
T ss_pred HHHHHHHHcCCCCCC---CCCCCCCHHHHHHHcCCH----------HHHHHHHhccCcccccccCCCCcHHHHHHHcCCH
Confidence 999999999999999 999999999999999999 9999999777688999999999999999999999
Q ss_pred HHHHHHHhcC-CccccccccCCCCchhhhhhcCCc-----cc-ccccc--cccCccCCCCCCcHHHHHHHcCCHHHHHHH
Q 039483 237 LILKLILKID-RTAAKIADKDRKMTALHLVHGPKG-----CQ-NNMLA--SSLMDEGDAKGNTTVHFFAAVHRKEIFDDL 307 (360)
Q Consensus 237 ~~v~~Ll~~g-~~~~~~~d~~~g~tpLh~A~~~~~-----~~-~~~L~--~~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l 307 (360)
+++++|+++| +++ +.++. .|+||||+|+..+. .+ +++|+ +++++.+|..|+||||+|++.|+.++++.|
T Consensus 120 ~~v~~Ll~~g~~~~-~~~~~-~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L 197 (201)
T 3hra_A 120 DNVKLLLEDGREDI-DFQND-FGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKIL 197 (201)
T ss_dssp HHHHHHHHHCCCCT-TCCCT-TSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHcCCCCc-CCCCC-CCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHH
Confidence 9999999999 888 99999 99999999998887 45 88887 499999999999999999999999999998
Q ss_pred hhh
Q 039483 308 SGR 310 (360)
Q Consensus 308 ~~~ 310 (360)
.++
T Consensus 198 l~~ 200 (201)
T 3hra_A 198 AQY 200 (201)
T ss_dssp HTC
T ss_pred Hhc
Confidence 764
|
| >4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A | Back alignment and structure |
|---|
Probab=99.98 E-value=2e-31 Score=223.57 Aligned_cols=157 Identities=25% Similarity=0.290 Sum_probs=145.2
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHhcc
Q 039483 27 PNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIERAK 106 (360)
Q Consensus 27 ~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~ 106 (360)
.+|+.||+.|+.++|+.|++. +.++ +.+|..|.|| ||+|+..|+.+++++|+++|+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~----------------------Gadv-n~~d~~g~t~-l~~a~~~~~~~~~~~ll~~ga 61 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIEN----------------------GADV-NASDSDGRTP-LHHAAENGHKEVVKLLISKGA 61 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHT----------------------TCCT-TCCCTTSCCH-HHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCHHHHHHHHHC----------------------CCCC-CCcCCCCCCH-HHHHHHcCCHHHHHHHHhccc
Confidence 469999999999999999984 7788 9999999999 999999999999999999999
Q ss_pred ccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHH
Q 039483 107 LVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAA 186 (360)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A 186 (360)
+++. +|..|. ||||+|+..|+ .+++++|+++|++++. +|..|+||||+|
T Consensus 62 d~~~------------------~d~~g~---------TpLh~A~~~g~-~~~v~~Ll~~gadvn~---~d~~G~TpLh~A 110 (169)
T 4gpm_A 62 DVNA------------------KDSDGR---------TPLHHAAENGH-KEVVKLLISKGADVNA---KDSDGRTPLHHA 110 (169)
T ss_dssp CTTC------------------CCTTSC---------CHHHHHHHTTC-HHHHHHHHHTTCCTTC---CCTTSCCHHHHH
T ss_pred chhh------------------hccCCC---------CHHHHHHHcCC-HHHHHHHHHCcCCCCC---CCCCCCCHHHHH
Confidence 9988 788885 78888899999 9999999999999999 999999999999
Q ss_pred HhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCcc
Q 039483 187 TMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTA 249 (360)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~ 249 (360)
+..|+. +++++|++.+ ++++.+|..|+||||+|+.+|+.+++++|+++|+++
T Consensus 111 ~~~g~~----------~~v~~Ll~~g-ad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~i 162 (169)
T 4gpm_A 111 AENGHK----------EVVKLLISKG-ADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWL 162 (169)
T ss_dssp HHTTCH----------HHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC----
T ss_pred HHcCCH----------HHHHHHHHcC-CCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCc
Confidence 999999 9999999999 889999999999999999999999999999999998
|
| >2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A | Back alignment and structure |
|---|
Probab=99.98 E-value=2.6e-31 Score=231.95 Aligned_cols=189 Identities=17% Similarity=0.145 Sum_probs=175.4
Q ss_pred CCCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHH
Q 039483 22 QPQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVL 101 (360)
Q Consensus 22 ~~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~L 101 (360)
...+.+|||.||..|+.++++.|++. +.++ +.+|..|.|| ||+|+..|+.+++++|
T Consensus 22 d~~g~t~L~~A~~~g~~~~v~~Ll~~----------------------g~~~-~~~~~~g~t~-L~~A~~~~~~~~v~~L 77 (223)
T 2f8y_A 22 DRTGETALHLAARYSRSDAAKRLLEA----------------------SADA-NIQDNMGRTP-LHAAVSADAQGVFQIL 77 (223)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHT----------------------TCCT-TCCCTTSCCH-HHHHHHTTCHHHHHHH
T ss_pred CCCCCchHHHHHHcCCHHHHHHHHHc----------------------CCCC-CCcCCCCCCH-HHHHHHcCCHHHHHHH
Confidence 45678999999999999999999984 5666 8889999999 9999999999999999
Q ss_pred HHhcc-ccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCC
Q 039483 102 IERAK-LVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMER 180 (360)
Q Consensus 102 l~~g~-~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~ 180 (360)
+++++ +++. .+..|. ||||+|+..|+ .+++++|+++|++++. ++..|.
T Consensus 78 l~~~~~~~~~------------------~~~~g~---------t~L~~A~~~~~-~~~~~~Ll~~g~~~~~---~~~~g~ 126 (223)
T 2f8y_A 78 IRNRATDLDA------------------RMHDGT---------TPLILAARLAV-EGMLEDLINSHADVNA---VDDLGK 126 (223)
T ss_dssp HHBTTSCTTC------------------CCTTCC---------CHHHHHHHHTC-HHHHHHHHHTTCCTTC---BCTTSC
T ss_pred HHcCCCCccc------------------CCCCCC---------cHHHHHHHhCc-HHHHHHHHHcCCCCcC---cCCCCC
Confidence 99987 6665 677775 78888899999 9999999999999999 999999
Q ss_pred cHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCc
Q 039483 181 QALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMT 260 (360)
Q Consensus 181 t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~t 260 (360)
||||+|+..|+. +++++|++.+ .+++..|..|+||||+|+..|+.+++++|+++|+++ +.++. .|.|
T Consensus 127 t~L~~A~~~~~~----------~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~-~g~t 193 (223)
T 2f8y_A 127 SALHWAAAVNNV----------DAAVVLLKNG-ANKDMQNNREETPLFLAAREGSYETAKVLLDHFANR-DITDH-MDRL 193 (223)
T ss_dssp BHHHHHHHTTCH----------HHHHHHHHTT-CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT-TCCC
T ss_pred cHHHHHHHcCCH----------HHHHHHHHcC-CCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCC-ccccc-cCCC
Confidence 999999999999 9999999998 889999999999999999999999999999999999 99999 9999
Q ss_pred hhhhhhcCCccc-cccccc
Q 039483 261 ALHLVHGPKGCQ-NNMLAS 278 (360)
Q Consensus 261 pLh~A~~~~~~~-~~~L~~ 278 (360)
|+|+|+..++.+ +++|++
T Consensus 194 ~l~~A~~~~~~~i~~~L~~ 212 (223)
T 2f8y_A 194 PRDIAQERMHHDIVRLLDE 212 (223)
T ss_dssp HHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHhcchHHHHHHHH
Confidence 999999999988 888875
|
| >3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.6e-31 Score=229.48 Aligned_cols=190 Identities=18% Similarity=0.209 Sum_probs=172.8
Q ss_pred CCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHH
Q 039483 23 PQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLI 102 (360)
Q Consensus 23 ~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll 102 (360)
.+..++||.||..|+.+.++.|+... +.++ +.+|..|.|| ||+|+..|+.+++++|+
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~---------------------~~~~-~~~~~~g~t~-L~~A~~~~~~~~v~~Ll 59 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDT---------------------TYQV-DEVDTEGNTP-LNIAVHNNDIEIAKALI 59 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCT---------------------TCCT-TCCCTTSCCH-HHHHHHHTCHHHHHHHH
T ss_pred cccccHHHHHHHhccHHHHHHHHHcC---------------------CCCC-CCCCCCCCCH-HHHHHHcCCHHHHHHHH
Confidence 34568899999999999999998731 4467 8899999999 99999999999999999
Q ss_pred HhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHH-hhCCCCCccccCCCCCCc
Q 039483 103 ERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAIL-KSCTSVSHIYMKAPMERQ 181 (360)
Q Consensus 103 ~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll-~~g~~~~~~~~~d~~g~t 181 (360)
++|++++. .|..|. ||||+|+..|+ .+++++|+ ..+.+++. ++..|.|
T Consensus 60 ~~g~~~~~------------------~~~~g~---------t~l~~A~~~~~-~~~~~~Ll~~~~~~~~~---~~~~g~t 108 (201)
T 3hra_A 60 DRGADINL------------------QNSISD---------SPYLYAGAQGR-TEILAYMLKHATPDLNK---HNRYGGN 108 (201)
T ss_dssp HTTCCTTC------------------CCTTSC---------CHHHHHHHTTC-HHHHHHHHHHSCCCTTC---CCTTSCC
T ss_pred HcCCCCCC------------------CCCCCC---------CHHHHHHHcCC-HHHHHHHHhccCccccc---ccCCCCc
Confidence 99999988 777775 78888899999 99999999 55668888 9999999
Q ss_pred HHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCC-----HHHHHHHHhcCCccccccccC
Q 039483 182 ALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRN-----YLILKLILKIDRTAAKIADKD 256 (360)
Q Consensus 182 ~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~-----~~~v~~Ll~~g~~~~~~~d~~ 256 (360)
|||+|+..|+. +++++|++.++.+++..|..|+||||+|+..++ .+++++|+++|+++ +.+|.
T Consensus 109 ~L~~A~~~~~~----------~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~-~~~~~- 176 (201)
T 3hra_A 109 ALIPAAEKGHI----------DNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQ-SIKDN- 176 (201)
T ss_dssp SHHHHHHTTCH----------HHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCT-TCCCT-
T ss_pred HHHHHHHcCCH----------HHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCC-CccCC-
Confidence 99999999999 999999999978899999999999999999998 99999999999999 99999
Q ss_pred CCCchhhhhhcCCccc-cccccc
Q 039483 257 RKMTALHLVHGPKGCQ-NNMLAS 278 (360)
Q Consensus 257 ~g~tpLh~A~~~~~~~-~~~L~~ 278 (360)
.|+||||+|+..++.+ +++|++
T Consensus 177 ~g~t~l~~A~~~~~~~~~~~Ll~ 199 (201)
T 3hra_A 177 SGRTAMDYANQKGYTEISKILAQ 199 (201)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHhHHHHHHh
Confidence 9999999999999888 777653
|
| >2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.6e-31 Score=234.81 Aligned_cols=193 Identities=21% Similarity=0.194 Sum_probs=170.3
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHh
Q 039483 25 IDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIER 104 (360)
Q Consensus 25 ~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~ 104 (360)
+.+|||.||+.|+.+.++.|++. . +.++ +.+|..|.|| ||+|+..|+.+++++|+++
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~----~-----------------g~~~-~~~~~~g~t~-L~~A~~~g~~~~v~~Ll~~ 59 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLKF----E-----------------GCEV-HQRGAMGETA-LHIAALYDNLEAAMVLMEA 59 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHTT----T-----------------CSCT-TCCCTTSCCH-HHHHHHTTCHHHHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHh----c-----------------CCCc-ccCCCCCCCH-HHHHHHcCCHHHHHHHHHc
Confidence 56899999999999999999883 1 6677 8899999999 9999999999999999999
Q ss_pred ccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCC-------
Q 039483 105 AKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAP------- 177 (360)
Q Consensus 105 g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~------- 177 (360)
|+++...+ .+..|..|. ||||+|+..|+ .+++++|+++|++++. ++.
T Consensus 60 ~~~~~~~~-------------~~~~~~~g~---------t~L~~A~~~~~-~~~v~~Ll~~g~~~~~---~~~~~~~~~~ 113 (232)
T 2rfa_A 60 APELVFEP-------------MTSELYEGQ---------TALHIAVINQN-VNLVRALLARGASVSA---RATGSVFHYR 113 (232)
T ss_dssp CGGGGGCC-------------CCSTTTTTC---------CHHHHHHHTTC-HHHHHHHHHTTCCTTC---CCCSGGGSCC
T ss_pred Cchhcccc-------------ccccCCCCc---------CHHHHHHHcCC-HHHHHHHHhCCCCCCc---ccCCcceeec
Confidence 98863210 112566774 88888899999 9999999999999988 655
Q ss_pred ------CCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHH----HHHHhcCC
Q 039483 178 ------MERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLIL----KLILKIDR 247 (360)
Q Consensus 178 ------~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v----~~Ll~~g~ 247 (360)
.|.||||+|+..|+. +++++|++++ .+++.+|..|+||||+|+..++.+++ ++|++.|+
T Consensus 114 ~~~~~~~g~t~L~~A~~~~~~----------~~v~~Ll~~g-a~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~ 182 (232)
T 2rfa_A 114 PHNLIYYGEHPLSFAACVGSE----------EIVRLLIEHG-ADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDG 182 (232)
T ss_dssp TTCSCCCCSSHHHHHHHHTCH----------HHHHHHHHTT-CCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTC
T ss_pred ccccccCCCCHHHHHHHcCCH----------HHHHHHHHCC-CCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCC
Confidence 799999999999999 9999999998 88999999999999999999999988 99999999
Q ss_pred ccc-----cccccCCCCchhhhhhcCCccc-cccccc
Q 039483 248 TAA-----KIADKDRKMTALHLVHGPKGCQ-NNMLAS 278 (360)
Q Consensus 248 ~~~-----~~~d~~~g~tpLh~A~~~~~~~-~~~L~~ 278 (360)
+.. +.+|. .|+||||+|+..++.+ +++|++
T Consensus 183 ~~~~~~~~~~~~~-~g~tpl~~A~~~g~~~~v~~Ll~ 218 (232)
T 2rfa_A 183 GDHLKSLELVPNN-QGLTPFKLAGVEGNIVMFQHLMQ 218 (232)
T ss_dssp SCSSCCGGGCCCT-TSCCHHHHHHHHTCHHHHHHHHH
T ss_pred chhhhhhhccCCC-CCCCHHHHHHHcCCHHHHHHHHh
Confidence 772 47888 9999999999999999 888885
|
| >4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=5.4e-32 Score=244.12 Aligned_cols=181 Identities=18% Similarity=0.230 Sum_probs=147.5
Q ss_pred CCCCCHHHHHHHHcCChH-HHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHH
Q 039483 22 QPQIDPNLFKVAAAGNLE-PFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSV 100 (360)
Q Consensus 22 ~~~~~~~L~~Aa~~G~~~-~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~ 100 (360)
...+.+||+.|+..|+.+ +++.|++. +.++ +.+|.+|.|| ||+||..|+.++|++
T Consensus 49 ~~~~~t~L~~a~~~~~~~~~v~~Ll~~----------------------Gadv-n~~d~~G~Tp-Lh~A~~~g~~~~v~~ 104 (269)
T 4b93_B 49 DPEFCHPLCQCPKCAPAQKRLAKVPAS----------------------GLGV-NVTSQDGSSP-LHVAALHGRADLIPL 104 (269)
T ss_dssp --------------------------C----------------------CCCT-TCCCTTSCCH-HHHHHHTTCTTHHHH
T ss_pred CccCCCHHHHHHHhCCHHHHHHHHHHC----------------------CCCC-CCcCCCCCCH-HHHHHHcCcHHHHHH
Confidence 345678999999988765 55666552 7788 9999999999 999999999999999
Q ss_pred HHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCC
Q 039483 101 LIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMER 180 (360)
Q Consensus 101 Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~ 180 (360)
|++.|++++. .+..|. ||++.|+..++ .+++++|++.|++++. +|..|.
T Consensus 105 Ll~~~a~~~~------------------~~~~g~---------t~l~~a~~~~~-~~~~~~Ll~~g~~~n~---~d~~g~ 153 (269)
T 4b93_B 105 LLKHGANAGA------------------RNADQA---------VPLHLACQQGH-FQVVKCLLDSNAKPNK---KDLSGN 153 (269)
T ss_dssp HHHTTCCTTC------------------CCTTCC---------CHHHHHHHHTC-HHHHHHHHHTTCCSCC---CCTTCC
T ss_pred HHhcCCCcCc------------------cCCCCC---------CccccccccCh-HHHHHHHHHCCCCCCC---CCCCCC
Confidence 9999999988 777875 78888889999 9999999999999999 999999
Q ss_pred cHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCc
Q 039483 181 QALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMT 260 (360)
Q Consensus 181 t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~t 260 (360)
||||+|+..|+. +++++|++.+ ++++..+..|+||||+|+..|+.+++++|+++|+++ +.+|. .|+|
T Consensus 154 TpL~~A~~~g~~----------~~v~~Ll~~g-advn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~-~~~d~-~G~T 220 (269)
T 4b93_B 154 TPLIYACSGGHH----------ELVALLLQHG-ASINASNNKGNTALHEAVIEKHVFVVELLLLHGASV-QVLNK-RQRT 220 (269)
T ss_dssp CHHHHHHHTTCG----------GGHHHHHHTT-CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCS-CCCCT-TSCC
T ss_pred CHHHHHHHCCCH----------HHHHHHHHCC-CCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCC-CCcCC-CCCC
Confidence 999999999999 9999999999 889999999999999999999999999999999999 99999 9999
Q ss_pred hhhhhhcCCc
Q 039483 261 ALHLVHGPKG 270 (360)
Q Consensus 261 pLh~A~~~~~ 270 (360)
|||+|+.++.
T Consensus 221 pL~~A~~~~~ 230 (269)
T 4b93_B 221 AVDCAEQNSK 230 (269)
T ss_dssp SGGGSCTTCH
T ss_pred HHHHHHhCCc
Confidence 9999987765
|
| >2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A | Back alignment and structure |
|---|
Probab=99.98 E-value=8.5e-32 Score=240.44 Aligned_cols=214 Identities=16% Similarity=0.085 Sum_probs=171.8
Q ss_pred CCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCC----CCCCCCChHHHHHHhc---CCHH
Q 039483 24 QIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQP----VTAKGDTRSRHVAAKF---DHCD 96 (360)
Q Consensus 24 ~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~----~~~~g~tp~Lh~A~~~---g~~~ 96 (360)
++.+|||.||+.|+.+.++.+++.-+.. +.++ +. +|..|.|| ||+|+.. |+.+
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~------------------g~~i-~~~~~~~d~~g~t~-L~~A~~~~~~g~~~ 60 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWN------------------SKYL-TDSAYTEGSTGKTC-LMKAVLNLQDGVNA 60 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHH------------------TCCT-TSGGGSBTTTTBCH-HHHHHHTCBTTBCT
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHc------------------CCCc-ccccccCCCCCCCH-HHHHHHccccchHH
Confidence 4678999999999999777666632222 5666 66 89999999 9999999 9999
Q ss_pred HHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCC
Q 039483 97 IVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKA 176 (360)
Q Consensus 97 ~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d 176 (360)
++++|++.|++++..+.-.. ......|..|. ||||+|+..|+ .+++++|+++|++++. ++
T Consensus 61 ~v~~Ll~~g~~~~~~~~~~~-------~~~~~~d~~g~---------t~L~~A~~~g~-~~~v~~Ll~~ga~~~~---~~ 120 (256)
T 2etb_A 61 CIMPLLQIDKDSGNPKPLVN-------AQCTDEFYQGH---------SALHIAIEKRS-LQCVKLLVENGADVHL---RA 120 (256)
T ss_dssp THHHHHHHHHHTTCSSCGGG-------CCCCSTTTTTC---------CHHHHHHHTTC-HHHHHHHHHTTCCTTC---CC
T ss_pred HHHHHHhcCCcccchhhhcc-------cccccccccCC---------CHHHHHHHcCC-HHHHHHHHHcCCCCCc---cc
Confidence 99999999998764210000 00112345664 88888899999 9999999999999998 77
Q ss_pred CC-------------CCcHHHHHHhcCCcccccccCChHHHHHHHHh---cCccccccccCCCChHHHHHHH--cCCHH-
Q 039483 177 PM-------------ERQALHAATMHIDLCKFNHTLSNDCAVQQLFE---GKKSMIKGIDQCWWTPIHYAAY--HRNYL- 237 (360)
Q Consensus 177 ~~-------------g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~---~~~~~i~~~d~~g~t~Lh~A~~--~~~~~- 237 (360)
.. |.||||+|+..|+. +++++|++ .+ .+++.+|..|+||||+|+. .++.+
T Consensus 121 ~~~~~~~~~~~~~~~g~tpL~~A~~~~~~----------~~v~~Ll~~~~~g-a~~n~~d~~g~TpLh~A~~~~~~~~~~ 189 (256)
T 2etb_A 121 CGRFFQKHQGTCFYFGELPLSLAACTKQW----------DVVTYLLENPHQP-ASLEATDSLGNTVLHALVMIADNSPEN 189 (256)
T ss_dssp CSGGGSCCSSSCCCSCSSHHHHHHHTTCH----------HHHHHHHHCSSCC-CCTTCCCTTSCCHHHHHHHHCCSCHHH
T ss_pred ccccccccccccccCCCCHHHHHHHcCCH----------HHHHHHHhccccC-CCcCccCCCCCCHHHHHHHcccCCchh
Confidence 76 99999999999999 99999999 66 8888999999999999998 77887
Q ss_pred ------HHHHHHhcCCccccccccCCCCchhhhhhcCCcccccccccccCccCCCCCCcHHHHHHHcCCHHHHHHHhhhh
Q 039483 238 ------ILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQNNMLASSLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGRV 311 (360)
Q Consensus 238 ------~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~~~~L~~~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~~ 311 (360)
++++|+++|+++ +.... ..+.+|..|+||||+|++.|+.++++.|+++.
T Consensus 190 ~~~~~~iv~~Ll~~ga~~-~~~~~------------------------~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g 244 (256)
T 2etb_A 190 SALVIHMYDGLLQMGARL-CPTVQ------------------------LEEISNHQGLTPLKLAAKEGKIEIFRHILQRE 244 (256)
T ss_dssp HHHHHHHHHHHHHHHHHH-STTCC------------------------GGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCc-ccccc------------------------cccccCCCCCCHHHHHHHhCCHHHHHHHHhCC
Confidence 999999988877 21111 13577889999999999999999999999875
Q ss_pred cc
Q 039483 312 KA 313 (360)
Q Consensus 312 ~~ 313 (360)
..
T Consensus 245 ~~ 246 (256)
T 2etb_A 245 FS 246 (256)
T ss_dssp HH
T ss_pred CC
Confidence 43
|
| >3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A | Back alignment and structure |
|---|
Probab=99.98 E-value=1.3e-31 Score=235.11 Aligned_cols=188 Identities=21% Similarity=0.200 Sum_probs=173.1
Q ss_pred CCCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHH
Q 039483 22 QPQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVL 101 (360)
Q Consensus 22 ~~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~L 101 (360)
...+.+|||.|+..|+.++++.|++. +..+ +.+|..|.|| ||+|+..|+.+++++|
T Consensus 37 ~~~g~t~L~~A~~~g~~~~v~~Ll~~----------------------g~~~-~~~~~~g~t~-L~~A~~~~~~~~v~~L 92 (231)
T 3aji_A 37 DQDSRTALHWACSAGHTEIVEFLLQL----------------------GVPV-NDKDDAGWSP-LHIAASAGXDEIVKAL 92 (231)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHT----------------------TCCS-CCCCTTSCCH-HHHHHHHTCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHHh----------------------CCCC-CCcCCCCCCH-HHHHHHcCHHHHHHHH
Confidence 45678999999999999999999984 5667 8889999999 9999999999999999
Q ss_pred HHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCc
Q 039483 102 IERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQ 181 (360)
Q Consensus 102 l~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t 181 (360)
+++|++++. .|..|. ||||+|+..|+ .+++++|+++|++++. ++..|.|
T Consensus 93 l~~g~~~~~------------------~~~~g~---------t~L~~A~~~~~-~~~~~~Ll~~g~~~~~---~~~~g~t 141 (231)
T 3aji_A 93 LVKGAHVNA------------------VNQNGC---------TPLHYAASKNR-HEIAVMLLEGGANPDA---KDHYDAT 141 (231)
T ss_dssp HHTTCCTTC------------------CCTTSC---------CHHHHHHHTTC-HHHHHHHHHTTCCTTC---CCTTSCC
T ss_pred HHcCCCCCC------------------CCCCCC---------CHHHHHHHcCC-HHHHHHHHHcCCCCCC---cCCCCCc
Confidence 999999887 777775 78888889999 9999999999999999 9999999
Q ss_pred HHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCch
Q 039483 182 ALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTA 261 (360)
Q Consensus 182 ~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tp 261 (360)
|||+|+..|+. +++++|++.+ .+++.+|..|+||||+|+..|+.+++++|+++|+++ +.+|. .|+||
T Consensus 142 ~L~~A~~~~~~----------~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~-~g~t~ 208 (231)
T 3aji_A 142 AMHRAAAKGNL----------KMVHILLFYK-ASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASI-YIENK-EEKTP 208 (231)
T ss_dssp HHHHHHHHTCH----------HHHHHHHHTT-CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS-CCCCT-TSCCH
T ss_pred HHHHHHHcCCH----------HHHHHHHhcC-CCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCC-CCCCC-CCCCH
Confidence 99999999999 9999999998 889999999999999999999999999999999999 99999 99999
Q ss_pred hhhhhcCCccc-ccccc
Q 039483 262 LHLVHGPKGCQ-NNMLA 277 (360)
Q Consensus 262 Lh~A~~~~~~~-~~~L~ 277 (360)
+|+|+..++.+ .++|.
T Consensus 209 l~~A~~~~~~~i~~lL~ 225 (231)
T 3aji_A 209 LQVAKGGLGLILKRLAE 225 (231)
T ss_dssp HHHSCHHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHHHc
Confidence 99998776666 55554
|
| >2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A | Back alignment and structure |
|---|
Probab=99.97 E-value=9.2e-31 Score=229.12 Aligned_cols=191 Identities=16% Similarity=0.130 Sum_probs=170.9
Q ss_pred CCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHH
Q 039483 81 GDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVV 160 (360)
Q Consensus 81 g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~ 160 (360)
|.|| ||+||..|+.+++++|++.|.+... ..|..|. ||||+|+..|+ .++++
T Consensus 2 g~t~-L~~A~~~g~~~~v~~Ll~~~~~~~~-----------------~~~~~g~---------t~L~~A~~~~~-~~~v~ 53 (228)
T 2dzn_A 2 SNYP-LHQACMENEFFKVQELLHSKPSLLL-----------------QKDQDGR---------IPLHWSVSFQA-HEITS 53 (228)
T ss_dssp -CCH-HHHHHHTTCHHHHHHHHHHCGGGTT-----------------CCCTTSC---------CHHHHHHHTTC-HHHHH
T ss_pred CccH-HHHHHHhCCHHHHHHHHhcCccccc-----------------cCCCCCC---------CHHHHHHHcCC-HHHHH
Confidence 7899 9999999999999999999987654 3677775 88888899999 99999
Q ss_pred HHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcC-ccccccccCCCChHHHHHHHcCCHHHH
Q 039483 161 AILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGK-KSMIKGIDQCWWTPIHYAAYHRNYLIL 239 (360)
Q Consensus 161 ~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~-~~~i~~~d~~g~t~Lh~A~~~~~~~~v 239 (360)
+|++.|++++.....+..|.||||+|+..|+. +++++|++.+ ..+++..+..|+||||+|+..|+.+++
T Consensus 54 ~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~----------~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~ 123 (228)
T 2dzn_A 54 FLLSKMENVNLDDYPDDSGWTPFHIACSVGNL----------EVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVS 123 (228)
T ss_dssp HHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCH----------HHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHH
T ss_pred HHHhccccccccccCCCCCCCHHHHHHHcCCH----------HHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHH
Confidence 99999965554223677999999999999999 9999999986 466888899999999999999999999
Q ss_pred HHHHhcCCccccccccCCCCchhhhhhcCCccc-cccccc---ccCccCCCCCCcHHHHHHHcCCHHHHHHHh-hhh
Q 039483 240 KLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLAS---SLMDEGDAKGNTTVHFFAAVHRKEIFDDLS-GRV 311 (360)
Q Consensus 240 ~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~~---~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~-~~~ 311 (360)
++|+++|+++ +.++. .|+||||+|+..++.+ +++|+. ++++.+|..|+||||+|++.|+.++++.|+ +..
T Consensus 124 ~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~g 198 (228)
T 2dzn_A 124 QFLIENGASV-RIKDK-FNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYG 198 (228)
T ss_dssp HHHHHTTCCS-CCCCT-TSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC
T ss_pred HHHHHcCCCc-cccCC-CCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcC
Confidence 9999999999 99999 9999999999999998 888883 789999999999999999999999999999 543
|
| >1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-32 Score=243.41 Aligned_cols=195 Identities=19% Similarity=0.191 Sum_probs=171.1
Q ss_pred CCCCCCCCChHHHHHHhcCCHHHHHHHHHhcc----ccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHH
Q 039483 75 QPVTAKGDTRSRHVAAKFDHCDIVSVLIERAK----LVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAA 150 (360)
Q Consensus 75 ~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~----~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~ 150 (360)
+.+|.+|.|| ||+|+..|+.+++++|++.+. +++. .|..|. ||||+|+
T Consensus 2 ~~~d~~g~t~-L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~------------------~~~~g~---------t~L~~A~ 53 (236)
T 1ikn_D 2 QQLTEDGDSF-LHLAIIHEEKALTMEVIRQVKGDLAFLNF------------------QNNLQQ---------TPLHLAV 53 (236)
T ss_dssp -----CCCCT-THHHHHTTCSSSSSCCCC-----CCCCCC------------------CCTTCC---------CHHHHHH
T ss_pred CcCCCCCCch-hHHHHHcCChhHHHHHHHHhhccHHHhhc------------------cCCCCC---------CHHHHHH
Confidence 5678999999 999999999999999998875 4555 777875 8888889
Q ss_pred hcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCc-----cccccccCCCCh
Q 039483 151 EYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKK-----SMIKGIDQCWWT 225 (360)
Q Consensus 151 ~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~-----~~i~~~d~~g~t 225 (360)
..|+ .+++++|+++|++++. ++..|.||||+|+..|+. +++++|++.+. ..++..+..|+|
T Consensus 54 ~~~~-~~~v~~Ll~~g~~~~~---~~~~g~t~L~~A~~~~~~----------~~v~~Ll~~~~~~~~~~~~~~~~~~g~t 119 (236)
T 1ikn_D 54 ITNQ-PEIAEALLGAGCDPEL---RDFRGNTPLHLACEQGCL----------ASVGVLTQSCTTPHLHSILKATNYNGHT 119 (236)
T ss_dssp HTTC-HHHHHCCCSCCCCSCC---CCTTCCCHHHHHHHHTCH----------HHHHHHHHSTTTTSSSCGGGCCCTTCCC
T ss_pred HcCC-HHHHHHHHHcCCCCCC---cCCCCCCHHHHHHHcCCH----------HHHHHHHhcccchhHHHHhhccCCCCCC
Confidence 9999 9999999999999999 999999999999999999 99999999872 225778889999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-cccccc--ccCccCCCCCCcHHHHHHHcCCHH
Q 039483 226 PIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLAS--SLMDEGDAKGNTTVHFFAAVHRKE 302 (360)
Q Consensus 226 ~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~~--~~~~~~d~~g~Tpl~~A~~~~~~~ 302 (360)
|||+|+..|+.+++++|+++|+++ +.++...|+||||+|+..++.+ +++|+. ++++.+|..|+||||+|+..++.+
T Consensus 120 ~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~ 198 (236)
T 1ikn_D 120 CLHLASIHGYLGIVELLVSLGADV-NAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTR 198 (236)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchH
Confidence 999999999999999999999999 8887438999999999999999 888884 999999999999999999999999
Q ss_pred HHHHHhhhhc
Q 039483 303 IFDDLSGRVK 312 (360)
Q Consensus 303 i~~~l~~~~~ 312 (360)
+++.|+++..
T Consensus 199 ~~~~Ll~~ga 208 (236)
T 1ikn_D 199 IQQQLGQLTL 208 (236)
T ss_dssp HHHHHHTTSC
T ss_pred HHHHHHHcch
Confidence 9999998753
|
| >2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.2e-32 Score=243.74 Aligned_cols=212 Identities=17% Similarity=0.158 Sum_probs=165.5
Q ss_pred CCCCCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccC----CCCCCCCChHHHHHHhc---
Q 039483 20 TSQPQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQ----PVTAKGDTRSRHVAAKF--- 92 (360)
Q Consensus 20 ~~~~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~----~~~~~g~tp~Lh~A~~~--- 92 (360)
.....+.++||.||+.|+.++++.|++...+. +..+ + ..|..|.|| ||+||..
T Consensus 8 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~------------------~~~~-~~~~~~~~~~g~tp-L~~A~~~~~~ 67 (273)
T 2pnn_A 8 PPRLYDRRSIFDAVAQSNCQELESLLPFLQRS------------------KKRL-TDSEFKDPETGKTC-LLKAMLNLHN 67 (273)
T ss_dssp ---CCCHHHHHHHHHTTCSSTTTTHHHHHHHS------------------CCCT-TSGGGSCTTTCCCH-HHHHHHSCBT
T ss_pred CCCcccchHHHHHHHcCCHHHHHHHHHHHhhc------------------cccc-CCcccccCcCCCCH-HHHHHHHHhc
Confidence 34566789999999999999999999854433 3333 2 468899999 9999987
Q ss_pred CCHHHHHHHHHhccccCcccccccccchhhHHHhhc----ccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCC
Q 039483 93 DHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRM----TNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTS 168 (360)
Q Consensus 93 g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~----~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~ 168 (360)
|+.+++++|++.|++.+. .+.+++. .|..|. ||||+|+..|+ .+++++|+++|++
T Consensus 68 g~~~~v~~Ll~~ga~~~~-----------~~~~i~~~~~~~d~~g~---------tpL~~A~~~g~-~~~v~~Ll~~ga~ 126 (273)
T 2pnn_A 68 GQNDTIALLLDVARKTDS-----------LKQFVNASYTDSYYKGQ---------TALHIAIERRN-MTLVTLLVENGAD 126 (273)
T ss_dssp TBCHHHHHHHHHHHHTTC-----------HHHHHTCCCCSTTTTTC---------CHHHHHHHTTC-HHHHHHHHHTTCC
T ss_pred CChHHHHHHHHhhccccc-----------hhHHhhcccccccCCCC---------CHHHHHHHcCC-HHHHHHHHHCCCC
Confidence 999999999999987543 1223332 456774 88888899999 9999999999999
Q ss_pred CCccccCCC--------------CCCcHHHHHHhcCCcccccccCChHHHHHHHHh---cCccccccccCCCChHHHHHH
Q 039483 169 VSHIYMKAP--------------MERQALHAATMHIDLCKFNHTLSNDCAVQQLFE---GKKSMIKGIDQCWWTPIHYAA 231 (360)
Q Consensus 169 ~~~~~~~d~--------------~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~---~~~~~i~~~d~~g~t~Lh~A~ 231 (360)
++. ++. .|.||||+|+..|+. +++++|++ .+ .+++.+|..|+||||+|+
T Consensus 127 ~~~---~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~----------~~v~~Ll~~~~~g-ad~~~~d~~g~tpLh~A~ 192 (273)
T 2pnn_A 127 VQA---AANGDFFKKTKGRPGFYFGELPLSLAACTNQL----------AIVKFLLQNSWQP-ADISARDSVGNTVLHALV 192 (273)
T ss_dssp TTC---CBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCH----------HHHHHHHHCSSCC-CCTTCCCTTSCCHHHHHH
T ss_pred cCc---cccccccccccccccccCCCCHHHHHHHcCCH----------HHHHHHHhcccCC-CCceeeCCCCCcHHHHHH
Confidence 998 776 688888888888888 88888888 66 778888888888888888
Q ss_pred HcCC---------HHHHHHHHhcCCccccccccCCCCchhhhhhcCCcccccccccccCccCCCCCCcHHHHHHHcCCHH
Q 039483 232 YHRN---------YLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQNNMLASSLMDEGDAKGNTTVHFFAAVHRKE 302 (360)
Q Consensus 232 ~~~~---------~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~~~~L~~~~~~~~d~~g~Tpl~~A~~~~~~~ 302 (360)
..|+ .+++++|+++|+++ +.... .++.+|..|+||||+|++.|+.+
T Consensus 193 ~~~~~~~~~~~~~~~~v~~Ll~~ga~~-n~~~~------------------------~~~~~d~~g~TpL~~A~~~g~~~ 247 (273)
T 2pnn_A 193 EVADNTVDNTKFVTSMYNEILILGAKL-HPTLK------------------------LEEITNRKGLTPLALAASSGKIG 247 (273)
T ss_dssp HHCCSCHHHHHHHHHHHHHHHHHHHHH-CTTCC------------------------GGGCCCTTSCCHHHHHHHTTCHH
T ss_pred HccCcchhHHHHHHHHHHHHHHhhhhc-ccccc------------------------cccccCCCCCCHHHHHHHhChHH
Confidence 8777 67888888888777 33211 12456788888888888888888
Q ss_pred HHHHHhhhh
Q 039483 303 IFDDLSGRV 311 (360)
Q Consensus 303 i~~~l~~~~ 311 (360)
+++.|+++.
T Consensus 248 iv~~Ll~~g 256 (273)
T 2pnn_A 248 VLAYILQRE 256 (273)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHCC
Confidence 888888864
|
| >3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-31 Score=252.05 Aligned_cols=236 Identities=12% Similarity=0.026 Sum_probs=191.0
Q ss_pred CCCCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHH
Q 039483 21 SQPQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSV 100 (360)
Q Consensus 21 ~~~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~ 100 (360)
....+.+|||.||..|+.++++.|++. +..+ .+..|.|| ||+|+..|+.+++++
T Consensus 49 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~----------------------g~~~---~~~~g~t~-L~~A~~~g~~~~v~~ 102 (364)
T 3ljn_A 49 QNRFGCTALHLACKFGCVDTAKYLASV----------------------GEVH---SLWHGQKP-IHLAVMANKTDLVVA 102 (364)
T ss_dssp CCTTCCCHHHHHHHHCCHHHHHHHHHH----------------------CCCC---CCBTTBCH-HHHHHHTTCHHHHHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHC----------------------CCCc---cccCCCCH-HHHHHHcCCHHHHHH
Confidence 345678999999999999999999984 3333 23478999 999999999999999
Q ss_pred HHHh----ccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcC--CcHHHHHHHHhhCCCCCcccc
Q 039483 101 LIER----AKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYE--HSSHTVVAILKSCTSVSHIYM 174 (360)
Q Consensus 101 Ll~~----g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g--~~~~~~~~Ll~~g~~~~~~~~ 174 (360)
|++. |++++..-... .........++..|..|. ||||+|+..| + .+++++|+++|++++.
T Consensus 103 Ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~---------t~L~~A~~~g~~~-~~~v~~Ll~~ga~~~~--- 168 (364)
T 3ljn_A 103 LVEGAKERGQMPESLLNEC-DEREVNEIGSHVKHCKGQ---------TALHWCVGLGPEY-LEMIKILVQLGASPTA--- 168 (364)
T ss_dssp HHHHHHHHTCCHHHHHTCC-CCCCEEEETTEEEEESCC---------CHHHHHHHSCGGG-HHHHHHHHHHTCCTTC---
T ss_pred HHHhccccCCCHHHHHhhc-chHhhhhhccccCCCCCC---------CHHHHHHHcCCch-HHHHHHHHHcCCCCcc---
Confidence 9999 54433200000 000000111233566664 8888889999 8 9999999999999999
Q ss_pred CCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccc-----cccccCCCChHHHHHHHcCCHHHHHHHHhcCCcc
Q 039483 175 KAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSM-----IKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTA 249 (360)
Q Consensus 175 ~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~-----i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~ 249 (360)
+|..|.||||+|+..|+. +++++|++.+ .+ ++..|..|+||||+|+..|+.+++++|+++|+++
T Consensus 169 ~d~~g~t~L~~A~~~g~~----------~~v~~Ll~~g-~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~ 237 (364)
T 3ljn_A 169 KDKADETPLMRAMEFRNR----------EALDLMMDTV-PSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDV 237 (364)
T ss_dssp CCTTSCCHHHHHHHTTCH----------HHHHHHHHHC-SCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCT
T ss_pred cCCCCCCHHHHHHHcCCH----------HHHHHHHhcc-cccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999999 9999999988 55 8899999999999999999999999999999999
Q ss_pred ccccccCCCCchhhhhhcCCccc-cccccc--ccC------------ccCCCCCCcHHHHHHHcCCHHHHHHHhh
Q 039483 250 AKIADKDRKMTALHLVHGPKGCQ-NNMLAS--SLM------------DEGDAKGNTTVHFFAAVHRKEIFDDLSG 309 (360)
Q Consensus 250 ~~~~d~~~g~tpLh~A~~~~~~~-~~~L~~--~~~------------~~~d~~g~Tpl~~A~~~~~~~i~~~l~~ 309 (360)
+.+|. .|+||||+|+..++.+ +++|+. ++. ...+..|+||++.|+..++.+.+..|+.
T Consensus 238 -~~~d~-~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~~~~~v~~ll~ 310 (364)
T 3ljn_A 238 -NMEDN-EHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQ 310 (364)
T ss_dssp -TCCCT-TSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCCHHHHHHHHHHH
T ss_pred -CCCCC-CCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccccccccccchhhhhccCHHHHHHHHH
Confidence 99999 9999999999999999 888874 221 2256789999999999987666665544
|
| >3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=9.8e-31 Score=233.97 Aligned_cols=214 Identities=17% Similarity=0.139 Sum_probs=166.8
Q ss_pred CCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCC----CCCCCCChHHHHHH---hcCCHH
Q 039483 24 QIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQP----VTAKGDTRSRHVAA---KFDHCD 96 (360)
Q Consensus 24 ~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~----~~~~g~tp~Lh~A~---~~g~~~ 96 (360)
+..++||.||+.|+.+.++.|++.-... +..+ +. .|..|.|| ||+|+ ..|+.+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~l~~~------------------~~~~-~~~~~~~~~~g~t~-L~~A~~~~~~g~~~ 63 (260)
T 3jxi_A 4 FNRPILFDIVSRGSPDGLEGLLSFLLTH------------------KKRL-TDEEFREPSTGKTC-LPKALLNLSAGRND 63 (260)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHH------------------TCCT-TSGGGSCTTTCCCH-HHHHHTSCBTTBCT
T ss_pred chHHHHHHHHHhCCHHHHHHHHHHHHhc------------------CCCc-chhhhhccCCCCcH-HHHHHHHhhcCCHH
Confidence 4568999999999999888887732222 3344 43 34779999 99999 779999
Q ss_pred HHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCC
Q 039483 97 IVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKA 176 (360)
Q Consensus 97 ~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d 176 (360)
++++|++.|++...... .....++..|..|. ||||+|+..|+ .+++++|+++|++++. ++
T Consensus 64 ~v~~Ll~~g~~~~~~~~-------~~~~~~~~~d~~g~---------t~L~~A~~~g~-~~~v~~Ll~~ga~~~~---~~ 123 (260)
T 3jxi_A 64 TIPILLDIAEKTGNMRE-------FINSPFRDVYYRGQ---------TALHIAIERRC-KHYVELLVEKGADVHA---QA 123 (260)
T ss_dssp HHHHHHHHHHHTTCHHH-------HHTCCBCCSSEESB---------CHHHHHHHTTC-HHHHHHHHHTTCCTTC---CC
T ss_pred HHHHHHHhcccccchHh-------hhcccccccccCCC---------CHHHHHHHcCC-HHHHHHHHhCCCCcCc---cc
Confidence 99999999977543100 00011222444664 88888999999 9999999999999998 77
Q ss_pred --------------CCCCcHHHHHHhcCCcccccccCChHHHHHHHHh---cCccccccccCCCChHHHHHHHcCC----
Q 039483 177 --------------PMERQALHAATMHIDLCKFNHTLSNDCAVQQLFE---GKKSMIKGIDQCWWTPIHYAAYHRN---- 235 (360)
Q Consensus 177 --------------~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~---~~~~~i~~~d~~g~t~Lh~A~~~~~---- 235 (360)
..|.||||+|+..|+. +++++|++ .+ .+++.+|..|+||||+|+..++
T Consensus 124 ~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~----------~~v~~Ll~~~~~g-a~~~~~d~~g~TpLh~A~~~~~~~~~ 192 (260)
T 3jxi_A 124 RGRFFQPKDEGGYFYFGELPLSLAACTNQP----------HIVHYLTENGHKQ-ADLRRQDSRGNTVLHALVAIADNTRE 192 (260)
T ss_dssp EECCCSSSCCCCSCCSCSSHHHHHHHTTCH----------HHHHHHHHCSSCC-CCTTCCCTTSCCHHHHHHHHCCSSHH
T ss_pred cccccCcccccccccCCCCHHHHHHHcCCH----------HHHHHHHhccccC-CCCcccCCCCCcHHHHHHHhccCchh
Confidence 5788899998888888 88888888 66 7788888888899998888777
Q ss_pred -----HHHHHHHHhcCCccccccccCCCCchhhhhhcCCcccccccccccCccCCCCCCcHHHHHHHcCCHHHHHHHhhh
Q 039483 236 -----YLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQNNMLASSLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGR 310 (360)
Q Consensus 236 -----~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~~~~L~~~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~ 310 (360)
.+++++|+++|+++ +.... ..+.+|..|+||||+|++.|+.++++.|+++
T Consensus 193 ~~~~~~~~v~~Ll~~ga~~-~~~~~------------------------~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ 247 (260)
T 3jxi_A 193 NTKFVTKMYDLLLIKCAKL-FPDTN------------------------LEALLNNDGLSPLMMAAKTGKIGIFQHIIRR 247 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHH-CTTCC------------------------GGGCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCccc-ccccc------------------------hhhcccCCCCCHHHHHHHcCCHHHHHHHHHh
Confidence 68888888888877 32211 2356789999999999999999999999998
Q ss_pred hcc
Q 039483 311 VKA 313 (360)
Q Consensus 311 ~~~ 313 (360)
...
T Consensus 248 g~~ 250 (260)
T 3jxi_A 248 EIA 250 (260)
T ss_dssp HHH
T ss_pred CCC
Confidence 544
|
| >1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-31 Score=242.09 Aligned_cols=222 Identities=17% Similarity=0.073 Sum_probs=188.1
Q ss_pred HHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHhccccCc
Q 039483 31 KVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQH 110 (360)
Q Consensus 31 ~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~ 110 (360)
.+|.+|..+.++.++....... +. .. .... ...+..|.|| ||.||..|+.++|++|+++|++++.
T Consensus 4 ~~a~~~~~~~l~~~~~~~~~~~--~~--------~~---~~~~-~~~~~~~~t~-l~~A~~~g~~~~v~~Ll~~g~~~~~ 68 (299)
T 1s70_B 4 ADAKQKRNEQLKRWIGSETDLE--PP--------VV---KRKK-TKVKFDDGAV-FLAACSSGDTEEVLRLLERGADINY 68 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSC--CS--------CC---CCSC-CCCEECHHHH-HHHHHHHTCHHHHHHHHHHCCCTTC
T ss_pred hHHHHHHHHHHHHHHccccccc--cc--------cc---cCcc-cccccCCccH-HHHHHHcCCHHHHHHHHHcCCCCcc
Confidence 5788888888888887422211 00 00 0111 2344567899 9999999999999999999999988
Q ss_pred ccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcC
Q 039483 111 EDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHI 190 (360)
Q Consensus 111 ~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~ 190 (360)
.|..|. ||||+|+..|+ .+++++|+++|++++. +|..|.||||+|+..|
T Consensus 69 ------------------~~~~g~---------t~L~~A~~~g~-~~~v~~Ll~~ga~~~~---~~~~g~tpL~~A~~~g 117 (299)
T 1s70_B 69 ------------------ANVDGL---------TALHQACIDDN-VDMVKFLVENGANINQ---PDNEGWIPLHAAASCG 117 (299)
T ss_dssp ------------------BCTTCC---------BHHHHHHHTTC-HHHHHHHHHTTCCTTC---CCTTSCCHHHHHHHHT
T ss_pred ------------------cCCCCC---------CHHHHHHHcCC-HHHHHHHHHCCCCCCC---CCCCCCcHHHHHHHcC
Confidence 788885 88888899999 9999999999999999 9999999999999999
Q ss_pred CcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHH-hcCCcccc------------------
Q 039483 191 DLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLIL-KIDRTAAK------------------ 251 (360)
Q Consensus 191 ~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll-~~g~~~~~------------------ 251 (360)
+. +++++|++.+ .+++..+..|.||||+|+..++.+++++++ ..+.++ +
T Consensus 118 ~~----------~~v~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~-~~~~~~~~~~~~~~~~~~l 185 (299)
T 1s70_B 118 YL----------DIAEYLISQG-AHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDI-EAARKEEERIMLRDARQWL 185 (299)
T ss_dssp CH----------HHHHHHHHTT-CCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCH-HHHHHHHHHHHHHHHHHHH
T ss_pred CH----------HHHHHHHhCC-CCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCc-hhhhhhhhhHHHHHHHHHH
Confidence 99 9999999998 889999999999999999999999998877 445544 3
Q ss_pred --------ccccCCCCchhhhhhcCCccc-cccccc--ccCccCCCCCCcHHHHHHHcCCHHHHHHHhhhh
Q 039483 252 --------IADKDRKMTALHLVHGPKGCQ-NNMLAS--SLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGRV 311 (360)
Q Consensus 252 --------~~d~~~g~tpLh~A~~~~~~~-~~~L~~--~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~~ 311 (360)
..+. .|.||||+|+..++.+ +++|+. ++++.+|..|+||||+|++.|+.++++.|++..
T Consensus 186 ~~~~~~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g 255 (299)
T 1s70_B 186 NSGHINDVRHAK-SGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENL 255 (299)
T ss_dssp HHTCCCCCCCTT-TCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred hccCcchhhhcC-CCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcC
Confidence 2455 8999999999999999 888884 899999999999999999999999999999875
|
| >4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-30 Score=217.52 Aligned_cols=151 Identities=25% Similarity=0.238 Sum_probs=132.4
Q ss_pred ChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHH
Q 039483 83 TRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAI 162 (360)
Q Consensus 83 tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~L 162 (360)
++ |+.||+.|+.++|++|+++|++++. +|..|. ||||+|+..++ .+++++|
T Consensus 6 ~~-L~~Aa~~G~~~~v~~Ll~~Gadvn~------------------~d~~g~---------t~l~~a~~~~~-~~~~~~l 56 (169)
T 4gpm_A 6 KR-LIEAAENGNKDRVKDLIENGADVNA------------------SDSDGR---------TPLHHAAENGH-KEVVKLL 56 (169)
T ss_dssp HH-HHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTSC---------CHHHHHHHTTC-HHHHHHH
T ss_pred HH-HHHHHHcCCHHHHHHHHHCCCCCCC------------------cCCCCC---------CHHHHHHHcCC-HHHHHHH
Confidence 35 8999999999999999999999988 788885 77778888888 9999999
Q ss_pred HhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHH
Q 039483 163 LKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLI 242 (360)
Q Consensus 163 l~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~L 242 (360)
++.|++++. +|..|+||||+|+..|+. +++++|++.+ .+++.+|..|+||||+|+..|+.+++++|
T Consensus 57 l~~gad~~~---~d~~g~TpLh~A~~~g~~----------~~v~~Ll~~g-advn~~d~~G~TpLh~A~~~g~~~~v~~L 122 (169)
T 4gpm_A 57 ISKGADVNA---KDSDGRTPLHHAAENGHK----------EVVKLLISKG-ADVNAKDSDGRTPLHHAAENGHKEVVKLL 122 (169)
T ss_dssp HHTTCCTTC---CCTTSCCHHHHHHHTTCH----------HHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred Hhcccchhh---hccCCCCHHHHHHHcCCH----------HHHHHHHHCc-CCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 999999998 999999999999999999 9999999998 88899999999999999999999999999
Q ss_pred HhcCCccccccccCCCCchhhhhhcCCccc-cccccc
Q 039483 243 LKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLAS 278 (360)
Q Consensus 243 l~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~~ 278 (360)
+++|+++ +.+|. .|+||||+|+..++.+ +++|++
T Consensus 123 l~~gad~-~~~d~-~G~TpL~~A~~~g~~~iv~~Ll~ 157 (169)
T 4gpm_A 123 ISKGADV-NTSDS-DGRTPLDLAREHGNEEVVKLLEK 157 (169)
T ss_dssp HHTTCCT-TCCCT-TSCCHHHHHHHTTCHHHHHHHHT
T ss_pred HHcCCCc-cccCC-CCCCHHHHHHHcCCHHHHHHHHH
Confidence 9999998 88887 7777777777777766 666663
|
| >3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-29 Score=221.67 Aligned_cols=193 Identities=19% Similarity=0.148 Sum_probs=175.0
Q ss_pred CCCCCCCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCC
Q 039483 75 QPVTAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEH 154 (360)
Q Consensus 75 ~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~ 154 (360)
+..|..|.|| ||.|+..|+.+++++|++.|++++. .+..|. ||||+|+..|+
T Consensus 3 ~~~d~~~~~~-l~~A~~~g~~~~~~~Ll~~g~~~~~------------------~~~~g~---------t~L~~A~~~~~ 54 (240)
T 3eu9_A 3 THIDDYSTWD-IVKATQYGIYERCRELVEAGYDVRQ------------------PDKENV---------TLLHWAAINNR 54 (240)
T ss_dssp CCCSCGGGCC-HHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTSC---------CHHHHHHHTTC
T ss_pred cccccccchH-HHHHHHcCChHHHHHHHHcCCCcCC------------------CCCCCC---------CHHHHHHHhCC
Confidence 5678889999 9999999999999999999999887 777775 88888899999
Q ss_pred cHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcC
Q 039483 155 SSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHR 234 (360)
Q Consensus 155 ~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~ 234 (360)
.+++++|++.|.+++. ..+..|.||||+|+..|+. +++++|++.+ .+++..+..|.||||+|+..|
T Consensus 55 -~~~v~~Ll~~~~~~~~--~~~~~~~t~L~~A~~~~~~----------~~v~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~ 120 (240)
T 3eu9_A 55 -IDLVKYYISKGAIVDQ--LGGDLNSTPLHWATRQGHL----------SMVVQLMKYG-ADPSLIDGEGCSCIHLAAQFG 120 (240)
T ss_dssp -HHHHHHHHHTTCCTTC--CBTTTTBCHHHHHHHHTCH----------HHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTT
T ss_pred -HHHHHHHHHcCCcchh--hcCCcCCChhHHHHHcCCH----------HHHHHHHHcC-CCCcccCCCCCCHHHHHHHcC
Confidence 9999999999998876 1445699999999999999 9999999998 888999999999999999999
Q ss_pred CHHHHHHHHhcCCccccccccCCCCchhhhhhcCCcc-c-ccccc--cccCccCCC-CCCcHHHHHHHcCCHHHHHHHhh
Q 039483 235 NYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGC-Q-NNMLA--SSLMDEGDA-KGNTTVHFFAAVHRKEIFDDLSG 309 (360)
Q Consensus 235 ~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~-~-~~~L~--~~~~~~~d~-~g~Tpl~~A~~~~~~~i~~~l~~ 309 (360)
+.+++++|+++|+++ +.++. .|.||||+|+..++. + +++|+ +++++..+. .|+||||+|++.|+.++++.|++
T Consensus 121 ~~~~~~~Ll~~~~~~-~~~~~-~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 198 (240)
T 3eu9_A 121 HTSIVAYLIAKGQDV-DMMDQ-NGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLE 198 (240)
T ss_dssp CHHHHHHHHHTTCCT-TCCCT-TSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCc-cccCC-CCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHH
Confidence 999999999999999 99999 999999999976664 4 67776 488888887 89999999999999999999998
Q ss_pred hh
Q 039483 310 RV 311 (360)
Q Consensus 310 ~~ 311 (360)
+.
T Consensus 199 ~g 200 (240)
T 3eu9_A 199 AG 200 (240)
T ss_dssp HT
T ss_pred cC
Confidence 74
|
| >2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-30 Score=233.24 Aligned_cols=164 Identities=15% Similarity=0.093 Sum_probs=122.2
Q ss_pred ccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHH
Q 039483 71 QKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAA 150 (360)
Q Consensus 71 ~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~ 150 (360)
+.. +..|..|.|| ||.||..|+.++|+.|++.+.+....-.. .....|..|. ||||+|+
T Consensus 4 a~~-~~~d~~g~t~-L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~----------~~~~~~~~g~---------tpL~~A~ 62 (273)
T 2pnn_A 4 AGE-KPPRLYDRRS-IFDAVAQSNCQELESLLPFLQRSKKRLTD----------SEFKDPETGK---------TCLLKAM 62 (273)
T ss_dssp --------CCCHHH-HHHHHHTTCSSTTTTHHHHHHHSCCCTTS----------GGGSCTTTCC---------CHHHHHH
T ss_pred ccC-CCCCcccchH-HHHHHHcCCHHHHHHHHHHHhhcccccCC----------cccccCcCCC---------CHHHHHH
Confidence 344 6788999999 99999999999999999865433210000 0001466775 7777777
Q ss_pred hc---CCcHHHHHHHHhhCCCCC-------c-cccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccc
Q 039483 151 EY---EHSSHTVVAILKSCTSVS-------H-IYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGI 219 (360)
Q Consensus 151 ~~---g~~~~~~~~Ll~~g~~~~-------~-~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~ 219 (360)
.. |+ .+++++|++.|+++. . ...+|..|.||||+|+..|+. +++++|++.+ .+++..
T Consensus 63 ~~~~~g~-~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~----------~~v~~Ll~~g-a~~~~~ 130 (273)
T 2pnn_A 63 LNLHNGQ-NDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNM----------TLVTLLVENG-ADVQAA 130 (273)
T ss_dssp HSCBTTB-CHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCH----------HHHHHHHHTT-CCTTCC
T ss_pred HHHhcCC-hHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCH----------HHHHHHHHCC-CCcCcc
Confidence 65 88 999999999985421 1 001466899999999999999 9999999998 888888
Q ss_pred cC--------------CCChHHHHHHHcCCHHHHHHHHh---cCCccccccccCCCCchhhhhhcCC
Q 039483 220 DQ--------------CWWTPIHYAAYHRNYLILKLILK---IDRTAAKIADKDRKMTALHLVHGPK 269 (360)
Q Consensus 220 d~--------------~g~t~Lh~A~~~~~~~~v~~Ll~---~g~~~~~~~d~~~g~tpLh~A~~~~ 269 (360)
+. .|+||||+|+..|+.+++++|++ .|+++ +.+|. .|+||||+|+..+
T Consensus 131 ~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~-~~~d~-~g~tpLh~A~~~~ 195 (273)
T 2pnn_A 131 ANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADI-SARDS-VGNTVLHALVEVA 195 (273)
T ss_dssp BCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCT-TCCCT-TSCCHHHHHHHHC
T ss_pred ccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCc-eeeCC-CCCcHHHHHHHcc
Confidence 86 79999999999999999999999 88888 77776 6666666665433
|
| >1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.96 E-value=9.5e-31 Score=242.59 Aligned_cols=219 Identities=16% Similarity=0.079 Sum_probs=166.8
Q ss_pred CCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcc-----cC----------Cc-------------ccccc-ccccccccc
Q 039483 23 PQIDPNLFKVAAAGNLEPFKDMAREVIESLLTA-----RS----------RT-------------QSCIS-TSNCRRQKM 73 (360)
Q Consensus 23 ~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~-----~~----------~t-------------~~~v~-l~~~~~~~~ 73 (360)
..+.++++ |+.++++.|++...+...+. .+ .+ .++++ +... +.++
T Consensus 50 ~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~-g~dv 123 (327)
T 1sw6_A 50 PSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNT-QLNL 123 (327)
T ss_dssp CCCCCCCH-----HHHHHHHHHHHHHHC-------------------------------CHHHHHHHHHHHCTTS-CCCS
T ss_pred CCCCcccC-----chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHhhHHHHHHHHHhc-CCCc
Confidence 34555555 99999999999654322100 00 00 44555 7777 8999
Q ss_pred cCC-CCCCCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhc
Q 039483 74 CQP-VTAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEY 152 (360)
Q Consensus 74 ~~~-~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~ 152 (360)
+. +|..|.|| ||+||..|+.++|++|+++|++++. +|..|. ||||+|+..
T Consensus 124 -n~~~d~~g~Tp-Lh~Aa~~g~~~~v~~Ll~~Gad~n~------------------~d~~g~---------TpLh~A~~~ 174 (327)
T 1sw6_A 124 -NIPVDEHGNTP-LHWLTSIANLELVKHLVKHGSNRLY------------------GDNMGE---------SCLVKAVKS 174 (327)
T ss_dssp -CSCCSTTCCCH-HHHHHHTTCHHHHHHHHHTTCCTTB------------------CCTTCC---------CHHHHHHHS
T ss_pred -ccccCCCCCcH-HHHHHHcCCHHHHHHHHHcCCCCCC------------------cCCCCC---------CHHHHHHHh
Confidence 88 89999999 9999999999999999999999998 888886 666666666
Q ss_pred CCc--HHHHHHHHhhC-CCCCccccCCCCCCcHHHHHHh----cCCcccccccCChHHHHHHHHhcC-------------
Q 039483 153 EHS--SHTVVAILKSC-TSVSHIYMKAPMERQALHAATM----HIDLCKFNHTLSNDCAVQQLFEGK------------- 212 (360)
Q Consensus 153 g~~--~~~~~~Ll~~g-~~~~~~~~~d~~g~t~Lh~A~~----~~~~~~~~~~~~~~~~~~~Ll~~~------------- 212 (360)
|+. .++++.|++.+ .+++. +|..|+||||+|+. .|+. +++++|++.+
T Consensus 175 g~~~~~~~~~~ll~~~~~~~~~---~d~~g~tpLh~A~~~~~~~g~~----------~~v~~Ll~~~~~~~~~~~~~~i~ 241 (327)
T 1sw6_A 175 VNNYDSGTFEALLDYLYPCLIL---EDSMNRTILHHIIITSGMTGCS----------AAAKYYLDILMGWIVKKQNRPIQ 241 (327)
T ss_dssp SHHHHTTCHHHHHHHHGGGGGE---ECTTCCCHHHHHHHHHTSTTCH----------HHHHHHHHHHHHHHHHGGGCCEE
T ss_pred cccccHHHHHHHHHhhhccccC---CCCCCCCHHHHHHHHccccccH----------HHHHHHHHHHHHHHhcccchHHH
Confidence 541 36778888876 66888 99999999999999 8899 9999999873
Q ss_pred ------ccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-ccccc--cccCcc
Q 039483 213 ------KSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLA--SSLMDE 283 (360)
Q Consensus 213 ------~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~--~~~~~~ 283 (360)
..+++..+..|+||||.|+. +++|++++ + +.+|. .|+||||+|+..++.+ +++|+ +++++.
T Consensus 242 ~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~~--~-n~~d~-~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~ 311 (327)
T 1sw6_A 242 SGTNEKESKPNDKNGERKDSILENLD------LKWIIANM--L-NAQDS-NGDTCLNIAARLGNISIVDALLDYGADPFI 311 (327)
T ss_dssp EC----------------CHHHHHCS------HHHHHHHT--T-TCCCT-TSCCHHHHHHHHCCHHHHHHHHHTTCCTTC
T ss_pred hhhhcccCCcccccccCCChhHHHHH------HHHHHHhC--C-CCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCcc
Confidence 37788899999999999986 88999884 5 77898 9999999999999999 89988 499999
Q ss_pred CCCCCCcHHHHHHHcC
Q 039483 284 GDAKGNTTVHFFAAVH 299 (360)
Q Consensus 284 ~d~~g~Tpl~~A~~~~ 299 (360)
+|..|+||||+|+++|
T Consensus 312 ~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 312 ANKSGLRPVDFGAGLE 327 (327)
T ss_dssp CCTTSCCGGGGTCC--
T ss_pred cCCCCCCHHHHHHhcC
Confidence 9999999999998764
|
| >3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A | Back alignment and structure |
|---|
Probab=99.96 E-value=4.2e-29 Score=209.36 Aligned_cols=169 Identities=16% Similarity=0.103 Sum_probs=147.5
Q ss_pred CHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHhc
Q 039483 26 DPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIERA 105 (360)
Q Consensus 26 ~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g 105 (360)
.+|||.||..|+.+.++.|++.. +..+ +.+|..|.|| ||+|+..|+.+++++|+++|
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~---------------------~~~~-~~~~~~g~t~-L~~A~~~~~~~~v~~Ll~~g 59 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKG---------------------DNLV-NKPDERGFTP-LIWASAFGEIETVRFLLEWG 59 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTC---------------------SGGG-GCCCTTSCCH-HHHHHHTTCHHHHHHHHHHT
T ss_pred hhhHHHHHHcCCHHHHHHHHHcC---------------------cccc-cCCCCCCCCH-HHHHHHcCCHHHHHHHHHcC
Confidence 36799999999999999998832 3345 7888999999 99999999999999999999
Q ss_pred cccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHH
Q 039483 106 KLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHA 185 (360)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~ 185 (360)
++++. .|..|. ||||+|+..|+ .+++++|+++|++++. +|..|.||||+
T Consensus 60 ~~~~~------------------~~~~g~---------t~L~~A~~~~~-~~~v~~Ll~~g~~~~~---~~~~g~t~L~~ 108 (172)
T 3v30_A 60 ADPHI------------------LAKERE---------SALSLASTGGY-TDIVGLLLERDVDINI---YDWNGGTPLLY 108 (172)
T ss_dssp CCTTC------------------CCTTCC---------CHHHHHHHTTC-HHHHHHHHTTTCCTTC---CCTTSCCHHHH
T ss_pred CCchh------------------hcccCC---------CHHHHHHHCCC-HHHHHHHHHcCCCCCC---CCCCCCCHHHH
Confidence 99887 777775 77888888999 9999999999999999 99999999999
Q ss_pred HHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCch
Q 039483 186 ATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTA 261 (360)
Q Consensus 186 A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tp 261 (360)
|+..++. +++++|++.+ .+++.+|..|+||||+|+..|+.+++++|+++|+++ ..++. .|.||
T Consensus 109 A~~~~~~----------~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~-~~~~~-~~~~p 171 (172)
T 3v30_A 109 AVRGNHV----------KCVEALLARG-ADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKL-FQSNL-VPADP 171 (172)
T ss_dssp HHHTTCH----------HHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHH-SCC--------
T ss_pred HHHcCCH----------HHHHHHHHcC-CCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHH-hcccC-CCCCC
Confidence 9999999 9999999998 889999999999999999999999999999999998 77777 77776
|
| >4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.6e-29 Score=227.35 Aligned_cols=190 Identities=16% Similarity=0.131 Sum_probs=172.1
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHH
Q 039483 79 AKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHT 158 (360)
Q Consensus 79 ~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~ 158 (360)
..+.++ +|.|+..|+.+.++.+++.+.+ ..++..|..|. ||||+|+..|+ .++
T Consensus 74 ~~~~~~-l~~a~~~~~~~~~~~l~~~~~~----------------~~~n~~d~~g~---------T~Lh~A~~~g~-~~~ 126 (276)
T 4hbd_A 74 LACRSD-AHPELVRRHLVTFRAMSARLLD----------------YVVNIADSNGN---------TALHYSVSHAN-FPV 126 (276)
T ss_dssp HHHSTT-CCHHHHHHHHHHHHHHCHHHHH----------------HHHTCCCTTSC---------CHHHHHHHTTC-HHH
T ss_pred HHhccC-CCHHHHHHHHHHHHHHHHHHHh----------------hcCcCCCCCCC---------CHHHHHHHCCC-HHH
Confidence 345688 9999999999999999988765 22334888885 88888899999 999
Q ss_pred HHHHHhhCC-CCCccccCCCCCCcHHHHHH-----hcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHH
Q 039483 159 VVAILKSCT-SVSHIYMKAPMERQALHAAT-----MHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAY 232 (360)
Q Consensus 159 ~~~Ll~~g~-~~~~~~~~d~~g~t~Lh~A~-----~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~ 232 (360)
+++|++.|+ +++. .+..|.||||+|+ ..++. ++++.|++.+ ..++..+..|+||||+|+.
T Consensus 127 v~~Ll~~g~~~~~~---~~~~g~tpL~~a~~~~~~~~~~~----------~~v~~Ll~~g-~~~~~~~~~g~tpLh~A~~ 192 (276)
T 4hbd_A 127 VQQLLDSGVCKVDK---QNRAGYSPIMLTALATLKTQDDI----------ETVLQLFRLG-NINAKASQAGQTALMLAVS 192 (276)
T ss_dssp HHHHHHTSCCCTTC---CCTTSCCHHHHGGGCCCCSHHHH----------HHHHHHHHHS-CTTCCCTTTCCCHHHHHHH
T ss_pred HHHHHHCCCCcCCC---CCCCCCCHHHHHHHHHhhhhhhH----------HHHHHHHHcC-CCccccCCCCCCHHHHHHH
Confidence 999999998 8998 9999999999999 56778 9999999999 7778889999999999999
Q ss_pred cCCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-cccccc---ccCccCCCCCCcHHHHHHHcCCHHHHHHHh
Q 039483 233 HRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLAS---SLMDEGDAKGNTTVHFFAAVHRKEIFDDLS 308 (360)
Q Consensus 233 ~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~~---~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~ 308 (360)
.|+.+++++|+++|+++ +.+|. .|+||||+|+..++.+ +++|+. ++++.+|..|+||||+|++.|+.++++.|+
T Consensus 193 ~g~~~~v~~Ll~~gad~-n~~d~-~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll 270 (276)
T 4hbd_A 193 HGRVDVVKALLACEADV-NVQDD-DGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLY 270 (276)
T ss_dssp TTCHHHHHHHHHTTCCT-TCCCT-TSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred cCCHHHHHHHHhCCCCC-CCCCC-CCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 99999999999999999 99999 9999999999999999 888874 889999999999999999999999999998
Q ss_pred hhh
Q 039483 309 GRV 311 (360)
Q Consensus 309 ~~~ 311 (360)
++.
T Consensus 271 ~~~ 273 (276)
T 4hbd_A 271 SRM 273 (276)
T ss_dssp HHC
T ss_pred hcc
Confidence 874
|
| >1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-28 Score=203.54 Aligned_cols=159 Identities=17% Similarity=0.108 Sum_probs=144.6
Q ss_pred CCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHH
Q 039483 24 QIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIE 103 (360)
Q Consensus 24 ~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~ 103 (360)
...++||.|+..|+.+.++.|++. +..+ +.+|..|.|| ||+|+. |+.+++++|++
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~----------------------~~~~-~~~~~~g~t~-L~~A~~-~~~~~v~~Ll~ 58 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQN----------------------NVNV-NAQNGFGRTA-LQVMKL-GNPEIARRLLL 58 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTS----------------------CCCT-TCCCTTSCCH-HHHCCS-SCHHHHHHHHH
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhC----------------------CCCc-cccCccCccH-HHHHHc-CcHHHHHHHHH
Confidence 345899999999999999999873 6667 8889999999 999999 99999999999
Q ss_pred hccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHH
Q 039483 104 RAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQAL 183 (360)
Q Consensus 104 ~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~L 183 (360)
+|++++. +|..|. ||||+|+..|+ .+++++|+++|++++. +|..|.|||
T Consensus 59 ~g~~~~~------------------~~~~g~---------t~L~~A~~~~~-~~~v~~Ll~~g~~~~~---~~~~g~t~L 107 (162)
T 1ihb_A 59 RGANPDL------------------KDRTGF---------AVIHDAARAGF-LDTLQTLLEFQADVNI---EDNEGNLPL 107 (162)
T ss_dssp TTCCTTC------------------CCTTSC---------CHHHHHHHHTC-HHHHHHHHHTTCCTTC---CCTTSCCHH
T ss_pred cCCCCCC------------------CCCCCC---------CHHHHHHHcCC-HHHHHHHHHcCCCCCC---cCCCCCCHH
Confidence 9999988 777875 78888889999 9999999999999999 999999999
Q ss_pred HHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCc
Q 039483 184 HAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRT 248 (360)
Q Consensus 184 h~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~ 248 (360)
|+|+..|+. +++++|++.+...++..|..|+||||+|+..|+.+++++|+++|++
T Consensus 108 ~~A~~~~~~----------~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 108 HLAAKEGHL----------RVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HHHHHTTCH----------HHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred HHHHHcCCH----------HHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 999999999 9999999999555789999999999999999999999999999975
|
| >2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.5e-31 Score=231.90 Aligned_cols=194 Identities=12% Similarity=-0.004 Sum_probs=169.2
Q ss_pred CCCCCCCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCC
Q 039483 75 QPVTAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEH 154 (360)
Q Consensus 75 ~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~ 154 (360)
+..+.+|.|| ||.|+..|+.+++++|++.|++++. +|..|. ||||+|+..|+
T Consensus 15 ~~~~~~~~t~-L~~A~~~g~~~~v~~Ll~~g~~~~~------------------~d~~g~---------tpLh~A~~~g~ 66 (229)
T 2vge_A 15 RRARLNPLVL-LLDAALTGELEVVQQAVKEMNDPSQ------------------PNEEGI---------TALHNAICGAN 66 (229)
T ss_dssp CCTTSCHHHH-HHHHHHHTCHHHHHHHHHHSSCTTC------------------CCTTSC---------CHHHHHHHTTC
T ss_pred cccccchhHH-HHHHHHcCCHHHHHHHHhcCCCCCC------------------CCCCCC---------CHHHHHHHcCC
Confidence 5566678899 9999999999999999999999988 788885 88888899999
Q ss_pred cHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCcccccccc-CCCChHHHHH--H
Q 039483 155 SSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGID-QCWWTPIHYA--A 231 (360)
Q Consensus 155 ~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d-~~g~t~Lh~A--~ 231 (360)
.+++++|++.|++++. +|..|.||||+|+..|+. +++++|++.+ .+++..+ ..|+||||+| +
T Consensus 67 -~~~v~~Ll~~ga~~n~---~d~~g~tpLh~A~~~g~~----------~~v~~Ll~~g-a~~~~~~~~~g~tpL~~A~a~ 131 (229)
T 2vge_A 67 -YSIVDFLITAGANVNS---PDSHGWTPLHCAASCNDT----------VICMALVQHG-AAIFATTLSDGATAFEKCDPY 131 (229)
T ss_dssp -HHHHHHHHHTTCCTTC---CCTTCCCHHHHHHHTTCH----------HHHHHHHTTT-CCTTCCCSSTTCCTGGGCCTT
T ss_pred -HHHHHHHHHCCCCCCC---CCCCCCCHHHHHHHcCCH----------HHHHHHHHcC-CCcccccCCCCCCHHHHHHHH
Confidence 9999999999999999 999999999999999999 9999999998 7788886 6999999999 9
Q ss_pred HcCCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCcccccccc--ccc--CccCCCCCCcHHHHHHHcCCHHHHHH-
Q 039483 232 YHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQNNMLA--SSL--MDEGDAKGNTTVHFFAAVHRKEIFDD- 306 (360)
Q Consensus 232 ~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~~~~L~--~~~--~~~~d~~g~Tpl~~A~~~~~~~i~~~- 306 (360)
..|+.+++++|+++|+++ +.++. .|.||++.++..... ++|+ +++ ++.+|..|+||||+|++.|+.++++.
T Consensus 132 ~~~~~~~v~~Ll~~ga~~-~~~~~-~~~~~l~~~~~~~~~--~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~~ 207 (229)
T 2vge_A 132 REGYADCATYLADVEQSM-GLMNS-GAVYALWDYSAEFGD--ELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRN 207 (229)
T ss_dssp STTHHHHHHHHHHHHHHT-TTSGG-GEEEESSCBCCSSTT--BCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEGG
T ss_pred hcChHHHHHHHHHcCCCc-ccccC-CchHHHHHHhhcccc--ccCccccccccccccCCCcccHHHHHHHcCCcceeehh
Confidence 999999999999999999 99999 999999976555433 3444 344 78899999999999999999999874
Q ss_pred Hhhhhcccc
Q 039483 307 LSGRVKATM 315 (360)
Q Consensus 307 l~~~~~~~~ 315 (360)
+++..+...
T Consensus 208 ~l~~~p~~~ 216 (229)
T 2vge_A 208 YFGLFPRVK 216 (229)
T ss_dssp GEESSCCCC
T ss_pred hhhhCCCCC
Confidence 444443333
|
| >2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.5e-29 Score=211.70 Aligned_cols=150 Identities=15% Similarity=0.045 Sum_probs=131.8
Q ss_pred ccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHH
Q 039483 71 QKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAA 150 (360)
Q Consensus 71 ~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~ 150 (360)
.++ +.+|..|.|| ||+|+..|+.+++++|+++|++++. .|..|. ||||+|+
T Consensus 26 ~~~-n~~d~~g~t~-L~~A~~~g~~~~v~~Ll~~~~~~~~------------------~~~~g~---------t~L~~A~ 76 (192)
T 2rfm_A 26 FLR-NYRDSYNRTP-LMVACMLGMENAIDKLVENFDKLED------------------KDIEGS---------TALIWAV 76 (192)
T ss_dssp HHH-TCCCTTCCCH-HHHHHHHTCGGGHHHHHHHHCCTTC------------------CCTTSC---------CHHHHHH
T ss_pred HHH-hCcCCCCCCH-HHHHHHcCCHHHHHHHHHhcccccc------------------ccccCc---------cHHHHHH
Confidence 345 7789999999 9999999999999999999998887 777775 7888888
Q ss_pred hcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHH
Q 039483 151 EYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYA 230 (360)
Q Consensus 151 ~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A 230 (360)
..|+ .+++++|+++|++++. +|..|.||||+|+..++. +++++|++.+ .+++..|..|+||||+|
T Consensus 77 ~~~~-~~~v~~Ll~~g~~~~~---~~~~g~t~L~~A~~~~~~----------~~v~~Ll~~g-~~~~~~~~~g~t~L~~A 141 (192)
T 2rfm_A 77 KNNR-LGIAEKLLSKGSNVNT---KDFSGKTPLMWSIIFGYS----------EMSYFLLEHG-ANVNDRNLEGETPLIVA 141 (192)
T ss_dssp HTTC-HHHHHHHHHHTCCTTC---CCTTSCCHHHHHHHHTCH----------HHHHHHHHTT-CCSSCCCTTCCCHHHHH
T ss_pred HcCC-HHHHHHHHHCCCCCCC---CCCCCCcHHHHHHHcCCH----------HHHHHHHHCC-CCCCCCCCCCCCHHHHH
Confidence 8999 9999999999999999 999999999999999999 9999999998 88999999999999999
Q ss_pred HHcCCHHHHHHHHhcCCccccccccCCCCchhhhhh
Q 039483 231 AYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVH 266 (360)
Q Consensus 231 ~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~ 266 (360)
+..|+.+++++|+++|+++ +.+|. .|.||||+|+
T Consensus 142 ~~~~~~~~v~~Ll~~ga~~-~~~~~-~g~t~l~~A~ 175 (192)
T 2rfm_A 142 SKYGRSEIVKKLLELGADI-SARDL-TGLTAEASAR 175 (192)
T ss_dssp HHHTCHHHHHHHHHTTCCT-TCBCT-TSCBHHHHHH
T ss_pred HHcCCHHHHHHHHHCCCCC-CCcCC-CCCCHHHHHH
Confidence 9999999999999999888 55555 4444444333
|
| >1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.96 E-value=5.7e-29 Score=230.61 Aligned_cols=214 Identities=12% Similarity=0.091 Sum_probs=166.5
Q ss_pred ccccc-ccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHhccccCcccc--------------ccccc------
Q 039483 60 QSCIS-TSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDE--------------ELESG------ 118 (360)
Q Consensus 60 ~~~v~-l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~--------------~~~~~------ 118 (360)
.++++ |.+. +..+ +..+..|.|+ ++ |+.++|+.|+++|++++...- .+.+.
T Consensus 32 ~dlv~~ll~~-ga~i-~~~~~~g~~~-~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 103 (327)
T 1sw6_A 32 HDLTSDFLSS-PLKI-MKALPSPVVN-DN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHV 103 (327)
T ss_dssp TTCCCSTTTS-SCCC-EECBCCCCCC-CH-----HHHHHHHHHHHHHHC-------------------------------
T ss_pred CchHHHHhhC-Cccc-ccCCCCCCcc-cC-----chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHH
Confidence 45555 6666 8999 9999999999 88 999999999999988654110 00010
Q ss_pred ------chhhHHH------hhc-ccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHH
Q 039483 119 ------VGASRQM------IRM-TNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHA 185 (360)
Q Consensus 119 ------~~~~~~~------l~~-~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~ 185 (360)
.++.+.+ ++. +|..|. ||||+|+..|+ .+++++|+++|++++. +|..|+||||+
T Consensus 104 a~~~~~~~~~~~l~~~g~dvn~~~d~~g~---------TpLh~Aa~~g~-~~~v~~Ll~~Gad~n~---~d~~g~TpLh~ 170 (327)
T 1sw6_A 104 SFDSLLQEVNDAFPNTQLNLNIPVDEHGN---------TPLHWLTSIAN-LELVKHLVKHGSNRLY---GDNMGESCLVK 170 (327)
T ss_dssp CHHHHHHHHHHHCTTSCCCSCSCCSTTCC---------CHHHHHHHTTC-HHHHHHHHHTTCCTTB---CCTTCCCHHHH
T ss_pred HHHhhHHHHHHHHHhcCCCcccccCCCCC---------cHHHHHHHcCC-HHHHHHHHHcCCCCCC---cCCCCCCHHHH
Confidence 1111222 344 677775 88888899999 9999999999999999 99999999999
Q ss_pred HHhcCC---cccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHH----cCCHHHHHHHHhc-------------
Q 039483 186 ATMHID---LCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAY----HRNYLILKLILKI------------- 245 (360)
Q Consensus 186 A~~~~~---~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~----~~~~~~v~~Ll~~------------- 245 (360)
|+..|+ . ++++.|++.+..+++.+|..|+||||+|+. .|+.+++++|++.
T Consensus 171 A~~~g~~~~~----------~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i 240 (327)
T 1sw6_A 171 AVKSVNNYDS----------GTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPI 240 (327)
T ss_dssp HHHSSHHHHT----------TCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCE
T ss_pred HHHhcccccH----------HHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHH
Confidence 999998 7 788888888767789999999999999999 8999999999977
Q ss_pred -------CCccccccccCCCCchhhhhhcCCcccccccccccCccCCCCCCcHHHHHHHcCCHHHHHHHhhhh
Q 039483 246 -------DRTAAKIADKDRKMTALHLVHGPKGCQNNMLASSLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGRV 311 (360)
Q Consensus 246 -------g~~~~~~~d~~~g~tpLh~A~~~~~~~~~~L~~~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~~ 311 (360)
|+++ +.++. .|.||||.|+. +++|++.+++.+|..|+||||+|++.|+.++++.|+++.
T Consensus 241 ~~~~~~~g~~~-~~~~~-~g~t~L~~a~~-----~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~G 306 (327)
T 1sw6_A 241 QSGTNEKESKP-NDKNG-ERKDSILENLD-----LKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYG 306 (327)
T ss_dssp EEC------------------CHHHHHCS-----HHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTT
T ss_pred HhhhhcccCCc-ccccc-cCCChhHHHHH-----HHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 8898 99999 99999999975 777888889999999999999999999999999999874
|
| >4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.8e-29 Score=226.28 Aligned_cols=191 Identities=17% Similarity=0.177 Sum_probs=164.6
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHhcc
Q 039483 27 PNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIERAK 106 (360)
Q Consensus 27 ~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~ 106 (360)
+++|.|+..|+.+.++.+++...+ ..+ +.+|..|.|| ||+||..|+.+++++|++.|+
T Consensus 78 ~~l~~a~~~~~~~~~~~l~~~~~~--------------------~~~-n~~d~~g~T~-Lh~A~~~g~~~~v~~Ll~~g~ 135 (276)
T 4hbd_A 78 SDAHPELVRRHLVTFRAMSARLLD--------------------YVV-NIADSNGNTA-LHYSVSHANFPVVQQLLDSGV 135 (276)
T ss_dssp TTCCHHHHHHHHHHHHHHCHHHHH--------------------HHH-TCCCTTSCCH-HHHHHHTTCHHHHHHHHHTSC
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHh--------------------hcC-cCCCCCCCCH-HHHHHHCCCHHHHHHHHHCCC
Confidence 446777788888888887774332 235 7899999999 999999999999999999998
Q ss_pred -ccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHH
Q 039483 107 -LVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHA 185 (360)
Q Consensus 107 -~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~ 185 (360)
+++. .|..|.||||+|+- ..+...++ .+++++|++.|..++. .+..|.||||+
T Consensus 136 ~~~~~------------------~~~~g~tpL~~a~~----~~~~~~~~-~~~v~~Ll~~g~~~~~---~~~~g~tpLh~ 189 (276)
T 4hbd_A 136 CKVDK------------------QNRAGYSPIMLTAL----ATLKTQDD-IETVLQLFRLGNINAK---ASQAGQTALML 189 (276)
T ss_dssp CCTTC------------------CCTTSCCHHHHGGG----CCCCSHHH-HHHHHHHHHHSCTTCC---CTTTCCCHHHH
T ss_pred CcCCC------------------CCCCCCCHHHHHHH----HHhhhhhh-HHHHHHHHHcCCCccc---cCCCCCCHHHH
Confidence 8887 88899766655531 01114567 9999999999988888 89999999999
Q ss_pred HHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHh-cCCccccccccCCCCchhhh
Q 039483 186 ATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILK-IDRTAAKIADKDRKMTALHL 264 (360)
Q Consensus 186 A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~-~g~~~~~~~d~~~g~tpLh~ 264 (360)
|+..|+. +++++|++.+ .+++.+|..|+||||+|+..|+.+++++|++ .|+++ +.+|. .|+||||+
T Consensus 190 A~~~g~~----------~~v~~Ll~~g-ad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~-~~~d~-~g~TpL~~ 256 (276)
T 4hbd_A 190 AVSHGRV----------DVVKALLACE-ADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDI-SLTDR-DGSTALMV 256 (276)
T ss_dssp HHHTTCH----------HHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCT-TCCCT-TSCCHHHH
T ss_pred HHHcCCH----------HHHHHHHhCC-CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCC-cCcCC-CCCCHHHH
Confidence 9999999 9999999998 8899999999999999999999999999998 89999 99999 99999999
Q ss_pred hhcCCccc-cccccc
Q 039483 265 VHGPKGCQ-NNMLAS 278 (360)
Q Consensus 265 A~~~~~~~-~~~L~~ 278 (360)
|+..++.+ +++|++
T Consensus 257 A~~~g~~~iv~~Ll~ 271 (276)
T 4hbd_A 257 ALDAGQSEIASMLYS 271 (276)
T ss_dssp HHHHTCHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHh
Confidence 99999988 777764
|
| >3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-28 Score=205.58 Aligned_cols=166 Identities=16% Similarity=0.076 Sum_probs=138.2
Q ss_pred CCChHHHHHHhcCCHHHHHHHHHhccc-cCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHH
Q 039483 81 GDTRSRHVAAKFDHCDIVSVLIERAKL-VQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTV 159 (360)
Q Consensus 81 g~tp~Lh~A~~~g~~~~v~~Ll~~g~~-~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~ 159 (360)
+.|| ||.|+..|+.++++.|++.+.+ ++. .|..|. ||||+|+..|+ .+++
T Consensus 2 ~~~~-L~~A~~~g~~~~v~~ll~~~~~~~~~------------------~~~~g~---------t~L~~A~~~~~-~~~v 52 (172)
T 3v30_A 2 DSLS-IHQLAAQGELDQLKEHLRKGDNLVNK------------------PDERGF---------TPLIWASAFGE-IETV 52 (172)
T ss_dssp --CC-HHHHHHTTCHHHHHHHHTTCSGGGGC------------------CCTTSC---------CHHHHHHHTTC-HHHH
T ss_pred chhh-HHHHHHcCCHHHHHHHHHcCcccccC------------------CCCCCC---------CHHHHHHHcCC-HHHH
Confidence 4688 9999999999999999999876 454 777775 78888889999 9999
Q ss_pred HHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHH
Q 039483 160 VAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLIL 239 (360)
Q Consensus 160 ~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v 239 (360)
++|+++|++++. ++..|.||||+|+..++. +++++|++.+ .+++..|..|+||||+|+..|+.+++
T Consensus 53 ~~Ll~~g~~~~~---~~~~g~t~L~~A~~~~~~----------~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v 118 (172)
T 3v30_A 53 RFLLEWGADPHI---LAKERESALSLASTGGYT----------DIVGLLLERD-VDINIYDWNGGTPLLYAVRGNHVKCV 118 (172)
T ss_dssp HHHHHHTCCTTC---CCTTCCCHHHHHHHTTCH----------HHHHHHHTTT-CCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHcCCCchh---hcccCCCHHHHHHHCCCH----------HHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCHHHH
Confidence 999999999999 999999999999999999 9999999998 88999999999999999999999999
Q ss_pred HHHHhcCCccccccccCCCCchhhhhhcCCccc-cccccc--ccCccCCCCCCcH
Q 039483 240 KLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLAS--SLMDEGDAKGNTT 291 (360)
Q Consensus 240 ~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~~--~~~~~~d~~g~Tp 291 (360)
++|+++|+++ +.++. .|+||||+|+..++.+ +++|+. ++...++..|.||
T Consensus 119 ~~Ll~~ga~~-~~~~~-~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 119 EALLARGADL-TTEAD-SGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPADP 171 (172)
T ss_dssp HHHHHTTCCT-TCCCT-TSCCHHHHHHHHTCHHHHHHHHHHHHHHSCC-------
T ss_pred HHHHHcCCCc-cccCC-CCCCHHHHHHHhCcHHHHHHHHHHHHHHhcccCCCCCC
Confidence 9999999998 88887 7777777777777766 666663 5556666666665
|
| >2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* | Back alignment and structure |
|---|
Probab=99.96 E-value=8.7e-28 Score=201.00 Aligned_cols=159 Identities=23% Similarity=0.262 Sum_probs=136.3
Q ss_pred CCCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHH
Q 039483 22 QPQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVL 101 (360)
Q Consensus 22 ~~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~L 101 (360)
.....++|+.||+.|+.++++.|++. +.++ +.+|..|.|| ||+|+..|+.+++++|
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~----------------------g~~~-~~~~~~g~t~-L~~A~~~~~~~~v~~L 66 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMAN----------------------GADV-NAEDASGWTP-LHLAAFNGHLEIVEVL 66 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHT----------------------TCCT-TCCCTTSCCH-HHHHHHTTCHHHHHHH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHC----------------------CCCC-CCCCCCCCCH-HHHHHHcCCHHHHHHH
Confidence 34456789999999999999999883 5566 7788889999 9999999999999999
Q ss_pred HHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCc
Q 039483 102 IERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQ 181 (360)
Q Consensus 102 l~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t 181 (360)
+++|++++. .|..|. ||||+|+..|+ .+++++|+++|++++. +|..|.|
T Consensus 67 l~~g~~~~~------------------~~~~g~---------t~L~~A~~~~~-~~~~~~Ll~~g~~~~~---~~~~g~t 115 (169)
T 2y1l_E 67 LKNGADVNA------------------VDHAGM---------TPLRLAALFGH-LEIVEVLLKNGADVNA---NDMEGHT 115 (169)
T ss_dssp HHTTCCTTC------------------CCTTSC---------CHHHHHHHTTC-HHHHHHHHHTTCCTTC---CCTTSCC
T ss_pred HHcCCCCCc------------------cCCCCC---------CHHHHHHHcCC-HHHHHHHHHcCCCCCC---CCCCCCC
Confidence 999988887 677775 77778888888 9999999999999888 8889999
Q ss_pred HHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcC
Q 039483 182 ALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKID 246 (360)
Q Consensus 182 ~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g 246 (360)
|||+|+..++. +++++|++.+ .+++.+|..|.||||+|+..|+.+++++|++.|
T Consensus 116 ~L~~A~~~~~~----------~~v~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 116 PLHLAAMFGHL----------EIVEVLLKNG-ADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp HHHHHHHTTCH----------HHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred HHHHHHHcCCH----------HHHHHHHHcC-CCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 99999999999 9999999988 778888999999999999999999999998875
|
| >3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A | Back alignment and structure |
|---|
Probab=99.96 E-value=6.4e-28 Score=201.13 Aligned_cols=159 Identities=14% Similarity=0.061 Sum_probs=136.3
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHh
Q 039483 25 IDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIER 104 (360)
Q Consensus 25 ~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~ 104 (360)
+.+|||.||..|+.+.++.|++. +..+ +.+|..|.|| ||+|+..|+.+++++|+++
T Consensus 3 ~~t~L~~A~~~g~~~~v~~ll~~----------------------~~~~-~~~~~~g~t~-L~~A~~~~~~~~v~~Ll~~ 58 (167)
T 3v31_A 3 NSLSVHQLAAQGEMLYLATRIEQ----------------------ENVI-NHTDEEGFTP-LMWAAAHGQIAVVEFLLQN 58 (167)
T ss_dssp TCCCHHHHHHTTCHHHHHHHHHH----------------------SSCT-TCCCTTSCCH-HHHHHHTTCHHHHHHHHHT
T ss_pred CcchHHHHHHCCCHHHHHHHHHc----------------------CCCc-CCCCCCCCCH-HHHHHHCCCHHHHHHHHHc
Confidence 35779999999999999998874 5556 7788889999 9999999999999999999
Q ss_pred ccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHH
Q 039483 105 AKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALH 184 (360)
Q Consensus 105 g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh 184 (360)
|++++. .|..|. ||||+|+..|+ .+++++|+++|++++. +|..|.||||
T Consensus 59 g~~~~~------------------~~~~g~---------t~L~~A~~~~~-~~~v~~Ll~~g~~~~~---~~~~g~t~L~ 107 (167)
T 3v31_A 59 GADPQL------------------LGKGRE---------SALSLACSKGY-TDIVKMLLDCGVDVNE---YDWNGGTPLL 107 (167)
T ss_dssp TCCTTC------------------CCTTCC---------CHHHHHHHHTC-HHHHHHHHHHTCCTTC---CCTTSCCHHH
T ss_pred CCCCCC------------------cCCCCC---------cHHHHHHHcCC-HHHHHHHHHCCCCCCc---CCCCCCCHHH
Confidence 988877 677774 77777888888 9999999999988888 8888999999
Q ss_pred HHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCcc
Q 039483 185 AATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTA 249 (360)
Q Consensus 185 ~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~ 249 (360)
+|+..|+. +++++|++.+ .+++..|..|+||||+|+..|+.+++++|++++.++
T Consensus 108 ~A~~~~~~----------~~v~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~ 161 (167)
T 3v31_A 108 YAVHGNHV----------KCVKMLLESG-ADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKL 161 (167)
T ss_dssp HHHHTTCH----------HHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHcCCH----------HHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 99999999 9999999887 778888889999999999999999999998887665
|
| >2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-27 Score=203.88 Aligned_cols=160 Identities=16% Similarity=0.115 Sum_probs=148.0
Q ss_pred CCCCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHH
Q 039483 21 SQPQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSV 100 (360)
Q Consensus 21 ~~~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~ 100 (360)
....+.+|||.|+..|+.++++.|++. +.++ +.+|..|.|| ||+|+..|+.+++++
T Consensus 31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~----------------------~~~~-~~~~~~g~t~-L~~A~~~~~~~~v~~ 86 (192)
T 2rfm_A 31 RDSYNRTPLMVACMLGMENAIDKLVEN----------------------FDKL-EDKDIEGSTA-LIWAVKNNRLGIAEK 86 (192)
T ss_dssp CCTTCCCHHHHHHHHTCGGGHHHHHHH----------------------HCCT-TCCCTTSCCH-HHHHHHTTCHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHh----------------------cccc-ccccccCccH-HHHHHHcCCHHHHHH
Confidence 345678999999999999999999984 4556 7888999999 999999999999999
Q ss_pred HHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCC
Q 039483 101 LIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMER 180 (360)
Q Consensus 101 Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~ 180 (360)
|+++|++++. .|..|. ||||+|+..|+ .+++++|+++|++++. +|..|.
T Consensus 87 Ll~~g~~~~~------------------~~~~g~---------t~L~~A~~~~~-~~~v~~Ll~~g~~~~~---~~~~g~ 135 (192)
T 2rfm_A 87 LLSKGSNVNT------------------KDFSGK---------TPLMWSIIFGY-SEMSYFLLEHGANVND---RNLEGE 135 (192)
T ss_dssp HHHHTCCTTC------------------CCTTSC---------CHHHHHHHHTC-HHHHHHHHHTTCCSSC---CCTTCC
T ss_pred HHHCCCCCCC------------------CCCCCC---------cHHHHHHHcCC-HHHHHHHHHCCCCCCC---CCCCCC
Confidence 9999999888 778875 78888889999 9999999999999999 999999
Q ss_pred cHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcC
Q 039483 181 QALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKID 246 (360)
Q Consensus 181 t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g 246 (360)
||||+|+..|+. +++++|++.+ .+++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 136 t~L~~A~~~~~~----------~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 136 TPLIVASKYGRS----------EIVKKLLELG-ADISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp CHHHHHHHHTCH----------HHHHHHHHTT-CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred CHHHHHHHcCCH----------HHHHHHHHCC-CCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 999999999999 9999999998 889999999999999999999999999999765
|
| >3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A | Back alignment and structure |
|---|
Probab=99.95 E-value=9.3e-28 Score=200.16 Aligned_cols=157 Identities=18% Similarity=0.168 Sum_probs=133.0
Q ss_pred CCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHH
Q 039483 80 KGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTV 159 (360)
Q Consensus 80 ~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~ 159 (360)
.|.|| ||.|+..|+.+++++|++.|.+++. .|..|. ||||+|+..|+ .+++
T Consensus 2 ~~~t~-L~~A~~~g~~~~v~~ll~~~~~~~~------------------~~~~g~---------t~L~~A~~~~~-~~~v 52 (167)
T 3v31_A 2 ANSLS-VHQLAAQGEMLYLATRIEQENVINH------------------TDEEGF---------TPLMWAAAHGQ-IAVV 52 (167)
T ss_dssp TTCCC-HHHHHHTTCHHHHHHHHHHSSCTTC------------------CCTTSC---------CHHHHHHHTTC-HHHH
T ss_pred CCcch-HHHHHHCCCHHHHHHHHHcCCCcCC------------------CCCCCC---------CHHHHHHHCCC-HHHH
Confidence 57899 9999999999999999999988887 777775 77788888899 9999
Q ss_pred HHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHH
Q 039483 160 VAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLIL 239 (360)
Q Consensus 160 ~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v 239 (360)
++|+++|++++. ++..|.||||+|+..++. +++++|++.+ .+++..|..|+||||+|+..|+.+++
T Consensus 53 ~~Ll~~g~~~~~---~~~~g~t~L~~A~~~~~~----------~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v 118 (167)
T 3v31_A 53 EFLLQNGADPQL---LGKGRESALSLACSKGYT----------DIVKMLLDCG-VDVNEYDWNGGTPLLYAVHGNHVKCV 118 (167)
T ss_dssp HHHHHTTCCTTC---CCTTCCCHHHHHHHHTCH----------HHHHHHHHHT-CCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHcCCCCCC---cCCCCCcHHHHHHHcCCH----------HHHHHHHHCC-CCCCcCCCCCCCHHHHHHHcCCHHHH
Confidence 999999999998 899999999999999999 9999999988 77889999999999999999999999
Q ss_pred HHHHhcCCccccccccCCCCchhhhhhcCCcccccccccccCccCCCCCCcHHHHHHHcCCHHHHHHHhhhh
Q 039483 240 KLILKIDRTAAKIADKDRKMTALHLVHGPKGCQNNMLASSLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGRV 311 (360)
Q Consensus 240 ~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~~~~L~~~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~~ 311 (360)
++|+++|+++ +.++. .|+||+|+|++.|+.++++.|.++.
T Consensus 119 ~~Ll~~g~~~-~~~~~-------------------------------~g~t~l~~A~~~~~~~~~~~L~~~~ 158 (167)
T 3v31_A 119 KMLLESGADP-TIETD-------------------------------SGYNSMDLAVALGYRSVQQVIESHL 158 (167)
T ss_dssp HHHHHTTCCT-TCCCT-------------------------------TSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHcCCCC-CCcCC-------------------------------CCCCHHHHHHHcCcHHHHHHHHHHH
Confidence 9999999887 55554 4556666666666666666666553
|
| >2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-27 Score=199.69 Aligned_cols=151 Identities=22% Similarity=0.189 Sum_probs=126.4
Q ss_pred CCCCCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcH
Q 039483 77 VTAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSS 156 (360)
Q Consensus 77 ~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~ 156 (360)
....+.|| ||.||+.|+.+++++|+++|++++. .|..|. ||||+|+..|+ .
T Consensus 10 ~~~~~~~~-l~~A~~~g~~~~v~~Ll~~g~~~~~------------------~~~~g~---------t~L~~A~~~~~-~ 60 (169)
T 2y1l_E 10 HGSDLGKK-LLEAARAGRDDEVRILMANGADVNA------------------EDASGW---------TPLHLAAFNGH-L 60 (169)
T ss_dssp ---CHHHH-HHHHHHHTCHHHHHHHHHTTCCTTC------------------CCTTSC---------CHHHHHHHTTC-H
T ss_pred CCCcccch-HHHHHHcCCHHHHHHHHHCCCCCCC------------------CCCCCC---------CHHHHHHHcCC-H
Confidence 34556788 9999999999999999999998887 777775 77788888999 9
Q ss_pred HHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCH
Q 039483 157 HTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNY 236 (360)
Q Consensus 157 ~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~ 236 (360)
+++++|+++|++++. ++..|.||||+|+..|+. +++++|++.+ .+++..|..|+||||+|+..|+.
T Consensus 61 ~~v~~Ll~~g~~~~~---~~~~g~t~L~~A~~~~~~----------~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~ 126 (169)
T 2y1l_E 61 EIVEVLLKNGADVNA---VDHAGMTPLRLAALFGHL----------EIVEVLLKNG-ADVNANDMEGHTPLHLAAMFGHL 126 (169)
T ss_dssp HHHHHHHHTTCCTTC---CCTTSCCHHHHHHHTTCH----------HHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHHHHcCCCCCc---cCCCCCCHHHHHHHcCCH----------HHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCH
Confidence 999999999999998 899999999999999999 9999999998 77889999999999999999999
Q ss_pred HHHHHHHhcCCccccccccCCCCchhhhhhcCCccc
Q 039483 237 LILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ 272 (360)
Q Consensus 237 ~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~ 272 (360)
+++++|+++|+++ +.+|. .|.||||+|+..++.+
T Consensus 127 ~~v~~Ll~~g~~~-~~~~~-~g~t~l~~A~~~~~~~ 160 (169)
T 2y1l_E 127 EIVEVLLKNGADV-NAQDK-FGKTAFDISIDNGNED 160 (169)
T ss_dssp HHHHHHHHTTCCT-TCCCT-TSCCHHHHHHHTTCHH
T ss_pred HHHHHHHHcCCCC-CCcCC-CCCCHHHHHHHhCCHH
Confidence 9999999999888 66665 5555555554444443
|
| >3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-27 Score=200.52 Aligned_cols=165 Identities=16% Similarity=0.156 Sum_probs=138.0
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHh
Q 039483 25 IDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIER 104 (360)
Q Consensus 25 ~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~ 104 (360)
..++||.|+..|+.+.++.|++.. +.++ +.+|..|.|| ||+|+..|+.+++++|+++
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~~---------------------~~~~-~~~~~~g~t~-L~~A~~~~~~~~v~~Ll~~ 61 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDNT---------------------ENDL-NQGDDHGFSP-LHWACREGRSAVVEMLIMR 61 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHCT---------------------TSCT-TCCCTTSCCH-HHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHhcC---------------------cccc-cccCCCCCCH-HHHHHHcCcHHHHHHHHHc
Confidence 445689999999999999888721 4556 7788888999 9999999999999999999
Q ss_pred ccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHH
Q 039483 105 AKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALH 184 (360)
Q Consensus 105 g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh 184 (360)
|++++. .|..|. ||||+|+..|+ .+++++|+++|++++. +|..|.||||
T Consensus 62 g~~~~~------------------~~~~g~---------t~L~~A~~~~~-~~~v~~Ll~~g~~~~~---~d~~g~t~L~ 110 (179)
T 3f6q_A 62 GARINV------------------MNRGDD---------TPLHLAASHGH-RDIVQKLLQYKADINA---VNEHGNVPLH 110 (179)
T ss_dssp TCCTTC------------------CCTTCC---------CHHHHHHHTTC-HHHHHHHHHTTCCTTC---CCTTSCCHHH
T ss_pred CCCCCC------------------cCCCCC---------CHHHHHHHcCC-HHHHHHHHHcCCCCCc---cCCCCCCHHH
Confidence 988887 677775 77777788888 9999999999988888 8888999999
Q ss_pred HHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCcccccccc
Q 039483 185 AATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADK 255 (360)
Q Consensus 185 ~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~ 255 (360)
+|+..++. +++++|++.+ .+++.+|..|.||||+|+..++.+++++|++.|+++ +..+.
T Consensus 111 ~A~~~~~~----------~~v~~Ll~~g-a~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~-~~~~~ 169 (179)
T 3f6q_A 111 YACFWGQD----------QVAEDLVANG-ALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNL-NRIPY 169 (179)
T ss_dssp HHHHTTCH----------HHHHHHHHTT-CCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCC-SCBCC
T ss_pred HHHHcCCH----------HHHHHHHHCC-CCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCc-ccCCc
Confidence 99999998 9999999888 778888889999999999888889999999998888 55544
|
| >1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-26 Score=190.79 Aligned_cols=153 Identities=16% Similarity=0.132 Sum_probs=140.0
Q ss_pred CHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHhc
Q 039483 26 DPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIERA 105 (360)
Q Consensus 26 ~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g 105 (360)
.++||.||..|+.+.++.|++. . +.++ +.+|..|.|| ||+ +..|+.+++++|+++|
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~---~------------------~~~~-~~~~~~g~t~-L~~-~~~~~~~~v~~Ll~~g 58 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLHR---E------------------LVHP-DALNRFGKTA-LQV-MMFGSTAIALELLKQG 58 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHT---T------------------CCCT-TCCCTTSCCH-HHH-SCTTCHHHHHHHHHTT
T ss_pred chHHHHHHHhCCHHHHHHHHHh---h------------------CcCc-cccCCCCCcH-HHH-HHcCCHHHHHHHHHCC
Confidence 4789999999999999999983 1 4466 8889999999 999 9999999999999999
Q ss_pred cccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHH
Q 039483 106 KLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHA 185 (360)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~ 185 (360)
++++. +|..|. ||||+|+..|+ .+++++|+++|++++. +|..|.||||+
T Consensus 59 ~~~~~------------------~~~~g~---------t~L~~A~~~~~-~~~v~~Ll~~g~~~~~---~~~~g~t~L~~ 107 (156)
T 1bd8_A 59 ASPNV------------------QDTSGT---------SPVHDAARTGF-LDTLKVLVEHGADVNV---PDGTGALPIHL 107 (156)
T ss_dssp CCTTC------------------CCTTSC---------CHHHHHHHTTC-HHHHHHHHHTTCCSCC---CCTTSCCHHHH
T ss_pred CCCCC------------------cCCCCC---------CHHHHHHHcCc-HHHHHHHHHcCCCCCC---cCCCCCcHHHH
Confidence 99988 778875 78888888999 9999999999999999 99999999999
Q ss_pred HHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhc
Q 039483 186 ATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKI 245 (360)
Q Consensus 186 A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ 245 (360)
|+..|+. +++++|++. .+++..|..|.||||+|+..|+.+++++|+++
T Consensus 108 A~~~~~~----------~~v~~Ll~~--~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 108 AVQEGHT----------AVVSFLAAE--SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHTCH----------HHHHHHHTT--SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred HHHhChH----------HHHHHHHhc--cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 9999999 999999988 77889999999999999999999999999864
|
| >3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-27 Score=198.08 Aligned_cols=160 Identities=19% Similarity=0.214 Sum_probs=125.4
Q ss_pred CCCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHH
Q 039483 22 QPQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVL 101 (360)
Q Consensus 22 ~~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~L 101 (360)
.+.+.++||.|++.|+.+.++.|++.. +..+ +..+..|.|| ||+|+..|+.+++++|
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~---------------------~~~~-~~~~~~g~t~-L~~A~~~~~~~~v~~L 61 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQ---------------------SVNC-RDIEGRQSTP-LHFAAGYNRVSVVEYL 61 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTT---------------------TTTC-CCTTTTCCCH-HHHHHHTTCHHHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcC---------------------CCCc-cccccCCCCH-HHHHHHcChHHHHHHH
Confidence 344567888888888888888887621 3444 6677778888 8888888888888888
Q ss_pred HHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCc
Q 039483 102 IERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQ 181 (360)
Q Consensus 102 l~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t 181 (360)
+++|++++. .|..|. ||||+|+..|+ .+++++|+++|++++. +|..|.|
T Consensus 62 l~~g~~~~~------------------~~~~g~---------t~L~~A~~~~~-~~~v~~Ll~~g~~~~~---~~~~g~t 110 (165)
T 3twr_A 62 LQHGADVHA------------------KDKGGL---------VPLHNACSYGH-YEVAELLVKHGAVVNV---ADLWKFT 110 (165)
T ss_dssp HHTTCCTTC------------------CCTTSC---------CHHHHHHHTTC-HHHHHHHHHTTCCTTC---CCTTCCC
T ss_pred HhcCCCCCc------------------cCCCCC---------CHHHHHHHcCc-HHHHHHHHhCCCCCCC---cCCCCCC
Confidence 888888777 667764 67777777888 8888888888888888 8888888
Q ss_pred HHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCC
Q 039483 182 ALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDR 247 (360)
Q Consensus 182 ~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~ 247 (360)
|||+|+..|+. +++++|++++ .+++.+|..|+||||+|+. ++.+++++|+++|+
T Consensus 111 ~L~~A~~~~~~----------~~v~~Ll~~g-a~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 111 PLHEAAAKGKY----------EICKLLLQHG-ADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp HHHHHHHTTCH----------HHHHHHHHTT-CCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred HHHHHHHcCCH----------HHHHHHHHcC-CCCcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 88888888888 8888888887 7788888888888888666 78888888887774
|
| >1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-26 Score=190.00 Aligned_cols=149 Identities=22% Similarity=0.242 Sum_probs=109.6
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHhcc
Q 039483 27 PNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIERAK 106 (360)
Q Consensus 27 ~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~ 106 (360)
++||.|+..|+.+.++.|++. +..+ + .+..|.|| ||+|+..|+.+++++|++.|+
T Consensus 4 ~~L~~A~~~g~~~~v~~Ll~~----------------------g~~~-~-~~~~g~t~-L~~A~~~~~~~~v~~Ll~~g~ 58 (153)
T 1awc_B 4 KKLLEAARAGQDDEVRILMAN----------------------GAPF-T-TDWLGTSP-LHLAAQYGHFSTTEVLLRAGV 58 (153)
T ss_dssp HHHHHHHHHTCHHHHHHHHHH----------------------TCCC-C-CCTTCCCH-HHHHHHHTCHHHHHHHHTTTC
T ss_pred HHHHHHHHcCCHHHHHHHHHc----------------------CCCC-C-cCCCCCCH-HHHHHHcCCHHHHHHHHHcCC
Confidence 567777777777777777763 2222 2 46667777 777777777777777777777
Q ss_pred ccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHH
Q 039483 107 LVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAA 186 (360)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A 186 (360)
+++. +|..|. ||||+|+..|+ .+++++|+++|++++. +|..|.||||+|
T Consensus 59 ~~~~------------------~~~~g~---------t~L~~A~~~~~-~~~v~~Ll~~g~~~~~---~~~~g~t~L~~A 107 (153)
T 1awc_B 59 SRDA------------------RTKVDR---------TPLHMAASEGH-ANIVEVLLKHGADVNA---KDMLKMTALHWA 107 (153)
T ss_dssp CTTC------------------CCTTCC---------CHHHHHHHHTC-HHHHHHHHTTTCCTTC---CCTTSCCHHHHH
T ss_pred CCCC------------------CCCCCC---------CHHHHHHHcCh-HHHHHHHHHcCCCCCC---CCCCCCCHHHHH
Confidence 7766 566664 66666677777 7777777777777777 777777777777
Q ss_pred HhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHH
Q 039483 187 TMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLI 242 (360)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~L 242 (360)
+..|+. +++++|++.+ .+++.+|..|.||||+|+..|+.+++++|
T Consensus 108 ~~~~~~----------~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 108 TEHNHQ----------EVVELLIKYG-ADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHTTCH----------HHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHcCCH----------HHHHHHHHcC-CCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 777777 7777777776 66777777777777777777777777765
|
| >2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-28 Score=217.03 Aligned_cols=184 Identities=14% Similarity=0.025 Sum_probs=162.8
Q ss_pred CCCCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHH
Q 039483 21 SQPQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSV 100 (360)
Q Consensus 21 ~~~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~ 100 (360)
......++||.||..|+.++++.|++. +.++ +.+|..|.|| ||+||..|+.+++++
T Consensus 17 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~----------------------g~~~-~~~d~~g~tp-Lh~A~~~g~~~~v~~ 72 (229)
T 2vge_A 17 ARLNPLVLLLDAALTGELEVVQQAVKE----------------------MNDP-SQPNEEGITA-LHNAICGANYSIVDF 72 (229)
T ss_dssp TTSCHHHHHHHHHHHTCHHHHHHHHHH----------------------SSCT-TCCCTTSCCH-HHHHHHTTCHHHHHH
T ss_pred cccchhHHHHHHHHcCCHHHHHHHHhc----------------------CCCC-CCCCCCCCCH-HHHHHHcCCHHHHHH
Confidence 344566899999999999999999984 6677 8899999999 999999999999999
Q ss_pred HHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCC-CCC
Q 039483 101 LIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKA-PME 179 (360)
Q Consensus 101 Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d-~~g 179 (360)
|++.|++++. +|..|. ||||+|+..|+ .+++++|++.|++++. ++ ..|
T Consensus 73 Ll~~ga~~n~------------------~d~~g~---------tpLh~A~~~g~-~~~v~~Ll~~ga~~~~---~~~~~g 121 (229)
T 2vge_A 73 LITAGANVNS------------------PDSHGW---------TPLHCAASCND-TVICMALVQHGAAIFA---TTLSDG 121 (229)
T ss_dssp HHHTTCCTTC------------------CCTTCC---------CHHHHHHHTTC-HHHHHHHHTTTCCTTC---CCSSTT
T ss_pred HHHCCCCCCC------------------CCCCCC---------CHHHHHHHcCC-HHHHHHHHHcCCCccc---ccCCCC
Confidence 9999999998 788885 88888899999 9999999999999998 76 599
Q ss_pred CcHHHHH--HhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCc--ccccccc
Q 039483 180 RQALHAA--TMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRT--AAKIADK 255 (360)
Q Consensus 180 ~t~Lh~A--~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~--~~~~~d~ 255 (360)
.||||+| +..|+. +++++|++.+ .+++..|..|.||++.++..+. .++|++.|++ + +.+|.
T Consensus 122 ~tpL~~A~a~~~~~~----------~~v~~Ll~~g-a~~~~~~~~~~~~l~~~~~~~~---~~~ll~~ga~~~~-~~~d~ 186 (229)
T 2vge_A 122 ATAFEKCDPYREGYA----------DCATYLADVE-QSMGLMNSGAVYALWDYSAEFG---DELSFREGESVTV-LRRDG 186 (229)
T ss_dssp CCTGGGCCTTSTTHH----------HHHHHHHHHH-HHTTTSGGGEEEESSCBCCSST---TBCCBCTTCEEEE-EESSC
T ss_pred CCHHHHHHHHhcChH----------HHHHHHHHcC-CCcccccCCchHHHHHHhhccc---cccCccccccccc-cccCC
Confidence 9999999 999999 9999999999 7899999999999997655543 3677888988 5 77888
Q ss_pred CCCCchhhhhhcCCccc-ccc
Q 039483 256 DRKMTALHLVHGPKGCQ-NNM 275 (360)
Q Consensus 256 ~~g~tpLh~A~~~~~~~-~~~ 275 (360)
.|+||||+|+..++.+ ++.
T Consensus 187 -~G~TpL~~A~~~g~~~~v~~ 206 (229)
T 2vge_A 187 -PEETDWWWAALHGQEGYVPR 206 (229)
T ss_dssp -TTCSSEEEEEETTEEEEEEG
T ss_pred -CcccHHHHHHHcCCcceeeh
Confidence 9999999999999988 443
|
| >1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.95 E-value=3.8e-27 Score=193.71 Aligned_cols=145 Identities=21% Similarity=0.244 Sum_probs=121.0
Q ss_pred CChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHH
Q 039483 82 DTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVA 161 (360)
Q Consensus 82 ~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~ 161 (360)
.|| ||.|+..|+.+++++|+++|++++ .|..|. ||||+|+..|+ .+++++
T Consensus 3 ~~~-L~~A~~~g~~~~v~~Ll~~g~~~~-------------------~~~~g~---------t~L~~A~~~~~-~~~v~~ 52 (153)
T 1awc_B 3 GKK-LLEAARAGQDDEVRILMANGAPFT-------------------TDWLGT---------SPLHLAAQYGH-FSTTEV 52 (153)
T ss_dssp HHH-HHHHHHHTCHHHHHHHHHHTCCCC-------------------CCTTCC---------CHHHHHHHHTC-HHHHHH
T ss_pred cHH-HHHHHHcCCHHHHHHHHHcCCCCC-------------------cCCCCC---------CHHHHHHHcCC-HHHHHH
Confidence 478 999999999999999999988654 355564 78888888899 999999
Q ss_pred HHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHH
Q 039483 162 ILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKL 241 (360)
Q Consensus 162 Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~ 241 (360)
|++.|++++. ++..|.||||+|+..|+. +++++|++.+ .+++.+|..|+||||+|+..|+.+++++
T Consensus 53 Ll~~g~~~~~---~~~~g~t~L~~A~~~~~~----------~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 118 (153)
T 1awc_B 53 LLRAGVSRDA---RTKVDRTPLHMAASEGHA----------NIVEVLLKHG-ADVNAKDMLKMTALHWATEHNHQEVVEL 118 (153)
T ss_dssp HHTTTCCTTC---CCTTCCCHHHHHHHHTCH----------HHHHHHHTTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HHHcCCCCCC---CCCCCCCHHHHHHHcChH----------HHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHH
Confidence 9999999988 888999999999999999 9999999988 7788889999999999999999999999
Q ss_pred HHhcCCccccccccCCCCchhhhhhcCCccc
Q 039483 242 ILKIDRTAAKIADKDRKMTALHLVHGPKGCQ 272 (360)
Q Consensus 242 Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~ 272 (360)
|+++|+++ +.++. .|.||||+|+..++.+
T Consensus 119 Ll~~ga~~-~~~~~-~g~t~l~~A~~~~~~~ 147 (153)
T 1awc_B 119 LIKYGADV-HTQSK-FCKTAFDISIDNGNED 147 (153)
T ss_dssp HHHTTCCT-TCCCT-TSCCHHHHHHHTTCHH
T ss_pred HHHcCCCc-cccCC-CCCCHHHHHHHcCCHH
Confidence 99999888 66666 5555555555554444
|
| >1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2.2e-27 Score=196.65 Aligned_cols=155 Identities=16% Similarity=0.109 Sum_probs=117.5
Q ss_pred CCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHH
Q 039483 81 GDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVV 160 (360)
Q Consensus 81 g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~ 160 (360)
..|| ||.|+..|+.+++++|+++|++++. .|..|. ||||+|+. |+ .++++
T Consensus 5 ~~~~-L~~A~~~g~~~~v~~Ll~~~~~~~~------------------~~~~g~---------t~L~~A~~-~~-~~~v~ 54 (162)
T 1ihb_A 5 WGNE-LASAAARGDLEQLTSLLQNNVNVNA------------------QNGFGR---------TALQVMKL-GN-PEIAR 54 (162)
T ss_dssp CHHH-HHHHHHHTCHHHHHHHTTSCCCTTC------------------CCTTSC---------CHHHHCCS-SC-HHHHH
T ss_pred HhhH-HHHHHHcCCHHHHHHHHhCCCCccc------------------cCccCc---------cHHHHHHc-Cc-HHHHH
Confidence 4577 8888888888888888888887776 666765 56666666 77 88888
Q ss_pred HHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHH
Q 039483 161 AILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILK 240 (360)
Q Consensus 161 ~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~ 240 (360)
+|+++|++++. ++..|.||||+|+..|+. +++++|++.+ .+++.+|..|+||||+|+..|+.++++
T Consensus 55 ~Ll~~g~~~~~---~~~~g~t~L~~A~~~~~~----------~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~ 120 (162)
T 1ihb_A 55 RLLLRGANPDL---KDRTGFAVIHDAARAGFL----------DTLQTLLEFQ-ADVNIEDNEGNLPLHLAAKEGHLRVVE 120 (162)
T ss_dssp HHHHTTCCTTC---CCTTSCCHHHHHHHHTCH----------HHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHcCCCCCC---CCCCCCCHHHHHHHcCCH----------HHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHH
Confidence 88888888887 888888888888888888 8888888887 777888888888888888888888888
Q ss_pred HHHhcCCccccccccCCCCchhhhhhcCCcccccccccccCccCCCCCCcHHHHHHHcCCHHHHHHHhhh
Q 039483 241 LILKIDRTAAKIADKDRKMTALHLVHGPKGCQNNMLASSLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGR 310 (360)
Q Consensus 241 ~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~~~~L~~~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~ 310 (360)
+|+++|++..+.+ |..|+||||+|++.|+.++++.|+++
T Consensus 121 ~Ll~~g~~~~~~~-------------------------------~~~g~t~l~~A~~~~~~~~~~~Ll~~ 159 (162)
T 1ihb_A 121 FLVKHTASNVGHR-------------------------------NHKGDTACDLARLYGRNEVVSLMQAN 159 (162)
T ss_dssp HHHHHSCCCTTCC-------------------------------CTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHccCCCCCCc-------------------------------CCCCCcHHHHHHHcCCHHHHHHHHHh
Confidence 8888887632444 44556666666666666666665543
|
| >3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A | Back alignment and structure |
|---|
Probab=99.94 E-value=8.4e-27 Score=196.79 Aligned_cols=164 Identities=14% Similarity=0.125 Sum_probs=143.9
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHHh-ccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHH
Q 039483 79 AKGDTRSRHVAAKFDHCDIVSVLIER-AKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSH 157 (360)
Q Consensus 79 ~~g~tp~Lh~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~ 157 (360)
.++.+| ||.||..|+.+++++|++. +.+++. .|..|. ||||+|+..|+ .+
T Consensus 3 ~~~~~~-l~~A~~~g~~~~v~~ll~~~~~~~~~------------------~~~~g~---------t~L~~A~~~~~-~~ 53 (179)
T 3f6q_A 3 PEFMDD-IFTQCREGNAVAVRLWLDNTENDLNQ------------------GDDHGF---------SPLHWACREGR-SA 53 (179)
T ss_dssp ----CC-HHHHHHHTCHHHHHHHHHCTTSCTTC------------------CCTTSC---------CHHHHHHHTTC-HH
T ss_pred HHHHHH-HHHHHHcCCHHHHHHHHhcCcccccc------------------cCCCCC---------CHHHHHHHcCc-HH
Confidence 356799 9999999999999999998 455666 777875 88888899999 99
Q ss_pred HHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHH
Q 039483 158 TVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYL 237 (360)
Q Consensus 158 ~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~ 237 (360)
++++|++.|++++. ++..|.||||+|+..|+. +++++|++.+ .+++..|..|+||||+|+..|+.+
T Consensus 54 ~v~~Ll~~g~~~~~---~~~~g~t~L~~A~~~~~~----------~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~~~~~~~ 119 (179)
T 3f6q_A 54 VVEMLIMRGARINV---MNRGDDTPLHLAASHGHR----------DIVQKLLQYK-ADINAVNEHGNVPLHYACFWGQDQ 119 (179)
T ss_dssp HHHHHHHTTCCTTC---CCTTCCCHHHHHHHTTCH----------HHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHcCCCCCC---cCCCCCCHHHHHHHcCCH----------HHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHH
Confidence 99999999999999 999999999999999999 9999999998 889999999999999999999999
Q ss_pred HHHHHHhcCCccccccccCCCCchhhhhhcCCccc-cccccc--ccCccCCCC
Q 039483 238 ILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLAS--SLMDEGDAK 287 (360)
Q Consensus 238 ~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~~--~~~~~~d~~ 287 (360)
++++|+++|+++ +.+|. .|.||||+|+..++.+ +++|++ ++++..+..
T Consensus 120 ~v~~Ll~~ga~~-~~~~~-~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~~~~~ 170 (179)
T 3f6q_A 120 VAEDLVANGALV-SICNK-YGEMPVDKAKAPLRELLRERAEKMGQNLNRIPYK 170 (179)
T ss_dssp HHHHHHHTTCCS-SBCCT-TSCCGGGGSCHHHHHHHHHHHHHTTCCCSCBCCC
T ss_pred HHHHHHHCCCCc-chhcc-CCCCcHHHHHHHHHHHHHHHHHHhhcCcccCCcc
Confidence 999999999999 99999 9999999998877777 777764 666555443
|
| >2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.7e-26 Score=205.91 Aligned_cols=187 Identities=16% Similarity=0.075 Sum_probs=148.1
Q ss_pred CCCCCCHHHHHHHHc---CChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHH
Q 039483 21 SQPQIDPNLFKVAAA---GNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDI 97 (360)
Q Consensus 21 ~~~~~~~~L~~Aa~~---G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~ 97 (360)
....+.+|||.|+.. |+.++++.|++.+.+...... +. .... ...|..|.|| ||+|+..|+.++
T Consensus 39 ~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~--------~~---~~~~-~~~d~~g~t~-L~~A~~~g~~~~ 105 (256)
T 2etb_A 39 EGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKP--------LV---NAQC-TDEFYQGHSA-LHIAIEKRSLQC 105 (256)
T ss_dssp BTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSC--------GG---GCCC-CSTTTTTCCH-HHHHHHTTCHHH
T ss_pred CCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhh--------hc---cccc-ccccccCCCH-HHHHHHcCCHHH
Confidence 356678999999999 999999999995443310000 00 1112 3456789999 999999999999
Q ss_pred HHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHh---hCCCCCcccc
Q 039483 98 VSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILK---SCTSVSHIYM 174 (360)
Q Consensus 98 v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~---~g~~~~~~~~ 174 (360)
+++|+++|++++..|.....+. ..+..|..|. ||||+|+..|+ .+++++|++ +|++++.
T Consensus 106 v~~Ll~~ga~~~~~~~~~~~~~-----~~~~~~~~g~---------tpL~~A~~~~~-~~~v~~Ll~~~~~ga~~n~--- 167 (256)
T 2etb_A 106 VKLLVENGADVHLRACGRFFQK-----HQGTCFYFGE---------LPLSLAACTKQ-WDVVTYLLENPHQPASLEA--- 167 (256)
T ss_dssp HHHHHHTTCCTTCCCCSGGGSC-----CSSSCCCSCS---------SHHHHHHHTTC-HHHHHHHHHCSSCCCCTTC---
T ss_pred HHHHHHcCCCCCcccccccccc-----cccccccCCC---------CHHHHHHHcCC-HHHHHHHHhccccCCCcCc---
Confidence 9999999999988432221110 0000112264 88888899999 999999999 9999999
Q ss_pred CCCCCCcHHHHHHh--cCCcccccccCChHH-------HHHHHHhcCcccc-------ccccCCCChHHHHHHHcCCHHH
Q 039483 175 KAPMERQALHAATM--HIDLCKFNHTLSNDC-------AVQQLFEGKKSMI-------KGIDQCWWTPIHYAAYHRNYLI 238 (360)
Q Consensus 175 ~d~~g~t~Lh~A~~--~~~~~~~~~~~~~~~-------~~~~Ll~~~~~~i-------~~~d~~g~t~Lh~A~~~~~~~~ 238 (360)
+|..|+||||+|+. .++. + ++++|++.+ +++ +.+|..|+||||+|+..|+.++
T Consensus 168 ~d~~g~TpLh~A~~~~~~~~----------~~~~~~~~iv~~Ll~~g-a~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~ 236 (256)
T 2etb_A 168 TDSLGNTVLHALVMIADNSP----------ENSALVIHMYDGLLQMG-ARLCPTVQLEEISNHQGLTPLKLAAKEGKIEI 236 (256)
T ss_dssp CCTTSCCHHHHHHHHCCSCH----------HHHHHHHHHHHHHHHHH-HHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHH
T ss_pred cCCCCCCHHHHHHHcccCCc----------hhhHHHHHHHHHHHHcC-CCcccccccccccCCCCCCHHHHHHHhCCHHH
Confidence 99999999999999 6777 7 999999998 778 8899999999999999999999
Q ss_pred HHHHHhcCCcc
Q 039483 239 LKLILKIDRTA 249 (360)
Q Consensus 239 v~~Ll~~g~~~ 249 (360)
+++|+++|.+.
T Consensus 237 v~~Ll~~g~~~ 247 (256)
T 2etb_A 237 FRHILQREFSG 247 (256)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHhCCCCC
Confidence 99999998765
|
| >1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-27 Score=211.96 Aligned_cols=177 Identities=17% Similarity=0.046 Sum_probs=127.7
Q ss_pred CCCCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHH
Q 039483 78 TAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSH 157 (360)
Q Consensus 78 ~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~ 157 (360)
+..|.|| ||.|++.|+.+.++.|+++|++++. . ..| .||||.|+..|+ .+
T Consensus 2 ~~~g~t~-L~~a~~~~~~~~~~~ll~~g~~~~~------------------~-~~~---------~t~L~~A~~~g~-~~ 51 (239)
T 1ycs_B 2 EITGQVS-LPPGKRTNLRKTGSERIAHGMRVKF------------------N-PLP---------LALLLDSSLEGE-FD 51 (239)
T ss_dssp -------------------------------------------------------C---------HHHHHHHHHHTC-HH
T ss_pred Ccccccc-CchhhhhhhHHHHHHHhccCCCccc------------------C-chh---------hHHHHHHHHcCC-HH
Confidence 4569999 9999999999999999999998875 2 333 488999999999 99
Q ss_pred HHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHH
Q 039483 158 TVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYL 237 (360)
Q Consensus 158 ~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~ 237 (360)
++++|++.|++++. +|..|.||||+|+..|+. +++++|++++ .+++.+|..|+||||+|+..|+.+
T Consensus 52 ~v~~Ll~~g~~~~~---~d~~g~t~L~~A~~~g~~----------~~v~~Ll~~g-a~~~~~d~~g~tpL~~A~~~~~~~ 117 (239)
T 1ycs_B 52 LVQRIIYEVDDPSL---PNDEGITALHNAVCAGHT----------EIVKFLVQFG-VNVNAADSDGWTPLHCAASCNNVQ 117 (239)
T ss_dssp HHHHHTSTTSSCCC---CCTTSCCHHHHHHHHTCH----------HHHHHHHHHT-CCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred HHHHHHHcCCCCCC---cCCCCCCHHHHHHHcCCH----------HHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHH
Confidence 99999999999999 999999999999999999 9999999998 889999999999999999999999
Q ss_pred HHHHHHhcCCccccccccCCCC-chhhhh--hcCCccc-cccccc--ccCccC---------CCCCCcHHHHHHHcCC
Q 039483 238 ILKLILKIDRTAAKIADKDRKM-TALHLV--HGPKGCQ-NNMLAS--SLMDEG---------DAKGNTTVHFFAAVHR 300 (360)
Q Consensus 238 ~v~~Ll~~g~~~~~~~d~~~g~-tpLh~A--~~~~~~~-~~~L~~--~~~~~~---------d~~g~Tpl~~A~~~~~ 300 (360)
++++|+++|+++ +.++. .|. ||||+| +..++.+ +++|+. ++++.. +..|.++++++.+.|.
T Consensus 118 ~v~~Ll~~ga~~-~~~~~-~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 118 VCKFLVESGAAV-FAMTY-SDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp HHHHHHHTTCCT-TCCCS-SSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred HHHHHHHcCCCc-ceecC-CCCcchHHHHHHhhhccHHHHHHHHHhhhcccccccceEEEEeccCCCCCCcccccCCC
Confidence 999999999999 99988 666 999999 6677777 888874 555544 6678999998888775
|
| >3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.6e-26 Score=206.50 Aligned_cols=186 Identities=16% Similarity=0.079 Sum_probs=147.1
Q ss_pred CCCCHHHHHHH---HcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHH
Q 039483 23 PQIDPNLFKVA---AAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVS 99 (360)
Q Consensus 23 ~~~~~~L~~Aa---~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~ 99 (360)
..+.+|||.|+ ..|+.++++.|++...+..... . +. ...+ ...|..|.|| ||+||..|+.++|+
T Consensus 44 ~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~-----~---~~---~~~~-~~~d~~g~t~-L~~A~~~g~~~~v~ 110 (260)
T 3jxi_A 44 STGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMR-----E---FI---NSPF-RDVYYRGQTA-LHIAIERRCKHYVE 110 (260)
T ss_dssp TTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHH-----H---HH---TCCB-CCSSEESBCH-HHHHHHTTCHHHHH
T ss_pred CCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchH-----h---hh---cccc-cccccCCCCH-HHHHHHcCCHHHHH
Confidence 56889999999 7799999999999543321000 0 00 2334 5566789999 99999999999999
Q ss_pred HHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHh---hCCCCCccccCC
Q 039483 100 VLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILK---SCTSVSHIYMKA 176 (360)
Q Consensus 100 ~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~---~g~~~~~~~~~d 176 (360)
+|+++|++++..+...... .......+..|. ||||+|+..|+ .+++++|++ .|++++. +|
T Consensus 111 ~Ll~~ga~~~~~~~~~~~~----~~~~~~~~~~g~---------tpL~~A~~~g~-~~~v~~Ll~~~~~ga~~~~---~d 173 (260)
T 3jxi_A 111 LLVEKGADVHAQARGRFFQ----PKDEGGYFYFGE---------LPLSLAACTNQ-PHIVHYLTENGHKQADLRR---QD 173 (260)
T ss_dssp HHHHTTCCTTCCCEECCCS----SSCCCCSCCSCS---------SHHHHHHHTTC-HHHHHHHHHCSSCCCCTTC---CC
T ss_pred HHHhCCCCcCccccccccC----cccccccccCCC---------CHHHHHHHcCC-HHHHHHHHhccccCCCCcc---cC
Confidence 9999999999843211000 000000114564 88888999999 999999999 9999999 99
Q ss_pred CCCCcHHHHHHhcCC---------cccccccCChHHHHHHHHhcCcccc-------ccccCCCChHHHHHHHcCCHHHHH
Q 039483 177 PMERQALHAATMHID---------LCKFNHTLSNDCAVQQLFEGKKSMI-------KGIDQCWWTPIHYAAYHRNYLILK 240 (360)
Q Consensus 177 ~~g~t~Lh~A~~~~~---------~~~~~~~~~~~~~~~~Ll~~~~~~i-------~~~d~~g~t~Lh~A~~~~~~~~v~ 240 (360)
..|+||||+|+..++ . +++++|++.+ +++ +..|..|+||||+|+..|+.++++
T Consensus 174 ~~g~TpLh~A~~~~~~~~~~~~~~~----------~~v~~Ll~~g-a~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~ 242 (260)
T 3jxi_A 174 SRGNTVLHALVAIADNTRENTKFVT----------KMYDLLLIKC-AKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQ 242 (260)
T ss_dssp TTSCCHHHHHHHHCCSSHHHHHHHH----------HHHHHHHHHH-HHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred CCCCcHHHHHHHhccCchhHHHHHH----------HHHHHHHHhC-cccccccchhhcccCCCCCHHHHHHHcCCHHHHH
Confidence 999999999998887 6 8999999998 767 679999999999999999999999
Q ss_pred HHHhcCCcc
Q 039483 241 LILKIDRTA 249 (360)
Q Consensus 241 ~Ll~~g~~~ 249 (360)
+|+++|++.
T Consensus 243 ~Ll~~g~~~ 251 (260)
T 3jxi_A 243 HIIRREIAD 251 (260)
T ss_dssp HHHHHHHHH
T ss_pred HHHHhCCCc
Confidence 999999766
|
| >3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* | Back alignment and structure |
|---|
Probab=99.94 E-value=9.2e-27 Score=193.70 Aligned_cols=155 Identities=23% Similarity=0.232 Sum_probs=136.9
Q ss_pred CCCCCCChHHHHHHhcCCHHHHHHHHHhc-cccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCc
Q 039483 77 VTAKGDTRSRHVAAKFDHCDIVSVLIERA-KLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHS 155 (360)
Q Consensus 77 ~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~ 155 (360)
.|.+|.|| ||.|+..|+.++++.|++.+ .+++. .+..|. ||||+|+..|+
T Consensus 4 ~~~~~~~~-l~~A~~~g~~~~v~~ll~~~~~~~~~------------------~~~~g~---------t~L~~A~~~~~- 54 (165)
T 3twr_A 4 GNSEADRQ-LLEAAKAGDVETVKKLCTVQSVNCRD------------------IEGRQS---------TPLHFAAGYNR- 54 (165)
T ss_dssp --CHHHHH-HHHHHHHTCHHHHHHHCCTTTTTCCC------------------TTTTCC---------CHHHHHHHTTC-
T ss_pred CcchhhHH-HHHHHHhCCHHHHHHHHHcCCCCccc------------------cccCCC---------CHHHHHHHcCh-
Confidence 46778899 99999999999999999854 34444 666664 88888899999
Q ss_pred HHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCC
Q 039483 156 SHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRN 235 (360)
Q Consensus 156 ~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~ 235 (360)
.+++++|+++|++++. +|..|.||||+|+..++. +++++|++.+ .+++..|..|+||||+|+..|+
T Consensus 55 ~~~v~~Ll~~g~~~~~---~~~~g~t~L~~A~~~~~~----------~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~ 120 (165)
T 3twr_A 55 VSVVEYLLQHGADVHA---KDKGGLVPLHNACSYGHY----------EVAELLVKHG-AVVNVADLWKFTPLHEAAAKGK 120 (165)
T ss_dssp HHHHHHHHHTTCCTTC---CCTTSCCHHHHHHHTTCH----------HHHHHHHHTT-CCTTCCCTTCCCHHHHHHHTTC
T ss_pred HHHHHHHHhcCCCCCc---cCCCCCCHHHHHHHcCcH----------HHHHHHHhCC-CCCCCcCCCCCCHHHHHHHcCC
Confidence 9999999999999999 999999999999999999 9999999998 8899999999999999999999
Q ss_pred HHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-ccccc
Q 039483 236 YLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLA 277 (360)
Q Consensus 236 ~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~ 277 (360)
.+++++|+++|+++ +.+|. .|+||||+|.. ++.+ +++|+
T Consensus 121 ~~~v~~Ll~~ga~~-~~~~~-~g~t~l~~a~~-~~~~i~~~L~ 160 (165)
T 3twr_A 121 YEICKLLLQHGADP-TKKNR-DGNTPLDLVKD-GDTDIQDLLR 160 (165)
T ss_dssp HHHHHHHHHTTCCT-TCCCT-TSCCTGGGSCT-TCHHHHHHHH
T ss_pred HHHHHHHHHcCCCC-cccCC-CCCChhHhHhc-CChHHHHHHh
Confidence 99999999999999 99999 99999999866 5555 65554
|
| >1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B | Back alignment and structure |
|---|
Probab=99.94 E-value=2.6e-26 Score=189.05 Aligned_cols=150 Identities=19% Similarity=0.171 Sum_probs=141.0
Q ss_pred cCHHHHHHhcCCcHHHHHHHHhh-CCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccC
Q 039483 143 KIPLCMAAEYEHSSHTVVAILKS-CTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQ 221 (360)
Q Consensus 143 ~t~L~~A~~~g~~~~~~~~Ll~~-g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~ 221 (360)
.||||.|+..|+ .++++.|++. +.+++. ++..|.||||+ +..|+. +++++|++.+ .+++..|.
T Consensus 3 ~~~L~~A~~~g~-~~~v~~ll~~~~~~~~~---~~~~g~t~L~~-~~~~~~----------~~v~~Ll~~g-~~~~~~~~ 66 (156)
T 1bd8_A 3 GDRLSGAAARGD-VQEVRRLLHRELVHPDA---LNRFGKTALQV-MMFGST----------AIALELLKQG-ASPNVQDT 66 (156)
T ss_dssp HHHHHHHHHHTC-HHHHHHHHHTTCCCTTC---CCTTSCCHHHH-SCTTCH----------HHHHHHHHTT-CCTTCCCT
T ss_pred chHHHHHHHhCC-HHHHHHHHHhhCcCccc---cCCCCCcHHHH-HHcCCH----------HHHHHHHHCC-CCCCCcCC
Confidence 389999999999 9999999998 347888 99999999999 999999 9999999998 88999999
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-cccccc-ccCccCCCCCCcHHHHHHHcC
Q 039483 222 CWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLAS-SLMDEGDAKGNTTVHFFAAVH 299 (360)
Q Consensus 222 ~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~~-~~~~~~d~~g~Tpl~~A~~~~ 299 (360)
.|+||||+|+..|+.+++++|+++|+++ +.+|. .|+||||+|+..++.+ +++|+. ++++.+|..|+||||+|++.|
T Consensus 67 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~g~t~l~~A~~~~ 144 (156)
T 1bd8_A 67 SGTSPVHDAARTGFLDTLKVLVEHGADV-NVPDG-TGALPIHLAVQEGHTAVVSFLAAESDLHRRDARGLTPLELALQRG 144 (156)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCS-CCCCT-TSCCHHHHHHHHTCHHHHHHHHTTSCTTCCCTTSCCHHHHHHHSC
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCC-CCCcHHHHHHHhChHHHHHHHHhccCCCCcCCCCCCHHHHHHHcC
Confidence 9999999999999999999999999999 99999 9999999999999988 888875 888899999999999999999
Q ss_pred CHHHHHHHhhh
Q 039483 300 RKEIFDDLSGR 310 (360)
Q Consensus 300 ~~~i~~~l~~~ 310 (360)
+.++++.|.++
T Consensus 145 ~~~~v~~Ll~~ 155 (156)
T 1bd8_A 145 AQDLVDILQGH 155 (156)
T ss_dssp CHHHHHHHHTT
T ss_pred cHHHHHHHHhh
Confidence 99999999875
|
| >1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B | Back alignment and structure |
|---|
Probab=99.93 E-value=8.6e-27 Score=206.21 Aligned_cols=204 Identities=11% Similarity=0.016 Sum_probs=142.6
Q ss_pred CCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHH
Q 039483 23 PQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLI 102 (360)
Q Consensus 23 ~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll 102 (360)
.++.+|||.|+..|+.+.++.|++. +..+ + .+..|.|| ||.|+..|+.+++++|+
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~----------------------g~~~-~-~~~~~~t~-L~~A~~~g~~~~v~~Ll 57 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAH----------------------GMRV-K-FNPLPLAL-LLDSSLEGEFDLVQRII 57 (239)
T ss_dssp ----------------------------------------------------------CHHH-HHHHHHHTCHHHHHHHT
T ss_pred ccccccCchhhhhhhHHHHHHHhcc----------------------CCCc-c-cCchhhHH-HHHHHHcCCHHHHHHHH
Confidence 3467999999999999999999985 3333 3 23678999 99999999999999999
Q ss_pred HhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcH
Q 039483 103 ERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQA 182 (360)
Q Consensus 103 ~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~ 182 (360)
+.|++++. +|..|. ||||+|+..|+ .+++++|+++|++++. +|..|.||
T Consensus 58 ~~g~~~~~------------------~d~~g~---------t~L~~A~~~g~-~~~v~~Ll~~ga~~~~---~d~~g~tp 106 (239)
T 1ycs_B 58 YEVDDPSL------------------PNDEGI---------TALHNAVCAGH-TEIVKFLVQFGVNVNA---ADSDGWTP 106 (239)
T ss_dssp STTSSCCC------------------CCTTSC---------CHHHHHHHHTC-HHHHHHHHHHTCCTTC---CCTTCCCH
T ss_pred HcCCCCCC------------------cCCCCC---------CHHHHHHHcCC-HHHHHHHHHcCCCCCc---cCCCCCCH
Confidence 99999988 788885 88888899999 9999999999999999 99999999
Q ss_pred HHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCC-hHHHHH--HHcCCHHHHHHHHhcCCcccccc------
Q 039483 183 LHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWW-TPIHYA--AYHRNYLILKLILKIDRTAAKIA------ 253 (360)
Q Consensus 183 Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~-t~Lh~A--~~~~~~~~v~~Ll~~g~~~~~~~------ 253 (360)
||+|+..|+. +++++|++++ .+++..+..|. ||||+| +..|+.+++++|++.|+++ +..
T Consensus 107 L~~A~~~~~~----------~~v~~Ll~~g-a~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~-~~~~~~~~~ 174 (239)
T 1ycs_B 107 LHCAASCNNV----------QVCKFLVESG-AAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKM-GIMNKGVIY 174 (239)
T ss_dssp HHHHHHTTCH----------HHHHHHHHTT-CCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHT-TTTGGGEEE
T ss_pred HHHHHHcCCH----------HHHHHHHHcC-CCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcc-cccccceEE
Confidence 9999999999 9999999999 88898888777 999999 7889999999999999887 665
Q ss_pred ---ccCCCCchhhhhhcCCccccccccccc--------CccCCCCCCcHHHHHH
Q 039483 254 ---DKDRKMTALHLVHGPKGCQNNMLASSL--------MDEGDAKGNTTVHFFA 296 (360)
Q Consensus 254 ---d~~~g~tpLh~A~~~~~~~~~~L~~~~--------~~~~d~~g~Tpl~~A~ 296 (360)
+. .+.++++++...+.. ++.|...+ ....+..|.+|.++..
T Consensus 175 al~d~-~~~~~~eLa~~~G~~-i~vl~~~~~~~~~Ww~~~~~~~~G~~P~~yv~ 226 (239)
T 1ycs_B 175 ALWDY-EPQNDDELPMKEGDC-MTIIHREDEDEIEWWWARLNDKEGYVPRNLLG 226 (239)
T ss_dssp ESSCB-CCSSTTBCCBCSSCE-EEECCCCTTSCSSEEEEEETTEEEEEEGGGEE
T ss_pred EEecc-CCCCCCcccccCCCE-EEEEEecCCCCCCEEEEEECCcEEEeehHHee
Confidence 44 678888887665543 22332211 1244556777776653
|
| >1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.5e-25 Score=180.59 Aligned_cols=134 Identities=13% Similarity=0.081 Sum_probs=125.0
Q ss_pred cccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHH
Q 039483 70 RQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMA 149 (360)
Q Consensus 70 ~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A 149 (360)
+..+ +.+|..|.|| ||+|+..|+.+++++|+++|++++. +|..|. ||||+|
T Consensus 2 ~~~~-~~~~~~g~t~-L~~A~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~---------t~L~~A 52 (136)
T 1d9s_A 2 SPGI-HMLGGSSDAG-LATAAARGQVETVRQLLEAGADPNA------------------LNRFGR---------RPIQVM 52 (136)
T ss_dssp CCCC-SCCCCCCSCH-HHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTCC---------TTTTTS
T ss_pred CCCc-cCCCCCCccH-HHHHHHcCCHHHHHHHHHcCCCcCC------------------cCCCCC---------CHHHHH
Confidence 4567 8899999999 9999999999999999999999988 788886 677777
Q ss_pred HhcCCcHHHHHHHHhhCCCCCccccCCCC-CCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHH
Q 039483 150 AEYEHSSHTVVAILKSCTSVSHIYMKAPM-ERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIH 228 (360)
Q Consensus 150 ~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~-g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh 228 (360)
+. |+ .+++++|+++|++++. +|.. |.||||+|+..|+. +++++|++.+ .+++.+|..|+||||
T Consensus 53 ~~-~~-~~~v~~Ll~~g~~~~~---~~~~~g~t~L~~A~~~~~~----------~~v~~Ll~~g-a~~~~~d~~g~tpl~ 116 (136)
T 1d9s_A 53 MM-GS-AQVAELLLLHGAEPNC---ADPATLTRPVHDAAREGFL----------DTLVVLHRAG-ARLDVCDAWGRLPVD 116 (136)
T ss_dssp TT-SC-HHHHHHHHHHTCCSSC---CBTTTTBCHHHHHHHHTCH----------HHHHHHHHTC-CCCCCCSSSSSCHHH
T ss_pred Hc-CC-HHHHHHHHHCCCCCCC---cCCCCCCCHHHHHHHcCCH----------HHHHHHHHcC-CCCCccCCCCCCHHH
Confidence 88 99 9999999999999999 9999 99999999999999 9999999999 889999999999999
Q ss_pred HHHHcCCHHHHHHHHhcCCc
Q 039483 229 YAAYHRNYLILKLILKIDRT 248 (360)
Q Consensus 229 ~A~~~~~~~~v~~Ll~~g~~ 248 (360)
+|+..++.+++++|+++|+|
T Consensus 117 ~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 117 LAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999999875
|
| >1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A | Back alignment and structure |
|---|
Probab=99.93 E-value=8.1e-26 Score=186.53 Aligned_cols=145 Identities=11% Similarity=0.031 Sum_probs=116.0
Q ss_pred CCCCCCCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCC
Q 039483 75 QPVTAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEH 154 (360)
Q Consensus 75 ~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~ 154 (360)
...+..|.|| ||+|+..|+.+++++|+++|++++. .|..|.||| |+|+ .|+
T Consensus 6 ~~~~~~~~t~-L~~A~~~g~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L---------~~A~-~~~ 56 (156)
T 1bi7_B 6 GSSMEPSADW-LATAAARGRVEEVRALLEAGANPNA------------------PNSYGRRPI---------QVMM-MGS 56 (156)
T ss_dssp ----CCSTTH-HHHHHHHTCHHHHHHHHTTTCCTTC------------------CCSSSCCTT---------TSSC-TTC
T ss_pred cCCCccchHH-HHHHHHcCCHHHHHHHHHcCCCCCC------------------CCCCCCCHH---------HHHH-cCC
Confidence 4567889999 9999999999999999999999988 788887555 4443 688
Q ss_pred cHHHHHHHHhhCCCCCccccCCCCCCc-HHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHc
Q 039483 155 SSHTVVAILKSCTSVSHIYMKAPMERQ-ALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYH 233 (360)
Q Consensus 155 ~~~~~~~Ll~~g~~~~~~~~~d~~g~t-~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~ 233 (360)
.+++++|+++|++++. +|..|.| |||+|+..|+. +++++|++++ .+++.+|..|+||||+|+..
T Consensus 57 -~~~v~~Ll~~g~~~~~---~d~~g~ttpL~~A~~~~~~----------~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~~~ 121 (156)
T 1bi7_B 57 -ARVAELLLLHGAEPNC---ADPATLTRPVHDAAREGFL----------DTLVVLHRAG-ARLDVRDAWGRLPVDLAEEL 121 (156)
T ss_dssp -HHHHHHHHTTTCCCCC---CCTTTCCCHHHHHHHHTCH----------HHHHHHHHHT-CCSSCCCTTCCCHHHHHHHH
T ss_pred -HHHHHHHHHcCCCCCC---cCCCCCcHHHHHHHHCCCH----------HHHHHHHHcC-CCCcccCCCCCCHHHHHHHh
Confidence 9999999999999999 9999999 99999999999 9999999998 88999999999999999999
Q ss_pred CCHHHHHHHHhcCCccccccccCCCCchhhhh
Q 039483 234 RNYLILKLILKIDRTAAKIADKDRKMTALHLV 265 (360)
Q Consensus 234 ~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A 265 (360)
|+.+++++|+++|+++ +.++. .|.||.+-+
T Consensus 122 ~~~~~v~~Ll~~ga~~-~~~~~-~g~t~~~~~ 151 (156)
T 1bi7_B 122 GHRDVARYLRAAAGGT-RGSNH-ARIDAAEGP 151 (156)
T ss_dssp TCHHHHHHHSSCC-------------------
T ss_pred CHHHHHHHHHHcCCCC-CccCc-CcCcccccC
Confidence 9999999999999999 99999 999998744
|
| >3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} | Back alignment and structure |
|---|
Probab=99.92 E-value=7.5e-26 Score=192.56 Aligned_cols=166 Identities=10% Similarity=0.014 Sum_probs=134.9
Q ss_pred CHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCC-CCCCChHHHHHHhcCCH----HHHHH
Q 039483 26 DPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVT-AKGDTRSRHVAAKFDHC----DIVSV 100 (360)
Q Consensus 26 ~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~-~~g~tp~Lh~A~~~g~~----~~v~~ 100 (360)
+++||.||+.|+.+.++.+++.++ +..+ ..|+|| ||+|+..|+. +++++
T Consensus 7 ~~~l~~Aa~~g~~~~~~~l~~~~~-------------------------~~~~~~~g~T~-Lh~A~~~~~~~~~~~iv~~ 60 (186)
T 3t8k_A 7 YRTVSAAAMLGTYEDFLELFEKGY-------------------------EDKESVLKSNI-LYDVLRNNNDEARYKISMF 60 (186)
T ss_dssp CSSHHHHHHHSCHHHHHHHHHHSS-------------------------SCHHHHHTTTH-HHHHTTCSCHHHHHHHHHH
T ss_pred ccHHHHHHHcCCHHHHHHHHhcCc-------------------------ccccccCCCCH-HHHHHHcCCcchHHHHHHH
Confidence 457999999999999999887422 2233 569999 9999999985 59999
Q ss_pred HHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCc-----HHHHHHHHhhCCCCCccccC
Q 039483 101 LIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHS-----SHTVVAILKSCTSVSHIYMK 175 (360)
Q Consensus 101 Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~-----~~~~~~Ll~~g~~~~~~~~~ 175 (360)
|+++|++++. +|..|+||| |+|+..|+. .+++++|+++|++++. +
T Consensus 61 Ll~~Gadvn~------------------~d~~g~TpL---------h~a~~~~~~~~~~~~~iv~~Ll~~Gadin~---~ 110 (186)
T 3t8k_A 61 LINKGADIKS------------------RTKEGTTLF---------FPLFQGGGNDITGTTELCKIFLEKGADITA---L 110 (186)
T ss_dssp HHHTTCCSSC------------------CCTTCCCTH---------HHHHHHCTTCHHHHHHHHHHHHHTTCCSSS---C
T ss_pred HHHCCCCCCC------------------CCCCCCcHH---------HHHHHcCCcchhhHHHHHHHHHHCCCCCCc---c
Confidence 9999999998 888997555 555555531 5789999999999999 9
Q ss_pred CCCCC-cHHHHHHhcCCcccccccCChHHHHHHHHh-cCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCcccccc
Q 039483 176 APMER-QALHAATMHIDLCKFNHTLSNDCAVQQLFE-GKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIA 253 (360)
Q Consensus 176 d~~g~-t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~-~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~ 253 (360)
|..|. ||||+|+..+.. .....+++++|++ .+ ++++.+|..|+||||+|+..|+.+++++|+++.... +.+
T Consensus 111 d~~g~ttpLh~A~~~~~~-----~~~~~~iv~~Ll~~~g-ad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~~-~~~ 183 (186)
T 3t8k_A 111 YKPYKIVVFKNIFNYFVD-----ENEMIPLYKLIFSQSG-LQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKY-NLK 183 (186)
T ss_dssp BGGGTBCTTGGGGGCCSC-----HHHHHHHHHHHHTSTT-CCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHHH-TCC
T ss_pred CCCcCchHHHHHHHcCCC-----hhhHHHHHHHHHHhcC-CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHHH-hcc
Confidence 99999 999999995443 0001168999999 77 889999999999999999999999999999876555 444
Q ss_pred c
Q 039483 254 D 254 (360)
Q Consensus 254 d 254 (360)
+
T Consensus 184 ~ 184 (186)
T 3t8k_A 184 E 184 (186)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-24 Score=184.30 Aligned_cols=158 Identities=10% Similarity=-0.035 Sum_probs=136.6
Q ss_pred cCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCC-CCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccC
Q 039483 143 KIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKA-PMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQ 221 (360)
Q Consensus 143 ~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d-~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~ 221 (360)
+++|+.|++.|+ .+.++.++..+. +. ++ ..|+||||+|+..++.. ...+++++|++.+ ++++.+|.
T Consensus 7 ~~~l~~Aa~~g~-~~~~~~l~~~~~--~~---~~~~~g~T~Lh~A~~~~~~~------~~~~iv~~Ll~~G-advn~~d~ 73 (186)
T 3t8k_A 7 YRTVSAAAMLGT-YEDFLELFEKGY--ED---KESVLKSNILYDVLRNNNDE------ARYKISMFLINKG-ADIKSRTK 73 (186)
T ss_dssp CSSHHHHHHHSC-HHHHHHHHHHSS--SC---HHHHHTTTHHHHHTTCSCHH------HHHHHHHHHHHTT-CCSSCCCT
T ss_pred ccHHHHHHHcCC-HHHHHHHHhcCc--cc---ccccCCCCHHHHHHHcCCcc------hHHHHHHHHHHCC-CCCCCCCC
Confidence 589999999999 999999998874 33 44 67999999999999750 0004899999999 89999999
Q ss_pred CCChHHHHHHHcCC------HHHHHHHHhcCCccccccccCCCC-chhhhhhcCCccc------ccccc---cccCccCC
Q 039483 222 CWWTPIHYAAYHRN------YLILKLILKIDRTAAKIADKDRKM-TALHLVHGPKGCQ------NNMLA---SSLMDEGD 285 (360)
Q Consensus 222 ~g~t~Lh~A~~~~~------~~~v~~Ll~~g~~~~~~~d~~~g~-tpLh~A~~~~~~~------~~~L~---~~~~~~~d 285 (360)
.|+||||+|+..++ .+++++|+++|+++ +.+|. .|+ ||||+|+..+..+ +++|+ +++++.+|
T Consensus 74 ~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadi-n~~d~-~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d 151 (186)
T 3t8k_A 74 EGTTLFFPLFQGGGNDITGTTELCKIFLEKGADI-TALYK-PYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKD 151 (186)
T ss_dssp TCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCS-SSCBG-GGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCC
T ss_pred CCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCC-CccCC-CcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccC
Confidence 99999999999987 68899999999999 99999 999 9999999855432 56665 49999999
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHhhhhcccc
Q 039483 286 AKGNTTVHFFAAVHRKEIFDDLSGRVKATM 315 (360)
Q Consensus 286 ~~g~Tpl~~A~~~~~~~i~~~l~~~~~~~~ 315 (360)
..|+||||+|++.++.++++.|..+.+.+.
T Consensus 152 ~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~ 181 (186)
T 3t8k_A 152 KWGLTALEFVKRCQKPIALKMMEDYIKKYN 181 (186)
T ss_dssp TTSCCHHHHHHTTTCHHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHHHHHHh
Confidence 999999999999999999999998876544
|
| >1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-23 Score=165.76 Aligned_cols=126 Identities=29% Similarity=0.380 Sum_probs=118.7
Q ss_pred CCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHH
Q 039483 80 KGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTV 159 (360)
Q Consensus 80 ~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~ 159 (360)
+|.|| ||+|+..|+.+++++|+++|++++. .|..|. ||||.|+..|+ .+++
T Consensus 1 ~g~t~-L~~A~~~~~~~~v~~Ll~~~~~~~~------------------~~~~g~---------t~L~~A~~~~~-~~~~ 51 (126)
T 1n0r_A 1 NGRTP-LHLAARNGHLEVVKLLLEAGADVNA------------------KDKNGR---------TPLHLAARNGH-LEVV 51 (126)
T ss_dssp CCCCH-HHHHHHHTCHHHHHHHHHHTCCTTC------------------CCTTSC---------CHHHHHHHHTC-HHHH
T ss_pred CCccH-HHHHHHcCcHHHHHHHHHcCCCCCC------------------cCCCCC---------cHHHHHHHcCc-HHHH
Confidence 58999 9999999999999999999999887 777775 78888889999 9999
Q ss_pred HHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHH
Q 039483 160 VAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLIL 239 (360)
Q Consensus 160 ~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v 239 (360)
++|++.|++++. ++..|.||||+|+..++. +++++|++.+ .+++.+|..|.||||+|+..++.+++
T Consensus 52 ~~Ll~~g~~~~~---~~~~g~t~l~~A~~~~~~----------~~~~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~~~~~~ 117 (126)
T 1n0r_A 52 KLLLEAGADVNA---KDKNGRTPLHLAARNGHL----------EVVKLLLEAG-ADVNAKDKNGRTPLHLAARNGHLEVV 117 (126)
T ss_dssp HHHHHTTCCTTC---CCTTSCCHHHHHHHTTCH----------HHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHcCCCCcc---cCCCCCcHHHHHHHcChH----------HHHHHHHHcC-CCCcccCCCCCCHHHHHHHcCcHHHH
Confidence 999999999999 999999999999999999 9999999998 78899999999999999999999999
Q ss_pred HHHHhcCCc
Q 039483 240 KLILKIDRT 248 (360)
Q Consensus 240 ~~Ll~~g~~ 248 (360)
++|+++|++
T Consensus 118 ~~Ll~~Gad 126 (126)
T 1n0r_A 118 KLLLEAGAY 126 (126)
T ss_dssp HHHHHHTCC
T ss_pred HHHHHcCCC
Confidence 999999975
|
| >2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 | Back alignment and structure |
|---|
Probab=99.91 E-value=3.5e-26 Score=215.15 Aligned_cols=214 Identities=14% Similarity=0.034 Sum_probs=162.2
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHh
Q 039483 25 IDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIER 104 (360)
Q Consensus 25 ~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~ 104 (360)
..+|||.||+.|+.++++.|++.... .... ...+..|.|| ||+||..|+.++|++|+++
T Consensus 92 ~~T~Lh~Aa~~G~~e~v~~Ll~~ga~-------------------~~~~-~~~~~~~~tp-L~~Aa~~G~~eiv~~Ll~~ 150 (376)
T 2aja_A 92 SEVICFVAAITGCSSALDTLCLLLTS-------------------DEIV-KVIQAENYQA-FRLAAENGHLHVLNRLCEL 150 (376)
T ss_dssp HHHHHHHHHHHCCHHHHHHHTTC--C-------------------CSSC-C--CHHHHHH-HHHHHHTTCHHHHHHHHHS
T ss_pred cCCHHHHHHHcCCHHHHHHHHHcCCc-------------------HHHH-HHhccCCCCH-HHHHHHcCCHHHHHHHHhC
Confidence 34999999999999999999883211 1122 3455678899 9999999999999999999
Q ss_pred ccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHH
Q 039483 105 AKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALH 184 (360)
Q Consensus 105 g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh 184 (360)
|+++.. ..++..+ .||||+|+..|+ .+++++|+++|++++.-. +|..|.||||
T Consensus 151 gad~~~-------------~~i~~~~------------~TpLh~Aa~~G~-~eiv~~Ll~~ga~~~~~~-~d~~g~TpL~ 203 (376)
T 2aja_A 151 APTEIM-------------AMIQAEN------------YHAFRLAAENGH-LHVLNRLCELAPTEATAM-IQAENYYAFR 203 (376)
T ss_dssp CTTTHH-------------HHHSHHH------------HHHHHHHHHTTC-HHHHHHHHHSCGGGHHHH-HHHHHHHHHH
T ss_pred CCCccc-------------cccCCCC------------CCHHHHHHHCCC-HHHHHHHHHcCCccchhc-cCCCCCCHHH
Confidence 975321 0011122 389999999999 999999999998754200 4567899999
Q ss_pred HHH-hcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhh
Q 039483 185 AAT-MHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALH 263 (360)
Q Consensus 185 ~A~-~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh 263 (360)
+|+ ..|+. +++++|++.+ . .|.||||+|+.+|+.+++++|+++|+++ +..+ ++++
T Consensus 204 ~Aa~~~G~~----------eiv~~Ll~~g-a-------~~~taL~~Aa~~g~~evv~lL~~~ga~~-~~~~-----~~l~ 259 (376)
T 2aja_A 204 WAAVGRGHH----------NVINFLLDCP-V-------MLAYAEIHEFEYGEKYVNPFIARHVNRL-KEMH-----DAFK 259 (376)
T ss_dssp HHHSTTCCH----------HHHHHHTTSH-H-------HHHHHHHCTTTTTTTTHHHHHHHHHHHH-HHHH-----TTTT
T ss_pred HHHHHCCCH----------HHHHHHHhCC-C-------ccchHHHHHHHCCCHHHHHHHHhcCccc-cccc-----HHHH
Confidence 999 99999 9999999865 3 2789999999999999999999999887 5443 3667
Q ss_pred hhhcCCccc-c---------------------------ccccc-------ccCccCCCCCCcHHHHHHHcCCHHHHHHHh
Q 039483 264 LVHGPKGCQ-N---------------------------NMLAS-------SLMDEGDAKGNTTVHFFAAVHRKEIFDDLS 308 (360)
Q Consensus 264 ~A~~~~~~~-~---------------------------~~L~~-------~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~ 308 (360)
.|+..++.+ + ++|++ .......+.++||||+|++.|+.++++.|+
T Consensus 260 ~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~L~~A~~~g~~e~v~lLl 339 (376)
T 2aja_A 260 LSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLL 339 (376)
T ss_dssp TTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHT
T ss_pred HHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCCCCCccHHHHHHHHcCcHHHHHHHH
Confidence 776666555 2 11111 111233456889999999999999999998
Q ss_pred hh
Q 039483 309 GR 310 (360)
Q Consensus 309 ~~ 310 (360)
..
T Consensus 340 ~~ 341 (376)
T 2aja_A 340 SI 341 (376)
T ss_dssp TS
T ss_pred cC
Confidence 75
|
| >2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C | Back alignment and structure |
|---|
Probab=99.90 E-value=8.3e-24 Score=170.28 Aligned_cols=128 Identities=18% Similarity=0.152 Sum_probs=117.0
Q ss_pred CCCCCCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCc
Q 039483 76 PVTAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHS 155 (360)
Q Consensus 76 ~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~ 155 (360)
.....|.|| ||+||..|+.+++++|+++|++++. .|..|. ||||+|+..|+
T Consensus 9 ~~~~~~~t~-l~~A~~~g~~~~v~~Ll~~g~~~~~------------------~~~~g~---------t~L~~A~~~~~- 59 (136)
T 2jab_A 9 HHGSDLGKK-LLEAARAGQDDEVRILMANGADVNA------------------KDEYGL---------TPLYLATAHGH- 59 (136)
T ss_dssp ---CHHHHH-HHHHHHHTCHHHHHHHHHTTCCTTC------------------CCTTSC---------CHHHHHHHHTC-
T ss_pred cccccccHH-HHHHHHhCCHHHHHHHHHcCCCCCC------------------cCCCCC---------CHHHHHHHcCC-
Confidence 345567899 9999999999999999999999988 778875 88888899999
Q ss_pred HHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCC
Q 039483 156 SHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRN 235 (360)
Q Consensus 156 ~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~ 235 (360)
.+++++|+++|++++. +|..|.||||+|+..|+. +++++|++.+ .+++..|..|+||||+|+..|+
T Consensus 60 ~~~v~~Ll~~g~~~~~---~d~~g~t~L~~A~~~~~~----------~~v~~Ll~~g-~~~~~~~~~g~tpl~~A~~~~~ 125 (136)
T 2jab_A 60 LEIVEVLLKNGADVNA---VDAIGFTPLHLAAFIGHL----------EIAEVLLKHG-ADVNAQDKFGKTAFDISIGNGN 125 (136)
T ss_dssp HHHHHHHHHTTCCTTC---CCTTCCCHHHHHHHHTCH----------HHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCCCc---CCCCCCCHHHHHHHcCCH----------HHHHHHHHcC-CCCcCcCCCCCCHHHHHHHCCC
Confidence 9999999999999999 999999999999999999 9999999998 8899999999999999999999
Q ss_pred HHHHHHHHhcC
Q 039483 236 YLILKLILKID 246 (360)
Q Consensus 236 ~~~v~~Ll~~g 246 (360)
.+++++|+++|
T Consensus 126 ~~~~~~Ll~~G 136 (136)
T 2jab_A 126 EDLAEILQKLN 136 (136)
T ss_dssp HHHHHHHHHC-
T ss_pred HHHHHHHHHcC
Confidence 99999999876
|
| >1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A | Back alignment and structure |
|---|
Probab=99.89 E-value=2.1e-23 Score=171.91 Aligned_cols=142 Identities=12% Similarity=0.083 Sum_probs=114.6
Q ss_pred CCCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHH
Q 039483 22 QPQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVL 101 (360)
Q Consensus 22 ~~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~L 101 (360)
...+.++||.|+..|+.++++.|++. +.++ +.+|..|.|| ||+|+ .|+.+++++|
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~----------------------g~~~-~~~~~~g~t~-L~~A~-~~~~~~v~~L 63 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEA----------------------GANP-NAPNSYGRRP-IQVMM-MGSARVAELL 63 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTT----------------------TCCT-TCCCSSSCCT-TTSSC-TTCHHHHHHH
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHc----------------------CCCC-CCCCCCCCCH-HHHHH-cCCHHHHHHH
Confidence 45567899999999999999999883 6667 8889999999 99985 9999999999
Q ss_pred HHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcC-HHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCC
Q 039483 102 IERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKI-PLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMER 180 (360)
Q Consensus 102 l~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t-~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~ 180 (360)
+++|++++. +|..|. | |||+|+..|+ .+++++|+++|++++. +|..|.
T Consensus 64 l~~g~~~~~------------------~d~~g~---------ttpL~~A~~~~~-~~~v~~Ll~~ga~~~~---~d~~g~ 112 (156)
T 1bi7_B 64 LLHGAEPNC------------------ADPATL---------TRPVHDAAREGF-LDTLVVLHRAGARLDV---RDAWGR 112 (156)
T ss_dssp HTTTCCCCC------------------CCTTTC---------CCHHHHHHHHTC-HHHHHHHHHHTCCSSC---CCTTCC
T ss_pred HHcCCCCCC------------------cCCCCC---------cHHHHHHHHCCC-HHHHHHHHHcCCCCcc---cCCCCC
Confidence 999999988 788875 6 8888899999 9999999999999999 999999
Q ss_pred cHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHH
Q 039483 181 QALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYA 230 (360)
Q Consensus 181 t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A 230 (360)
||||+|+..|+. +++++|++++ .+++..+..|.||.+-+
T Consensus 113 tpl~~A~~~~~~----------~~v~~Ll~~g-a~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 113 LPVDLAEELGHR----------DVARYLRAAA-GGTRGSNHARIDAAEGP 151 (156)
T ss_dssp CHHHHHHHHTCH----------HHHHHHSSCC------------------
T ss_pred CHHHHHHHhCHH----------HHHHHHHHcC-CCCCccCcCcCcccccC
Confidence 999999999999 9999999999 88999999999987743
|
| >3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-22 Score=172.32 Aligned_cols=136 Identities=18% Similarity=0.176 Sum_probs=126.2
Q ss_pred cCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCcccccccc-C
Q 039483 143 KIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGID-Q 221 (360)
Q Consensus 143 ~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d-~ 221 (360)
.||||.|+..|+ .++++.|++ |.+++. +|..|.||||+|+..|+. +++++|++.+ .+++..+ .
T Consensus 45 ~t~L~~A~~~g~-~~~v~~Ll~-~~~~~~---~d~~g~t~L~~A~~~~~~----------~~v~~Ll~~g-a~~~~~~~~ 108 (183)
T 3deo_A 45 ETPWWTAARKAD-EQALSQLLE-DRDVDA---VDENGRTALLFVAGLGSD----------KCVRLLAEAG-ADLDHRDMR 108 (183)
T ss_dssp HHHHHHHHHTTC-HHHHHHHTT-TSCTTC---CCTTSCCHHHHHHHHTCH----------HHHHHHHHTT-CCTTCCCSS
T ss_pred CCHHHHHHHcCC-HHHHHHHHh-cCCCCC---cCCCCCCHHHHHHHcCCH----------HHHHHHHHcC-CCCCcCCCC
Confidence 589999999999 999999999 999999 999999999999999999 9999999998 8888888 8
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCcccccccccccCccCCCCCCcHHHHHHHcCCH
Q 039483 222 CWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQNNMLASSLMDEGDAKGNTTVHFFAAVHRK 301 (360)
Q Consensus 222 ~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~~~~L~~~~~~~~d~~g~Tpl~~A~~~~~~ 301 (360)
.|+||||+|+..|+.+++++|+++|+++ +.+|. .|+||||+|+..++ ...+.+|+++|++.|+.
T Consensus 109 ~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~d~-~g~tpl~~A~~~~~--------------~~~~~~~l~~a~~~~~~ 172 (183)
T 3deo_A 109 GGLTALHMAAGYVRPEVVEALVELGADI-EVEDE-RGLTALELAREILK--------------TTPKGNPMQFGRRIGLE 172 (183)
T ss_dssp SSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCT-TSCCHHHHHHHHHH--------------TCCCCSHHHHHHHHHHH
T ss_pred CCCCHHHHHHhcCcHHHHHHHHHcCCCC-cCCCC-CCCCHHHHHHHhcc--------------CcccccHHHHHHHcCHH
Confidence 9999999999999999999999999999 99999 99999999976432 24678999999999999
Q ss_pred HHHHHHhhh
Q 039483 302 EIFDDLSGR 310 (360)
Q Consensus 302 ~i~~~l~~~ 310 (360)
++++.|.++
T Consensus 173 ~i~~~L~~~ 181 (183)
T 3deo_A 173 KVINVLEGQ 181 (183)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHHh
Confidence 999998765
|
| >1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 | Back alignment and structure |
|---|
Probab=99.88 E-value=3.7e-22 Score=160.53 Aligned_cols=125 Identities=14% Similarity=0.113 Sum_probs=115.3
Q ss_pred CCCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHH
Q 039483 22 QPQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVL 101 (360)
Q Consensus 22 ~~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~L 101 (360)
...+.+|||.|+..|+.++++.|++. +.++ +.+|..|.|| ||+|+. |+.+++++|
T Consensus 9 ~~~g~t~L~~A~~~~~~~~v~~Ll~~----------------------g~~~-~~~~~~g~t~-L~~A~~-~~~~~v~~L 63 (136)
T 1d9s_A 9 GGSSDAGLATAAARGQVETVRQLLEA----------------------GADP-NALNRFGRRP-IQVMMM-GSAQVAELL 63 (136)
T ss_dssp CCCCSCHHHHHHHTTCHHHHHHHHHT----------------------TCCT-TCCCTTCCTT-TTTSTT-SCHHHHHHH
T ss_pred CCCCccHHHHHHHcCCHHHHHHHHHc----------------------CCCc-CCcCCCCCCH-HHHHHc-CCHHHHHHH
Confidence 45677999999999999999999984 5667 8889999999 999999 999999999
Q ss_pred HHhccccCcccccccccchhhHHHhhcccCC-CCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCC
Q 039483 102 IERAKLVQHEDEELESGVGASRQMIRMTNKE-KHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMER 180 (360)
Q Consensus 102 l~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~ 180 (360)
+++|++++. +|.. |. ||||+|+..|+ .+++++|+++|++++. +|..|.
T Consensus 64 l~~g~~~~~------------------~~~~~g~---------t~L~~A~~~~~-~~~v~~Ll~~ga~~~~---~d~~g~ 112 (136)
T 1d9s_A 64 LLHGAEPNC------------------ADPATLT---------RPVHDAAREGF-LDTLVVLHRAGARLDV---CDAWGR 112 (136)
T ss_dssp HHHTCCSSC------------------CBTTTTB---------CHHHHHHHHTC-HHHHHHHHHTCCCCCC---CSSSSS
T ss_pred HHCCCCCCC------------------cCCCCCC---------CHHHHHHHcCC-HHHHHHHHHcCCCCCc---cCCCCC
Confidence 999999988 7777 75 88888899999 9999999999999999 999999
Q ss_pred cHHHHHHhcCCcccccccCChHHHHHHHHhcC
Q 039483 181 QALHAATMHIDLCKFNHTLSNDCAVQQLFEGK 212 (360)
Q Consensus 181 t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~ 212 (360)
||||+|+..++. +++++|++++
T Consensus 113 tpl~~A~~~~~~----------~~~~~Ll~~G 134 (136)
T 1d9s_A 113 LPVDLAEEQGHR----------DIARYLHAAT 134 (136)
T ss_dssp CHHHHHHHHTCH----------HHHHHHHHHH
T ss_pred CHHHHHHHcCCH----------HHHHHHHHcC
Confidence 999999999999 9999999887
|
| >2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C | Back alignment and structure |
|---|
Probab=99.88 E-value=8.5e-22 Score=158.43 Aligned_cols=126 Identities=18% Similarity=0.187 Sum_probs=114.5
Q ss_pred CCCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHH
Q 039483 22 QPQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVL 101 (360)
Q Consensus 22 ~~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~L 101 (360)
...+.++||.||..|+.++++.|++. +.++ +.+|..|.|| ||+|+..|+.+++++|
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~----------------------g~~~-~~~~~~g~t~-L~~A~~~~~~~~v~~L 66 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMAN----------------------GADV-NAKDEYGLTP-LYLATAHGHLEIVEVL 66 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHT----------------------TCCT-TCCCTTSCCH-HHHHHHHTCHHHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHc----------------------CCCC-CCcCCCCCCH-HHHHHHcCCHHHHHHH
Confidence 34567899999999999999999984 6667 8889999999 9999999999999999
Q ss_pred HHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCc
Q 039483 102 IERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQ 181 (360)
Q Consensus 102 l~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t 181 (360)
+++|++++. +|..|. ||||+|+..|+ .+++++|+++|++++. +|..|.|
T Consensus 67 l~~g~~~~~------------------~d~~g~---------t~L~~A~~~~~-~~~v~~Ll~~g~~~~~---~~~~g~t 115 (136)
T 2jab_A 67 LKNGADVNA------------------VDAIGF---------TPLHLAAFIGH-LEIAEVLLKHGADVNA---QDKFGKT 115 (136)
T ss_dssp HHTTCCTTC------------------CCTTCC---------CHHHHHHHHTC-HHHHHHHHHTTCCTTC---CCTTSCC
T ss_pred HHcCCCCCc------------------CCCCCC---------CHHHHHHHcCC-HHHHHHHHHcCCCCcC---cCCCCCC
Confidence 999999988 788885 78888889999 9999999999999999 9999999
Q ss_pred HHHHHHhcCCcccccccCChHHHHHHHHhcC
Q 039483 182 ALHAATMHIDLCKFNHTLSNDCAVQQLFEGK 212 (360)
Q Consensus 182 ~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~ 212 (360)
|||+|+..++. +++++|+++|
T Consensus 116 pl~~A~~~~~~----------~~~~~Ll~~G 136 (136)
T 2jab_A 116 AFDISIGNGNE----------DLAEILQKLN 136 (136)
T ss_dssp HHHHHHHTTCH----------HHHHHHHHC-
T ss_pred HHHHHHHCCCH----------HHHHHHHHcC
Confidence 99999999999 9999999864
|
| >3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.7e-22 Score=179.16 Aligned_cols=137 Identities=19% Similarity=0.182 Sum_probs=127.1
Q ss_pred cCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCcccccccc-C
Q 039483 143 KIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGID-Q 221 (360)
Q Consensus 143 ~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d-~ 221 (360)
.||||.|+..|+ .++++.|++ |++++. +|..|.||||+|+..|+. +++++|++.+ .+++..+ .
T Consensus 46 ~t~L~~A~~~g~-~~~v~~Ll~-~~~~~~---~d~~g~t~L~~A~~~g~~----------~~v~~Ll~~g-a~~~~~~~~ 109 (244)
T 3ui2_A 46 ETPWWTAARKAD-EQALSQLLE-DRDVDA---VDENGRTALLFVAGLGSD----------KCVRLLAEAG-ADLDHRDMR 109 (244)
T ss_dssp HHHHHHHHTTTC-HHHHHHTTT-TCCTTC---BCTTSCBHHHHHHHHTCH----------HHHHHHHHTT-CCTTCCCSS
T ss_pred CCHHHHHHHcCC-HHHHHHHHc-CCCCCC---cCCCCCCHHHHHHHCCCH----------HHHHHHHHcC-CCCCcCCCC
Confidence 489999999999 999999999 999999 999999999999999999 9999999998 8888888 8
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCcccccccccccCccCCCCCCcHHHHHHHcCCH
Q 039483 222 CWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQNNMLASSLMDEGDAKGNTTVHFFAAVHRK 301 (360)
Q Consensus 222 ~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~~~~L~~~~~~~~d~~g~Tpl~~A~~~~~~ 301 (360)
.|+||||+|+..|+.+++++|+++|+++ +.+|. .|+||||+|+.. .....+.|||++|+..|+.
T Consensus 110 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~-~g~t~l~~A~~~--------------~~~~~~~~~l~~a~~~g~~ 173 (244)
T 3ui2_A 110 GGLTALHMAAGYVRPEVVEALVELGADI-EVEDE-RGLTALELAREI--------------LKTTPKGNPMQFGRRIGLE 173 (244)
T ss_dssp SCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-TCCCHHHHHHHH--------------HTTCCCSSHHHHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCC-CCCcHHHHHHHH--------------HhccCCCCHHHHHHHcChH
Confidence 8999999999999999999999999999 99999 999999999653 2236789999999999999
Q ss_pred HHHHHHhhhh
Q 039483 302 EIFDDLSGRV 311 (360)
Q Consensus 302 ~i~~~l~~~~ 311 (360)
++++.|.+..
T Consensus 174 ~iv~~L~~~~ 183 (244)
T 3ui2_A 174 KVINVLEGQV 183 (244)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 9999998863
|
| >3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 | Back alignment and structure |
|---|
Probab=99.87 E-value=4.9e-23 Score=165.79 Aligned_cols=112 Identities=19% Similarity=0.156 Sum_probs=59.8
Q ss_pred CHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCC
Q 039483 144 IPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCW 223 (360)
Q Consensus 144 t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g 223 (360)
||||+|+..|+ .+++++|++.|++++. +|..|.||||+|+..++. +++++|++.+ .+++..|..|
T Consensus 12 t~L~~A~~~~~-~~~~~~Ll~~g~~~~~---~~~~g~t~L~~A~~~~~~----------~~~~~Ll~~g-~~~~~~~~~g 76 (137)
T 3c5r_A 12 TLLHIASIKGD-IPSVEYLLQNGSDPNV---KDHAGWTPLHEACNHGHL----------KVVELLLQHK-ALVNTTGYQN 76 (137)
T ss_dssp CHHHHHHHHTC-HHHHHHHHHTTCCSCC---CCTTSCCHHHHHHHTTCH----------HHHHHHHHTT-CCTTCCCGGG
T ss_pred CHHHHHHHcCC-HHHHHHHHHcCCCCCc---CCCCCCCHHHHHHHcCCH----------HHHHHHHHcC-CcccCcCCCC
Confidence 44444444555 5555555555555554 555555555555555555 5555555554 4455555555
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc
Q 039483 224 WTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ 272 (360)
Q Consensus 224 ~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~ 272 (360)
+||||+|+..|+.+++++|+++|+++ +.+|. .|.||||+|+..+..+
T Consensus 77 ~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~-~g~tpl~~A~~~~~~~ 123 (137)
T 3c5r_A 77 DSPLHDAAKNGHVDIVKLLLSYGASR-NAVNI-FGLRPVDYTDDESMKS 123 (137)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-TSCCGGGGCCCHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCC-CCCCHHHHHhhccHHH
Confidence 55555555555555555555555555 55555 5555555555444333
|
| >3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 | Back alignment and structure |
|---|
Probab=99.87 E-value=3.2e-22 Score=161.00 Aligned_cols=123 Identities=19% Similarity=0.202 Sum_probs=114.2
Q ss_pred CCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccc
Q 039483 175 KAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIAD 254 (360)
Q Consensus 175 ~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d 254 (360)
+|..|.||||+|+..|+. +++++|++.+ .+++..|..|+||||+|+..|+.+++++|+++|+++ +.+|
T Consensus 6 ~~~~g~t~L~~A~~~~~~----------~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~ 73 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDI----------PSVEYLLQNG-SDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALV-NTTG 73 (137)
T ss_dssp CCTTCCCHHHHHHHHTCH----------HHHHHHHHTT-CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCC
T ss_pred cCCCCCCHHHHHHHcCCH----------HHHHHHHHcC-CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcc-cCcC
Confidence 789999999999999999 9999999998 789999999999999999999999999999999999 9999
Q ss_pred cCCCCchhhhhhcCCccc-cccccc--ccCccCCCCCCcHHHHHHHcCCHHHHHHHhhh
Q 039483 255 KDRKMTALHLVHGPKGCQ-NNMLAS--SLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGR 310 (360)
Q Consensus 255 ~~~g~tpLh~A~~~~~~~-~~~L~~--~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~ 310 (360)
. .|+||||+|+..++.+ +++|+. ++++.+|..|+||+|+|+..+..++++.+.+.
T Consensus 74 ~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~ 131 (137)
T 3c5r_A 74 Y-QNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKN 131 (137)
T ss_dssp G-GGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC---
T ss_pred C-CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhcccc
Confidence 9 9999999999999999 888884 89999999999999999999999988877654
|
| >3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A | Back alignment and structure |
|---|
Probab=99.86 E-value=1.4e-21 Score=173.25 Aligned_cols=143 Identities=14% Similarity=0.146 Sum_probs=126.4
Q ss_pred CCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHH
Q 039483 23 PQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLI 102 (360)
Q Consensus 23 ~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll 102 (360)
..+.+|||.||+.|+.++++.|++ +.++ +.+|..|.|| ||+||..|+.++|++|+
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-----------------------~~~~-~~~d~~g~t~-L~~A~~~g~~~~v~~Ll 97 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-----------------------DRDV-DAVDENGRTA-LLFVAGLGSDKCVRLLA 97 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-----------------------TCCT-TCBCTTSCBH-HHHHHHHTCHHHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-----------------------CCCC-CCcCCCCCCH-HHHHHHCCCHHHHHHHH
Confidence 356799999999999999999988 4566 8889999999 99999999999999999
Q ss_pred HhccccCcccccccccchhhHHHhhccc-CCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCc
Q 039483 103 ERAKLVQHEDEELESGVGASRQMIRMTN-KEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQ 181 (360)
Q Consensus 103 ~~g~~~~~~~~~~~~~~~~~~~~l~~~d-~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t 181 (360)
++|++++. ++ ..|. ||||+|+..|+ .+++++|+++|++++. +|..|.|
T Consensus 98 ~~ga~~~~------------------~~~~~g~---------t~L~~A~~~g~-~~~v~~Ll~~ga~~~~---~d~~g~t 146 (244)
T 3ui2_A 98 EAGADLDH------------------RDMRGGL---------TALHMAAGYVR-PEVVEALVELGADIEV---EDERGLT 146 (244)
T ss_dssp HTTCCTTC------------------CCSSSCC---------CHHHHHHHTTC-HHHHHHHHHTTCCTTC---CCTTCCC
T ss_pred HcCCCCCc------------------CCCCCCC---------CHHHHHHHcCC-HHHHHHHHHCCCCCCC---CCCCCCc
Confidence 99999988 55 6675 88888899999 9999999999999999 9999999
Q ss_pred HHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCcc
Q 039483 182 ALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTA 249 (360)
Q Consensus 182 ~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~ 249 (360)
|||+|+..++. ..+.||||+|+..|+.+++++|++.+.+.
T Consensus 147 ~l~~A~~~~~~----------------------------~~~~~~l~~a~~~g~~~iv~~L~~~~~~~ 186 (244)
T 3ui2_A 147 ALELAREILKT----------------------------TPKGNPMQFGRRIGLEKVINVLEGQVFEY 186 (244)
T ss_dssp HHHHHHHHHTT----------------------------CCCSSHHHHHHHHHHHHHHHHHHHHHEEE
T ss_pred HHHHHHHHHhc----------------------------cCCCCHHHHHHHcChHHHHHHHHHhcccc
Confidence 99999864433 35689999999999999999999876553
|
| >1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 | Back alignment and structure |
|---|
Probab=99.86 E-value=5.6e-21 Score=150.61 Aligned_cols=123 Identities=28% Similarity=0.324 Sum_probs=113.7
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHh
Q 039483 25 IDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIER 104 (360)
Q Consensus 25 ~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~ 104 (360)
+.++||.|++.|+.++++.|++. +..+ +.+|..|.|| ||+|+..|+.+++++|+++
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~----------------------~~~~-~~~~~~g~t~-L~~A~~~~~~~~~~~Ll~~ 57 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEA----------------------GADV-NAKDKNGRTP-LHLAARNGHLEVVKLLLEA 57 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHH----------------------TCCT-TCCCTTSCCH-HHHHHHHTCHHHHHHHHHT
T ss_pred CccHHHHHHHcCcHHHHHHHHHc----------------------CCCC-CCcCCCCCcH-HHHHHHcCcHHHHHHHHHc
Confidence 56899999999999999999984 5566 7888999999 9999999999999999999
Q ss_pred ccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHH
Q 039483 105 AKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALH 184 (360)
Q Consensus 105 g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh 184 (360)
|++++. +|..|. ||||+|+..|+ .+++++|+++|++++. +|..|.||||
T Consensus 58 g~~~~~------------------~~~~g~---------t~l~~A~~~~~-~~~~~~Ll~~g~~~~~---~~~~g~t~l~ 106 (126)
T 1n0r_A 58 GADVNA------------------KDKNGR---------TPLHLAARNGH-LEVVKLLLEAGADVNA---KDKNGRTPLH 106 (126)
T ss_dssp TCCTTC------------------CCTTSC---------CHHHHHHHTTC-HHHHHHHHHTTCCTTC---CCTTSCCHHH
T ss_pred CCCCcc------------------cCCCCC---------cHHHHHHHcCh-HHHHHHHHHcCCCCcc---cCCCCCCHHH
Confidence 999887 777775 78888888999 9999999999999999 9999999999
Q ss_pred HHHhcCCcccccccCChHHHHHHHHhcC
Q 039483 185 AATMHIDLCKFNHTLSNDCAVQQLFEGK 212 (360)
Q Consensus 185 ~A~~~~~~~~~~~~~~~~~~~~~Ll~~~ 212 (360)
+|+..++. +++++|++++
T Consensus 107 ~A~~~~~~----------~~~~~Ll~~G 124 (126)
T 1n0r_A 107 LAARNGHL----------EVVKLLLEAG 124 (126)
T ss_dssp HHHHTTCH----------HHHHHHHHHT
T ss_pred HHHHcCcH----------HHHHHHHHcC
Confidence 99999999 9999999987
|
| >3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A | Back alignment and structure |
|---|
Probab=99.86 E-value=2.8e-21 Score=163.52 Aligned_cols=139 Identities=14% Similarity=0.170 Sum_probs=122.7
Q ss_pred CCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHH
Q 039483 23 PQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLI 102 (360)
Q Consensus 23 ~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll 102 (360)
..+.+|||.|+..|+.+.++.|++ +.++ +.+|..|.|| ||+|+..|+.+++++|+
T Consensus 42 ~~g~t~L~~A~~~g~~~~v~~Ll~-----------------------~~~~-~~~d~~g~t~-L~~A~~~~~~~~v~~Ll 96 (183)
T 3deo_A 42 SEYETPWWTAARKADEQALSQLLE-----------------------DRDV-DAVDENGRTA-LLFVAGLGSDKCVRLLA 96 (183)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHTT-----------------------TSCT-TCCCTTSCCH-HHHHHHHTCHHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHh-----------------------cCCC-CCcCCCCCCH-HHHHHHcCCHHHHHHHH
Confidence 356799999999999999999988 4566 8889999999 99999999999999999
Q ss_pred HhccccCcccccccccchhhHHHhhccc-CCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCc
Q 039483 103 ERAKLVQHEDEELESGVGASRQMIRMTN-KEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQ 181 (360)
Q Consensus 103 ~~g~~~~~~~~~~~~~~~~~~~~l~~~d-~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t 181 (360)
++|++++. +| ..|. ||||+|+..|+ .+++++|+++|++++. +|..|.|
T Consensus 97 ~~ga~~~~------------------~~~~~g~---------tpL~~A~~~~~-~~~v~~Ll~~ga~~~~---~d~~g~t 145 (183)
T 3deo_A 97 EAGADLDH------------------RDMRGGL---------TALHMAAGYVR-PEVVEALVELGADIEV---EDERGLT 145 (183)
T ss_dssp HTTCCTTC------------------CCSSSSC---------CHHHHHHHTTC-HHHHHHHHHHTCCTTC---CCTTSCC
T ss_pred HcCCCCCc------------------CCCCCCC---------CHHHHHHhcCc-HHHHHHHHHcCCCCcC---CCCCCCC
Confidence 99999987 55 7775 88888889999 9999999999999999 9999999
Q ss_pred HHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhc
Q 039483 182 ALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKI 245 (360)
Q Consensus 182 ~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ 245 (360)
|||+|+..++. ..+.++|++|+..|+.+++++|.++
T Consensus 146 pl~~A~~~~~~----------------------------~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 146 ALELAREILKT----------------------------TPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp HHHHHHHHHHT----------------------------CCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhccC----------------------------cccccHHHHHHHcCHHHHHHHHHHh
Confidence 99999876555 2356899999999999999999765
|
| >3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A | Back alignment and structure |
|---|
Probab=99.86 E-value=2.2e-22 Score=175.56 Aligned_cols=137 Identities=17% Similarity=0.063 Sum_probs=99.9
Q ss_pred CCCCCCCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCC
Q 039483 75 QPVTAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEH 154 (360)
Q Consensus 75 ~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~ 154 (360)
+..+..|.|| ||+||..|+.+++++|++.|++++. +|..|. ||||+|+..|+
T Consensus 67 ~~~~~~g~t~-L~~A~~~g~~~~v~~Ll~~g~~~~~------------------~~~~g~---------t~L~~A~~~~~ 118 (222)
T 3ehr_A 67 AEQAESIDNP-LHEAAKRGNLSWLRECLDNRVGVNG------------------LDKAGS---------TALYWACHGGH 118 (222)
T ss_dssp HHHEEEESCH-HHHHHHHTCHHHHHHHHHTTCCTTC------------------CCTTSC---------CHHHHHHHTTC
T ss_pred cccccccccc-cccccccCcHHHHHHHHhCCCCccc------------------cCCCCC---------CHHHHHHHcCC
Confidence 4455667888 8888888888888888888888776 666764 67777777888
Q ss_pred cHHHHHHHHhh-CCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHc
Q 039483 155 SSHTVVAILKS-CTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYH 233 (360)
Q Consensus 155 ~~~~~~~Ll~~-g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~ 233 (360)
.+++++|++. |++++. +|..|.||||+|+..|+. +++++|++.+ ++++.+|..|+||||+|+..
T Consensus 119 -~~~v~~Ll~~~g~~~~~---~d~~g~tpL~~A~~~~~~----------~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~ 183 (222)
T 3ehr_A 119 -KDIVEMLFTQPNIELNQ---QNKLGDTALHAAAWKGYA----------DIVQLLLAKG-ARTDLRNIEKKLAFDMATNA 183 (222)
T ss_dssp -HHHHHHHTTSTTCCCCC---CCTTSCCHHHHHHHHTCH----------HHHHHHHHHT-CCSCCCCTTSCCHHHHCCSH
T ss_pred -HHHHHHHHcCCCCCccc---cCCCCCCHHHHHHHcCCH----------HHHHHHHHcC-CCCccccCCCCCHHHHhcch
Confidence 8888888887 888888 888888888888888888 8888888887 77788888888888888888
Q ss_pred CCHHHHHHHHhcCCcccccccc
Q 039483 234 RNYLILKLILKIDRTAAKIADK 255 (360)
Q Consensus 234 ~~~~~v~~Ll~~g~~~~~~~d~ 255 (360)
++.++++.|++.|+.. ..++.
T Consensus 184 ~~~~~l~~l~~~~~~~-~~~~~ 204 (222)
T 3ehr_A 184 ACASLLKKKQGTDAVR-TLSNA 204 (222)
T ss_dssp HHHHHHC---------------
T ss_pred hHHHHHHHHhccchhh-hccch
Confidence 8888888888887776 55554
|
| >2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.1e-21 Score=179.33 Aligned_cols=147 Identities=14% Similarity=0.035 Sum_probs=121.2
Q ss_pred CCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhc---CCcH
Q 039483 80 KGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEY---EHSS 156 (360)
Q Consensus 80 ~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~---g~~~ 156 (360)
.+.++ ||.|+..|+.+.++.|++.|++++..-. . ...+..|. ||||+|+.. |+ .
T Consensus 150 ~~~~~-L~~A~~~g~~~~v~~ll~~g~d~~~~~~---~---------~~~~~~g~---------t~Lh~A~~~~~~~~-~ 206 (301)
T 2b0o_E 150 PEPQR-LWTAICNRDLLSVLEAFANGQDFGQPLP---G---------PDAQAPEE---------LVLHLAVKVANQAS-L 206 (301)
T ss_dssp -CHHH-HHHHHHTTCHHHHHHHHHTTCCTTSCEE---C---------SSSCSCEE---------CHHHHHHHTCCTTT-H
T ss_pred chHHH-HhhhhhccCHHHHHHHHhcCCcccccCC---C---------cccCCCCc---------cHHHHHHHhcccCc-H
Confidence 34578 9999999999999999999998875100 0 00356664 777777776 78 9
Q ss_pred HHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCH
Q 039483 157 HTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNY 236 (360)
Q Consensus 157 ~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~ 236 (360)
+++++|+++|++++. +|..|+||||+|+..|+. +++++|++++ ++++.+|..|.||||+|+..|+.
T Consensus 207 ~iv~~Ll~~gadvn~---~d~~G~TpLh~A~~~g~~----------~~v~~Ll~~g-ad~~~~d~~G~TpL~~A~~~~~~ 272 (301)
T 2b0o_E 207 PLVDFIIQNGGHLDA---KAADGNTALHYAALYNQP----------DCLKLLLKGR-ALVGTVNEAGETALDIARKKHHK 272 (301)
T ss_dssp HHHHHHHHHSSCTTC---CCTTCCCHHHHHHHTTCH----------HHHHHHHHTT-CCCSCCCTTSCCHHHHHHHHTCH
T ss_pred HHHHHHHhcCCCCCC---CCCCCCCHHHHHHHcCCH----------HHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCH
Confidence 999999999999999 999999999999999999 9999999998 88999999999999999999999
Q ss_pred HHHHHHHhcCCccccccccCCCCchhhhhhcCCcc
Q 039483 237 LILKLILKIDRTAAKIADKDRKMTALHLVHGPKGC 271 (360)
Q Consensus 237 ~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~ 271 (360)
+++++|+++|++ .|.||||+|+..++.
T Consensus 273 ~iv~~Ll~~ga~--------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 273 ECEELLEQAQAG--------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHHHHHHHHH--------TTSSCCC--------
T ss_pred HHHHHHHHhcCC--------CCCChhHHHHhcCCc
Confidence 999999998865 478999999887653
|
| >3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A | Back alignment and structure |
|---|
Probab=99.86 E-value=8.1e-22 Score=155.64 Aligned_cols=105 Identities=19% Similarity=0.157 Sum_probs=54.1
Q ss_pred CHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCC
Q 039483 144 IPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCW 223 (360)
Q Consensus 144 t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g 223 (360)
||||.|+..|+ .+++++|++.|++++. +|..|.||||+|+..++. +++++|++.+ .+++.+|..|
T Consensus 9 ~~l~~A~~~~~-~~~v~~ll~~~~~~~~---~~~~g~t~L~~A~~~~~~----------~~v~~Ll~~g-~~~~~~d~~g 73 (123)
T 3aaa_C 9 KEFMWALKNGD-LDEVKDYVAKGEDVNR---TLEGGRKPLHYAADCGQL----------EILEFLLLKG-ADINAPDKHH 73 (123)
T ss_dssp HHHHHHHHTTC-HHHHHHHHHTTCCTTS---CCTTSSCHHHHHHHTTCH----------HHHHHHHTTT-CCTTCCCTTS
T ss_pred hHHHHHHHcCC-HHHHHHHHHcCCCcCc---cCCCCCcHHHHHHHcCCH----------HHHHHHHHcC-CCCCcCCCCC
Confidence 44444444555 5555555555554444 455555555555555555 5555555544 4445555555
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhh
Q 039483 224 WTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLV 265 (360)
Q Consensus 224 ~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A 265 (360)
+||||+|+..|+.+++++|+++|+++ +.+|. .|.||||+|
T Consensus 74 ~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~~~-~g~t~l~~A 113 (123)
T 3aaa_C 74 ITPLLSAVYEGHVSCVKLLLSKGADK-TVKGP-DGLTAFEAT 113 (123)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT-TSCCHHHHC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCC-CCCCHHHHh
Confidence 55555555555555555555555555 55555 555555555
|
| >2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.8e-21 Score=176.69 Aligned_cols=139 Identities=16% Similarity=0.140 Sum_probs=117.3
Q ss_pred CHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCC------CCCCCCChHHHHHHhc---CCHH
Q 039483 26 DPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQP------VTAKGDTRSRHVAAKF---DHCD 96 (360)
Q Consensus 26 ~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~------~~~~g~tp~Lh~A~~~---g~~~ 96 (360)
.++|+.|+..|+++.++.|++. +.++ +. .+..|.|| ||+|+.. |+.+
T Consensus 152 ~~~L~~A~~~g~~~~v~~ll~~----------------------g~d~-~~~~~~~~~~~~g~t~-Lh~A~~~~~~~~~~ 207 (301)
T 2b0o_E 152 PQRLWTAICNRDLLSVLEAFAN----------------------GQDF-GQPLPGPDAQAPEELV-LHLAVKVANQASLP 207 (301)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHT----------------------TCCT-TSCEECSSSCSCEECH-HHHHHHTCCTTTHH
T ss_pred HHHHhhhhhccCHHHHHHHHhc----------------------CCcc-cccCCCcccCCCCccH-HHHHHHhcccCcHH
Confidence 4679999999999999999874 3333 33 68889999 9999997 8999
Q ss_pred HHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCC
Q 039483 97 IVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKA 176 (360)
Q Consensus 97 ~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d 176 (360)
++++|+++|++++. +|..|. ||||+|+..|+ .+++++|+++|++++. +|
T Consensus 208 iv~~Ll~~gadvn~------------------~d~~G~---------TpLh~A~~~g~-~~~v~~Ll~~gad~~~---~d 256 (301)
T 2b0o_E 208 LVDFIIQNGGHLDA------------------KAADGN---------TALHYAALYNQ-PDCLKLLLKGRALVGT---VN 256 (301)
T ss_dssp HHHHHHHHSSCTTC------------------CCTTCC---------CHHHHHHHTTC-HHHHHHHHHTTCCCSC---CC
T ss_pred HHHHHHhcCCCCCC------------------CCCCCC---------CHHHHHHHcCC-HHHHHHHHHcCCCCCC---cC
Confidence 99999999999998 788885 78888889999 9999999999999999 99
Q ss_pred CCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCH
Q 039483 177 PMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNY 236 (360)
Q Consensus 177 ~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~ 236 (360)
..|.||||+|+..++. +++++|++.+ .+ .|.||||+|+.+|+.
T Consensus 257 ~~G~TpL~~A~~~~~~----------~iv~~Ll~~g-a~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 257 EAGETALDIARKKHHK----------ECEELLEQAQ-AG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp TTSCCHHHHHHHHTCH----------HHHHHHHHHH-HH------TTSSCCC--------
T ss_pred CCCCCHHHHHHHcCCH----------HHHHHHHHhc-CC------CCCChhHHHHhcCCc
Confidence 9999999999999999 9999999988 32 688999999998863
|
| >3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A | Back alignment and structure |
|---|
Probab=99.85 E-value=3.1e-21 Score=152.29 Aligned_cols=116 Identities=19% Similarity=0.110 Sum_probs=103.3
Q ss_pred CCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccc
Q 039483 175 KAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIAD 254 (360)
Q Consensus 175 ~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d 254 (360)
.+..|.||||+|+..|+. +++++|++.+ .+++..|..|+||||+|+..|+.+++++|++.|+++ +.+|
T Consensus 3 ~~~~~~~~l~~A~~~~~~----------~~v~~ll~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d 70 (123)
T 3aaa_C 3 LGSMCDKEFMWALKNGDL----------DEVKDYVAKG-EDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADI-NAPD 70 (123)
T ss_dssp ----CHHHHHHHHHTTCH----------HHHHHHHHTT-CCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCT-TCCC
T ss_pred cccccchHHHHHHHcCCH----------HHHHHHHHcC-CCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CcCC
Confidence 456789999999999999 9999999998 789999999999999999999999999999999999 9999
Q ss_pred cCCCCchhhhhhcCCccc-cccccc--ccCccCCCCCCcHHHHHHHcCCHHH
Q 039483 255 KDRKMTALHLVHGPKGCQ-NNMLAS--SLMDEGDAKGNTTVHFFAAVHRKEI 303 (360)
Q Consensus 255 ~~~g~tpLh~A~~~~~~~-~~~L~~--~~~~~~d~~g~Tpl~~A~~~~~~~i 303 (360)
. .|+||||+|+..++.+ +++|+. ++++.+|..|+||+|+|...+..++
T Consensus 71 ~-~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~l 121 (123)
T 3aaa_C 71 K-HHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKAL 121 (123)
T ss_dssp T-TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHHHHH
T ss_pred C-CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHHHHH
Confidence 9 9999999999999998 888884 8899999999999999954444433
|
| >2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 | Back alignment and structure |
|---|
Probab=99.85 E-value=8e-23 Score=192.26 Aligned_cols=112 Identities=16% Similarity=0.072 Sum_probs=53.8
Q ss_pred CHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCcccccc--ccC
Q 039483 144 IPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKG--IDQ 221 (360)
Q Consensus 144 t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~--~d~ 221 (360)
||||+|+..|+ .+++++|+++|+++......+.. .||||+|+..|+. +++++|++++ .+++. .|.
T Consensus 130 tpL~~Aa~~G~-~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~----------eiv~~Ll~~g-a~~~~~~~d~ 196 (376)
T 2aja_A 130 QAFRLAAENGH-LHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHL----------HVLNRLCELA-PTEATAMIQA 196 (376)
T ss_dssp HHHHHHHHTTC-HHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCH----------HHHHHHHHSC-GGGHHHHHHH
T ss_pred CHHHHHHHcCC-HHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCH----------HHHHHHHHcC-CccchhccCC
Confidence 45555555555 55555555555432110001111 5555555555555 5555555554 33333 444
Q ss_pred CCChHHHHHH-HcCCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-ccccc
Q 039483 222 CWWTPIHYAA-YHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLA 277 (360)
Q Consensus 222 ~g~t~Lh~A~-~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~ 277 (360)
.|+||||+|+ ..|+.+++++|++.|. .|.||||+|+..++.+ +++|+
T Consensus 197 ~g~TpL~~Aa~~~G~~eiv~~Ll~~ga---------~~~taL~~Aa~~g~~evv~lL~ 245 (376)
T 2aja_A 197 ENYYAFRWAAVGRGHHNVINFLLDCPV---------MLAYAEIHEFEYGEKYVNPFIA 245 (376)
T ss_dssp HHHHHHHHHHSTTCCHHHHHHHTTSHH---------HHHHHHHCTTTTTTTTHHHHHH
T ss_pred CCCCHHHHHHHHCCCHHHHHHHHhCCC---------ccchHHHHHHHCCCHHHHHHHH
Confidence 5555555555 5555555555554331 2445555555555555 44444
|
| >3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A | Back alignment and structure |
|---|
Probab=99.84 E-value=2.6e-21 Score=168.69 Aligned_cols=129 Identities=17% Similarity=0.090 Sum_probs=109.7
Q ss_pred cCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCC
Q 039483 143 KIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQC 222 (360)
Q Consensus 143 ~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~ 222 (360)
.||||+|+..|+ .+++++|++.|++++. +|..|.||||+|+..|+. +++++|++....+++..|..
T Consensus 74 ~t~L~~A~~~g~-~~~v~~Ll~~g~~~~~---~~~~g~t~L~~A~~~~~~----------~~v~~Ll~~~g~~~~~~d~~ 139 (222)
T 3ehr_A 74 DNPLHEAAKRGN-LSWLRECLDNRVGVNG---LDKAGSTALYWACHGGHK----------DIVEMLFTQPNIELNQQNKL 139 (222)
T ss_dssp SCHHHHHHHHTC-HHHHHHHHHTTCCTTC---CCTTSCCHHHHHHHTTCH----------HHHHHHTTSTTCCCCCCCTT
T ss_pred ccccccccccCc-HHHHHHHHhCCCCccc---cCCCCCCHHHHHHHcCCH----------HHHHHHHcCCCCCccccCCC
Confidence 488899999999 9999999999999999 999999999999999999 99999999844889999999
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-cccccc--ccCccCCCC
Q 039483 223 WWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLAS--SLMDEGDAK 287 (360)
Q Consensus 223 g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~~--~~~~~~d~~ 287 (360)
|+||||+|+..|+.+++++|+++|+++ +.+|. .|+||||+|+..+..+ ++.|++ +....++..
T Consensus 140 g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~~~-~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~ 205 (222)
T 3ehr_A 140 GDTALHAAAWKGYADIVQLLLAKGART-DLRNI-EKKLAFDMATNAACASLLKKKQGTDAVRTLSNAE 205 (222)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHHTCCS-CCCCT-TSCCHHHHCCSHHHHHHHC---------------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC-ccccC-CCCCHHHHhcchhHHHHHHHHhccchhhhccchh
Confidence 999999999999999999999999999 99999 9999999999888777 777764 444444443
|
| >3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A | Back alignment and structure |
|---|
Probab=99.82 E-value=5.3e-20 Score=172.43 Aligned_cols=145 Identities=15% Similarity=0.081 Sum_probs=114.1
Q ss_pred CCCChHHHHHHhc-CCHHHHHHHHHhccccCcccccccccchhhHHHhhccc--CCCCchHHHhhhcCHHHHHHhcCCcH
Q 039483 80 KGDTRSRHVAAKF-DHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTN--KEKHTTLHEAYNKIPLCMAAEYEHSS 156 (360)
Q Consensus 80 ~g~tp~Lh~A~~~-g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d--~~g~t~Lh~a~~~t~L~~A~~~g~~~ 156 (360)
.+.|| ||.|+.. |+.+++++|+++|++++. .+ ..|. ||||+|+..|+ .
T Consensus 198 ~~~t~-L~~Aa~~~g~~~~v~~LL~~Gadvn~------------------~~~~~~g~---------TpLh~Aa~~g~-~ 248 (368)
T 3jue_A 198 HPGAL-LFRASGHPPSLPTMADALAHGADVNW------------------VNGGQDNA---------TPLIQATAANS-L 248 (368)
T ss_dssp CHHHH-HHHHTSSSCCHHHHHHHHHTTCCTTC------------------CCTTTTCC---------CHHHHHHHTTC-H
T ss_pred CCCcH-HHHHHHccCCHHHHHHHHHcCCCCCc------------------cccccCCC---------CHHHHHHHCCC-H
Confidence 34579 9999999 999999999999999987 55 6664 88888889999 9
Q ss_pred HHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCH
Q 039483 157 HTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNY 236 (360)
Q Consensus 157 ~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~ 236 (360)
+++++|+++|++++. +|..|+||||+|+..|+. +++++|++++ ++++..|..|.||||+|+..++.
T Consensus 249 ~iv~~LL~~Gadvn~---~d~~G~TpLh~A~~~g~~----------~~v~~LL~~G-ad~~~~d~~G~TpL~~A~~~g~~ 314 (368)
T 3jue_A 249 LACEFLLQNGANVNQ---ADSAGRGPLHHATILGHT----------GLACLFLKRG-ADLGARDSEGRDPLTIAMETANA 314 (368)
T ss_dssp HHHHHHHHTTCCTTC---CCTTSCCHHHHHHHHTCH----------HHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHHHHcCCCCCC---CCCCCCCHHHHHHHcCcH----------HHHHHHHHCc-CCCCCcCCCCCCHHHHHHHCCCH
Confidence 999999999999999 999999999999999999 9999999998 88999999999999999999999
Q ss_pred HHHHHHHhcCCccc--cccccCCCCchhhhhhcC
Q 039483 237 LILKLILKIDRTAA--KIADKDRKMTALHLVHGP 268 (360)
Q Consensus 237 ~~v~~Ll~~g~~~~--~~~d~~~g~tpLh~A~~~ 268 (360)
+++++|++.+.... ...+. .+.|+++++...
T Consensus 315 ~iv~lLl~~~~~~~~~~~~~~-~~~t~l~i~~~~ 347 (368)
T 3jue_A 315 DIVTLLRLAKMREAEAAQGQA-GDETYLDIFRDF 347 (368)
T ss_dssp HHHHHHHHHHC-----------------------
T ss_pred HHHHHHHHcCCCcccccccCC-CCCCHHHHHHHH
Confidence 99999997663321 33444 677888777443
|
| >1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.6e-19 Score=163.19 Aligned_cols=130 Identities=13% Similarity=0.052 Sum_probs=115.8
Q ss_pred CChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhc---CCcHHH
Q 039483 82 DTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEY---EHSSHT 158 (360)
Q Consensus 82 ~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~---g~~~~~ 158 (360)
.++ |+.|+..|+.+.++.+++.|++++.. .+++..|..|. ||||+|+.. |+ .++
T Consensus 131 l~~-l~~a~~~~d~~~~~~ll~~g~~~~~~------------~~l~~~~~~g~---------t~Lh~A~~~~~~~~-~~~ 187 (278)
T 1dcq_A 131 LHS-LCEAVKTRDIFGLLQAYADGVDLTEK------------IPLANGHEPDE---------TALHLAVRSVDRTS-LHI 187 (278)
T ss_dssp HHH-HHHHHHTTCHHHHHHHHHTTCCTTSB------------CCCSSCSSTTC---------BHHHHHHHHCCTTT-HHH
T ss_pred hhh-hhhHhhhcccHHHHHHHHhhcchhhh------------ccccccccCCC---------CcchHHHHhcccch-HHH
Confidence 468 99999999999999999999986641 11333577775 777777888 88 999
Q ss_pred HHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHH
Q 039483 159 VVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLI 238 (360)
Q Consensus 159 ~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~ 238 (360)
+++|+++|++++. +|..|+||||+|+..|+. +++++|++.+ ++++.+|..|.||||+|+..|+.++
T Consensus 188 v~~Ll~~ga~in~---~d~~g~TpLh~A~~~g~~----------~~v~~Ll~~g-ad~~~~d~~g~tpL~~A~~~~~~~~ 253 (278)
T 1dcq_A 188 VDFLVQNSGNLDK---QTGKGSTALHYCCLTDNA----------ECLKLLLRGK-ASIEIANESGETPLDIAKRLKHEHC 253 (278)
T ss_dssp HHHHHHHCSCTTC---CCTTCCCHHHHHHHTTCH----------HHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHCCCCccc---cCCCCCCHHHHHHHcCCH----------HHHHHHHHcC-CCCCCccCCCCCHHHHHHHcCCHHH
Confidence 9999999999999 999999999999999999 9999999998 8899999999999999999999999
Q ss_pred HHHHHhcCCc
Q 039483 239 LKLILKIDRT 248 (360)
Q Consensus 239 v~~Ll~~g~~ 248 (360)
+++|+++|++
T Consensus 254 v~~Ll~~ga~ 263 (278)
T 1dcq_A 254 EELLTQALSG 263 (278)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHcCCC
Confidence 9999999854
|
| >3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A | Back alignment and structure |
|---|
Probab=99.79 E-value=6.1e-19 Score=165.25 Aligned_cols=159 Identities=14% Similarity=0.019 Sum_probs=112.9
Q ss_pred CCHHHHHHHHc-CChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCC--CCCCChHHHHHHhcCCHHHHHHH
Q 039483 25 IDPNLFKVAAA-GNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVT--AKGDTRSRHVAAKFDHCDIVSVL 101 (360)
Q Consensus 25 ~~~~L~~Aa~~-G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~--~~g~tp~Lh~A~~~g~~~~v~~L 101 (360)
..++||.|+.. |+++.++.|++. +.++ +..+ ..|.|| ||+|+..|+.++|++|
T Consensus 199 ~~t~L~~Aa~~~g~~~~v~~LL~~----------------------Gadv-n~~~~~~~g~Tp-Lh~Aa~~g~~~iv~~L 254 (368)
T 3jue_A 199 PGALLFRASGHPPSLPTMADALAH----------------------GADV-NWVNGGQDNATP-LIQATAANSLLACEFL 254 (368)
T ss_dssp HHHHHHHHTSSSCCHHHHHHHHHT----------------------TCCT-TCCCTTTTCCCH-HHHHHHTTCHHHHHHH
T ss_pred CCcHHHHHHHccCCHHHHHHHHHc----------------------CCCC-CccccccCCCCH-HHHHHHCCCHHHHHHH
Confidence 34699999999 999999999884 5666 7777 889999 9999999999999999
Q ss_pred HHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCc
Q 039483 102 IERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQ 181 (360)
Q Consensus 102 l~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t 181 (360)
+++|++++. .|..|. ||||+|+..|+ .+++++|+++|++++. +|..|.|
T Consensus 255 L~~Gadvn~------------------~d~~G~---------TpLh~A~~~g~-~~~v~~LL~~Gad~~~---~d~~G~T 303 (368)
T 3jue_A 255 LQNGANVNQ------------------ADSAGR---------GPLHHATILGH-TGLACLFLKRGADLGA---RDSEGRD 303 (368)
T ss_dssp HHTTCCTTC------------------CCTTSC---------CHHHHHHHHTC-HHHHHHHHHTTCCTTC---CCTTSCC
T ss_pred HHcCCCCCC------------------CCCCCC---------CHHHHHHHcCc-HHHHHHHHHCcCCCCC---cCCCCCC
Confidence 999999998 788885 78888889999 9999999999999999 9999999
Q ss_pred HHHHHHhcCCcccccccCChHHHHHHHHhcCcc--ccccccCCCChHHHHHHHcCC--HHHHHHHHhcCCc
Q 039483 182 ALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKS--MIKGIDQCWWTPIHYAAYHRN--YLILKLILKIDRT 248 (360)
Q Consensus 182 ~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~--~i~~~d~~g~t~Lh~A~~~~~--~~~v~~Ll~~g~~ 248 (360)
|||+|+..++. +++++|+..+.. .....+..+.|+++++..... .+-.+.|..++.+
T Consensus 304 pL~~A~~~g~~----------~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~~~~~~~~ekl~r~~~~ 364 (368)
T 3jue_A 304 PLTIAMETANA----------DIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFSLMASDDPEKLSRRSHD 364 (368)
T ss_dssp HHHHHHHTTCH----------HHHHHHHHHHC---------------------------------------
T ss_pred HHHHHHHCCCH----------HHHHHHHHcCCCcccccccCCCCCCHHHHHHHHHhhcCCCHHHHHhcCCC
Confidence 99999999999 999999977622 223445677888888766543 2333444444443
|
| >1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 | Back alignment and structure |
|---|
Probab=99.79 E-value=8.2e-19 Score=158.51 Aligned_cols=127 Identities=10% Similarity=0.085 Sum_probs=113.1
Q ss_pred CHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCcccccccccccccc-ccCCCCCCCCChHHHHHHhc---CCHHHHHHH
Q 039483 26 DPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQK-MCQPVTAKGDTRSRHVAAKF---DHCDIVSVL 101 (360)
Q Consensus 26 ~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~-~~~~~~~~g~tp~Lh~A~~~---g~~~~v~~L 101 (360)
.++|+.|+..|+++.++.+++.+.+.. ... + +..|..|.|| ||+|+.. |+.+++++|
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~-----------------~~~~l-~~~~~~g~t~-Lh~A~~~~~~~~~~~v~~L 191 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLT-----------------EKIPL-ANGHEPDETA-LHLAVRSVDRTSLHIVDFL 191 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTT-----------------SBCCC-SSCSSTTCBH-HHHHHHHCCTTTHHHHHHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchh-----------------hhccc-cccccCCCCc-chHHHHhcccchHHHHHHH
Confidence 368999999999999999988543321 222 5 6678899999 9999999 899999999
Q ss_pred HHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCc
Q 039483 102 IERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQ 181 (360)
Q Consensus 102 l~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t 181 (360)
+++|++++. +|..|. ||||+|+..|+ .+++++|+++|++++. +|..|.|
T Consensus 192 l~~ga~in~------------------~d~~g~---------TpLh~A~~~g~-~~~v~~Ll~~gad~~~---~d~~g~t 240 (278)
T 1dcq_A 192 VQNSGNLDK------------------QTGKGS---------TALHYCCLTDN-AECLKLLLRGKASIEI---ANESGET 240 (278)
T ss_dssp HHHCSCTTC------------------CCTTCC---------CHHHHHHHTTC-HHHHHHHHHTTCCTTC---CCTTSCC
T ss_pred HHCCCCccc------------------cCCCCC---------CHHHHHHHcCC-HHHHHHHHHcCCCCCC---ccCCCCC
Confidence 999999998 888885 78888899999 9999999999999999 9999999
Q ss_pred HHHHHHhcCCcccccccCChHHHHHHHHhcC
Q 039483 182 ALHAATMHIDLCKFNHTLSNDCAVQQLFEGK 212 (360)
Q Consensus 182 ~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~ 212 (360)
|||+|+..|+. +++++|++++
T Consensus 241 pL~~A~~~~~~----------~~v~~Ll~~g 261 (278)
T 1dcq_A 241 PLDIAKRLKHE----------HCEELLTQAL 261 (278)
T ss_dssp HHHHHHHTTCH----------HHHHHHHHHH
T ss_pred HHHHHHHcCCH----------HHHHHHHHcC
Confidence 99999999999 9999999987
|
| >1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 | Back alignment and structure |
|---|
Probab=99.79 E-value=6.9e-19 Score=131.67 Aligned_cols=91 Identities=29% Similarity=0.354 Sum_probs=87.2
Q ss_pred cCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCC
Q 039483 143 KIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQC 222 (360)
Q Consensus 143 ~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~ 222 (360)
+||||+|+..|+ .+++++|++.|++++. +|..|.||||+|+..++. +++++|++.+ .+++.+|..
T Consensus 3 ~t~L~~A~~~~~-~~~v~~Ll~~g~~~n~---~d~~g~t~L~~A~~~~~~----------~~v~~Ll~~g-a~~~~~d~~ 67 (93)
T 1n0q_A 3 RTPLHLAARNGH-LEVVKLLLEAGADVNA---KDKNGRTPLHLAARNGHL----------EVVKLLLEAG-ADVNAKDKN 67 (93)
T ss_dssp CCHHHHHHHHTC-HHHHHHHHHTTCCTTC---CCTTSCCHHHHHHHTTCH----------HHHHHHHHTT-CCTTCCCTT
T ss_pred CcHHHHHHHcCC-HHHHHHHHHcCCCCcc---cCCCCCCHHHHHHHcCCH----------HHHHHHHHcC-CCCCccCCC
Confidence 489999999999 9999999999999999 999999999999999999 9999999998 889999999
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCc
Q 039483 223 WWTPIHYAAYHRNYLILKLILKIDRT 248 (360)
Q Consensus 223 g~t~Lh~A~~~~~~~~v~~Ll~~g~~ 248 (360)
|+||||+|+..|+.+++++|+++|++
T Consensus 68 g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 68 GRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999999999999974
|
| >1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 | Back alignment and structure |
|---|
Probab=99.78 E-value=9.8e-19 Score=130.83 Aligned_cols=91 Identities=31% Similarity=0.391 Sum_probs=84.6
Q ss_pred CCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHH
Q 039483 80 KGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTV 159 (360)
Q Consensus 80 ~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~ 159 (360)
+|.|| ||+|+..|+.+++++|+++|++++. +|..|. ||||+|+..|+ .+++
T Consensus 1 ~g~t~-L~~A~~~~~~~~v~~Ll~~g~~~n~------------------~d~~g~---------t~L~~A~~~~~-~~~v 51 (93)
T 1n0q_A 1 NGRTP-LHLAARNGHLEVVKLLLEAGADVNA------------------KDKNGR---------TPLHLAARNGH-LEVV 51 (93)
T ss_dssp --CCH-HHHHHHHTCHHHHHHHHHTTCCTTC------------------CCTTSC---------CHHHHHHHTTC-HHHH
T ss_pred CCCcH-HHHHHHcCCHHHHHHHHHcCCCCcc------------------cCCCCC---------CHHHHHHHcCC-HHHH
Confidence 48999 9999999999999999999999988 788885 78888889999 9999
Q ss_pred HHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcC
Q 039483 160 VAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGK 212 (360)
Q Consensus 160 ~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~ 212 (360)
++|+++|++++. +|..|.||||+|+..|+. +++++|++.+
T Consensus 52 ~~Ll~~ga~~~~---~d~~g~t~l~~A~~~~~~----------~~~~~Ll~~g 91 (93)
T 1n0q_A 52 KLLLEAGADVNA---KDKNGRTPLHLAARNGHL----------EVVKLLLEAG 91 (93)
T ss_dssp HHHHHTTCCTTC---CCTTSCCHHHHHHHTTCH----------HHHHHHHHTT
T ss_pred HHHHHcCCCCCc---cCCCCCCHHHHHHHcCCH----------HHHHHHHHcC
Confidence 999999999999 999999999999999999 9999999887
|
| >2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.78 E-value=4.8e-19 Score=137.80 Aligned_cols=109 Identities=21% Similarity=0.152 Sum_probs=99.4
Q ss_pred CCCCCCCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCC
Q 039483 75 QPVTAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEH 154 (360)
Q Consensus 75 ~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~ 154 (360)
..+|.+|.|| ||+||..|+.+++++|+++|++++. +|..|. ||||+|+..|+
T Consensus 3 ~~~d~~g~t~-L~~A~~~~~~~~~~~Ll~~g~~~~~------------------~d~~g~---------t~L~~A~~~~~ 54 (115)
T 2l6b_A 3 MWGSKDGNTP-LHNAAKNGHAEEVKKLLSKGADVNA------------------RSKDGN---------TPLHLAAKNGH 54 (115)
T ss_dssp -CCSCSSCCH-HHHHHHHTCHHHHHHHTTTTCCSSC------------------CCSSSC---------CTTHHHHTTTC
T ss_pred cccCCCCCCH-HHHHHHcCCHHHHHHHHHcCCCCCC------------------cCCCCC---------CHHHHHHHcCc
Confidence 3578999999 9999999999999999999999888 788885 77788888999
Q ss_pred cHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChH
Q 039483 155 SSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTP 226 (360)
Q Consensus 155 ~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~ 226 (360)
.+++++|+++|++++. +|..|.||||+|+..++. +++++|++++ ++++..+..|.+|
T Consensus 55 -~~~~~~Ll~~g~~~~~---~d~~g~tpl~~A~~~~~~----------~~~~~Ll~~g-a~~n~~~~~~~~~ 111 (115)
T 2l6b_A 55 -AEIVKLLLAKGADVNA---RSKDGNTPEHLAKKNGHH----------EIVKLLDAKG-ADVNARSWGSSHH 111 (115)
T ss_dssp -HHHHHHHTTTTCCTTC---CCTTCCCTTHHHHTTTCH----------HHHHHHHTTS-SSHHHHSCCCC--
T ss_pred -HHHHHHHHHcCCCCcc---cCCCCCCHHHHHHHCCCH----------HHHHHHHHcC-CCCCcCCcccccc
Confidence 9999999999999999 999999999999999999 9999999999 8899999999887
|
| >2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.77 E-value=5.9e-19 Score=137.30 Aligned_cols=108 Identities=19% Similarity=0.144 Sum_probs=98.7
Q ss_pred ccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHH
Q 039483 129 TNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQL 208 (360)
Q Consensus 129 ~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~L 208 (360)
+|.+|. ||||+|+..|+ .+++++|+++|++++. +|..|.||||+|+..++. +++++|
T Consensus 5 ~d~~g~---------t~L~~A~~~~~-~~~~~~Ll~~g~~~~~---~d~~g~t~L~~A~~~~~~----------~~~~~L 61 (115)
T 2l6b_A 5 GSKDGN---------TPLHNAAKNGH-AEEVKKLLSKGADVNA---RSKDGNTPLHLAAKNGHA----------EIVKLL 61 (115)
T ss_dssp CSCSSC---------CHHHHHHHHTC-HHHHHHHTTTTCCSSC---CCSSSCCTTHHHHTTTCH----------HHHHHH
T ss_pred cCCCCC---------CHHHHHHHcCC-HHHHHHHHHcCCCCCC---cCCCCCCHHHHHHHcCcH----------HHHHHH
Confidence 567774 88888899999 9999999999999999 999999999999999999 999999
Q ss_pred HhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchh
Q 039483 209 FEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTAL 262 (360)
Q Consensus 209 l~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpL 262 (360)
++.+ .+++.+|..|+||||+|+..++.+++++|+++|+++ +.++. .|.+|-
T Consensus 62 l~~g-~~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~-n~~~~-~~~~~~ 112 (115)
T 2l6b_A 62 LAKG-ADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADV-NARSW-GSSHHH 112 (115)
T ss_dssp TTTT-CCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSH-HHHSC-CCC---
T ss_pred HHcC-CCCcccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CcCCc-cccccc
Confidence 9998 889999999999999999999999999999999999 99998 888874
|
| >2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A | Back alignment and structure |
|---|
Probab=99.67 E-value=1.7e-16 Score=122.52 Aligned_cols=96 Identities=18% Similarity=0.160 Sum_probs=82.9
Q ss_pred cccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHH
Q 039483 70 RQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMA 149 (360)
Q Consensus 70 ~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A 149 (360)
+... ...|.+|.|| ||+|+..|+.+++++|++.|++++. +|..|. ||||+|
T Consensus 14 ~~~~-~~~~~~g~t~-L~~A~~~g~~~~v~~Ll~~g~~i~~------------------~d~~g~---------tpLh~A 64 (110)
T 2zgd_A 14 VPRG-SHMGSDLGKK-LLEAARAGQDDEVRILMANGADVAA------------------KDKNGS---------TPLHLA 64 (110)
T ss_dssp ---------CCHHHH-HHHHHHHTCHHHHHHHHHTTCCTTC------------------CCTTCC---------CHHHHH
T ss_pred CCcc-cccCCccchH-HHHHHHcCCHHHHHHHHHcCCCCCc------------------cCCCCC---------CHHHHH
Confidence 4455 7788999999 9999999999999999999999988 788885 888888
Q ss_pred HhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHH
Q 039483 150 AEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQL 208 (360)
Q Consensus 150 ~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~L 208 (360)
+..|+ .+++++|+++|++++. +|..|.||||+|+..|+. +++++|
T Consensus 65 ~~~~~-~~~v~~Ll~~ga~~~~---~d~~g~tpl~~A~~~~~~----------~~~~~L 109 (110)
T 2zgd_A 65 ARNGH-LEVVKLLLEAGADVXA---QDKFGKTAFDISIDNGNE----------DLAEIL 109 (110)
T ss_dssp HHTTC-HHHHHHHHHTTCCTTC---CCTTSCCHHHHHHHHTCH----------HHHHHH
T ss_pred HHcCC-HHHHHHHHHcCCCccc---cccCCCcHHHHHHHcCCH----------HHHHHh
Confidence 99999 9999999999999999 999999999999999999 999876
|
| >2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A | Back alignment and structure |
|---|
Probab=99.63 E-value=8.9e-16 Score=118.42 Aligned_cols=85 Identities=19% Similarity=0.136 Sum_probs=77.4
Q ss_pred cCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCC
Q 039483 143 KIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQC 222 (360)
Q Consensus 143 ~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~ 222 (360)
.||||+|+..|+ .+++++|++.|++++. +|..|.||||+|+..|+. +++++|++.+ .+++.+|..
T Consensus 25 ~t~L~~A~~~g~-~~~v~~Ll~~g~~i~~---~d~~g~tpLh~A~~~~~~----------~~v~~Ll~~g-a~~~~~d~~ 89 (110)
T 2zgd_A 25 GKKLLEAARAGQ-DDEVRILMANGADVAA---KDKNGSTPLHLAARNGHL----------EVVKLLLEAG-ADVXAQDKF 89 (110)
T ss_dssp HHHHHHHHHHTC-HHHHHHHHHTTCCTTC---CCTTCCCHHHHHHHTTCH----------HHHHHHHHTT-CCTTCCCTT
T ss_pred chHHHHHHHcCC-HHHHHHHHHcCCCCCc---cCCCCCCHHHHHHHcCCH----------HHHHHHHHcC-CCccccccC
Confidence 478888888999 9999999999999998 899999999999999999 9999999998 788899999
Q ss_pred CChHHHHHHHcCCHHHHHHH
Q 039483 223 WWTPIHYAAYHRNYLILKLI 242 (360)
Q Consensus 223 g~t~Lh~A~~~~~~~~v~~L 242 (360)
|+||||+|+..|+.+++++|
T Consensus 90 g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 90 GKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp SCCHHHHHHHHTCHHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHh
Confidence 99999999999999999876
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 360 | ||||
| d1wdya_ | 285 | d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas | 5e-06 | |
| d1wdya_ | 285 | d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas | 0.004 | |
| d1sw6a_ | 301 | d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker | 4e-05 | |
| d1n11a_ | 408 | d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta | 1e-04 | |
| d1n11a_ | 408 | d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta | 0.001 | |
| d1n11a_ | 408 | d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta | 0.004 | |
| d1ihba_ | 156 | d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens | 5e-04 | |
| d2ajaa1 | 346 | a.118.24.1 (A:3-348) Hypothetical protein LPG2416 | 0.004 |
| >d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: RNase L, 2-5a-dependent ribonuclease species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.3 bits (106), Expect = 5e-06
Identities = 29/234 (12%), Positives = 65/234 (27%), Gaps = 18/234 (7%)
Query: 87 HVAAKFDHCDIVSVLIERAKLVQHEDEE-------LESGVGASRQMIRMTNKEKHTTLHE 139
A + + D+V L+E V ++EE + + + L +
Sbjct: 10 IKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRK 69
Query: 140 AYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTL 199
P +AA + + K + +A + +
Sbjct: 70 KNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGA 129
Query: 200 SNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKM 259
+ + + + ++ G T + AA + +LK++L D +
Sbjct: 130 NVNLRRKTKEDQERLRKGG-----ATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRN 184
Query: 260 TALHLVHGPKGCQNNMLASSLMDEG------DAKGNTTVHFFAAVHRKEIFDDL 307
+H + + L+D G +G T + + L
Sbjct: 185 ALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRL 238
|
| >d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: RNase L, 2-5a-dependent ribonuclease species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.1 bits (82), Expect = 0.004
Identities = 35/217 (16%), Positives = 63/217 (29%), Gaps = 40/217 (18%)
Query: 87 HVAAKFDHCDIVSVLIERAKLV------QHEDEELESGVGASRQMIRMTNKEKHTTLHEA 140
H A + DIV +L+ L + G+ + + +K +
Sbjct: 44 HNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDF 103
Query: 141 YNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQ------ALHAATM--HIDL 192
Y AA Y + K ER AL A H+++
Sbjct: 104 YGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEV 163
Query: 193 CKF-------------------------NHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPI 227
K + S+ A+ L + + + TP+
Sbjct: 164 LKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPL 223
Query: 228 HYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHL 264
A ++ +++ +L+ + D D K TAL L
Sbjct: 224 ILAVEKKHLGLVQRLLEQEHIEINDTDSDGK-TALLL 259
|
| >d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Swi6 ankyrin-repeat fragment species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 42.3 bits (98), Expect = 4e-05
Identities = 26/200 (13%), Positives = 63/200 (31%), Gaps = 16/200 (8%)
Query: 76 PVTAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHT 135
PV G+T H + ++V L++ + D ES + + + + +
Sbjct: 102 PVDEHGNT-PLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFE 160
Query: 136 TLHEAYNKIPLCMAAEYEHSSHTVV--AILKSCTSVSHIYMKAPMERQALHAATMHIDLC 193
L + + + H ++ + + C++ + Y+ M
Sbjct: 161 ALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGT 220
Query: 194 KFNHTLSNDCA------VQQLFEGKKSMIKGI---DQCWWTPIHYAAYHRNYLILKLILK 244
+ ND + + + K + + D T ++ AA N I+ +L
Sbjct: 221 NEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLD 280
Query: 245 IDRTAAKIADKDRK-MTALH 263
A ++ + +
Sbjct: 281 YG---ADPFIANKSGLRPVD 297
|
| >d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Ankyrin-R species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.5 bits (96), Expect = 1e-04
Identities = 32/220 (14%), Positives = 64/220 (29%), Gaps = 14/220 (6%)
Query: 87 HVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPL 146
H+AA+ H ++ L++ V + ++ R+ + L E L
Sbjct: 38 HMAARAGHTEVAKYLLQNKAKVNAKAKD---DQTPLHCAARIGHTNMVKLLLENNANPNL 94
Query: 147 CMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQ 206
A + + + + T V
Sbjct: 95 ATTAGHTPLHIAA------REGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVA 148
Query: 207 QLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVH 266
+L + + + TP+H A +H N I+KL+ + R + + T LH+
Sbjct: 149 ELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLL--LPRGGSPHSPAWNGYTPLHIAA 206
Query: 267 GPKGCQNNML---ASSLMDEGDAKGNTTVHFFAAVHRKEI 303
+ + +G T +H A E+
Sbjct: 207 KQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEM 246
|
| >d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Ankyrin-R species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.0 bits (87), Expect = 0.001
Identities = 31/203 (15%), Positives = 61/203 (30%), Gaps = 28/203 (13%)
Query: 87 HVAAKFDHCDIVSVLIERAKLVQHEDE---------------ELESGVGASRQMIRMTNK 131
HVA ++ DIV +L+ R E+ + +
Sbjct: 170 HVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESV 229
Query: 132 EKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPME--RQALHAATMH 189
+ T LH A + M A KS + H+ + L +
Sbjct: 230 QGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVM 289
Query: 190 IDLCKFNH-------TLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLI 242
+D + + + + ++ + + ++P+H AA + I+ L+
Sbjct: 290 VDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLL 349
Query: 243 LKIDRTAAKIADKDRK-MTALHL 264
LK A + T L +
Sbjct: 350 LKNG---ASPNEVSSDGTTPLAI 369
|
| >d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Ankyrin-R species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.5 bits (83), Expect = 0.004
Identities = 37/258 (14%), Positives = 73/258 (28%), Gaps = 32/258 (12%)
Query: 62 CISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGA 121
+ ++ Q K HVAAK+ + +L+ER + G+
Sbjct: 112 VETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKN---GLTP 168
Query: 122 SRQMIRMTNKEKHTTLHEA---------YNKIPLCMAAEYEHSSHTVVAILKSCTSVSHI 172
+ N + L PL +AA+ +
Sbjct: 169 LHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGG----SA 224
Query: 173 YMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAY 232
++ LH A + L K++ ++ TP+H A
Sbjct: 225 NAESVQGVTPLHLAAQE-----------GHAEMVALLLSKQANGNLGNKSGLTPLHLVAQ 273
Query: 233 HRNYLILKLILKIDRTAAKIADKDRKMTALHLVH---GPKGCQNNMLASSLMDEGDAKGN 289
+ + +++K A T LH+ K + + + ++ G
Sbjct: 274 EGHVPVADVLIK--HGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGY 331
Query: 290 TTVHFFAAVHRKEIFDDL 307
+ +H A +I L
Sbjct: 332 SPLHQAAQQGHTDIVTLL 349
|
| >d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: p18ink4C(ink6) species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.9 bits (86), Expect = 5e-04
Identities = 11/158 (6%), Positives = 36/158 (22%), Gaps = 9/158 (5%)
Query: 87 HVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPL 146
AA + ++ L++ V ++ + + +
Sbjct: 6 ASAAARGDLEQLTSLLQNNVNVNAQNGF---------GRTALQVMKLGNPEIARRLLLRG 56
Query: 147 CMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQ 206
+ + V+ + + + + V+
Sbjct: 57 ANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVE 116
Query: 207 QLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILK 244
L + S + + T A + ++ L+
Sbjct: 117 FLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQA 154
|
| >d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Pseudo ankyrin repeat-like family: Pseudo ankyrin repeat domain: Hypothetical protein LPG2416 species: Legionella pneumophila [TaxId: 446]
Score = 36.4 bits (83), Expect = 0.004
Identities = 19/149 (12%), Positives = 43/149 (28%), Gaps = 14/149 (9%)
Query: 126 IRMTNKEKHTTLHEA--YNKIPLCMAAEYEHSSHTVVAILKSCTSV-SHIYMKAPMERQA 182
K+ + H+ +++ +AA SS + L + + + QA
Sbjct: 72 YNRNAKQLWSDAHKKGIKSEVICFVAAITGCSS--ALDTLCLLLTSDEIVKVIQAENYQA 129
Query: 183 LHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLI 242
A + H + ++ I + AA + + +L +
Sbjct: 130 FRLA------AENGHL---HVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRL 180
Query: 243 LKIDRTAAKIADKDRKMTALHLVHGPKGC 271
++ T A + A +G
Sbjct: 181 CELAPTEATAMIQAENYYAFRWAAVGRGH 209
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 360 | |||
| d1n11a_ | 408 | Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1uoha_ | 223 | 26S proteasome non-ATPase regulatory subunit 10, g | 100.0 | |
| d1oy3d_ | 255 | Transcription factor inhibitor I-kappa-B-beta, IKB | 100.0 | |
| d1ixva_ | 229 | 26S proteasome non-ATPase regulatory subunit 10, g | 100.0 | |
| d1oy3d_ | 255 | Transcription factor inhibitor I-kappa-B-beta, IKB | 99.98 | |
| d1s70b_ | 291 | Myosin phosphatase targeting subunit 1, MYPT1 {Chi | 99.97 | |
| d1wdya_ | 285 | RNase L, 2-5a-dependent ribonuclease {Human (Homo | 99.97 | |
| d2fo1e1 | 277 | Lin-12 {Caenorhabditis elegans [TaxId: 6239]} | 99.97 | |
| d1uoha_ | 223 | 26S proteasome non-ATPase regulatory subunit 10, g | 99.97 | |
| d1n11a_ | 408 | Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} | 99.97 | |
| d1k1aa_ | 228 | bcl-3 {Human (Homo sapiens) [TaxId: 9606]} | 99.96 | |
| d1iknd_ | 221 | I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606 | 99.95 | |
| d1iknd_ | 221 | I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606 | 99.95 | |
| d1ot8a_ | 209 | Neurogenic locus notch receptor domain {Fruit fly | 99.95 | |
| d1ixva_ | 229 | 26S proteasome non-ATPase regulatory subunit 10, g | 99.94 | |
| d1ihba_ | 156 | p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606] | 99.94 | |
| d1bd8a_ | 156 | Cell cycle inhibitor p19ink4D {Human (Homo sapiens | 99.93 | |
| d1wdya_ | 285 | RNase L, 2-5a-dependent ribonuclease {Human (Homo | 99.93 | |
| d1s70b_ | 291 | Myosin phosphatase targeting subunit 1, MYPT1 {Chi | 99.93 | |
| d2fo1e1 | 277 | Lin-12 {Caenorhabditis elegans [TaxId: 6239]} | 99.92 | |
| d1bd8a_ | 156 | Cell cycle inhibitor p19ink4D {Human (Homo sapiens | 99.92 | |
| d1ihba_ | 156 | p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606] | 99.92 | |
| d1awcb_ | 153 | GA bindinig protein (GABP) beta 1 {Mouse (Mus musc | 99.91 | |
| d1awcb_ | 153 | GA bindinig protein (GABP) beta 1 {Mouse (Mus musc | 99.91 | |
| d2ajaa1 | 346 | Hypothetical protein LPG2416 {Legionella pneumophi | 99.91 | |
| d1ot8a_ | 209 | Neurogenic locus notch receptor domain {Fruit fly | 99.91 | |
| d1k1aa_ | 228 | bcl-3 {Human (Homo sapiens) [TaxId: 9606]} | 99.89 | |
| d1sw6a_ | 301 | Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch | 99.89 | |
| d1myoa_ | 118 | Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116] | 99.89 | |
| d1bi7b_ | 125 | Cell cycle inhibitor p16ink4A {Human (Homo sapiens | 99.89 | |
| d1bi7b_ | 125 | Cell cycle inhibitor p16ink4A {Human (Homo sapiens | 99.86 | |
| d1myoa_ | 118 | Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116] | 99.86 | |
| d1ycsb1 | 130 | 53BP2 {Human (Homo sapiens) [TaxId: 9606]} | 99.84 | |
| d1ycsb1 | 130 | 53BP2 {Human (Homo sapiens) [TaxId: 9606]} | 99.84 | |
| d1sw6a_ | 301 | Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch | 99.83 | |
| d2ajaa1 | 346 | Hypothetical protein LPG2416 {Legionella pneumophi | 99.82 | |
| d1dcqa1 | 154 | Pyk2-associated protein beta {Mouse (Mus musculus) | 99.82 | |
| d1dcqa1 | 154 | Pyk2-associated protein beta {Mouse (Mus musculus) | 99.81 |
| >d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Ankyrin-R species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.5e-36 Score=282.24 Aligned_cols=152 Identities=18% Similarity=0.186 Sum_probs=133.9
Q ss_pred cCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCC
Q 039483 143 KIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQC 222 (360)
Q Consensus 143 ~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~ 222 (360)
.|||+.|+..++ .++++.++..+...+. .+..|.||++.|+..++. +++++|++.+ .+++..+..
T Consensus 232 ~t~l~~a~~~~~-~~~~~~~~~~~~~~~~---~~~~g~~~l~~a~~~~~~----------~i~~~Ll~~g-~~~~~~~~~ 296 (408)
T d1n11a_ 232 VTPLHLAAQEGH-AEMVALLLSKQANGNL---GNKSGLTPLHLVAQEGHV----------PVADVLIKHG-VMVDATTRM 296 (408)
T ss_dssp CCHHHHHHHTTC-HHHHHHHHTTTCCTTC---CCTTCCCHHHHHHHHTCH----------HHHHHHHHHT-CCTTCCCSS
T ss_pred CCHHHHHHHhCc-HhHhhhhhcccccccc---ccCCCCChhhhhhhcCcH----------HHHHHHHHCC-Ccccccccc
Confidence 567777777777 7777777777777776 777788888888888888 9999999988 778888999
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-ccccc--cccCccCCCCCCcHHHHHHHcC
Q 039483 223 WWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLA--SSLMDEGDAKGNTTVHFFAAVH 299 (360)
Q Consensus 223 g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~--~~~~~~~d~~g~Tpl~~A~~~~ 299 (360)
+.||||.++..++.++++++++.|+++ +.+|. .|+||||+|+..++.+ +++|+ +++++.+|.+|+||||+|++.|
T Consensus 297 ~~t~L~~~~~~~~~~~~~~ll~~g~~i-n~~d~-~G~T~Lh~A~~~g~~~iv~~Ll~~GAd~n~~d~~G~t~L~~A~~~~ 374 (408)
T d1n11a_ 297 GYTPLHVASHYGNIKLVKFLLQHQADV-NAKTK-LGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLG 374 (408)
T ss_dssp CCCHHHHHHHSSCSHHHHHHHHTTCCT-TCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTT
T ss_pred ccccchhhcccCcceeeeeeccccccc-cccCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC
Confidence 999999999999999999999999999 99999 9999999999999999 99998 4999999999999999999999
Q ss_pred CHHHHHHHhhhh
Q 039483 300 RKEIFDDLSGRV 311 (360)
Q Consensus 300 ~~~i~~~l~~~~ 311 (360)
+.++++.|....
T Consensus 375 ~~~iv~~L~~~~ 386 (408)
T d1n11a_ 375 YISVTDVLKVVT 386 (408)
T ss_dssp CHHHHHHHHHHC
T ss_pred CHHHHHHHHHHH
Confidence 999999875543
|
| >d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-35 Score=257.51 Aligned_cols=216 Identities=20% Similarity=0.195 Sum_probs=198.2
Q ss_pred CHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHhc
Q 039483 26 DPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIERA 105 (360)
Q Consensus 26 ~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g 105 (360)
++.|+.+|++|+++.++.++..+ +.++ +.+|..|+|| ||+||..|+.+++++|++.+
T Consensus 4 ~~~~~~~a~~G~~~~v~~~l~~~---------------------~~~~-~~~D~~G~Tp-Lh~Aa~~g~~e~~~~l~~~~ 60 (223)
T d1uoha_ 4 NLMVCNLAYSGKLEELKESILAD---------------------KSLA-TRTDQDSRTA-LHWACSAGHTEIVEFLLQLG 60 (223)
T ss_dssp SSHHHHHHHTTCHHHHHHHHHHC---------------------GGGG-GCCCTTSCCH-HHHHHHHTCHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCHHHHHHHHHhC---------------------CCcC-cCcCCCCCCH-HHHHHHhhhhcccccccccc
Confidence 35789999999999999998742 5667 8999999999 99999999999999999999
Q ss_pred cccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHH
Q 039483 106 KLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHA 185 (360)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~ 185 (360)
.+... .+..+ .++++.++..++ .+++++|+++|++++. +|..|.||||+
T Consensus 61 ~~~~~------------------~~~~~---------~~~~~~~~~~~~-~~i~~~Ll~~~~d~~~---~d~~g~tpL~~ 109 (223)
T d1uoha_ 61 VPVND------------------KDDAG---------WSPLHIAASAGR-DEIVKALLGKGAQVNA---VNQNGCTPLHY 109 (223)
T ss_dssp CCSCC------------------CCTTC---------CCHHHHHHHHTC-HHHHHHHHHTTCCTTC---CCTTCCCHHHH
T ss_pred ccccc------------------ccccc---------cccccccccccc-cchhHHHhccCceeEe---eCCCCCchhhH
Confidence 87766 44454 488888999999 9999999999999999 99999999999
Q ss_pred HHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhh
Q 039483 186 ATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLV 265 (360)
Q Consensus 186 A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A 265 (360)
|+..|+. +++++|++++ .+++..+..|.||||+|+..++.+++++|++.+.++ +.+|. .|+||||+|
T Consensus 110 A~~~~~~----------e~~~~Ll~~g-~d~~~~~~~~~t~L~~a~~~~~~~~~~~L~~~~~~i-~~~d~-~g~TpL~~A 176 (223)
T d1uoha_ 110 AASKNRH----------EIAVMLLEGG-ANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKAST-NIQDT-EGNTPLHLA 176 (223)
T ss_dssp HHHHTCH----------HHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS-CCCCT-TCCCHHHHH
T ss_pred HHHcCCH----------HHHHHHHHCC-CCCCCcCCCCCccchhhhhcCCcchhhhhcccccee-eeccC-CCCceeccc
Confidence 9999999 9999999998 889999999999999999999999999999999999 99999 999999999
Q ss_pred hcCCccc-ccccc--cccCccCCCCCCcHHHHHHHcCCHHHHHHHhh
Q 039483 266 HGPKGCQ-NNMLA--SSLMDEGDAKGNTTVHFFAAVHRKEIFDDLSG 309 (360)
Q Consensus 266 ~~~~~~~-~~~L~--~~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~ 309 (360)
+..++.+ +++|+ +++++.+|.+|+||||+| +.|+.++++.|++
T Consensus 177 a~~g~~~~v~~LL~~Gad~~~~d~~g~tpl~~A-~~~~~~i~~~Ll~ 222 (223)
T d1uoha_ 177 CDEERVEEAKLLVSQGASIYIENKEEKTPLQVA-KGGLGLILKRMVE 222 (223)
T ss_dssp HHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHC-CTTHHHHHHHHHC
T ss_pred cccCcHHHHHHHHHCCCCCCCCCCCCCCHHHHH-HCCCHHHHhcccC
Confidence 9999999 99998 599999999999999998 5799999998864
|
| >d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Transcription factor inhibitor I-kappa-B-beta, IKBB species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=7.2e-34 Score=251.22 Aligned_cols=197 Identities=19% Similarity=0.131 Sum_probs=172.8
Q ss_pred CCCCCCCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCC
Q 039483 75 QPVTAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEH 154 (360)
Q Consensus 75 ~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~ 154 (360)
.-.|.+|.|| ||+||+.|+.+++++|+++|++... ++.+|..|. ||||+|+..|+
T Consensus 3 ~~i~~~G~t~-Lh~A~~~~~~~~v~~Ll~~~a~~~~---------------i~~~~~~g~---------TpL~~A~~~g~ 57 (255)
T d1oy3d_ 3 GYVTEDGDTA-LHLAVIHQHEPFLDFLLGFSAGHEY---------------LDLQNDLGQ---------TALHLAAILGE 57 (255)
T ss_dssp CCCCTTCCCH-HHHHHHTTCHHHHHHHHHHHTTSGG---------------GGCCCTTSC---------CHHHHHHHHTC
T ss_pred ccCCcCCCCH-HHHHHHcCCHHHHHHHHHcCCCccc---------------ccCcCCCCC---------CccchHHhhcc
Confidence 3467899999 9999999999999999999987543 334788885 78888889999
Q ss_pred cHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccc-------------------
Q 039483 155 SSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSM------------------- 215 (360)
Q Consensus 155 ~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~------------------- 215 (360)
.+++++|+++|++++. +|..|.||||+|+..++. ++++.|++.....
T Consensus 58 -~~iv~~Ll~~ga~i~~---~d~~g~tpL~~A~~~~~~----------~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (255)
T d1oy3d_ 58 -ASTVEKLYAAGAGVLV---AERGGHTALHLACRVRAH----------TCACVLLQPRPSHPRDASDTYLTQSQDCTPDT 123 (255)
T ss_dssp -HHHHHHHHHTTCCSSC---CCTTSCCHHHHHTTTTCH----------HHHHHHSSSCCSSCCCC---------------
T ss_pred -cccccccccccccccc---cccccchhhhhhhccCch----------HHHHHHHhhccchhcccchhhhhHHhhhcccc
Confidence 9999999999999999 999999999999999998 8887776543111
Q ss_pred ---------------------------cccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhhhcC
Q 039483 216 ---------------------------IKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGP 268 (360)
Q Consensus 216 ---------------------------i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~ 268 (360)
++.+|..|.||||+|+..++.+++++|++.+++.....+. .|.||||+|+..
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~~-~g~TpL~~A~~~ 202 (255)
T d1oy3d_ 124 SHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPT-CGRTPLHLAVEA 202 (255)
T ss_dssp --------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTT-TCCCHHHHHHHT
T ss_pred hHHHHHHHhhcchhHHHHHHhhhcCcccccccccCcccccccccccccccccchhcccccccccccc-cccccccccccc
Confidence 5567888999999999999999999999999998444566 899999999999
Q ss_pred Cccc-cccccc--ccCccCCCCCCcHHHHHHHcCCHHHHHHHhhhh
Q 039483 269 KGCQ-NNMLAS--SLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGRV 311 (360)
Q Consensus 269 ~~~~-~~~L~~--~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~~ 311 (360)
++.+ +++|++ ++++.+|..|+||||+|++.++.++++.|++..
T Consensus 203 ~~~~~v~~Ll~~gadin~~d~~g~t~L~~A~~~~~~~i~~~Ll~~G 248 (255)
T d1oy3d_ 203 QAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHG 248 (255)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTT
T ss_pred cHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9988 888884 899999999999999999999999999999864
|
| >d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.7e-32 Score=237.09 Aligned_cols=219 Identities=15% Similarity=0.142 Sum_probs=181.1
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHhcc
Q 039483 27 PNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIERAK 106 (360)
Q Consensus 27 ~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~ 106 (360)
+|||+||++|+.+.++.|++.. +.++ +.+|.+|.|| ||+|+..|+.+++++|+++|+
T Consensus 2 ~pLh~A~~~g~~~~v~~Ll~~~---------------------~~~~-~~~d~~G~Tp-L~~A~~~g~~~iv~~Ll~~ga 58 (229)
T d1ixva_ 2 YPLHQACMENEFFKVQELLHSK---------------------PSLL-LQKDQDGRIP-LHWSVSFQAHEITSFLLSKME 58 (229)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHC---------------------GGGT-TCCCTTSCCH-HHHHHHTTCHHHHHHHHTTCT
T ss_pred HhHHHHHHcCCHHHHHHHHHcC---------------------CCcc-cccCCCCCCH-HHHHHHcCCccccchhhhhhc
Confidence 6899999999999999998842 5566 8899999999 999999999999999999999
Q ss_pred ccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHH
Q 039483 107 LVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAA 186 (360)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A 186 (360)
+++..+ ..+..|. +|+|+++..+. .++++.++..+....... .+..+.++++.+
T Consensus 59 ~~~~~~---------------~~~~~~~---------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~ 112 (229)
T d1ixva_ 59 NVNLDD---------------YPDDSGW---------TPFHIACSVGN-LEVVKSLYDRPLKPDLNK-ITNQGVTCLHLA 112 (229)
T ss_dssp TCCGGG---------------CCCTTSC---------CHHHHHHHHTC-HHHHHHHHSSSSCCCTTC-CCTTSCCHHHHH
T ss_pred cccccc---------------ccccccc---------ccccccccccc-cccccccccccccccccc-cccccccccccc
Confidence 887521 2555664 67777777888 888888888876554422 666788999999
Q ss_pred HhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCC-ccccccccCCCCchhhhh
Q 039483 187 TMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDR-TAAKIADKDRKMTALHLV 265 (360)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~-~~~~~~d~~~g~tpLh~A 265 (360)
+..++. ++++.|+..+ ...+..|..|+||||+|+..|+.+++++|++.+. ++ +.+|. .|+||||+|
T Consensus 113 ~~~~~~----------~~~~~l~~~~-~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~i-n~~d~-~g~TpLh~A 179 (229)
T d1ixva_ 113 VGKKWF----------EVSQFLIENG-ASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAV-NWQDK-QGWTPLFHA 179 (229)
T ss_dssp HHTTCH----------HHHHHHHHTT-CCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTTTCCCS-CCCCT-TSCCHHHHH
T ss_pred cccchh----------hhhhhhhhhc-ccccccCCCCCCccchhhhcccccccccccccccccc-ccccc-ccCCchhhh
Confidence 998888 9999998888 6677888889999999999999999999998874 55 88888 899999999
Q ss_pred hcCCccc-ccccc---cccCccCCCCCCcHHHHHHHcCCHHHHHHHhhh
Q 039483 266 HGPKGCQ-NNMLA---SSLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGR 310 (360)
Q Consensus 266 ~~~~~~~-~~~L~---~~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~ 310 (360)
+..++.+ +++|+ +++++.+|.+|+||||+|+ +.++++.|+..
T Consensus 180 ~~~~~~~~v~~Ll~~~gad~~~~d~~g~t~l~~A~---~~~~~~~Ll~~ 225 (229)
T d1ixva_ 180 LAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL---NEQVKKFFLNN 225 (229)
T ss_dssp HHTTCHHHHHHHHHHHCCCSCCCCTTSCCTGGGCS---CHHHHHHHHHH
T ss_pred cccccHHHHHHHHHhcCCCCCCcCCCCCCHHHHHh---hHHHHHHHHHc
Confidence 9988888 88877 3788999999999999887 35677777664
|
| >d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Transcription factor inhibitor I-kappa-B-beta, IKBB species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.98 E-value=8.6e-32 Score=237.74 Aligned_cols=192 Identities=19% Similarity=0.138 Sum_probs=160.4
Q ss_pred CCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHH
Q 039483 23 PQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLI 102 (360)
Q Consensus 23 ~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll 102 (360)
..+.||||.||+.|+.++++.|++.+.+ ...+ +.+|..|+|| ||+||..|+.+++++|+
T Consensus 7 ~~G~t~Lh~A~~~~~~~~v~~Ll~~~a~-------------------~~~i-~~~~~~g~Tp-L~~A~~~g~~~iv~~Ll 65 (255)
T d1oy3d_ 7 EDGDTALHLAVIHQHEPFLDFLLGFSAG-------------------HEYL-DLQNDLGQTA-LHLAAILGEASTVEKLY 65 (255)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHHHTT-------------------SGGG-GCCCTTSCCH-HHHHHHHTCHHHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHHcCCC-------------------cccc-cCcCCCCCCc-cchHHhhcccccccccc
Confidence 3457999999999999999999984322 3345 7889999999 99999999999999999
Q ss_pred HhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhh-----------------
Q 039483 103 ERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKS----------------- 165 (360)
Q Consensus 103 ~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~----------------- 165 (360)
++|++++. +|..|.||||+|+ ..++ .++++.|++.
T Consensus 66 ~~ga~i~~------------------~d~~g~tpL~~A~---------~~~~-~~~~~~Ll~~~~~~~~~~~~~~~~~~~ 117 (255)
T d1oy3d_ 66 AAGAGVLV------------------AERGGHTALHLAC---------RVRA-HTCACVLLQPRPSHPRDASDTYLTQSQ 117 (255)
T ss_dssp HTTCCSSC------------------CCTTSCCHHHHHT---------TTTC-HHHHHHHSSSCCSSCCCC---------
T ss_pred cccccccc------------------cccccchhhhhhh---------ccCc-hHHHHHHHhhccchhcccchhhhhHHh
Confidence 99999998 8889876666555 3444 4444444332
Q ss_pred ------------------------------CCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccc
Q 039483 166 ------------------------------CTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSM 215 (360)
Q Consensus 166 ------------------------------g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~ 215 (360)
+..++. ++..|.||||+|+..++. +++++|++.+...
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~---~d~~g~TpLh~A~~~~~~----------~~v~~Ll~~~~~~ 184 (255)
T d1oy3d_ 118 DCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEA---ENYDGHTPLHVAVIHKDA----------EMVRLLRDAGADL 184 (255)
T ss_dssp --------------------------CCCGGGGTTC---CCTTSCCHHHHHHHTTCH----------HHHHHHHHHTCCT
T ss_pred hhcccchHHHHHHHhhcchhHHHHHHhhhcCccccc---ccccCccccccccccccc----------ccccchhcccccc
Confidence 233445 788899999999999999 9999999998444
Q ss_pred cccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-cccccc
Q 039483 216 IKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLAS 278 (360)
Q Consensus 216 i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~~ 278 (360)
....+..|.||||+|+..|+.+++++|+++|+++ +.+|. .|+||||+|+..++.+ +++|+.
T Consensus 185 ~~~~~~~g~TpL~~A~~~~~~~~v~~Ll~~gadi-n~~d~-~g~t~L~~A~~~~~~~i~~~Ll~ 246 (255)
T d1oy3d_ 185 NKPEPTCGRTPLHLAVEAQAASVLELLLKAGADP-TARMY-GGRTPLGSALLRPNPILARLLRA 246 (255)
T ss_dssp TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-TSCCHHHHHHTSSCHHHHHHHHH
T ss_pred cccccccccccccccccccHHHHHHHHHHCCCCC-CCCCC-CCCCHHHHHHHCCCHHHHHHHHH
Confidence 4456789999999999999999999999999999 99999 9999999999999999 999985
|
| >d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Myosin phosphatase targeting subunit 1, MYPT1 species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.97 E-value=1.6e-31 Score=240.62 Aligned_cols=213 Identities=18% Similarity=0.144 Sum_probs=186.8
Q ss_pred CHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHhc
Q 039483 26 DPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIERA 105 (360)
Q Consensus 26 ~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g 105 (360)
.++|+.||+.|+++.|+.|++. +.++ +..|.+|.|| ||+|+..|+.++|++|+++|
T Consensus 41 ~t~l~~A~~~G~~~~v~~Ll~~----------------------Gadv-n~~d~~G~T~-L~~A~~~g~~eiv~~Ll~~~ 96 (291)
T d1s70b_ 41 GAVFLAACSSGDTEEVLRLLER----------------------GADI-NYANVDGLTA-LHQACIDDNVDMVKFLVENG 96 (291)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHH----------------------CCCT-TCBCTTCCBH-HHHHHHTTCHHHHHHHHHTT
T ss_pred chHHHHHHHcCCHHHHHHHHHC----------------------CCCC-CccCCCCCcH-HHHHHhcCCceeeeeecccc
Confidence 4889999999999999999984 7778 9999999999 99999999999999999999
Q ss_pred cccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHH
Q 039483 106 KLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHA 185 (360)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~ 185 (360)
++... .+..+ .+||+.++..++ .++++.|+++|..... .+..+.+++++
T Consensus 97 ~~~~~------------------~~~~~---------~~~L~~a~~~~~-~~~~~~l~~~~~~~~~---~~~~~~~~~~~ 145 (291)
T d1s70b_ 97 ANINQ------------------PDNEG---------WIPLHAAASCGY-LDIAEYLISQGAHVGA---VNSEGDTPLDI 145 (291)
T ss_dssp CCTTC------------------CCTTS---------CCHHHHHHHHTC-HHHHHHHHHTTCCTTC---CCTTSCCHHHH
T ss_pred ccccc------------------ccccc---------cccccccccccc-cchhhcccccCccccc---ccccCcccccc
Confidence 88776 55555 488888899999 9999999999999888 99999999999
Q ss_pred HHhcCCcccccccCChHHHHHHHHhcCccc--------------------------cccccCCCChHHHHHHHcCCHHHH
Q 039483 186 ATMHIDLCKFNHTLSNDCAVQQLFEGKKSM--------------------------IKGIDQCWWTPIHYAAYHRNYLIL 239 (360)
Q Consensus 186 A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~--------------------------i~~~d~~g~t~Lh~A~~~~~~~~v 239 (360)
|+..+.. +.++.++...... ....+..|.||||.|+..|+.+++
T Consensus 146 a~~~~~~----------~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~ 215 (291)
T d1s70b_ 146 AEEEAME----------ELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVL 215 (291)
T ss_dssp CCSHHHH----------HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHH
T ss_pred ccccccc----------hhccccccccccccccccccccccccccchhhhcccccccccccCCCCChhhHHHHcCChhhh
Confidence 9998888 7777777543122 334567899999999999999999
Q ss_pred HHHHhcCCccccccccCCCCchhhhhhcCCccc-ccccc--cccCccCCCCCCcHHHHHHHcCCHHHHHHHhh
Q 039483 240 KLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLA--SSLMDEGDAKGNTTVHFFAAVHRKEIFDDLSG 309 (360)
Q Consensus 240 ~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~--~~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~ 309 (360)
++|++.|+++ +.++. .|+||||+|+..++.+ +++|+ +++++.+|..|+||||+|++ ++++.|.+
T Consensus 216 ~~Ll~~g~di-n~~~~-~g~TpL~~A~~~g~~~iv~lLl~~Gadv~~~d~~G~TaL~~A~e----~~~~~L~~ 282 (291)
T d1s70b_ 216 KLLIQARYDV-NIKDY-DGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADE----DILGYLEE 282 (291)
T ss_dssp HHHHTTTCCT-TCCCT-TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCS----GGGHHHHH
T ss_pred cccccceecc-ccccc-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH----HHHHHHHH
Confidence 9999999999 99999 9999999999999999 99998 48999999999999999975 45554444
|
| >d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: RNase L, 2-5a-dependent ribonuclease species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=9.7e-30 Score=227.69 Aligned_cols=231 Identities=17% Similarity=0.116 Sum_probs=196.6
Q ss_pred CHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCC-CCCCChHHHHHHhcCCHHHHHHHHHh
Q 039483 26 DPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVT-AKGDTRSRHVAAKFDHCDIVSVLIER 104 (360)
Q Consensus 26 ~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~-~~g~tp~Lh~A~~~g~~~~v~~Ll~~ 104 (360)
++.||.|++.|++++++.|++. +.++ +.++ ..|.|| ||+|+..|+.+++++|++.
T Consensus 6 ~~~L~~Ai~~~~~e~vk~Ll~~----------------------G~di-n~~~~~~g~tp-L~~A~~~~~~eiv~~L~~~ 61 (285)
T d1wdya_ 6 NHLLIKAVQNEDVDLVQQLLEG----------------------GANV-NFQEEEGGWTP-LHNAVQMSREDIVELLLRH 61 (285)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHT----------------------TCCT-TCCCTTTCCCH-HHHHHHTTCHHHHHHHHHT
T ss_pred cHHHHHHHHcCCHHHHHHHHHC----------------------CCCc-CccCCCCCCCH-HHHHHHcCCHHHhhhhccc
Confidence 4789999999999999999984 5666 5554 569999 9999999999999999999
Q ss_pred ccccCcccccccccchhhHHHhhcccCCCCchHHHhhh------------------------cCHHHHHHhcCCcHHHHH
Q 039483 105 AKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYN------------------------KIPLCMAAEYEHSSHTVV 160 (360)
Q Consensus 105 g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~------------------------~t~L~~A~~~g~~~~~~~ 160 (360)
+..... .+..+.+|.+++.. .++++.|+..++ ...++
T Consensus 62 ~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~-~~~~~ 122 (285)
T d1wdya_ 62 GADPVL------------------RKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGK-VKALK 122 (285)
T ss_dssp TCCTTC------------------CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTC-HHHHH
T ss_pred cccccc------------------cccccchhhHHHhhcCCccccchhhhhcccccccccCCCchhHHHHHhcc-hhhhh
Confidence 988877 55556666665551 689999999999 99999
Q ss_pred HHHhhCCCCCcc-------ccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHc
Q 039483 161 AILKSCTSVSHI-------YMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYH 233 (360)
Q Consensus 161 ~Ll~~g~~~~~~-------~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~ 233 (360)
.++....+++.. ...+..|.||||+|+..|+. +++++|++....+++..+..|.++++.+...
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~----------~~~~~Ll~~~~~~i~~~~~~~~~~~~~~~~~ 192 (285)
T d1wdya_ 123 FLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHV----------EVLKILLDEMGADVNACDNMGRNALIHALLS 192 (285)
T ss_dssp HHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCH----------HHHHHHHHTSCCCTTCCCTTSCCHHHHHHHC
T ss_pred hhhhhcccccccccchhhhhhhcccCchHHHHHHHcCCH----------HHHHHHHhccCCCcccccCCCCccccccccc
Confidence 999876654430 01345689999999999999 9999999876688999999999888876654
Q ss_pred C----CHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-ccccc---cccCccCCCCCCcHHHHHHHcCCHHHHH
Q 039483 234 R----NYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLA---SSLMDEGDAKGNTTVHFFAAVHRKEIFD 305 (360)
Q Consensus 234 ~----~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~---~~~~~~~d~~g~Tpl~~A~~~~~~~i~~ 305 (360)
+ ...++++|+++|+++ +.++. .|.||||.|+..++.+ +++|+ +++++.+|.+|+||||+|+++|+.++++
T Consensus 193 ~~~~~~~~i~~~Li~~ga~~-n~~~~-~g~t~L~~a~~~~~~~~v~~lL~~~g~din~~d~~G~TpL~~A~~~~~~eiv~ 270 (285)
T d1wdya_ 193 SDDSDVEAITHLLLDHGADV-NVRGE-RGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAE 270 (285)
T ss_dssp SCTTTHHHHHHHHHHTTCCS-SCCCT-TSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred ccchHHHHHHHHHHHCCCCC-CccCC-CCCCccchhhhcCcHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHH
Confidence 3 357999999999999 99999 9999999999999998 88887 3899999999999999999999999999
Q ss_pred HHhhhh
Q 039483 306 DLSGRV 311 (360)
Q Consensus 306 ~l~~~~ 311 (360)
.|++..
T Consensus 271 ~Ll~~G 276 (285)
T d1wdya_ 271 LLCKRG 276 (285)
T ss_dssp HHHHHS
T ss_pred HHHHCC
Confidence 998874
|
| >d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Lin-12 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.97 E-value=9.9e-31 Score=233.24 Aligned_cols=233 Identities=16% Similarity=0.106 Sum_probs=190.8
Q ss_pred CCCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHH
Q 039483 22 QPQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVL 101 (360)
Q Consensus 22 ~~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~L 101 (360)
..++.||||.||..|+.++++.|+....... ... |.++ +.+|.+|+|| ||+|+..|+.++|++|
T Consensus 30 ~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~-------------l~~-Gadv-n~~d~~G~Tp-Lh~A~~~g~~~iv~~L 93 (277)
T d2fo1e1 30 PRHNRTVLHWIASNSSAEKSEDLIVHEAKEC-------------IAA-GADV-NAMDCDENTP-LMLAVLARRRRLVAYL 93 (277)
T ss_dssp CSSCCCHHHHHHCTTCCSCCTTHHHHHHHHH-------------HHT-CCCT-TCCCTTSCCH-HHHHHHHTCHHHHHHH
T ss_pred CCCCccHHHHHHHcCCHHHHHHHHhcchhHH-------------HHc-CCCc-cccCCCCCee-eccccccccccccccc
Confidence 3468899999999999999999988543321 122 7899 9999999999 9999999999999999
Q ss_pred HHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhC---CCCCccccCCCC
Q 039483 102 IERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSC---TSVSHIYMKAPM 178 (360)
Q Consensus 102 l~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g---~~~~~~~~~d~~ 178 (360)
+++|++++. +|.+|. |||+.|+..++ .++++.+...+ ..++. .+..
T Consensus 94 l~~Gad~n~------------------~~~~g~---------t~l~~a~~~~~-~~~~~~l~~~~~~~~~~~~---~~~~ 142 (277)
T d2fo1e1 94 MKAGADPTI------------------YNKSER---------SALHQAAANRD-FGMMVYMLNSTKLKGDIEE---LDRN 142 (277)
T ss_dssp HHTTCCSCC------------------CCTTCC---------CHHHHHHHTTC-HHHHHHHTTSHHHHHTTSC---CCTT
T ss_pred ccccccccc------------------cccccc---------ccccchhhhcc-hhhhhhhhhcccccccccc---cccc
Confidence 999999988 788885 77777888888 88888887754 34555 7888
Q ss_pred CCcHHHHHHhcCCcccccccCChHHHHHHHHhcC-------ccccccccCCCChHHHHHHHcCCHHHHHHHH-hcCCccc
Q 039483 179 ERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGK-------KSMIKGIDQCWWTPIHYAAYHRNYLILKLIL-KIDRTAA 250 (360)
Q Consensus 179 g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~-------~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll-~~g~~~~ 250 (360)
+.++.+.+...+.. .....+..+.... ....+..+..|+||||+++..++.+++++++ ..+.+.
T Consensus 143 ~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~~~~~~~~~~~~~~l~~~~~~~- 214 (277)
T d2fo1e1 143 GMTALMIVAHNEGR-------DQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNK- 214 (277)
T ss_dssp SCCHHHHHHHSCST-------THHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCT-
T ss_pred cchhHHHHHhcccc-------cccccccccccccccccccccccccccccCCCCccccccccccccccccccccccccc-
Confidence 89999998887765 1112334443332 1123445678999999999999999998866 667777
Q ss_pred cccccCCCCchhhhhhcCCccc-ccccc--cccCccCCCCCCcHHHHHHHcCCHHHHHHHhhh
Q 039483 251 KIADKDRKMTALHLVHGPKGCQ-NNMLA--SSLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGR 310 (360)
Q Consensus 251 ~~~d~~~g~tpLh~A~~~~~~~-~~~L~--~~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~ 310 (360)
+.+|. .|+||||+|+..++.+ +++|+ +++++.+|.+|+||||+|++.|+.++++.|.+.
T Consensus 215 ~~~d~-~g~tpL~~A~~~g~~~iv~~Ll~~gadin~~d~~G~T~L~~A~~~~~~~iv~lL~~c 276 (277)
T d2fo1e1 215 DKQDE-DGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRC 276 (277)
T ss_dssp TCCCT-TCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTT
T ss_pred cccCC-CCCCHHHHHHHcCCHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHh
Confidence 89999 9999999999999999 99988 499999999999999999999999999998864
|
| >d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=4.1e-30 Score=223.12 Aligned_cols=188 Identities=20% Similarity=0.178 Sum_probs=168.1
Q ss_pred CCCCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHH
Q 039483 21 SQPQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSV 100 (360)
Q Consensus 21 ~~~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~ 100 (360)
....++||||.||..|+.++++.+++. +... ...+..+.++ ++.|+..|+.+++++
T Consensus 33 ~D~~G~TpLh~Aa~~g~~e~~~~l~~~----------------------~~~~-~~~~~~~~~~-~~~~~~~~~~~i~~~ 88 (223)
T d1uoha_ 33 TDQDSRTALHWACSAGHTEIVEFLLQL----------------------GVPV-NDKDDAGWSP-LHIAASAGRDEIVKA 88 (223)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHH----------------------TCCS-CCCCTTCCCH-HHHHHHHTCHHHHHH
T ss_pred cCCCCCCHHHHHHHhhhhccccccccc----------------------cccc-cccccccccc-ccccccccccchhHH
Confidence 345678999999999999999999874 3333 5566778999 999999999999999
Q ss_pred HHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCC
Q 039483 101 LIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMER 180 (360)
Q Consensus 101 Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~ 180 (360)
|+++|++++. .|..|. ||||+|+..|+ .+++++|+++|++++. ++..|.
T Consensus 89 Ll~~~~d~~~------------------~d~~g~---------tpL~~A~~~~~-~e~~~~Ll~~g~d~~~---~~~~~~ 137 (223)
T d1uoha_ 89 LLGKGAQVNA------------------VNQNGC---------TPLHYAASKNR-HEIAVMLLEGGANPDA---KDHYEA 137 (223)
T ss_dssp HHHTTCCTTC------------------CCTTCC---------CHHHHHHHHTC-HHHHHHHHHTTCCTTC---CCTTSC
T ss_pred HhccCceeEe------------------eCCCCC---------chhhHHHHcCC-HHHHHHHHHCCCCCCC---cCCCCC
Confidence 9999999887 788885 78888899999 9999999999999998 999999
Q ss_pred cHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCc
Q 039483 181 QALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMT 260 (360)
Q Consensus 181 t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~t 260 (360)
||||+|+..++. +++++|+..+ .+++..|..|+||||+|+..|+.+++++|++.|+++ +.+|. .|+|
T Consensus 138 t~L~~a~~~~~~----------~~~~~L~~~~-~~i~~~d~~g~TpL~~Aa~~g~~~~v~~LL~~Gad~-~~~d~-~g~t 204 (223)
T d1uoha_ 138 TAMHRAAAKGNL----------KMIHILLYYK-ASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASI-YIENK-EEKT 204 (223)
T ss_dssp CHHHHHHHTTCH----------HHHHHHHHTT-CCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-CCCCT-TSCC
T ss_pred ccchhhhhcCCc----------chhhhhcccc-ceeeeccCCCCceeccccccCcHHHHHHHHHCCCCC-CCCCC-CCCC
Confidence 999999999999 9999999988 789999999999999999999999999999999999 99999 9999
Q ss_pred hhhhhhcCCccc-ccccc
Q 039483 261 ALHLVHGPKGCQ-NNMLA 277 (360)
Q Consensus 261 pLh~A~~~~~~~-~~~L~ 277 (360)
|||+|. .++.+ ++.|+
T Consensus 205 pl~~A~-~~~~~i~~~Ll 221 (223)
T d1uoha_ 205 PLQVAK-GGLGLILKRMV 221 (223)
T ss_dssp HHHHCC-TTHHHHHHHHH
T ss_pred HHHHHH-CCCHHHHhccc
Confidence 999984 45555 55554
|
| >d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Ankyrin-R species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=2.9e-30 Score=242.77 Aligned_cols=197 Identities=19% Similarity=0.191 Sum_probs=175.6
Q ss_pred ccccc-ccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhh---------HHH----
Q 039483 60 QSCIS-TSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGAS---------RQM---- 125 (360)
Q Consensus 60 ~~~v~-l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~---------~~~---- 125 (360)
.++++ +.+. +..+ +..+.+|.+| ||+|+..|+.+++++|+.+|++++..+..+.++.+.. ..+
T Consensus 145 ~~~v~~ll~~-~~~~-~~~~~~~~~~-L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~ 221 (408)
T d1n11a_ 145 VRVAELLLER-DAHP-NAAGKNGLTP-LHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYG 221 (408)
T ss_dssp HHHHHHHHHT-TCCT-TCCCSSCCCH-HHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHHHHc-CCCC-CcCCCcCchH-HHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcchhhhccchhhhhhhhhhcc
Confidence 34555 6666 8888 8899999999 9999999999999999999999998888877774332 111
Q ss_pred --hhcccCCCCchHHHhh-h-----------------------cCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCC
Q 039483 126 --IRMTNKEKHTTLHEAY-N-----------------------KIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPME 179 (360)
Q Consensus 126 --l~~~d~~g~t~Lh~a~-~-----------------------~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g 179 (360)
....+..|.||||+|+ + .|||+.|+..++ .+++++|+++|++++. .+..+
T Consensus 222 ~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~-~~i~~~Ll~~g~~~~~---~~~~~ 297 (408)
T d1n11a_ 222 GSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGH-VPVADVLIKHGVMVDA---TTRMG 297 (408)
T ss_dssp CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTC-HHHHHHHHHHTCCTTC---CCSSC
T ss_pred ccccccCCCCCCHHHHHHHhCcHhHhhhhhccccccccccCCCCChhhhhhhcCc-HHHHHHHHHCCCcccc---ccccc
Confidence 3456778999999998 2 789999999999 9999999999999999 88999
Q ss_pred CcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCC
Q 039483 180 RQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKM 259 (360)
Q Consensus 180 ~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~ 259 (360)
.||||.++..++. ++++.+++.+ .+++.+|..|+||||+|+++|+.+++++|+++|+++ +.+|. +|+
T Consensus 298 ~t~L~~~~~~~~~----------~~~~~ll~~g-~~in~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~GAd~-n~~d~-~G~ 364 (408)
T d1n11a_ 298 YTPLHVASHYGNI----------KLVKFLLQHQ-ADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASP-NEVSS-DGT 364 (408)
T ss_dssp CCHHHHHHHSSCS----------HHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS-CCCCS-SSC
T ss_pred cccchhhcccCcc----------eeeeeecccc-ccccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCC-CCC
Confidence 9999999999999 9999999998 889999999999999999999999999999999999 99999 999
Q ss_pred chhhhhhcCCccc-cccc
Q 039483 260 TALHLVHGPKGCQ-NNML 276 (360)
Q Consensus 260 tpLh~A~~~~~~~-~~~L 276 (360)
||||+|+..++.+ +++|
T Consensus 365 t~L~~A~~~~~~~iv~~L 382 (408)
T d1n11a_ 365 TPLAIAKRLGYISVTDVL 382 (408)
T ss_dssp CHHHHHHHTTCHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHH
Confidence 9999999999988 6655
|
| >d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: bcl-3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=3.6e-29 Score=214.29 Aligned_cols=221 Identities=15% Similarity=0.099 Sum_probs=174.9
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHh
Q 039483 25 IDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIER 104 (360)
Q Consensus 25 ~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~ 104 (360)
+.||||.||..|++++++.|++...+. +.++ +.+|..|.|| ||+|+..|+.+++++|+++
T Consensus 3 G~TpLh~A~~~g~~~~v~~Ll~~~~~~------------------g~~i-n~~d~~g~Tp-L~~A~~~~~~~iv~~Ll~~ 62 (228)
T d1k1aa_ 3 GDTPLHIAVVQGNLPAVHRLVNLFQQG------------------GREL-DIYNNLRQTP-LHLAVITTLPSVVRLLVTA 62 (228)
T ss_dssp TCCHHHHHHHTTCHHHHHHHHHHHHHT------------------TCCS-CCCCTTSCCH-HHHHHHTTCHHHHHHHHHT
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHC------------------CCCC-CccCCCCCcc-ceehhcccccccccccccc
Confidence 679999999999999999999854433 7788 9999999999 9999999999999999999
Q ss_pred ccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCc-cccCCCCCCcHH
Q 039483 105 AKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSH-IYMKAPMERQAL 183 (360)
Q Consensus 105 g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~-~~~~d~~g~t~L 183 (360)
|++.+. .+..|. ++++.|...++ .++++.+......... .........++|
T Consensus 63 ga~~~~------------------~~~~~~---------~~~~~a~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 114 (228)
T d1k1aa_ 63 GASPMA------------------LDRHGQ---------TAAHLACEHRS-PTCLRALLDSAAPGTLDLEARNYDGLTAL 114 (228)
T ss_dssp TCCTTC------------------CCTTSC---------CHHHHHHHTTC-HHHHHHHHHHSCTTSCCTTCCCTTSCCHH
T ss_pred cccccc------------------cccccc---------ccccccccccc-ccchhhhhhcccccccccccccccccccc
Confidence 999887 566664 66677777777 7777777665432211 001445677888
Q ss_pred HHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhh
Q 039483 184 HAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALH 263 (360)
Q Consensus 184 h~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh 263 (360)
+.+...... ...+.|..............+.++|+.|+..+...+++.+++.|.+. +.+|. .|.||||
T Consensus 115 ~~~~~~~~~----------~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~-~~~d~-~g~t~L~ 182 (228)
T d1k1aa_ 115 HVAVNTECQ----------ETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANV-NAQMY-SGSSALH 182 (228)
T ss_dssp HHHHHHTCH----------HHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCBCT-TSCBHHH
T ss_pred ccccccccc----------hhhhhhhccccccccccccchhhHHHHHHHhhhhhhhhhhhhhcccc-ccccc-cCcchHH
Confidence 888887777 77777776664444455667888888888888888888888888888 88888 8888888
Q ss_pred hhhcCCccc-cccccc--ccCccCCCCCCcHHHHHHHcCCHHHHH
Q 039483 264 LVHGPKGCQ-NNMLAS--SLMDEGDAKGNTTVHFFAAVHRKEIFD 305 (360)
Q Consensus 264 ~A~~~~~~~-~~~L~~--~~~~~~d~~g~Tpl~~A~~~~~~~i~~ 305 (360)
+|+..++.+ +++|+. ++++.+|.+|+||||+|+++|+.+++|
T Consensus 183 ~A~~~g~~~~v~~Ll~~Gad~n~~d~~G~TpL~~A~~~~~~divk 227 (228)
T d1k1aa_ 183 SASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILR 227 (228)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCccccC
Confidence 888888888 777773 788888888888888888888887775
|
| >d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: I-kappa-B-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=2.7e-29 Score=217.45 Aligned_cols=191 Identities=18% Similarity=0.126 Sum_probs=132.8
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHh
Q 039483 25 IDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIER 104 (360)
Q Consensus 25 ~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~ 104 (360)
++||||.|+..|+.++++.+++.-... +..+ +.+|..|+|| ||+||..|+.+++++|+++
T Consensus 2 G~t~Lh~A~~~g~~~~~~~li~~~~~~------------------~~~i-n~~d~~g~Tp-Lh~A~~~~~~~iv~~L~~~ 61 (221)
T d1iknd_ 2 GDSFLHLAIIHEEKALTMEVIRQVKGD------------------LAFL-NFQNNLQQTP-LHLAVITNQPEIAEALLGA 61 (221)
T ss_dssp CCCTTHHHHHTTCSSSSSCCCC-----------------------CCCC-CCCCTTCCCH-HHHHHHTTCHHHHHCCCSC
T ss_pred CChHHHHHHHcCCHHHHHHHHHHHHhC------------------CCCc-ccCCCCCCcc-ccccccccccccccccccc
Confidence 457788888888877766665521111 6667 7778888888 8888888888888888888
Q ss_pred ccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCc---cccCCCCCCc
Q 039483 105 AKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSH---IYMKAPMERQ 181 (360)
Q Consensus 105 g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~---~~~~d~~g~t 181 (360)
|++++. .|..|. |||+.++..++ .++++.|+..+..... .......|.|
T Consensus 62 g~d~~~------------------~d~~g~---------t~l~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~t 113 (221)
T d1iknd_ 62 GCDPEL------------------RDFRGN---------TPLHLACEQGC-LASVGVLTQSCTTPHLHSILKATNYNGHT 113 (221)
T ss_dssp CCCSCC------------------CCTTCC---------CHHHHHHHHTC-HHHHHHHHHSTTTTSSSCGGGCCCTTCCC
T ss_pred cccccc------------------cccccc---------ccccccccccc-ccccchhhhhcccccccccccccccccch
Confidence 887776 666664 66667777777 8888888776644221 0113345678
Q ss_pred HHHHHHhcCCcccccccCChHHHHHHHHhcCccccccc-cCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCc
Q 039483 182 ALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGI-DQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMT 260 (360)
Q Consensus 182 ~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~-d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~t 260 (360)
|||.|+..++. +++++|+..+ ..++.. +..|+||||+|+..|+.+++++|+++|+|+ +.+|. +|+|
T Consensus 114 ~l~~a~~~~~~----------~~~~~l~~~~-~~~~~~~~~~G~T~L~~A~~~g~~~~v~~Ll~~gad~-~~~~~-~G~t 180 (221)
T d1iknd_ 114 CLHLASIHGYL----------GIVELLVSLG-ADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADV-NRVTY-QGYS 180 (221)
T ss_dssp HHHHHHHTTCH----------HHHHHHHHHT-CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCS-CCCCT-TCCC
T ss_pred hhhHHhhcCCh----------hheeeecccC-cccccccccCCCCccccccccccHHHHHHHHhcCCcc-cccCC-CCCC
Confidence 88888888888 8888877777 434443 456788888888888888888888888887 77777 7777
Q ss_pred hhhhhhcCCccc-cccc
Q 039483 261 ALHLVHGPKGCQ-NNML 276 (360)
Q Consensus 261 pLh~A~~~~~~~-~~~L 276 (360)
|||+|+..++.+ +++|
T Consensus 181 pl~~A~~~~~~~~~~~l 197 (221)
T d1iknd_ 181 PYQLTWGRPSTRIQQQL 197 (221)
T ss_dssp GGGGCTTSSCHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHH
Confidence 777776666555 4444
|
| >d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: I-kappa-B-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=2.4e-29 Score=217.70 Aligned_cols=189 Identities=17% Similarity=0.178 Sum_probs=162.7
Q ss_pred CCCChHHHHHHhcCCH----HHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCc
Q 039483 80 KGDTRSRHVAAKFDHC----DIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHS 155 (360)
Q Consensus 80 ~g~tp~Lh~A~~~g~~----~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~ 155 (360)
+|+|| ||+|+..|+. ++++++...|++++. +|.+|+ ||||+|+..|+
T Consensus 1 dG~t~-Lh~A~~~g~~~~~~~li~~~~~~~~~in~------------------~d~~g~---------TpLh~A~~~~~- 51 (221)
T d1iknd_ 1 DGDSF-LHLAIIHEEKALTMEVIRQVKGDLAFLNF------------------QNNLQQ---------TPLHLAVITNQ- 51 (221)
T ss_dssp CCCCT-THHHHHTTCSSSSSCCCC-----CCCCCC------------------CCTTCC---------CHHHHHHHTTC-
T ss_pred CCChH-HHHHHHcCCHHHHHHHHHHHHhCCCCccc------------------CCCCCC---------ccccccccccc-
Confidence 59999 9999999995 455677778888887 888886 77788888999
Q ss_pred HHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCc-----cccccccCCCChHHHHH
Q 039483 156 SHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKK-----SMIKGIDQCWWTPIHYA 230 (360)
Q Consensus 156 ~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~-----~~i~~~d~~g~t~Lh~A 230 (360)
.+++++|++.|++++. +|..|.||||+++..++. ++++.|+..+. .........|.||||.|
T Consensus 52 ~~iv~~L~~~g~d~~~---~d~~g~t~l~~~~~~~~~----------~~~~~l~~~~~~~~~~~~~~~~~~~~~t~l~~a 118 (221)
T d1iknd_ 52 PEIAEALLGAGCDPEL---RDFRGNTPLHLACEQGCL----------ASVGVLTQSCTTPHLHSILKATNYNGHTCLHLA 118 (221)
T ss_dssp HHHHHCCCSCCCCSCC---CCTTCCCHHHHHHHHTCH----------HHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHH
T ss_pred cccccccccccccccc---cccccccccccccccccc----------cccchhhhhcccccccccccccccccchhhhHH
Confidence 9999999999999999 999999999999999999 99999998652 12333456789999999
Q ss_pred HHcCCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-cccccc--ccCccCCCCCCcHHHHHHHcCCHHHHHHH
Q 039483 231 AYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLAS--SLMDEGDAKGNTTVHFFAAVHRKEIFDDL 307 (360)
Q Consensus 231 ~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~~--~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l 307 (360)
+..++.+++++|+..|..+ +..+..+|.||||+|+..++.+ +++|++ ++++.+|..|+||||+|+.+++.++++.|
T Consensus 119 ~~~~~~~~~~~l~~~~~~~-~~~~~~~G~T~L~~A~~~g~~~~v~~Ll~~gad~~~~~~~G~tpl~~A~~~~~~~~~~~l 197 (221)
T d1iknd_ 119 SIHGYLGIVELLVSLGADV-NAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQL 197 (221)
T ss_dssp HHTTCHHHHHHHHHHTCCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHH
T ss_pred hhcCChhheeeecccCccc-ccccccCCCCccccccccccHHHHHHHHhcCCcccccCCCCCCHHHHHHHCCCHHHHHHH
Confidence 9999999999999999998 6655438999999999999999 999984 99999999999999999999999999999
Q ss_pred hhhh
Q 039483 308 SGRV 311 (360)
Q Consensus 308 ~~~~ 311 (360)
.+..
T Consensus 198 ~~~~ 201 (221)
T d1iknd_ 198 GQLT 201 (221)
T ss_dssp HTTS
T ss_pred HHcC
Confidence 8874
|
| >d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Neurogenic locus notch receptor domain species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.95 E-value=5.1e-27 Score=200.53 Aligned_cols=189 Identities=17% Similarity=0.174 Sum_probs=161.8
Q ss_pred CC-CCCCCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcC
Q 039483 75 QP-VTAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYE 153 (360)
Q Consensus 75 ~~-~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g 153 (360)
+. .|.+|.|| ||+||..|+.+++++|++.|++++. ++..+. ++++.++..+
T Consensus 16 n~~~d~~G~t~-L~~A~~~g~~e~v~~Ll~~g~~~n~------------------~~~~~~---------~~~~~~~~~~ 67 (209)
T d1ot8a_ 16 NATMDKTGETS-LHLAARFARADAAKRLLDAGADANS------------------QDNTGR---------TPLHAAVAAD 67 (209)
T ss_dssp HHHHHHHCCCH-HHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTSC---------CHHHHHHHTT
T ss_pred CcCcCCCCCCH-HHHHHHcCCHHHHHHHHhhcccccc------------------cccccc---------cccccccccc
Confidence 44 57889999 9999999999999999999999988 677765 6667777777
Q ss_pred CcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHc
Q 039483 154 HSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYH 233 (360)
Q Consensus 154 ~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~ 233 (360)
+ ................ .....+.++.+.+...... ...+.|...+ .+++..+..|+|||+.++.+
T Consensus 68 ~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~----------~~~~~L~~~~-~~~~~~~~~~~t~l~~~~~~ 133 (209)
T d1ot8a_ 68 A-MGVFQILLRNRATNLN--ARMHDGTTPLILAARLAIE----------GMVEDLITAD-ADINAADNSGKTALHWAAAV 133 (209)
T ss_dssp C-HHHHHHHHTCTTCCTT--CCCTTCCCHHHHHHHTTCT----------THHHHHHHTT-CCTTCBCTTSCBHHHHHHHT
T ss_pred c-cccccccccccccccc--cccccccccccccccccch----------hhhhhhhhhc-ccccccCCCCCCcchhhccc
Confidence 7 6666665554433222 1555788888888888888 8889888887 77889999999999999999
Q ss_pred CCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-cccccc--ccCccCCCCCCcHHHHHHHcCCHHHHHHH
Q 039483 234 RNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLAS--SLMDEGDAKGNTTVHFFAAVHRKEIFDDL 307 (360)
Q Consensus 234 ~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~~--~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l 307 (360)
+...+++.+++.+.++ +.+|. .|.||||+|+..++.+ ++.|++ ++++.+|..|+||||+|+++|+.+++++|
T Consensus 134 ~~~~~~~~l~~~~~~~-~~~d~-~g~TpL~~A~~~g~~~~v~~Ll~~gad~n~~d~~g~Tpl~~A~~~~~~~iv~lL 208 (209)
T d1ot8a_ 134 NNTEAVNILLMHHANR-DAQDD-KDETPLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVASERLHHDIVRLL 208 (209)
T ss_dssp TCHHHHHHHHHTTCCT-TCCCT-TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred Ccceeeeeeccccccc-ccccc-ccccccchhccccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHhhc
Confidence 9999999999999999 99999 9999999999999988 888884 88999999999999999999999999976
|
| >d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.94 E-value=2.4e-26 Score=199.12 Aligned_cols=189 Identities=16% Similarity=0.153 Sum_probs=166.7
Q ss_pred CChHHHHHHhcCCHHHHHHHHHhc-cccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHH
Q 039483 82 DTRSRHVAAKFDHCDIVSVLIERA-KLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVV 160 (360)
Q Consensus 82 ~tp~Lh~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~ 160 (360)
.|| ||+||..|+.++++.|++.+ .+++. +|.+|. ||||+|+..|+ .++++
T Consensus 1 n~p-Lh~A~~~g~~~~v~~Ll~~~~~~~~~------------------~d~~G~---------TpL~~A~~~g~-~~iv~ 51 (229)
T d1ixva_ 1 NYP-LHQACMENEFFKVQELLHSKPSLLLQ------------------KDQDGR---------IPLHWSVSFQA-HEITS 51 (229)
T ss_dssp CCH-HHHHHHHTCHHHHHHHHHHCGGGTTC------------------CCTTSC---------CHHHHHHHTTC-HHHHH
T ss_pred CHh-HHHHHHcCCHHHHHHHHHcCCCcccc------------------cCCCCC---------CHHHHHHHcCC-ccccc
Confidence 489 99999999999999998864 55555 888885 78888889999 99999
Q ss_pred HHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCc-cccccccCCCChHHHHHHHcCCHHHH
Q 039483 161 AILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKK-SMIKGIDQCWWTPIHYAAYHRNYLIL 239 (360)
Q Consensus 161 ~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~-~~i~~~d~~g~t~Lh~A~~~~~~~~v 239 (360)
+|+++|++++.....+..|.+|+|+++..+.. ++++.++..+. ......+..+.|+++.++..++.+++
T Consensus 52 ~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 121 (229)
T d1ixva_ 52 FLLSKMENVNLDDYPDDSGWTPFHIACSVGNL----------EVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVS 121 (229)
T ss_dssp HHHTTCTTCCGGGCCCTTSCCHHHHHHHHTCH----------HHHHHHHSSSSCCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred hhhhhhcccccccccccccccccccccccccc----------ccccccccccccccccccccccccccccccccchhhhh
Confidence 99999999876444677899999999999999 99999887762 23455678899999999999999999
Q ss_pred HHHHhcCCccccccccCCCCchhhhhhcCCccc-cccccc---ccCccCCCCCCcHHHHHHHcCCHHHHHHHhhhh
Q 039483 240 KLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLAS---SLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGRV 311 (360)
Q Consensus 240 ~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~~---~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~~ 311 (360)
++|++.|.+. ..++. .|+||||+|+..++.+ ++.|+. .+++.+|..|+||||+|++.|+.++++.|+...
T Consensus 122 ~~l~~~~~~~-~~~~~-~g~t~l~~a~~~~~~~~~~~Ll~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~ 195 (229)
T d1ixva_ 122 QFLIENGASV-RIKDK-FNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKY 195 (229)
T ss_dssp HHHHHTTCCS-CCCCT-TSCCHHHHHHHHTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhhhhhcccc-cccCC-CCCCccchhhhcccccccccccccccccccccccccCCchhhhcccccHHHHHHHHHhc
Confidence 9999999999 89999 9999999999999988 888874 678899999999999999999999999998753
|
| >d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: p18ink4C(ink6) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=4e-26 Score=186.07 Aligned_cols=154 Identities=18% Similarity=0.128 Sum_probs=142.0
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHhcc
Q 039483 27 PNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIERAK 106 (360)
Q Consensus 27 ~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~ 106 (360)
++||.||..|++++++.|++. +.++ +.+|..|.|| ||+|+ .|+.+++++|+++|+
T Consensus 3 ~~Lh~Aa~~g~~~~v~~Ll~~----------------------g~d~-n~~d~~g~Tp-L~~A~-~~~~ei~~~Ll~~~a 57 (156)
T d1ihba_ 3 NELASAAARGDLEQLTSLLQN----------------------NVNV-NAQNGFGRTA-LQVMK-LGNPEIARRLLLRGA 57 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHTTS----------------------CCCT-TCCCTTSCCH-HHHCC-SSCHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCHHHHHHHHHC----------------------CCCc-CccCCccccc-ccccc-ccccccccccccccc
Confidence 579999999999999999883 6778 8899999999 99886 799999999999999
Q ss_pred ccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHH
Q 039483 107 LVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAA 186 (360)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A 186 (360)
+++. .+..|. ++++.++..++ .+.++.++..+.+++. .+..|.+|+|+|
T Consensus 58 ~~~~------------------~~~~~~---------~~l~~~~~~~~-~~~~~~l~~~~~~~~~---~~~~~~~~l~~a 106 (156)
T d1ihba_ 58 NPDL------------------KDRTGF---------AVIHDAARAGF-LDTLQTLLEFQADVNI---EDNEGNLPLHLA 106 (156)
T ss_dssp CTTC------------------CCTTSC---------CHHHHHHHHTC-HHHHHHHHHTTCCTTC---CCTTSCCHHHHH
T ss_pred cccc------------------ccccCc---------ccccccccccc-cccccccccccccccc---cccccccccccc
Confidence 9887 677774 78888889999 9999999999999998 999999999999
Q ss_pred HhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcC
Q 039483 187 TMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKID 246 (360)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g 246 (360)
+..++. +++++|+++++.+++.+|..|.||||+|+..++.+++++|+++|
T Consensus 107 ~~~~~~----------~~~~~Ll~~~~~~~~~~d~~g~TpL~~A~~~~~~~iv~~Ll~~G 156 (156)
T d1ihba_ 107 AKEGHL----------RVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156 (156)
T ss_dssp HHTTCH----------HHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred cccccc----------cccccccccccccccccCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 999999 99999999997788999999999999999999999999999887
|
| >d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Cell cycle inhibitor p19ink4D species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=3.1e-25 Score=181.14 Aligned_cols=151 Identities=16% Similarity=0.136 Sum_probs=136.7
Q ss_pred HHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHhccc
Q 039483 28 NLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIERAKL 107 (360)
Q Consensus 28 ~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~ 107 (360)
.|+.||+.|+++.|+.|++. . +.++ +.+|..|.|| ||+|+ .|+.+++++|++++.+
T Consensus 5 ~L~~Aa~~g~~~~vk~lL~~----~-----------------~~~~-n~~d~~g~t~-L~~A~-~~~~~~v~~Ll~~~~~ 60 (156)
T d1bd8a_ 5 RLSGAAARGDVQEVRRLLHR----E-----------------LVHP-DALNRFGKTA-LQVMM-FGSTAIALELLKQGAS 60 (156)
T ss_dssp HHHHHHHHTCHHHHHHHHHT----T-----------------CCCT-TCCCTTSCCH-HHHSC-TTCHHHHHHHHHTTCC
T ss_pred HHHHHHHcCCHHHHHHHHHh----C-----------------CCCC-CccCCCCCcc-ccccc-cccccccccccccccc
Confidence 49999999999999999873 1 6677 8899999999 99886 5899999999999999
Q ss_pred cCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHH
Q 039483 108 VQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAAT 187 (360)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~ 187 (360)
++. .+..|. +|++.++..++ .++++.++++|++++. +|..|.||||+|+
T Consensus 61 ~~~------------------~~~~~~---------~~l~~~~~~~~-~~~~~~~l~~~~~~n~---~~~~~~t~L~~A~ 109 (156)
T d1bd8a_ 61 PNV------------------QDTSGT---------SPVHDAARTGF-LDTLKVLVEHGADVNV---PDGTGALPIHLAV 109 (156)
T ss_dssp TTC------------------CCTTSC---------CHHHHHHHTTC-HHHHHHHHHTTCCSCC---CCTTSCCHHHHHH
T ss_pred ccc------------------cccccc---------ccccccccccc-cccccccccccccccc---ccCCCCeeecccc
Confidence 887 666664 78888899999 9999999999999999 9999999999999
Q ss_pred hcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhc
Q 039483 188 MHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKI 245 (360)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ 245 (360)
..|+. +++++|+ .+ .+++.+|..|+||||+|+.+|+.+++++|+++
T Consensus 110 ~~~~~----------~i~~~L~-~~-~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~h 155 (156)
T d1bd8a_ 110 QEGHT----------AVVSFLA-AE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHTCH----------HHHHHHH-TT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred ccccc----------ccccccc-cc-ccccccCCCCCCHHHHHHHcCCHHHHHHHHhh
Confidence 99999 9999887 45 67899999999999999999999999999875
|
| >d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: RNase L, 2-5a-dependent ribonuclease species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=1.4e-24 Score=193.81 Aligned_cols=232 Identities=17% Similarity=0.096 Sum_probs=174.2
Q ss_pred CCCCCHHHHHHHHcCChHHHHHHHHHHHhhh-hcccCCc----------ccccc-ccccccccccCCCCCCCCChHHHHH
Q 039483 22 QPQIDPNLFKVAAAGNLEPFKDMAREVIESL-LTARSRT----------QSCIS-TSNCRRQKMCQPVTAKGDTRSRHVA 89 (360)
Q Consensus 22 ~~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~-~~~~~~t----------~~~v~-l~~~~~~~~~~~~~~~g~tp~Lh~A 89 (360)
...+.||||.||..|+.++++.|++...... ....+.+ .+... .... .... ...+..|.|+ ++.|
T Consensus 36 ~~~g~tpL~~A~~~~~~eiv~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~-l~~a 112 (285)
T d1wdya_ 36 EEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSK-GADV-NECDFYGFTA-FMEA 112 (285)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCT-TCBCTTCCBH-HHHH
T ss_pred CCCCCCHHHHHHHcCCHHHhhhhccccccccccccccchhhHHHhhcCCccccchhhhh-cccc-cccccCCCch-hHHH
Confidence 3468899999999999999999988432221 0111111 11111 2222 2333 5667788889 9999
Q ss_pred HhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhh-CCC
Q 039483 90 AKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKS-CTS 168 (360)
Q Consensus 90 ~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~-g~~ 168 (360)
+..|+...++.++....+++..... .......+..| .||||+|+..|+ .+++++|+++ |++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~g---------~t~L~~A~~~~~-~~~~~~Ll~~~~~~ 174 (285)
T d1wdya_ 113 AVYGKVKALKFLYKRGANVNLRRKT--------KEDQERLRKGG---------ATALMDAAEKGH-VEVLKILLDEMGAD 174 (285)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCCC--------CHHHHHTTCCC---------CCHHHHHHHHTC-HHHHHHHHHTSCCC
T ss_pred HHhcchhhhhhhhhhcccccccccc--------hhhhhhhcccC---------chHHHHHHHcCC-HHHHHHHHhccCCC
Confidence 9999998888888877766542111 11222344445 488889999999 9999999975 788
Q ss_pred CCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHh-cCC
Q 039483 169 VSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILK-IDR 247 (360)
Q Consensus 169 ~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~-~g~ 247 (360)
++. .+..|.++++.+...+.. ....+++++|++.+ ++++.++..|.||||.|+..|+.+++++|++ .|+
T Consensus 175 i~~---~~~~~~~~~~~~~~~~~~------~~~~~i~~~Li~~g-a~~n~~~~~g~t~L~~a~~~~~~~~v~~lL~~~g~ 244 (285)
T d1wdya_ 175 VNA---CDNMGRNALIHALLSSDD------SDVEAITHLLLDHG-ADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHI 244 (285)
T ss_dssp TTC---CCTTSCCHHHHHHHCSCT------TTHHHHHHHHHHTT-CCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSC
T ss_pred ccc---ccCCCCcccccccccccc------hHHHHHHHHHHHCC-CCCCccCCCCCCccchhhhcCcHHHHHHHHHcCCC
Confidence 988 899999988766544322 01127899999998 7899999999999999999999999999996 589
Q ss_pred ccccccccCCCCchhhhhhcCCccc-ccccc--cccCccCCC
Q 039483 248 TAAKIADKDRKMTALHLVHGPKGCQ-NNMLA--SSLMDEGDA 286 (360)
Q Consensus 248 ~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~--~~~~~~~d~ 286 (360)
++ +.+|. +|+||||+|+..++.+ +++|+ |+++|.+|.
T Consensus 245 di-n~~d~-~G~TpL~~A~~~~~~eiv~~Ll~~GAd~n~~d~ 284 (285)
T d1wdya_ 245 EI-NDTDS-DGKTALLLAVELKLKKIAELLCKRGASTDCGDL 284 (285)
T ss_dssp CT-TCCCT-TSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSSC
T ss_pred CC-cCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccC
Confidence 99 99999 9999999999999999 99998 599998873
|
| >d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Myosin phosphatase targeting subunit 1, MYPT1 species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.93 E-value=9.2e-26 Score=202.51 Aligned_cols=188 Identities=17% Similarity=0.072 Sum_probs=167.7
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHH
Q 039483 79 AKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHT 158 (360)
Q Consensus 79 ~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~ 158 (360)
.+|.|| |+.||..|+.++|++|+++|++++. +|.+|. ||||+|+..|+ .++
T Consensus 38 ~~~~t~-l~~A~~~G~~~~v~~Ll~~Gadvn~------------------~d~~G~---------T~L~~A~~~g~-~ei 88 (291)
T d1s70b_ 38 FDDGAV-FLAACSSGDTEEVLRLLERGADINY------------------ANVDGL---------TALHQACIDDN-VDM 88 (291)
T ss_dssp ECHHHH-HHHHHHHTCHHHHHHHHHHCCCTTC------------------BCTTCC---------BHHHHHHHTTC-HHH
T ss_pred CCCchH-HHHHHHcCCHHHHHHHHHCCCCCCc------------------cCCCCC---------cHHHHHHhcCC-cee
Confidence 345699 9999999999999999999999998 888885 78888889999 999
Q ss_pred HHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHH
Q 039483 159 VVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLI 238 (360)
Q Consensus 159 ~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~ 238 (360)
+++|+++|++... .+..+.+||++++..++. ++++.|++.+ ...+..|..+.+++++|+..+..++
T Consensus 89 v~~Ll~~~~~~~~---~~~~~~~~L~~a~~~~~~----------~~~~~l~~~~-~~~~~~~~~~~~~~~~a~~~~~~~~ 154 (291)
T d1s70b_ 89 VKFLVENGANINQ---PDNEGWIPLHAAASCGYL----------DIAEYLISQG-AHVGAVNSEGDTPLDIAEEEAMEEL 154 (291)
T ss_dssp HHHHHHTTCCTTC---CCTTSCCHHHHHHHHTCH----------HHHHHHHHTT-CCTTCCCTTSCCHHHHCCSHHHHHH
T ss_pred eeeeccccccccc---cccccccccccccccccc----------chhhcccccC-cccccccccCccccccccccccchh
Confidence 9999999999888 888999999999999999 9999999998 6678889999999999999999888
Q ss_pred HHHHHhc-CCc--------------------------cccccccCCCCchhhhhhcCCccc-cccccc--ccCccCCCCC
Q 039483 239 LKLILKI-DRT--------------------------AAKIADKDRKMTALHLVHGPKGCQ-NNMLAS--SLMDEGDAKG 288 (360)
Q Consensus 239 v~~Ll~~-g~~--------------------------~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~~--~~~~~~d~~g 288 (360)
++.++.. +.+ . ...+. .|.||||+|+..++.+ ++.|+. ++++.++..|
T Consensus 155 ~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~g~t~L~~a~~~~~~~~~~~Ll~~g~din~~~~~g 232 (291)
T d1s70b_ 155 LQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHIND-VRHAK-SGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDG 232 (291)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCC-CCCTT-TCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTC
T ss_pred ccccccccccccccccccccccccccchhhhccccccc-ccccC-CCCChhhHHHHcCChhhhcccccceecccccccCC
Confidence 8888743 222 2 34556 8999999999999988 888884 8899999999
Q ss_pred CcHHHHHHHcCCHHHHHHHhhhh
Q 039483 289 NTTVHFFAAVHRKEIFDDLSGRV 311 (360)
Q Consensus 289 ~Tpl~~A~~~~~~~i~~~l~~~~ 311 (360)
+||||+|++.|+.++++.|+++.
T Consensus 233 ~TpL~~A~~~g~~~iv~lLl~~G 255 (291)
T d1s70b_ 233 WTPLHAAAHWGKEEACRILVENL 255 (291)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCHHHHHHHcCCHHHHHHHHHCC
Confidence 99999999999999999999875
|
| >d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Lin-12 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.92 E-value=2.1e-26 Score=204.93 Aligned_cols=189 Identities=21% Similarity=0.177 Sum_probs=155.3
Q ss_pred CCCCChHHHHHHhcCCHHHHHHH--------HHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHH
Q 039483 79 AKGDTRSRHVAAKFDHCDIVSVL--------IERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAA 150 (360)
Q Consensus 79 ~~g~tp~Lh~A~~~g~~~~v~~L--------l~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~ 150 (360)
..|.|| ||+||..|+.++|+.| ++.|++++. +|.+|+ ||||+|+
T Consensus 31 ~~g~T~-Lh~A~~~g~~~~v~~Ll~~~~~~~l~~Gadvn~------------------~d~~G~---------TpLh~A~ 82 (277)
T d2fo1e1 31 RHNRTV-LHWIASNSSAEKSEDLIVHEAKECIAAGADVNA------------------MDCDEN---------TPLMLAV 82 (277)
T ss_dssp SSCCCH-HHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTC------------------CCTTSC---------CHHHHHH
T ss_pred CCCccH-HHHHHHcCCHHHHHHHHhcchhHHHHcCCCccc------------------cCCCCC---------eeecccc
Confidence 459999 9999999999988776 556888887 888886 7788889
Q ss_pred hcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCc--cccccccCCCChHHH
Q 039483 151 EYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKK--SMIKGIDQCWWTPIH 228 (360)
Q Consensus 151 ~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~--~~i~~~d~~g~t~Lh 228 (360)
..|+ .+++++|+++|++++. ++..|.|||++|+..++. ++++.+..... ..++..+..+.++.+
T Consensus 83 ~~g~-~~iv~~Ll~~Gad~n~---~~~~g~t~l~~a~~~~~~----------~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 148 (277)
T d2fo1e1 83 LARR-RRLVAYLMKAGADPTI---YNKSERSALHQAAANRDF----------GMMVYMLNSTKLKGDIEELDRNGMTALM 148 (277)
T ss_dssp HHTC-HHHHHHHHHTTCCSCC---CCTTCCCHHHHHHHTTCH----------HHHHHHTTSHHHHHTTSCCCTTSCCHHH
T ss_pred cccc-cccccccccccccccc---ccccccccccchhhhcch----------hhhhhhhhcccccccccccccccchhHH
Confidence 9999 9999999999999999 999999999999999999 99988876642 345667888999999
Q ss_pred HHHHcCCHH---HHHHHHhcCC--------ccccccccCCCCchhhhhhcCCccc-ccccc---cccCccCCCCCCcHHH
Q 039483 229 YAAYHRNYL---ILKLILKIDR--------TAAKIADKDRKMTALHLVHGPKGCQ-NNMLA---SSLMDEGDAKGNTTVH 293 (360)
Q Consensus 229 ~A~~~~~~~---~v~~Ll~~g~--------~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~---~~~~~~~d~~g~Tpl~ 293 (360)
.+...+... .+..+.+... .. +..+. .|.||||+++..++.+ ...++ +.+.+.+|..|+||||
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~g~t~L~~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~tpL~ 226 (277)
T d2fo1e1 149 IVAHNEGRDQVASAKLLVEKGAKVDYDGAARK-DSEKY-KGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIM 226 (277)
T ss_dssp HHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGT-SSSSC-CCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHH
T ss_pred HHHhcccccccccccccccccccccccccccc-ccccc-CCCCccccccccccccccccccccccccccccCCCCCCHHH
Confidence 998887633 3444443322 12 34455 8999999999998887 55444 3788889999999999
Q ss_pred HHHHcCCHHHHHHHhhhh
Q 039483 294 FFAAVHRKEIFDDLSGRV 311 (360)
Q Consensus 294 ~A~~~~~~~i~~~l~~~~ 311 (360)
+|++.|+.++++.|++..
T Consensus 227 ~A~~~g~~~iv~~Ll~~g 244 (277)
T d2fo1e1 227 LAAQEGRIEVVMYLIQQG 244 (277)
T ss_dssp HHHHHTCHHHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHHHCc
Confidence 999999999999999875
|
| >d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Cell cycle inhibitor p19ink4D species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=7.2e-25 Score=178.95 Aligned_cols=149 Identities=19% Similarity=0.165 Sum_probs=138.7
Q ss_pred CHHHHHHhcCCcHHHHHHHHhh-CCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCC
Q 039483 144 IPLCMAAEYEHSSHTVVAILKS-CTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQC 222 (360)
Q Consensus 144 t~L~~A~~~g~~~~~~~~Ll~~-g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~ 222 (360)
++|+.|+..|+ .++++.|+.. +++++. +|..|+||||+|+. ++. +++++|++.+ .+++..+..
T Consensus 4 ~~L~~Aa~~g~-~~~vk~lL~~~~~~~n~---~d~~g~t~L~~A~~-~~~----------~~v~~Ll~~~-~~~~~~~~~ 67 (156)
T d1bd8a_ 4 DRLSGAAARGD-VQEVRRLLHRELVHPDA---LNRFGKTALQVMMF-GST----------AIALELLKQG-ASPNVQDTS 67 (156)
T ss_dssp HHHHHHHHHTC-HHHHHHHHHTTCCCTTC---CCTTSCCHHHHSCT-TCH----------HHHHHHHHTT-CCTTCCCTT
T ss_pred HHHHHHHHcCC-HHHHHHHHHhCCCCCCc---cCCCCCcccccccc-ccc----------cccccccccc-ccccccccc
Confidence 46999999999 9999999985 788998 99999999999875 888 9999999988 778999999
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-ccccc-cccCccCCCCCCcHHHHHHHcCC
Q 039483 223 WWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLA-SSLMDEGDAKGNTTVHFFAAVHR 300 (360)
Q Consensus 223 g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~-~~~~~~~d~~g~Tpl~~A~~~~~ 300 (360)
|.+|++.++..++.+++++++++|+++ +.+|. .|.||||+|+..++.+ +++|+ +++++.+|..|+||||+|++.|+
T Consensus 68 ~~~~l~~~~~~~~~~~~~~~l~~~~~~-n~~~~-~~~t~L~~A~~~~~~~i~~~L~~~~~~~~~d~~G~TpL~~A~~~g~ 145 (156)
T d1bd8a_ 68 GTSPVHDAARTGFLDTLKVLVEHGADV-NVPDG-TGALPIHLAVQEGHTAVVSFLAAESDLHRRDARGLTPLELALQRGA 145 (156)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCS-CCCCT-TSCCHHHHHHHHTCHHHHHHHHTTSCTTCCCTTSCCHHHHHHHSCC
T ss_pred ccccccccccccccccccccccccccc-ccccC-CCCeeeccccccccccccccccccccccccCCCCCCHHHHHHHcCC
Confidence 999999999999999999999999999 99999 9999999999999998 88777 48999999999999999999999
Q ss_pred HHHHHHHhhh
Q 039483 301 KEIFDDLSGR 310 (360)
Q Consensus 301 ~~i~~~l~~~ 310 (360)
.++++.|+.+
T Consensus 146 ~~iv~~Ll~h 155 (156)
T d1bd8a_ 146 QDLVDILQGH 155 (156)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHhh
Confidence 9999999865
|
| >d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: p18ink4C(ink6) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=6.1e-25 Score=178.92 Aligned_cols=149 Identities=19% Similarity=0.171 Sum_probs=140.1
Q ss_pred CHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCC
Q 039483 144 IPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCW 223 (360)
Q Consensus 144 t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g 223 (360)
+|||+|+..|+ .++++.|+++|++++. +|..|.||||+|+ .++. +++++|++.+ .+++..+..+
T Consensus 3 ~~Lh~Aa~~g~-~~~v~~Ll~~g~d~n~---~d~~g~TpL~~A~-~~~~----------ei~~~Ll~~~-a~~~~~~~~~ 66 (156)
T d1ihba_ 3 NELASAAARGD-LEQLTSLLQNNVNVNA---QNGFGRTALQVMK-LGNP----------EIARRLLLRG-ANPDLKDRTG 66 (156)
T ss_dssp HHHHHHHHHTC-HHHHHHHTTSCCCTTC---CCTTSCCHHHHCC-SSCH----------HHHHHHHHTT-CCTTCCCTTS
T ss_pred HHHHHHHHcCC-HHHHHHHHHCCCCcCc---cCCcccccccccc-cccc----------cccccccccc-cccccccccC
Confidence 68999999999 9999999999999999 9999999999886 6899 9999999998 8899999999
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-cccccc---ccCccCCCCCCcHHHHHHHcC
Q 039483 224 WTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLAS---SLMDEGDAKGNTTVHFFAAVH 299 (360)
Q Consensus 224 ~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~~---~~~~~~d~~g~Tpl~~A~~~~ 299 (360)
.++++.++..++..+++.|++.+.++ +..+. .|.+|+|+|+..++.+ ++.|+. .+.+.+|..|+||||+|++.+
T Consensus 67 ~~~l~~~~~~~~~~~~~~l~~~~~~~-~~~~~-~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~TpL~~A~~~~ 144 (156)
T d1ihba_ 67 FAVIHDAARAGFLDTLQTLLEFQADV-NIEDN-EGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYG 144 (156)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT-TSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTT
T ss_pred cccccccccccccccccccccccccc-ccccc-ccccccccccccccccccccccccccccccccCCCCCCHHHHHHHcC
Confidence 99999999999999999999999999 99999 9999999999999988 888773 588999999999999999999
Q ss_pred CHHHHHHHhhh
Q 039483 300 RKEIFDDLSGR 310 (360)
Q Consensus 300 ~~~i~~~l~~~ 310 (360)
+.++++.|++.
T Consensus 145 ~~~iv~~Ll~~ 155 (156)
T d1ihba_ 145 RNEVVSLMQAN 155 (156)
T ss_dssp CHHHHHHHHHT
T ss_pred CHHHHHHHHhc
Confidence 99999998764
|
| >d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: GA bindinig protein (GABP) beta 1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.91 E-value=2.5e-24 Score=174.62 Aligned_cols=145 Identities=21% Similarity=0.244 Sum_probs=116.3
Q ss_pred CChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHH
Q 039483 82 DTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVA 161 (360)
Q Consensus 82 ~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~ 161 (360)
.|| ||.||+.|+.++|++|+++|++++ .|..|. ||||+|+..++ .++++.
T Consensus 3 ~t~-L~~Aa~~g~~~~v~~LL~~ga~~~-------------------~~~~g~---------t~L~~a~~~~~-~~~~~~ 52 (153)
T d1awcb_ 3 GKK-LLEAARAGQDDEVRILMANGAPFT-------------------TDWLGT---------SPLHLAAQYGH-FSTTEV 52 (153)
T ss_dssp HHH-HHHHHHHTCHHHHHHHHHHTCCCC-------------------CCTTCC---------CHHHHHHHHTC-HHHHHH
T ss_pred CHH-HHHHHHCCCHHHHHHHHHcCCCcc-------------------cccCCC---------ccccccccccc-cccccc
Confidence 388 999999999999999999998654 466664 77777788888 888888
Q ss_pred HHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHH
Q 039483 162 ILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKL 241 (360)
Q Consensus 162 Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~ 241 (360)
++........ .+..+.++++.++...+. +++++++..+ .+++.+|..|+||||+|+..|+.+++++
T Consensus 53 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~----------~~~~~l~~~~-~~~~~~~~~g~T~L~~A~~~g~~~iv~~ 118 (153)
T d1awcb_ 53 LLRAGVSRDA---RTKVDRTPLHMAASEGHA----------NIVEVLLKHG-ADVNAKDMLKMTALHWATEHNHQEVVEL 118 (153)
T ss_dssp HHTTTCCTTC---CCTTCCCHHHHHHHHTCH----------HHHHHHHTTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred cccccccccc---cccccccccccccccccc----------eeeecccccC-CccccccccCchHHHhhhhcchhheeee
Confidence 8888777666 677788889999998888 8999988888 6778888999999999999999999999
Q ss_pred HHhcCCccccccccCCCCchhhhhhcCCccc
Q 039483 242 ILKIDRTAAKIADKDRKMTALHLVHGPKGCQ 272 (360)
Q Consensus 242 Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~ 272 (360)
|++.|+++ +.+|. +|.||||+|+..++.+
T Consensus 119 ll~~gad~-~~~d~-~g~Tpl~~A~~~g~~e 147 (153)
T d1awcb_ 119 LIKYGADV-HTQSK-FCKTAFDISIDNGNED 147 (153)
T ss_dssp HHHTTCCT-TCCCT-TSCCHHHHHHHTTCHH
T ss_pred ccccccCC-cccCC-CCCCHHHHHHHcCCHH
Confidence 99999888 66666 5555555555544444
|
| >d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: GA bindinig protein (GABP) beta 1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.91 E-value=1.2e-23 Score=170.50 Aligned_cols=149 Identities=22% Similarity=0.247 Sum_probs=133.6
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHhcc
Q 039483 27 PNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIERAK 106 (360)
Q Consensus 27 ~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~ 106 (360)
+||+.||+.|+.++++.|++. +..+ + .|..|.|| ||+|+..++.++++.++....
T Consensus 4 t~L~~Aa~~g~~~~v~~LL~~----------------------ga~~-~-~~~~g~t~-L~~a~~~~~~~~~~~~~~~~~ 58 (153)
T d1awcb_ 4 KKLLEAARAGQDDEVRILMAN----------------------GAPF-T-TDWLGTSP-LHLAAQYGHFSTTEVLLRAGV 58 (153)
T ss_dssp HHHHHHHHHTCHHHHHHHHHH----------------------TCCC-C-CCTTCCCH-HHHHHHHTCHHHHHHHHTTTC
T ss_pred HHHHHHHHCCCHHHHHHHHHc----------------------CCCc-c-cccCCCcc-ccccccccccccccccccccc
Confidence 789999999999999999984 4444 4 68899999 999999999999999998776
Q ss_pred ccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHH
Q 039483 107 LVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAA 186 (360)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A 186 (360)
.... .+..+ .++++.++...+ .++++++..+|++++. ++..|.||||+|
T Consensus 59 ~~~~------------------~~~~~---------~~~~~~~~~~~~-~~~~~~l~~~~~~~~~---~~~~g~T~L~~A 107 (153)
T d1awcb_ 59 SRDA------------------RTKVD---------RTPLHMAASEGH-ANIVEVLLKHGADVNA---KDMLKMTALHWA 107 (153)
T ss_dssp CTTC------------------CCTTC---------CCHHHHHHHHTC-HHHHHHHHTTTCCTTC---CCTTSCCHHHHH
T ss_pred cccc------------------ccccc---------cccccccccccc-ceeeecccccCCcccc---ccccCchHHHhh
Confidence 5544 34444 378888888899 9999999999999998 999999999999
Q ss_pred HhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHH
Q 039483 187 TMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLI 242 (360)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~L 242 (360)
+..|+. +++++|++.+ ++++.+|..|.||||+|+.+|+.+++++|
T Consensus 108 ~~~g~~----------~iv~~ll~~g-ad~~~~d~~g~Tpl~~A~~~g~~eiv~lL 152 (153)
T d1awcb_ 108 TEHNHQ----------EVVELLIKYG-ADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHTTCH----------HHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred hhcchh----------heeeeccccc-cCCcccCCCCCCHHHHHHHcCCHHHHHhC
Confidence 999999 9999999998 88999999999999999999999999876
|
| >d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Pseudo ankyrin repeat-like family: Pseudo ankyrin repeat domain: Hypothetical protein LPG2416 species: Legionella pneumophila [TaxId: 446]
Probab=99.91 E-value=8.6e-27 Score=215.38 Aligned_cols=229 Identities=13% Similarity=0.036 Sum_probs=154.5
Q ss_pred CCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHH
Q 039483 24 QIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIE 103 (360)
Q Consensus 24 ~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~ 103 (360)
.+.++||.||++|+.+.++.+-. |... +..+ +.+|..|.|| ||+||+.||.++|++|++
T Consensus 89 ~~~t~L~~Aa~~g~~~~~~~~~~------------------L~~~-~~~i-n~~~~~g~ta-L~~Aa~~G~~~~v~~Ll~ 147 (346)
T d2ajaa1 89 KSEVICFVAAITGCSSALDTLCL------------------LLTS-DEIV-KVIQAENYQA-FRLAAENGHLHVLNRLCE 147 (346)
T ss_dssp CHHHHHHHHHHHCCHHHHHHHTT------------------C--C-CSSC-C--CHHHHHH-HHHHHHTTCHHHHHHHHH
T ss_pred CCCcHHHHHHHhCCHHHHHHHHH------------------HHhC-CCcc-cccCCCCCCH-HHHHHHCCCHHHHHHHHH
Confidence 45688999999999887766411 1111 6777 8888889999 999999999999999999
Q ss_pred hccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHH
Q 039483 104 RAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQAL 183 (360)
Q Consensus 104 ~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~L 183 (360)
+|++++..+ .+.+| .||||+|+..|+ .+++++|++.|+........+..+.||+
T Consensus 148 ~g~~~~~~~----------------~~~~g---------~t~L~~Aa~~g~-~~iv~~Ll~~~~~~~~~~~~~~~~~t~l 201 (346)
T d2ajaa1 148 LAPTEIMAM----------------IQAEN---------YHAFRLAAENGH-LHVLNRLCELAPTEATAMIQAENYYAFR 201 (346)
T ss_dssp SCTTTHHHH----------------HSHHH---------HHHHHHHHHTTC-HHHHHHHHHSCGGGHHHHHHHHHHHHHH
T ss_pred cCCCccccc----------------cccCC---------CChhHHHHHHhh-HHHHHHHHHcCCcccccccccCCCcchh
Confidence 998876511 12234 488888888999 9999999998876533111344567788
Q ss_pred HHHHhcCCcccccccCChHHHHHHHHhcCcccccccc-------CCCChHHHHHHHcCCHHHHHHHHhcCCccc-ccccc
Q 039483 184 HAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGID-------QCWWTPIHYAAYHRNYLILKLILKIDRTAA-KIADK 255 (360)
Q Consensus 184 h~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d-------~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~-~~~d~ 255 (360)
|+|+..|+. +++++|++.+ ++++..+ ..+.++++.+...+..+....+.....+.. +..+.
T Consensus 202 ~~A~~~g~~----------~iv~~Ll~~g-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ 270 (346)
T d2ajaa1 202 WAAVGRGHH----------NVINFLLDCP-VMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTK 270 (346)
T ss_dssp HHHSTTCCH----------HHHHHHTTSH-HHHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHHTTTTTTSSSSCCCCSSH
T ss_pred hHHhhcCHH----------HHHHHHHhCC-CCcchHHHHHHHcCcHhhhHHHHHhhccchHHHHHHHHhcccccHhHHhc
Confidence 888889999 9999999877 4443322 233455666555554444443332222110 11111
Q ss_pred ------CCCCchhhhhhcCCccc-cccccc-------ccCccCCCCCCcHHHHHHHcCCHHHHHHHhhh
Q 039483 256 ------DRKMTALHLVHGPKGCQ-NNMLAS-------SLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGR 310 (360)
Q Consensus 256 ------~~g~tpLh~A~~~~~~~-~~~L~~-------~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~ 310 (360)
..+.++++.|+..+..+ +++|+. ...+..+.+|+||||+|++.|+.++++.|+..
T Consensus 271 ~~~~~~~~~~~~l~~a~~~~~ld~v~~Ll~~~~~~~~~~~~~~~~~g~T~LhlA~~~Gn~e~v~lLL~~ 339 (346)
T d2ajaa1 271 SECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSI 339 (346)
T ss_dssp HHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTTS
T ss_pred ccccccchhhhHHHHHhcCChHHHHHHHHhCcChhhhcccccCCCCCCcHHHHHHHcCcHHHHHHHhCC
Confidence 02356788888777777 777763 33445566899999999999999999999764
|
| >d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Neurogenic locus notch receptor domain species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.91 E-value=1.6e-23 Score=178.52 Aligned_cols=187 Identities=17% Similarity=0.134 Sum_probs=161.6
Q ss_pred CCCCHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHH
Q 039483 23 PQIDPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLI 102 (360)
Q Consensus 23 ~~~~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll 102 (360)
..+.||||+||+.|+.++++.|+.. +..+ +.++..+.++ ++.++..++........
T Consensus 21 ~~G~t~L~~A~~~g~~e~v~~Ll~~----------------------g~~~-n~~~~~~~~~-~~~~~~~~~~~~~~~~~ 76 (209)
T d1ot8a_ 21 KTGETSLHLAARFARADAAKRLLDA----------------------GADA-NSQDNTGRTP-LHAAVAADAMGVFQILL 76 (209)
T ss_dssp HHCCCHHHHHHHTTCHHHHHHHHHT----------------------TCCT-TCCCTTSCCH-HHHHHHTTCHHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhh----------------------cccc-cccccccccc-ccccccccccccccccc
Confidence 4577999999999999999999884 6667 8899999999 99999999988877766
Q ss_pred HhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcH
Q 039483 103 ERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQA 182 (360)
Q Consensus 103 ~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~ 182 (360)
........ .....|. ++.+.+..... ....+.|...+.+++. ++..|.||
T Consensus 77 ~~~~~~~~-----------------~~~~~~~---------~~~~~~~~~~~-~~~~~~L~~~~~~~~~---~~~~~~t~ 126 (209)
T d1ot8a_ 77 RNRATNLN-----------------ARMHDGT---------TPLILAARLAI-EGMVEDLITADADINA---ADNSGKTA 126 (209)
T ss_dssp TCTTCCTT-----------------CCCTTCC---------CHHHHHHHTTC-TTHHHHHHHTTCCTTC---BCTTSCBH
T ss_pred cccccccc-----------------ccccccc---------ccccccccccc-hhhhhhhhhhcccccc---cCCCCCCc
Confidence 65443322 1334443 66666777777 8889999999999999 99999999
Q ss_pred HHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchh
Q 039483 183 LHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTAL 262 (360)
Q Consensus 183 Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpL 262 (360)
|++++..+.. ++++.++..+ .+++..|..|.||||+|+..|+.+++++|+++|+++ +.+|. .|+|||
T Consensus 127 l~~~~~~~~~----------~~~~~l~~~~-~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gad~-n~~d~-~g~Tpl 193 (209)
T d1ot8a_ 127 LHWAAAVNNT----------EAVNILLMHH-ANRDAQDDKDETPLFLAAREGSYEASKALLDNFANR-EITDH-MDRLPR 193 (209)
T ss_dssp HHHHHHTTCH----------HHHHHHHHTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-TSCCHH
T ss_pred chhhcccCcc----------eeeeeecccc-ccccccccccccccchhccccHHHHHHHHHHCCCCC-CCcCC-CCCCHH
Confidence 9999999999 9999999998 778999999999999999999999999999999999 99999 999999
Q ss_pred hhhhcCCccc-cccc
Q 039483 263 HLVHGPKGCQ-NNML 276 (360)
Q Consensus 263 h~A~~~~~~~-~~~L 276 (360)
|+|+..++.+ +++|
T Consensus 194 ~~A~~~~~~~iv~lL 208 (209)
T d1ot8a_ 194 DVASERLHHDIVRLL 208 (209)
T ss_dssp HHHHHTTCHHHHHHH
T ss_pred HHHHHcCCHHHHhhc
Confidence 9999999887 6554
|
| >d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: bcl-3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=1.7e-22 Score=172.14 Aligned_cols=190 Identities=15% Similarity=0.118 Sum_probs=162.7
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHH----hccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCC
Q 039483 79 AKGDTRSRHVAAKFDHCDIVSVLIE----RAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEH 154 (360)
Q Consensus 79 ~~g~tp~Lh~A~~~g~~~~v~~Ll~----~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~ 154 (360)
.+|+|| ||+||..|+.++|+.|++ .|++++. +|..|. ||||+|+..|+
T Consensus 1 ~dG~Tp-Lh~A~~~g~~~~v~~Ll~~~~~~g~~in~------------------~d~~g~---------TpL~~A~~~~~ 52 (228)
T d1k1aa_ 1 EDGDTP-LHIAVVQGNLPAVHRLVNLFQQGGRELDI------------------YNNLRQ---------TPLHLAVITTL 52 (228)
T ss_dssp CTTCCH-HHHHHHTTCHHHHHHHHHHHHHTTCCSCC------------------CCTTSC---------CHHHHHHHTTC
T ss_pred CCCccH-HHHHHHcCCHHHHHHHHHHHHHCCCCCCc------------------cCCCCC---------ccceehhcccc
Confidence 369999 999999999999998875 7888887 788885 78888899999
Q ss_pred cHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCc---cccccccCCCChHHHHHH
Q 039483 155 SSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKK---SMIKGIDQCWWTPIHYAA 231 (360)
Q Consensus 155 ~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~---~~i~~~d~~g~t~Lh~A~ 231 (360)
.+++++|+++|++.+. .+..+.++++.|...++. ++++.+..... ...+.......++||.+.
T Consensus 53 -~~iv~~Ll~~ga~~~~---~~~~~~~~~~~a~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 118 (228)
T d1k1aa_ 53 -PSVVRLLVTAGASPMA---LDRHGQTAAHLACEHRSP----------TCLRALLDSAAPGTLDLEARNYDGLTALHVAV 118 (228)
T ss_dssp -HHHHHHHHHTTCCTTC---CCTTSCCHHHHHHHTTCH----------HHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHH
T ss_pred -cccccccccccccccc---cccccccccccccccccc----------cchhhhhhcccccccccccccccccccccccc
Confidence 9999999999999999 899999999999999999 88888776542 223344567789999999
Q ss_pred HcCCHHHHHHHHhcCCccccccccCCCCchhhhhhcCCccc-ccccc--cccCccCCCCCCcHHHHHHHcCCHHHHHHHh
Q 039483 232 YHRNYLILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ-NNMLA--SSLMDEGDAKGNTTVHFFAAVHRKEIFDDLS 308 (360)
Q Consensus 232 ~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~-~~~L~--~~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~ 308 (360)
........+.|.....+....... .|.+|++.|+..+... .+.++ +...+.+|..|+||||+|+.+|+.++++.|+
T Consensus 119 ~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll 197 (228)
T d1k1aa_ 119 NTECQETVQLLLERGADIDAVDIK-SGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLV 197 (228)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTT-TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHH
T ss_pred ccccchhhhhhhcccccccccccc-chhhHHHHHHHhhhhhhhhhhhhhccccccccccCcchHHHHHHcCCHHHHHHHH
Confidence 999999999999888776345555 8999999999888777 66665 4888899999999999999999999999999
Q ss_pred hhh
Q 039483 309 GRV 311 (360)
Q Consensus 309 ~~~ 311 (360)
++.
T Consensus 198 ~~G 200 (228)
T d1k1aa_ 198 RSG 200 (228)
T ss_dssp HTT
T ss_pred HCC
Confidence 874
|
| >d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Swi6 ankyrin-repeat fragment species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.89 E-value=3.3e-23 Score=187.42 Aligned_cols=160 Identities=14% Similarity=0.137 Sum_probs=112.9
Q ss_pred cccccCCC-CCCCCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHH
Q 039483 70 RQKMCQPV-TAKGDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCM 148 (360)
Q Consensus 70 ~~~~~~~~-~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~ 148 (360)
+.++ +.+ |.+|+|| ||+||..|+.++|++|+++|++++. +|..|+||||.
T Consensus 96 ~~dv-n~~~D~~G~T~-LH~Aa~~g~~~~v~~Ll~~gad~~~------------------~d~~G~TpL~~--------- 146 (301)
T d1sw6a_ 96 QLNL-NIPVDEHGNTP-LHWLTSIANLELVKHLVKHGSNRLY------------------GDNMGESCLVK--------- 146 (301)
T ss_dssp CCCS-CSCCSTTCCCH-HHHHHHTTCHHHHHHHHHTTCCTTB------------------CCTTCCCHHHH---------
T ss_pred CCCc-CcCcCCCCCCH-HHHHHHcCCHHHHHHHHHCCCCCCc------------------CCcccccHHHH---------
Confidence 4566 544 8999999 9999999999999999999999998 88999755554
Q ss_pred HHhcCCc-----H-HHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCC--hHHHHHHHHhcCcc------
Q 039483 149 AAEYEHS-----S-HTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLS--NDCAVQQLFEGKKS------ 214 (360)
Q Consensus 149 A~~~g~~-----~-~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~--~~~~~~~Ll~~~~~------ 214 (360)
|+..++. . ++++++. ..+.. +|..|+||||+++..+.......... .+.++..+...+..
T Consensus 147 A~~~~~~~~~~~~~~ll~~l~---~~~~~---~d~~g~t~lh~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 220 (301)
T d1sw6a_ 147 AVKSVNNYDSGTFEALLDYLY---PCLIL---EDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGT 220 (301)
T ss_dssp HHHSSHHHHTTCHHHHHHHHG---GGGGE---ECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-
T ss_pred hhhcccchhhhhHHHHHHHHh---hhhhh---cccccCCHHHHHHHHhCccccHHHHHHHHHHHHHHHHhcCCcchhccc
Confidence 4443320 2 3344333 23455 78899999999887654300000000 00122333332211
Q ss_pred ------------------------------ccccccCCCChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhh
Q 039483 215 ------------------------------MIKGIDQCWWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHL 264 (360)
Q Consensus 215 ------------------------------~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~ 264 (360)
.+|.+|..|+||||+|++.|+.+++++|+++|+++ +.+|+ .|.|||++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~D~~G~TpLh~A~~~g~~~iv~~Ll~~GAd~-~~~n~-~G~Tpl~~ 298 (301)
T d1sw6a_ 221 NEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADP-FIANK-SGLRPVDF 298 (301)
T ss_dssp ---------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCT-TCCCT-TSCCGGGG
T ss_pred ccccchhHHHHhcchHHHHHHHhhHHHHhcCccCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCC-CCCCHHHH
Confidence 15677888999999999999999999999999998 99998 99999999
Q ss_pred hh
Q 039483 265 VH 266 (360)
Q Consensus 265 A~ 266 (360)
|+
T Consensus 299 A~ 300 (301)
T d1sw6a_ 299 GA 300 (301)
T ss_dssp TC
T ss_pred cC
Confidence 85
|
| >d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Myotrophin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.89 E-value=1.4e-23 Score=163.18 Aligned_cols=107 Identities=20% Similarity=0.163 Sum_probs=103.4
Q ss_pred cCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCC
Q 039483 143 KIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQC 222 (360)
Q Consensus 143 ~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~ 222 (360)
.|||++|++.|+ .+++++|+++|++++. ++..|+||||+|+..|+. +++++|++.+ .+++.+|..
T Consensus 3 ~tpL~~A~~~g~-~~~v~~Ll~~g~d~n~---~~~~g~t~lh~A~~~~~~----------~~~~~ll~~g-~din~~d~~ 67 (118)
T d1myoa_ 3 DKEFMWALKNGD-LDEVKDYVAKGEDVNR---TLEGGRKPLHYAADCGQL----------EILEFLLLKG-ADINAPDKH 67 (118)
T ss_dssp HHHHHHHHHTTC-HHHHHHHHTTTCCCCC---CSSSSCCTTHHHHHHSTT----------THHHHHHHSS-CTTTCCSSS
T ss_pred ChHHHHHHHCCC-HHHHHHHHHhhhcccc---cccccccccccccccccc----------cccccccccc-ceeeecccc
Confidence 389999999999 9999999999999999 999999999999999999 9999999999 889999999
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhhh
Q 039483 223 WWTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLVH 266 (360)
Q Consensus 223 g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~ 266 (360)
|+||||+|+.+|+.+++++|+++|+++ +.+|. +|+||||+|.
T Consensus 68 g~tpLh~A~~~~~~~~v~~Ll~~Gad~-~~~d~-~G~t~l~~a~ 109 (118)
T d1myoa_ 68 HITPLLSAVYEGHVSCVKLLLSKGADK-TVKGP-DGLTALEATD 109 (118)
T ss_dssp CSCHHHHHHTTTCCHHHHHHHTTCCCS-SSSSS-STCCCCCTCS
T ss_pred cccchhhhhhcCchhhhhhhhcccccc-eeeCC-CCCCHHHHHh
Confidence 999999999999999999999999999 99999 9999999983
|
| >d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Cell cycle inhibitor p16ink4A species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=3.2e-23 Score=162.72 Aligned_cols=120 Identities=13% Similarity=0.047 Sum_probs=107.6
Q ss_pred CCChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHH
Q 039483 81 GDTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVV 160 (360)
Q Consensus 81 g~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~ 160 (360)
+.++ ||+||..|+.++|++|+++|++++. +|..|.||+|.| ..|+ .++++
T Consensus 3 ~~~~-L~~Aa~~G~~~~v~~Ll~~gad~n~------------------~~~~g~t~l~~a----------~~g~-~~~v~ 52 (125)
T d1bi7b_ 3 SADW-LATAAARGRVEEVRALLEAGANPNA------------------PNSYGRRPIQVM----------MMGS-ARVAE 52 (125)
T ss_dssp STTH-HHHHHHHTCHHHHHHHHTTTCCTTC------------------CCSSSCCTTTSS----------CTTC-HHHHH
T ss_pred ChhH-HHHHHHCCCHHHHHHHHHcCCcccc------------------cccccccccccc----------cccc-ccccc
Confidence 4578 9999999999999999999999988 888887555433 3578 99999
Q ss_pred HHHhhCCCCCccccCCCCCC-cHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHH
Q 039483 161 AILKSCTSVSHIYMKAPMER-QALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLIL 239 (360)
Q Consensus 161 ~Ll~~g~~~~~~~~~d~~g~-t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v 239 (360)
+|+++|++++. ++..+. ||||+|++.|+. +++++|++.+ .+++.+|..|+||||+|+.+|+.+++
T Consensus 53 ~Ll~~ga~~~~---~~~~~~~~~L~~A~~~g~~----------~~v~~Ll~~g-a~~~~~d~~G~T~l~~A~~~g~~~~v 118 (125)
T d1bi7b_ 53 LLLLHGAEPNC---ADPATLTRPVHDAAREGFL----------DTLVVLHRAG-ARLDVRDAWGRLPVDLAEELGHRDVA 118 (125)
T ss_dssp HHHTTTCCCCC---CCTTTCCCHHHHHHHHTCH----------HHHHHHHHHT-CCSSCCCTTCCCHHHHHHHHTCHHHH
T ss_pred ccccccccccc---ccccccccccccccccccc----------cccccccccc-cccccccCCCCCHHHHHHHcCCHHHH
Confidence 99999999998 888765 699999999999 9999999998 88999999999999999999999999
Q ss_pred HHHHh
Q 039483 240 KLILK 244 (360)
Q Consensus 240 ~~Ll~ 244 (360)
++|++
T Consensus 119 ~~Lls 123 (125)
T d1bi7b_ 119 RYLRA 123 (125)
T ss_dssp HHHSS
T ss_pred HHHHh
Confidence 99975
|
| >d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Cell cycle inhibitor p16ink4A species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.86 E-value=4.3e-22 Score=156.19 Aligned_cols=120 Identities=13% Similarity=0.099 Sum_probs=108.5
Q ss_pred CHHHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhcCCHHHHHHHHHhc
Q 039483 26 DPNLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKFDHCDIVSVLIERA 105 (360)
Q Consensus 26 ~~~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~Ll~~g 105 (360)
.+.||.||+.|++++++.|++. +.++ +.+|..|.|| ||.| ..|+.+++++|+++|
T Consensus 4 ~~~L~~Aa~~G~~~~v~~Ll~~----------------------gad~-n~~~~~g~t~-l~~a-~~g~~~~v~~Ll~~g 58 (125)
T d1bi7b_ 4 ADWLATAAARGRVEEVRALLEA----------------------GANP-NAPNSYGRRP-IQVM-MMGSARVAELLLLHG 58 (125)
T ss_dssp TTHHHHHHHHTCHHHHHHHHTT----------------------TCCT-TCCCSSSCCT-TTSS-CTTCHHHHHHHHTTT
T ss_pred hhHHHHHHHCCCHHHHHHHHHc----------------------CCcc-cccccccccc-cccc-ccccccccccccccc
Confidence 4679999999999999999883 6677 8899999999 9966 579999999999999
Q ss_pred cccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHH
Q 039483 106 KLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHA 185 (360)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~ 185 (360)
++++. ++..|. .||||+|++.|+ .+++++|+++|++++. +|..|+||||+
T Consensus 59 a~~~~------------------~~~~~~--------~~~L~~A~~~g~-~~~v~~Ll~~ga~~~~---~d~~G~T~l~~ 108 (125)
T d1bi7b_ 59 AEPNC------------------ADPATL--------TRPVHDAAREGF-LDTLVVLHRAGARLDV---RDAWGRLPVDL 108 (125)
T ss_dssp CCCCC------------------CCTTTC--------CCHHHHHHHHTC-HHHHHHHHHHTCCSSC---CCTTCCCHHHH
T ss_pred ccccc------------------cccccc--------cccccccccccc-cccccccccccccccc---ccCCCCCHHHH
Confidence 99988 566553 378999999999 9999999999999999 99999999999
Q ss_pred HHhcCCcccccccCChHHHHHHHHh
Q 039483 186 ATMHIDLCKFNHTLSNDCAVQQLFE 210 (360)
Q Consensus 186 A~~~~~~~~~~~~~~~~~~~~~Ll~ 210 (360)
|++.|+. +++++|+.
T Consensus 109 A~~~g~~----------~~v~~Lls 123 (125)
T d1bi7b_ 109 AEELGHR----------DVARYLRA 123 (125)
T ss_dssp HHHHTCH----------HHHHHHSS
T ss_pred HHHcCCH----------HHHHHHHh
Confidence 9999999 99999975
|
| >d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Myotrophin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.86 E-value=5.9e-23 Score=159.52 Aligned_cols=107 Identities=16% Similarity=0.065 Sum_probs=100.5
Q ss_pred CChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHH
Q 039483 82 DTRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVA 161 (360)
Q Consensus 82 ~tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~ 161 (360)
+|| |++|++.|+.++|++|+++|++++. +|..|. ||||+|+..|+ .+++++
T Consensus 3 ~tp-L~~A~~~g~~~~v~~Ll~~g~d~n~------------------~~~~g~---------t~lh~A~~~~~-~~~~~~ 53 (118)
T d1myoa_ 3 DKE-FMWALKNGDLDEVKDYVAKGEDVNR------------------TLEGGR---------KPLHYAADCGQ-LEILEF 53 (118)
T ss_dssp HHH-HHHHHHTTCHHHHHHHHTTTCCCCC------------------CSSSSC---------CTTHHHHHHST-TTHHHH
T ss_pred ChH-HHHHHHCCCHHHHHHHHHhhhcccc------------------cccccc---------ccccccccccc-cccccc
Confidence 479 9999999999999999999999988 788885 77788888999 999999
Q ss_pred HHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHH
Q 039483 162 ILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAA 231 (360)
Q Consensus 162 Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~ 231 (360)
|+++|++++. +|..|+||||+|+..|+. +++++|++.+ ++++.+|..|+||||+|.
T Consensus 54 ll~~g~din~---~d~~g~tpLh~A~~~~~~----------~~v~~Ll~~G-ad~~~~d~~G~t~l~~a~ 109 (118)
T d1myoa_ 54 LLLKGADINA---PDKHHITPLLSAVYEGHV----------SCVKLLLSKG-ADKTVKGPDGLTALEATD 109 (118)
T ss_dssp HHHSSCTTTC---CSSSCSCHHHHHHTTTCC----------HHHHHHHTTC-CCSSSSSSSTCCCCCTCS
T ss_pred cccccceeee---cccccccchhhhhhcCch----------hhhhhhhccc-ccceeeCCCCCCHHHHHh
Confidence 9999999999 999999999999999999 9999999999 889999999999999984
|
| >d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: 53BP2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.84 E-value=2e-21 Score=153.39 Aligned_cols=118 Identities=19% Similarity=0.087 Sum_probs=103.9
Q ss_pred CHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCC
Q 039483 144 IPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCW 223 (360)
Q Consensus 144 t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g 223 (360)
++|+.|+..|+ .+++++|+++|++++. +|..|+||||+|+..++. +++++|++.+ .+++.+|.+|
T Consensus 3 ~lL~~A~~~G~-~~~v~~Ll~~g~d~n~---~d~~g~t~Lh~A~~~~~~----------~~~~~ll~~g-~~~~~~d~~g 67 (130)
T d1ycsb1 3 ALLLDSSLEGE-FDLVQRIIYEVDDPSL---PNDEGITALHNAVCAGHT----------EIVKFLVQFG-VNVNAADSDG 67 (130)
T ss_dssp HHHHHHHHHTC-HHHHHHHTSTTSSCCC---CCTTSCCHHHHHHHHTCH----------HHHHHHHHHT-CCTTCCCTTC
T ss_pred HHHHHHHHcCC-HHHHHHHHHcCCCccc---cccccccccccccccccc----------cccccccccc-cccccccccC
Confidence 57899999999 9999999999999999 999999999999999999 9999999998 8899999999
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCCchhhhh--hcCCccc-ccccc
Q 039483 224 WTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKMTALHLV--HGPKGCQ-NNMLA 277 (360)
Q Consensus 224 ~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~tpLh~A--~~~~~~~-~~~L~ 277 (360)
+||||+|+.+|+.+++++|+++|+++ +..+...|+||++++ ...++.+ +++|+
T Consensus 68 ~tpLh~A~~~g~~~~v~~Ll~~ga~v-~~~~~~~~~~~~~~~~a~~~g~~eiv~~L~ 123 (130)
T d1ycsb1 68 WTPLHCAASCNNVQVCKFLVESGAAV-FAMTYSDMQTAADKCEEMEEGYTQCSQFLY 123 (130)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCSSSCCCHHHHCCSSSTTCCCHHHHHH
T ss_pred cccccccchhhHHHHHHHHHHcCCCc-ccccCCCCCCHHHHHHHHHcChHHHHHHHH
Confidence 99999999999999999999999999 776652577776655 3344455 55554
|
| >d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: 53BP2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.84 E-value=1.2e-21 Score=154.60 Aligned_cols=121 Identities=13% Similarity=0.031 Sum_probs=108.2
Q ss_pred ChHHHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHH
Q 039483 83 TRSRHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAI 162 (360)
Q Consensus 83 tp~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~L 162 (360)
++ |+.||..|+.++|++|+++|++++. +|.+|. ||||+|+..|+ .+++++|
T Consensus 3 ~l-L~~A~~~G~~~~v~~Ll~~g~d~n~------------------~d~~g~---------t~Lh~A~~~~~-~~~~~~l 53 (130)
T d1ycsb1 3 AL-LLDSSLEGEFDLVQRIIYEVDDPSL------------------PNDEGI---------TALHNAVCAGH-TEIVKFL 53 (130)
T ss_dssp HH-HHHHHHHTCHHHHHHHTSTTSSCCC------------------CCTTSC---------CHHHHHHHHTC-HHHHHHH
T ss_pred HH-HHHHHHcCCHHHHHHHHHcCCCccc------------------cccccc---------ccccccccccc-ccccccc
Confidence 45 8999999999999999999999998 888885 77888889999 9999999
Q ss_pred HhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccC-CCChHHHHH--HHcCCHHHH
Q 039483 163 LKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQ-CWWTPIHYA--AYHRNYLIL 239 (360)
Q Consensus 163 l~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~-~g~t~Lh~A--~~~~~~~~v 239 (360)
++.|++++. +|..|+||||+|+..|+. +++++|++++ ++++..+. .+.||++++ +..|+.+++
T Consensus 54 l~~g~~~~~---~d~~g~tpLh~A~~~g~~----------~~v~~Ll~~g-a~v~~~~~~~~~~~~~~~~a~~~g~~eiv 119 (130)
T d1ycsb1 54 VQFGVNVNA---ADSDGWTPLHCAASCNNV----------QVCKFLVESG-AAVFAMTYSDMQTAADKCEEMEEGYTQCS 119 (130)
T ss_dssp HHHTCCTTC---CCTTCCCHHHHHHHTTCH----------HHHHHHHHTT-CCTTCCCSSSCCCHHHHCCSSSTTCCCHH
T ss_pred ccccccccc---ccccCcccccccchhhHH----------HHHHHHHHcC-CCcccccCCCCCCHHHHHHHHHcChHHHH
Confidence 999999999 999999999999999999 9999999998 77887664 578887665 577889999
Q ss_pred HHHHhcC
Q 039483 240 KLILKID 246 (360)
Q Consensus 240 ~~Ll~~g 246 (360)
++|+..+
T Consensus 120 ~~L~~~~ 126 (130)
T d1ycsb1 120 QFLYGVQ 126 (130)
T ss_dssp HHHHHHH
T ss_pred HHHHhHH
Confidence 9998654
|
| >d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Swi6 ankyrin-repeat fragment species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.83 E-value=7.5e-22 Score=178.35 Aligned_cols=168 Identities=13% Similarity=0.113 Sum_probs=109.1
Q ss_pred ccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHH
Q 039483 129 TNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQL 208 (360)
Q Consensus 129 ~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~L 208 (360)
.|.+|+ ||||+||..|+ .+++++|+++|++++. +|..|+||||.|+..++.. .. ..+..+
T Consensus 103 ~D~~G~---------T~LH~Aa~~g~-~~~v~~Ll~~gad~~~---~d~~G~TpL~~A~~~~~~~----~~---~~~~~l 162 (301)
T d1sw6a_ 103 VDEHGN---------TPLHWLTSIAN-LELVKHLVKHGSNRLY---GDNMGESCLVKAVKSVNNY----DS---GTFEAL 162 (301)
T ss_dssp CSTTCC---------CHHHHHHHTTC-HHHHHHHHHTTCCTTB---CCTTCCCHHHHHHHSSHHH----HT---TCHHHH
T ss_pred cCCCCC---------CHHHHHHHcCC-HHHHHHHHHCCCCCCc---CCcccccHHHHhhhcccch----hh---hhHHHH
Confidence 478885 88888899999 9999999999999999 9999999999999876410 00 222333
Q ss_pred HhcCccccccccCCCChHHHHHHHcCC----HH--------HHHHHHhcCCccccccccCCCCchhhhhhcCCccc----
Q 039483 209 FEGKKSMIKGIDQCWWTPIHYAAYHRN----YL--------ILKLILKIDRTAAKIADKDRKMTALHLVHGPKGCQ---- 272 (360)
Q Consensus 209 l~~~~~~i~~~d~~g~t~Lh~A~~~~~----~~--------~v~~Ll~~g~~~~~~~d~~~g~tpLh~A~~~~~~~---- 272 (360)
+......+...|..|+||||.++..+. .. ++.++++.+......... .+.++++.+.......
T Consensus 163 l~~l~~~~~~~d~~g~t~lh~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 241 (301)
T d1sw6a_ 163 LDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTN-EKESKPNDKNGERKDSILEN 241 (301)
T ss_dssp HHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-----------------CHHHHH
T ss_pred HHHHhhhhhhcccccCCHHHHHHHHhCccccHHHHHHHHHHHHHHHHhcCCcchhcccc-cccchhHHHHhcchHHHHHH
Confidence 333224467788999999999886543 22 344555555444244444 5666666664443333
Q ss_pred --ccccccccCccCCCCCCcHHHHHHHcCCHHHHHHHhhhhccccCC
Q 039483 273 --NNMLASSLMDEGDAKGNTTVHFFAAVHRKEIFDDLSGRVKATMRP 317 (360)
Q Consensus 273 --~~~L~~~~~~~~d~~g~Tpl~~A~~~~~~~i~~~l~~~~~~~~~p 317 (360)
...+++..+|.+|..|+||||+|++.|+.++++.|++..-....+
T Consensus 242 ~~~~~~~~~~in~~D~~G~TpLh~A~~~g~~~iv~~Ll~~GAd~~~~ 288 (301)
T d1sw6a_ 242 LDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIA 288 (301)
T ss_dssp CSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCC
T ss_pred HhhHHHHhcCccCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC
Confidence 222334668899999999999999999999999999875444444
|
| >d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Pseudo ankyrin repeat-like family: Pseudo ankyrin repeat domain: Hypothetical protein LPG2416 species: Legionella pneumophila [TaxId: 446]
Probab=99.82 E-value=1e-22 Score=187.70 Aligned_cols=195 Identities=12% Similarity=0.024 Sum_probs=143.6
Q ss_pred ccccCCCCCCCCChHHHHHHhcCCHHHHHH---HHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHH
Q 039483 71 QKMCQPVTAKGDTRSRHVAAKFDHCDIVSV---LIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLC 147 (360)
Q Consensus 71 ~~~~~~~~~~g~tp~Lh~A~~~g~~~~v~~---Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~ 147 (360)
..+ ..++.+|.|| ||+||..||.+++++ |++.|++++. +|.+| +||||
T Consensus 81 ~~~-~~~~~~~~t~-L~~Aa~~g~~~~~~~~~~L~~~~~~in~------------------~~~~g---------~taL~ 131 (346)
T d2ajaa1 81 SDA-HKKGIKSEVI-CFVAAITGCSSALDTLCLLLTSDEIVKV------------------IQAEN---------YQAFR 131 (346)
T ss_dssp HHH-HHHTCCHHHH-HHHHHHHCCHHHHHHHTTC--CCSSCC--------------------CHHH---------HHHHH
T ss_pred hHH-HhccCCCCcH-HHHHHHhCCHHHHHHHHHHHhCCCcccc------------------cCCCC---------CCHHH
Confidence 345 6678889999 999999999887665 7899999988 67776 48889
Q ss_pred HHHhcCCcHHHHHHHHhhCCCCCccccCC--CCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCcc--ccccccCCC
Q 039483 148 MAAEYEHSSHTVVAILKSCTSVSHIYMKA--PMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKS--MIKGIDQCW 223 (360)
Q Consensus 148 ~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d--~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~--~i~~~d~~g 223 (360)
+||..|+ .+++++|++.|++++. .+ ..|.||||+|+..|+. +++++|++.++. ..+..+..+
T Consensus 132 ~Aa~~G~-~~~v~~Ll~~g~~~~~---~~~~~~g~t~L~~Aa~~g~~----------~iv~~Ll~~~~~~~~~~~~~~~~ 197 (346)
T d2ajaa1 132 LAAENGH-LHVLNRLCELAPTEIM---AMIQAENYHAFRLAAENGHL----------HVLNRLCELAPTEATAMIQAENY 197 (346)
T ss_dssp HHHHTTC-HHHHHHHHHSCTTTHH---HHHSHHHHHHHHHHHHTTCH----------HHHHHHHHSCGGGHHHHHHHHHH
T ss_pred HHHHCCC-HHHHHHHHHcCCCccc---cccccCCCChhHHHHHHhhH----------HHHHHHHHcCCcccccccccCCC
Confidence 9999999 9999999999999887 54 4689999999999999 999999998833 233445667
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcCCccccccccCCCC-------chhhhhhcCCccc-cccccc----ccCccCCC-----
Q 039483 224 WTPIHYAAYHRNYLILKLILKIDRTAAKIADKDRKM-------TALHLVHGPKGCQ-NNMLAS----SLMDEGDA----- 286 (360)
Q Consensus 224 ~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~d~~~g~-------tpLh~A~~~~~~~-~~~L~~----~~~~~~d~----- 286 (360)
.||+|.|+.+|+.+++++|++.|+++ +..+. .+. ++++.+...+..+ ...+.. ...+..+.
T Consensus 198 ~t~l~~A~~~g~~~iv~~Ll~~ga~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~ 275 (346)
T d2ajaa1 198 YAFRWAAVGRGHHNVINFLLDCPVML-AYAEI-HEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQ 275 (346)
T ss_dssp HHHHHHHSTTCCHHHHHHHTTSHHHH-HHHHH-CTTTTTTTTHHHHHHHHHHHHHHHHTTTTTTSSSSCCCCSSHHHHHH
T ss_pred cchhhHHhhcCHHHHHHHHHhCCCCc-chHHH-HHHHcCcHhhhHHHHHhhccchHHHHHHHHhcccccHhHHhcccccc
Confidence 78889999999999999999999887 54444 333 3333332222222 111211 12222222
Q ss_pred --CCCcHHHHHHHcCCHHHHHHHhhh
Q 039483 287 --KGNTTVHFFAAVHRKEIFDDLSGR 310 (360)
Q Consensus 287 --~g~Tpl~~A~~~~~~~i~~~l~~~ 310 (360)
.+.++++.|+..++.++++.|.+.
T Consensus 276 ~~~~~~~l~~a~~~~~ld~v~~Ll~~ 301 (346)
T d2ajaa1 276 GFYMLRNLIRRNDEVLLDDIRFLLSI 301 (346)
T ss_dssp HHHHHHHHHHHCCGGGHHHHHHHHTS
T ss_pred cchhhhHHHHHhcCChHHHHHHHHhC
Confidence 345789999999999999988875
|
| >d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Pyk2-associated protein beta species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.82 E-value=9.3e-20 Score=147.80 Aligned_cols=126 Identities=10% Similarity=0.092 Sum_probs=107.9
Q ss_pred HHHHHHHcCChHHHHHHHHHHHhhhhcccCCccccccccccccccccCCCCCCCCChHHHHHHhc---CCHHHHHHHHHh
Q 039483 28 NLFKVAAAGNLEPFKDMAREVIESLLTARSRTQSCISTSNCRRQKMCQPVTAKGDTRSRHVAAKF---DHCDIVSVLIER 104 (360)
Q Consensus 28 ~L~~Aa~~G~~~~~~~ll~~~~~~~~~~~~~t~~~v~l~~~~~~~~~~~~~~~g~tp~Lh~A~~~---g~~~~v~~Ll~~ 104 (360)
.|+.|++++|+..+..++..+.+.. . +... ...+..|+|| ||+|++. |+.++|++|+++
T Consensus 9 ~L~~Av~~~dl~~l~~~~~~g~d~~---------------~-~~~~-~~~~~~g~t~-Lh~A~~~~~~~~~~iv~~Ll~~ 70 (154)
T d1dcqa1 9 SLCEAVKTRDIFGLLQAYADGVDLT---------------E-KIPL-ANGHEPDETA-LHLAVRSVDRTSLHIVDFLVQN 70 (154)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTT---------------S-BCCC-SSCSSTTCBH-HHHHHHHCCTTTHHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHcCCCcC---------------C-CCCc-ccCCCCCCch-HHHHHHhcCCCCHHHHHHHHHc
Confidence 4789999999999998887433221 0 2233 4557789999 9999975 679999999999
Q ss_pred ccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHhcCCcHHHHHHHHhhCCCCCccccCCCCCCcHHH
Q 039483 105 AKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAEYEHSSHTVVAILKSCTSVSHIYMKAPMERQALH 184 (360)
Q Consensus 105 g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~~g~~~~~~~~Ll~~g~~~~~~~~~d~~g~t~Lh 184 (360)
|++++. +|..|+ ||||+|+..|+ .+++++|+++|++++. +|..|.||||
T Consensus 71 gadin~------------------~d~~g~---------TpLh~A~~~~~-~~~v~~Ll~~gad~~~---~d~~g~tpL~ 119 (154)
T d1dcqa1 71 SGNLDK------------------QTGKGS---------TALHYCCLTDN-AECLKLLLRGKASIEI---ANESGETPLD 119 (154)
T ss_dssp CSCTTC------------------CCTTCC---------CHHHHHHHTTC-HHHHHHHHHTTCCTTC---CCTTSCCHHH
T ss_pred CCChhh------------------hhhhhc---------ccccccccccc-ccccccccccCccccc---cCCCCCCHHH
Confidence 999988 888885 78888899999 9999999999999999 9999999999
Q ss_pred HHHhcCCcccccccCChHHHHHHHHhcC
Q 039483 185 AATMHIDLCKFNHTLSNDCAVQQLFEGK 212 (360)
Q Consensus 185 ~A~~~~~~~~~~~~~~~~~~~~~Ll~~~ 212 (360)
+|++.|+. +++++|++.+
T Consensus 120 ~A~~~~~~----------~i~~~L~~~~ 137 (154)
T d1dcqa1 120 IAKRLKHE----------HCEELLTQAL 137 (154)
T ss_dssp HHHHTTCH----------HHHHHHHHHH
T ss_pred HHHHcCCH----------HHHHHHHHhC
Confidence 99999999 9999999876
|
| >d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Pyk2-associated protein beta species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.81 E-value=1.9e-19 Score=145.92 Aligned_cols=128 Identities=13% Similarity=0.064 Sum_probs=108.8
Q ss_pred HHHHHhcCCHHHHHHHHHhccccCcccccccccchhhHHHhhcccCCCCchHHHhhhcCHHHHHHh---cCCcHHHHHHH
Q 039483 86 RHVAAKFDHCDIVSVLIERAKLVQHEDEELESGVGASRQMIRMTNKEKHTTLHEAYNKIPLCMAAE---YEHSSHTVVAI 162 (360)
Q Consensus 86 Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~l~~~d~~g~t~Lh~a~~~t~L~~A~~---~g~~~~~~~~L 162 (360)
|+.|++.++...+..++..|.+++.. ......+..|+ ||||+|+. .+. .+++++|
T Consensus 10 L~~Av~~~dl~~l~~~~~~g~d~~~~------------~~~~~~~~~g~---------t~Lh~A~~~~~~~~-~~iv~~L 67 (154)
T d1dcqa1 10 LCEAVKTRDIFGLLQAYADGVDLTEK------------IPLANGHEPDE---------TALHLAVRSVDRTS-LHIVDFL 67 (154)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTSB------------CCCSSCSSTTC---------BHHHHHHHHCCTTT-HHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHcCCCcCCC------------CCcccCCCCCC---------chHHHHHHhcCCCC-HHHHHHH
Confidence 67888999999999999999887651 11112456676 55666665 356 8999999
Q ss_pred HhhCCCCCccccCCCCCCcHHHHHHhcCCcccccccCChHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHH
Q 039483 163 LKSCTSVSHIYMKAPMERQALHAATMHIDLCKFNHTLSNDCAVQQLFEGKKSMIKGIDQCWWTPIHYAAYHRNYLILKLI 242 (360)
Q Consensus 163 l~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~L 242 (360)
+++|++++. +|..|+||||+|+..|+. +++++|++++ ++++.+|..|+||||+|+..|+.+++++|
T Consensus 68 l~~gadin~---~d~~g~TpLh~A~~~~~~----------~~v~~Ll~~g-ad~~~~d~~g~tpL~~A~~~~~~~i~~~L 133 (154)
T d1dcqa1 68 VQNSGNLDK---QTGKGSTALHYCCLTDNA----------ECLKLLLRGK-ASIEIANESGETPLDIAKRLKHEHCEELL 133 (154)
T ss_dssp HHHCSCTTC---CCTTCCCHHHHHHHTTCH----------HHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHcCCChhh---hhhhhccccccccccccc----------cccccccccC-ccccccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 999999999 999999999999999999 9999999998 88999999999999999999999999999
Q ss_pred HhcCCcc
Q 039483 243 LKIDRTA 249 (360)
Q Consensus 243 l~~g~~~ 249 (360)
++.+...
T Consensus 134 ~~~~~~~ 140 (154)
T d1dcqa1 134 TQALSGR 140 (154)
T ss_dssp HHHHTTC
T ss_pred HHhCCCC
Confidence 9876544
|