Citrus Sinensis ID: 039505

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340--
Protein Sequence
MEMFQQFVSLCLCIFHLAALVYAEHEAGSSYTEASTKLKYISDTNYIETGLAKSILLQHRRAKQQQVWSLRSFPDGIRNCYRFNLTRDSKYLIRTTFIHGNYDEQNILPDFKPVPKFLSQLSSLKFLKRNLGRNKLTGPLPVELIGKQKNNALELSLRVTNNFERVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGHVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTHMSTTIAGTAGFLNTKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNGSRITIK
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHccEEEEEcccccccccccccEEEEccccHHccccccEEccccccHHHHHcccccccccccccEEEEcccccccEEEEEEEEccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccHHHHHHHcccccEEEEEccccEEEEEEEcccEEEEEEccccccccccccEEEEEcHHHHHHHHHHHHHcccccccEEEcccccccccccccccccccccccEEEEEEEcccccccccccEEEEccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccHHHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHHcccccccccccccccEEEcccHHHcccccccccHHHccHccccccEEcccccccccEEEEEcccccEEEEEEEEEEcccccccccccccccccccEEEccccccccccccccccccccHHHccccccEcHHHHHHHHcccHHEEccccccEEEEEEEcccEEEEEEcccccccccHHEccHHHHHHHHHHHHHHHHHHccccccEEEEcccccHEEEccccEEEEEcccccEEEEEcccccccccHHHHccccccccccEEEEEEEEcccHcccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MEMFQQFVSLCLCIFHLAALVYAeheagssyteastklkyisdtnyIETGLAKSILLQHRRAKQQQVWSlrsfpdgirncyrfnltrdsKYLIRTTFihgnydeqnilpdfkpvpkfLSQLSSLKFLKRnlgrnkltgplpveligkqknNALELSLRVTnnfervpykggfiTVYHGQLVKSEVAMkmlspsssqghvpivecHVGALITIPKEGLEYLHQGlkhpiiqrdMKSTNILlneksrispveggthmsttiagtagflntknpvisksiengnshlrdkstvdlsfkgefdiISVGKAVEIAMASVSskvnrrplMNQVVMVREqgngsritik
Flexible Loop (DISEMBL)
MEMFQQFVSLCLCIFHLAALVYAEHEAGSSYTEASTKLKYISDTNYIETGLAKSILLQHRRAKQQQvwslrsfpdgirNCYRFNLTRDSKYLIRTTFIHGNYDEQNILPDFKPVPKFLSQLSSLKFLKrnlgrnkltgplpveligkqknNALELSLRVTNNFERVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGHVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTHMSTTIAGTAGFLNTKNPVISKSiengnshlrdkstvdlsFKGEFDIISVGKAVEIAMASvsskvnrrplmnqvvmvreqgngsritik
Low Complexity Region (SEG)
MEMFQQFVSLCLCIFHLAALVYAEHEAGSSYTEASTKLKYISDTNYIETGLAKSILLQHRRAKQQQVWSLRSFPDGIRNCYRFNLTRDSKYLIRTTFIHGNYDEQNILPDFKPVPkflsqlsslkflkRNLGRNKLTGPLPVELIGKQKNNALELSLRVTNNFERVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGHVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTHMSTTIAGTAGFLNTKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNGSRITIK
Disordered region (IsUnstruct)
***FQQFVSLCLCIFHLAALVYAEHEAGSSYTEASTKLKYISDTNYIETGLAKSILLQHRRAKQQQVWSLRSFPDGIRNCYRFNLTRDSKYLIRTTFIHGNYDEQNILPDFKPVPKFLSQLSSLKFLKRNLGRNKLTGPLPVELIGKQKNNALELSLRVTNNFERVPYKGGFITVYHGQLVKSEVAMK********GHVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLN**************STTIAGTAGFLNTKNPV****************TVDLSFKGEFDIISVGKAVEIAMASV****************************
Disordered Region (DISOPRED)
***FQQFVSLCLCIFHLAALVYAEHEAGSSYTEASTKLKYISDTNYIETGLAKSILLQHRRAKQQQVWSLRSFPDGIRNCYRFNLTRDSKYLIRTTFIHGNYDEQNILPDFKPVPKFLSQLSSLKFLKRNLG***********LIGKQKNNALELSLRVTNNFERVPYKGGFITVYHGQLVKSEVAMKMLS**********VECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTHMSTTIAGTAGFLNTKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQG*G******
Disordered Region (DISEMBL)
MEMFQQFVSLCLCIFHLAALVYAEHEAGSSYTEASTKLKYISDTNYIETGLAKSILL*********VWSLRSFPDGIRNCYRFNLTRDSKYLIRTTFIHGNYDEQNILPDFKPVPKFLSQLSSLKFLKRNLGRNKLTGPLPVELIGKQKNNALELSLRVTNNFERVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGHVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTHMSTTIAGTAGFLNTKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQ*********
Disordered Region (DISPRO)
**MFQQFVSLCLCIFHLAALVYAEHEAGSSYTEASTKLKYISDTNYIETGLAKSILLQHRRAKQQQVWSLRSFPDGIRNCYRFNLTRDSKYLIRTTFIHGNYDEQNILPDFKPVPKFLSQLSSLKF******************IGKQKNNALELSLRVTNNFERVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGHVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTHMSTTIAGTAGFLNTKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNGSRI***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEMFQQFVSLCLCIFHLAALVYAEHEAGSSYTEASTKLKYISDTNYIETGLAKSILLQHRRAKQQQVWSLRSFPDGIRNCYRFNLTRDSKYLIRTTFIHGNYDEQNILPDFKPVPKFLSQLSSLKFLKRNLGRNKLTGPLPVELIGKQKNNALELSLRVTNNFERVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGHVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTHMSTTIAGTAGFLNTKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNGSRITIK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	342	2.2.26 [Sep-21-2011]
C0LGG4	890	Probable LRR receptor-lik	yes	no	0.584	0.224	0.299	1e-23
C0LGG6	876	Probable LRR receptor-lik	no	no	0.309	0.121	0.440	1e-21
Q9FZB1	872	Probable LRR receptor-lik	no	no	0.687	0.269	0.287	2e-21
O64556	877	Putative leucine-rich rep	no	no	0.599	0.233	0.302	2e-20
O65924	881	Putative leucine-rich rep	no	no	0.502	0.195	0.305	5e-20
C0LGQ7	898	Probable LRR receptor-lik	no	no	0.535	0.203	0.297	9e-19
Q9SI06	892	Putative leucine-rich rep	no	no	0.596	0.228	0.290	4e-18
C0LGD6	852	Probable LRR receptor-lik	no	no	0.523	0.210	0.292	7e-18
C0LGL4	880	Probable LRR receptor-lik	no	no	0.497	0.193	0.301	2e-17
Q9FZB8	871	Probable LRR receptor-lik	no	no	-0.05	-0.02	0.452	4e-17

>sp|C0LGG4|Y1518_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2

 Score =  110 bits (276), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 133/317 (41%), Gaps = 117/317 (36%)

Query: 128 KRNLGRNKLTGPLPV---------------ELIGKQKNNALELSLRVTNNFERVPYKGGF 172
           ++N+  +K  GP P+                +I +++       L++TNNFERV  KGGF
Sbjct: 536 RKNVKAHKSPGPPPLVTPGIVKSETRSSNPSIITRERKITYPEVLKMTNNFERVLGKGGF 595

Query: 173 ITVYHGQLVKSEVAMKMLSPSSSQGHVPI---VEC-------HVGALITIPKEG------ 216
            TVYHG L  +EVA+KMLS SS+QG+      VE        H+  L+    +G      
Sbjct: 596 GTVYHGNLDGAEVAVKMLSHSSAQGYKEFKAEVELLLRVHHRHLVGLVGYCDDGDNLALI 655

Query: 217 LEYL-------------------------------------HQGLKHPIIQRDMKSTNIL 239
            EY+                                     H G + P++ RD+K+TNIL
Sbjct: 656 YEYMANGDLRENMSGKRGGNVLTWENRMQIAVEAAQGLEYLHNGCRPPMVHRDVKTTNIL 715

Query: 240 LNEK----------SRISPVEGGTHMSTTIAGTAGFLN---------------------- 267
           LNE+          SR  P++G  H+ST +AGT G+L+                      
Sbjct: 716 LNERCGAKLADFGLSRSFPIDGECHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVL 775

Query: 268 ----TKNPVISKSIENGNSHLRD-----------KSTVDLSFKGEFDIISVGKAVEIAMA 312
               T  PVI K+ E    H+ D           KS VD    G++D     K VE+A+A
Sbjct: 776 LEIVTNQPVIDKTRE--RPHINDWVGFMLTKGDIKSIVDPKLMGDYDTNGAWKIVELALA 833

Query: 313 SVSSKVNRRPLMNQVVM 329
            V+   NRRP M  VVM
Sbjct: 834 CVNPSSNRRPTMAHVVM 850

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|C0LGG6|Y5189_ARATH Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2

 Score =  104 bits (259), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 52/118 (44%), Positives = 71/118 (60%), Gaps = 12/118 (10%)

Query: 6   QFVSLCLCIFHLAALVYAEHEAGS------------SYTEASTKLKYISDTNYIETGLAK 53
           +F+S  + +F +  LV A+ ++G             +Y E ST + Y SD  YI++G+  
Sbjct: 2   RFLSFLIFVFAVLGLVQAQDQSGFISLDCGLVPTEITYVEKSTNITYRSDATYIDSGVPG 61

Query: 54  SILLQHRRAKQQQVWSLRSFPDGIRNCYRFNLTRDSKYLIRTTFIHGNYDEQNILPDF 111
            I   +R   QQQ+W+LRSFP+G RNCY F+LT   KYLIR TFI+GNYD  N LP F
Sbjct: 62  KINEVYRTQFQQQIWALRSFPEGQRNCYNFSLTAKRKYLIRGTFIYGNYDGLNQLPSF 119

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FZB1|Y5188_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1

 Score =  103 bits (256), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 147/344 (42%), Gaps = 109/344 (31%)

Query: 89  SKYLIRTTFIHGNYDEQNILPDFKPVPKFLSQLSSLKFL----KRNLGRNKLTGPLPVEL 144
           SK + +T  + G   +  ++P    V    + L  L       ++N   NK T P    +
Sbjct: 493 SKTVTKTVTLKGKSKKVPMIPIVASVAGVFALLVILAIFFVVRRKNGESNKGTNP---SI 549

Query: 145 IGKQKNNALELSLRVTNNFERVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGHVP---- 200
           I K++       L++TNNFERV  KGGF TVYHG L  ++VA+KMLS SS+QG+      
Sbjct: 550 ITKERRITYPEVLKMTNNFERVLGKGGFGTVYHGNLEDTQVAVKMLSHSSAQGYKEFKAE 609

Query: 201 ---IVECH---VGALITIPKEG------LEYL---------------------------- 220
              ++  H   +  L+    +G       EY+                            
Sbjct: 610 VELLLRVHHRNLVGLVGYCDDGDNLALIYEYMANGDLKENMSGKRGGNVLTWENRMQIAV 669

Query: 221 --HQGLKH-------PIIQRDMKSTNILLNEK----------SRISPVEGGTHMSTTIAG 261
              QGL++       P++ RD+K+TNILLNE+          SR  PV+G +H+ST +AG
Sbjct: 670 EAAQGLEYLHNGCTPPMVHRDVKTTNILLNERYGAKLADFGLSRSFPVDGESHVSTVVAG 729

Query: 262 TAGFLN--------------------------TKNPVISKSIENGNSHLRD--------- 286
           T G+L+                          T  PV  K+ E   +H+ +         
Sbjct: 730 TPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVTDKTRE--RTHINEWVGSMLTKG 787

Query: 287 --KSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVV 328
             KS +D    G++D     K VE+A+A V+   NRRP M  VV
Sbjct: 788 DIKSILDPKLMGDYDTNGAWKIVELALACVNPSSNRRPTMAHVV 831

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O64556|Y2923_ARATH Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g19230 OS=Arabidopsis thaliana GN=At2g19230 PE=2 SV=3

 Score =  100 bits (249), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 125/311 (40%), Gaps = 106/311 (34%)

Query: 117 FLSQLSSLKFLKRNLGRNKLTGPLPVELIGKQKNNALELSLRVTNNFERVPYKGGFITVY 176
            L+ +S  +F KR   ++  TGPL  +   K         + +TNNFERV  +GGF  VY
Sbjct: 532 LLALISFWQFKKRQ--QSVKTGPLDTKRYYKYSE-----IVEITNNFERVLGQGGFGKVY 584

Query: 177 HGQLVKSEVAMKMLSPSSSQGH-------------------VPIVECHVGALITIPKE-- 215
           +G L   +VA+KMLS SS+QG+                     I  CH G  + +  E  
Sbjct: 585 YGVLRGEQVAIKMLSKSSAQGYKEFRAEVELLLRVHHKNLIALIGYCHEGDQMALIYEYI 644

Query: 216 -------------------------------GLEYLHQGLKHPIIQRDMKSTNILLNEK- 243
                                          GLEYLH G K PI+ RD+K TNIL+NEK 
Sbjct: 645 GNGTLGDYLSGKNSSILSWEERLQISLDAAQGLEYLHNGCKPPIVHRDVKPTNILINEKL 704

Query: 244 ---------SRISPVEGGTHMSTTIAGTAGFLN--------------------------T 268
                    SR   +EG + +ST +AGT G+L+                          T
Sbjct: 705 QAKIADFGLSRSFTLEGDSQVSTEVAGTIGYLDPEHYSMQQFSEKSDVYSFGVVLLEVIT 764

Query: 269 KNPVISKSIENGNSHLRD-----------KSTVDLSFKGEFDIISVGKAVEIAMASVSSK 317
             PVIS+S    N H+ D           KS VD      F+     K  E+A+A  S  
Sbjct: 765 GQPVISRSRTEENRHISDRVSLMLSKGDIKSIVDPKLGERFNAGLAWKITEVALACASES 824

Query: 318 VNRRPLMNQVV 328
              R  M+QVV
Sbjct: 825 TKTRLTMSQVV 835

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O65924|Y2921_ARATH Putative leucine-rich repeat receptor-like protein kinase At2g19210 OS=Arabidopsis thaliana GN=At2g19210 PE=3 SV=1

 Score = 99.0 bits (245), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 109/272 (40%), Gaps = 100/272 (36%)

Query: 157 LRVTNNFERVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGH------------------ 198
           ++VTNNFERV  +GGF  VYHG L   +VA+K+LS SS+QG+                  
Sbjct: 572 VKVTNNFERVLGQGGFGKVYHGVLNDDQVAVKILSESSAQGYKEFRAEVELLLRVHHKNL 631

Query: 199 -VPIVECHVGALITIPKE---------------------------------GLEYLHQGL 224
              I  CH G  + +  E                                 GLEYLH G 
Sbjct: 632 TALIGYCHEGKKMALIYEFMANGTLGDYLSGEKSYVLSWEERLQISLDAAQGLEYLHNGC 691

Query: 225 KHPIIQRDMKSTNILLNEK----------SRISPVEGGTHMSTTIAGTAGFLN------- 267
           K PI+QRD+K  NIL+NEK          SR   ++G    +T +AGT G+L+       
Sbjct: 692 KPPIVQRDVKPANILINEKLQAKIADFGLSRSVALDGNNQDTTAVAGTIGYLDPEYHLTQ 751

Query: 268 -------------------TKNPVISKSIENG-NSHLRD-----------KSTVDLSFKG 296
                              +  PVI++S     N H+ D           +  VD     
Sbjct: 752 KLSEKSDIYSFGVVLLEVVSGQPVIARSRTTAENIHITDRVDLMLSTGDIRGIVDPKLGE 811

Query: 297 EFDIISVGKAVEIAMASVSSKVNRRPLMNQVV 328
            FD  S  K  E+AMA  SS    RP M+ VV
Sbjct: 812 RFDAGSAWKITEVAMACASSSSKNRPTMSHVV 843

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGQ7|Y4245_ARATH Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1

 Score = 94.7 bits (234), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 122/286 (42%), Gaps = 103/286 (36%)

Query: 144 LIGKQKNNALELSLRVTNNFERVPYKGGFITVYHGQLVKSE-VAMKMLSPSSSQG----- 197
           ++  +++   E    +TNNFER   +GGF  VYHG +  +E VA+K+LS SS+QG     
Sbjct: 574 MVANKRSYTYEEVAVITNNFERPLGEGGFGVVYHGNVNDNEQVAVKVLSESSAQGYKQFK 633

Query: 198 ----------HVPIVE----CHVGALITIPKE---------------------------- 215
                     H+ +V     C  G  + +  E                            
Sbjct: 634 AEVDLLLRVHHINLVTLVGYCDEGQHLVLIYEYMSNGNLKQHLSGENSRSPLSWENRLRI 693

Query: 216 ------GLEYLHQGLKHPIIQRDMKSTNILLNEK----------SRISPVEGGTHMSTTI 259
                 GLEYLH G K P+I RD+KS NILL+            SR  PV   TH+ST +
Sbjct: 694 AAETAQGLEYLHIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLSRSFPVGSETHVSTNV 753

Query: 260 AGTAGFLN--------------------------TKNPVISKSIENGNSHLRD------- 286
           AG+ G+L+                          T  PVI ++ E   SH+ +       
Sbjct: 754 AGSPGYLDPEYYRTNWLTEKSDVFSFGVVLLEIITSQPVIDQTRE--KSHIGEWVGFKLT 811

Query: 287 ----KSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVV 328
               K+ VD S  G++D  S+ KA+E+AM+ VS   + RP M+QV 
Sbjct: 812 NGDIKNIVDPSMNGDYDSSSLWKALELAMSCVSPSSSGRPNMSQVA 857

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SI06|Y5573_ARATH Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g04300 OS=Arabidopsis thaliana GN=At2g04300 PE=3 SV=2

 Score = 92.8 bits (229), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 133/310 (42%), Gaps = 106/310 (34%)

Query: 124 LKFLKRNLGRNKLTG---PLPVELIGKQKNNALELSLRVTNNFERVPYKGGFITVYHGQL 180
           L F KR   RN+++     L   +  K +       +++TNNFE++  KGGF  VYHG +
Sbjct: 542 LVFRKRKTPRNEVSRTSRSLDPTITTKNRRFTYSEVVKMTNNFEKILGKGGFGMVYHGTV 601

Query: 181 VKSE-VAMKMLSPSSSQGHVP-------IVECH---VGALITIPKEG------LEYLHQG 223
             +E VA+KMLSPSSSQG+         ++  H   +  L+    EG       EY+ +G
Sbjct: 602 NDAEQVAVKMLSPSSSQGYKEFKAEVELLLRVHHKNLVGLVGYCDEGENLSLIYEYMAKG 661

Query: 224 -------------------------------------LKHPIIQRDMKSTNILLNEK--- 243
                                                 K P++ RD+K+TNILL+E    
Sbjct: 662 DLKEHMLGNQGVSILDWKTRLKIVAESAQGLEYLHNGCKPPMVHRDVKTTNILLDEHFQA 721

Query: 244 -------SRISPVEGGTHMSTTIAGTAGFLN--------------------------TKN 270
                  SR  P+EG T + T +AGT G+L+                          T  
Sbjct: 722 KLADFGLSRSFPLEGETRVDTVVAGTPGYLDPEYYRTNWLNEKSDVYSFGIVLLEIITNQ 781

Query: 271 PVISKSIENGNSHLRD-----------KSTVDLSFKGEFDIISVGKAVEIAMASVSSKVN 319
            VI++S E    H+ +           KS +D  F G++D  SV +AVE+AM+ V+    
Sbjct: 782 HVINQSRE--KPHIAEWVGVMLTKGDIKSIIDPKFSGDYDAGSVWRAVELAMSCVNPSST 839

Query: 320 RRPLMNQVVM 329
            RP M+QVV+
Sbjct: 840 GRPTMSQVVI 849

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGD6|Y1570_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g05700 OS=Arabidopsis thaliana GN=At1g05700 PE=2 SV=1

 Score = 91.7 bits (226), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 120/284 (42%), Gaps = 105/284 (36%)

Query: 157 LRVTNNFERVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGH----------VPIVECHV 206
           +++TNNF +V  KGGF TVYHG     +VA+K+LS +S+QG           V +   ++
Sbjct: 566 IKMTNNFGQVLGKGGFGTVYHGFYDNLQVAVKLLSETSAQGFKEFRSEVEVLVRVHHVNL 625

Query: 207 GALITIPKE------------------------------------------GLEYLHQGL 224
            ALI    E                                          GLEYLH G 
Sbjct: 626 TALIGYFHEGDQMGLIYEFMANGNMADHLAGKYQHTLSWRQRLQIALDAAQGLEYLHCGC 685

Query: 225 KHPIIQRDMKSTNILLNEKSRISPVEGG----------THMSTTIAGTAGF--------- 265
           K PI+ RD+K++NILLNEK+R    + G          +H+ST +AGT G+         
Sbjct: 686 KPPIVHRDVKTSNILLNEKNRAKLADFGLSRSFHTESRSHVSTLVAGTPGYLDPLCFETN 745

Query: 266 -LNTKNPVIS---------------KSIENGNSHLRD------------KSTVDLSFKGE 297
            LN K+ + S               K  +    H+ D             + +D     +
Sbjct: 746 GLNEKSDIYSFGVVLLEMITGKTVIKESQTKRVHVSDWVISILRSTNDVNNVIDSKMAKD 805

Query: 298 FDIISVGKAVEIAMASVSSKVNRRPLMNQVV------MVREQGN 335
           FD+ SV K VE+A++SVS  V+ RP M  +V      + RE+ N
Sbjct: 806 FDVNSVWKVVELALSSVSQNVSDRPNMPHIVRGLNECLQREESN 849

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGL4|Y2289_ARATH Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1

 Score = 90.5 bits (223), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 117/269 (43%), Gaps = 99/269 (36%)

Query: 159 VTNNFERVPYKGGFITVYHGQLVKSE-VAMKMLSPSSSQG---------------HVPIV 202
           +T+NFERV  +GGF  VYHG L  ++ +A+K+LS SS QG               HV +V
Sbjct: 571 LTDNFERVLGEGGFGVVYHGILNGTQPIAVKLLSQSSVQGYKEFKAEVELLLRVHHVNLV 630

Query: 203 E----C--------------------HVGA--------------LITIPKEGLEYLHQGL 224
                C                    H+                ++    +GLEYLH G 
Sbjct: 631 SLVGYCDEESNLALLYEYAPNGDLKQHLSGERGGSPLKWSSRLKIVVETAQGLEYLHTGC 690

Query: 225 KHPIIQRDMKSTNILLNEK----------SRISPVEGGTHMSTTIAGTAGFLN------- 267
           K P++ RD+K+TNILL+E           SR  PV G TH+ST +AGT G+L+       
Sbjct: 691 KPPMVHRDVKTTNILLDEHFQAKLADFGLSRSFPVGGETHVSTAVAGTPGYLDPEYYRTN 750

Query: 268 -------------------TKNPVISKSIENGN-----SHLRDK----STVDLSFKGEFD 299
                              T  PVI ++ E  +      ++  K    + VD     +++
Sbjct: 751 RLNEKSDVYSFGIVLLEIITSRPVIQQTREKPHIAAWVGYMLTKGDIENVVDPRLNRDYE 810

Query: 300 IISVGKAVEIAMASVSSKVNRRPLMNQVV 328
             SV KA+EIAM+ V+    +RP M+QV 
Sbjct: 811 PTSVWKALEIAMSCVNPSSEKRPTMSQVT 839

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FZB8|Y5181_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1

 Score = 89.4 bits (220), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 57/84 (67%)

Query: 28  GSSYTEASTKLKYISDTNYIETGLAKSILLQHRRAKQQQVWSLRSFPDGIRNCYRFNLTR 87
           GS Y E+ST L Y SD  ++++G    I  +     ++   +LR FPDG+RNC+  N+TR
Sbjct: 37  GSPYKESSTGLTYTSDDGFVQSGKIGKITKELESLYKKPERTLRYFPDGVRNCFSLNVTR 96

Query: 88  DSKYLIRTTFIHGNYDEQNILPDF 111
            +KYLI+ TF++GNYD +N++PDF
Sbjct: 97  GTKYLIKPTFLYGNYDGRNVIPDF 120

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	342
255549708	883	Nodulation receptor kinase precursor, pu	0.505	0.195	0.349	5e-27
356528892	873	PREDICTED: putative leucine-rich repeat	0.637	0.249	0.319	4e-26
255549712	884	BRASSINOSTEROID INSENSITIVE 1-associated	0.546	0.211	0.335	3e-25
255549720	533	conserved hypothetical protein [Ricinus	0.473	0.303	0.376	5e-25
297743130	1242	unnamed protein product [Vitis vinifera]	0.526	0.144	0.331	1e-24
255549714	915	BRASSINOSTEROID INSENSITIVE 1-associated	0.491	0.183	0.335	5e-23
15218052	890	putative LRR receptor-like serine/threon	0.584	0.224	0.299	7e-22
255549700	884	BRASSINOSTEROID INSENSITIVE 1-associated	0.494	0.191	0.32	8e-22
9802787	869	Putative protein kinase [Arabidopsis tha	0.584	0.230	0.293	8e-22
224589430	648	leucine-rich repeat receptor-like protei	0.5	0.263	0.326	1e-21

>gi|255549708|ref|XP_002515905.1| Nodulation receptor kinase precursor, putative [Ricinus communis] gi|223544810|gb|EEF46325.1| Nodulation receptor kinase precursor, putative [Ricinus communis]

 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 95/272 (34%), Positives = 125/272 (45%), Gaps = 99/272 (36%)

Query: 157 LRVTNNFERVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGHVP-------IVECH---V 206
           +++TNNF+R+  KGGF TVYHG L   EVA+KMLSPSS+QG+         ++  H   +
Sbjct: 578 VQITNNFQRILGKGGFGTVYHGHLDDMEVAVKMLSPSSAQGYKEFQTEVKLLLRVHHRNL 637

Query: 207 GALITIPKEG------LEYL------------------------------------HQGL 224
            +L+    EG       EY+                                    H G 
Sbjct: 638 TSLVGYCDEGNKMALIYEYMANGNLRDNLSDGNGNFLSWEERLRIALEAAQGLEYLHNGC 697

Query: 225 KHPIIQRDMKSTNILLNEK----------SRISPVEGGTHMSTTIAGTAGFLN------- 267
           K PII RD+K TNILLN K          SRI PVEGG+H+ST +AGT G+L+       
Sbjct: 698 KPPIIHRDVKPTNILLNNKFQAKLADFGLSRICPVEGGSHVSTIVAGTPGYLDPEYYATN 757

Query: 268 -------------------TKNPVISKSIENGNSHLRD-----------KSTVDLSFKGE 297
                              T  PVISK+ +   +HL             +S VD     +
Sbjct: 758 WLTEKSDVFSFGVVLLEIITSGPVISKTRDGDTTHLSQWFSSMVEKGDIQSIVDPRLGDD 817

Query: 298 FDIISVGKAVEIAMASVSSKVNRRPLMNQVVM 329
           FDI S+ K VE+AMA VS+   +RP MNQVV+
Sbjct: 818 FDINSLWKVVELAMACVSATSAQRPTMNQVVI 849

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356528892|ref|XP_003533031.1| PREDICTED: putative leucine-rich repeat receptor-like protein kinase At2g19210-like [Glycine max]

 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 113/354 (31%), Positives = 151/354 (42%), Gaps = 136/354 (38%)

Query: 114 VPKFLSQLSSLKFLKRNLGRNKLTGPLPVELIGKQKNNA------------------LEL 155
           VP FL+QL SLK L  N+G NKL+G +P +LI + KN +                  L+ 
Sbjct: 446 VPDFLTQLQSLKVL--NIGGNKLSGSIPAKLIERSKNGSLILSIVLSSISVVVSMTKLKF 503

Query: 156 SLR------------------VTNNFERVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQG 197
           S +                  +TNNFERV  KGGF TVY+G + +++VA+KMLS SS+QG
Sbjct: 504 SNKMEYVDSKKQEFSYSEVQSITNNFERVVGKGGFGTVYYGCIGETQVAVKMLSHSSTQG 563

Query: 198 ------------------HVPIV-ECHVGALITIPKE----------------------- 215
                               P++  C+ G    +  E                       
Sbjct: 564 VQQFQTEANILTRVHHRCLTPLIGYCNEGTRTALIYEYMTNGDLAEKLSGQSQTFLGWEQ 623

Query: 216 ----------GLEYLHQGLKHPIIQRDMKSTNILLNEK----------SRISPVEGGTHM 255
                     GLEYLH G K PII RD+K+ NILL+E           SRI   +G TH+
Sbjct: 624 RFQIALDSAIGLEYLHNGCKPPIIHRDVKTRNILLDENLRAKISDFGLSRIFSDDGDTHV 683

Query: 256 STTIAGTAGFL----NTKNPVISKS----------------------------IENGNSH 283
           ST IAGT G+L    NT N +  KS                            I+  +S 
Sbjct: 684 STAIAGTPGYLDPEYNTTNRLNEKSDVYSFGIVLLEIITGRTVILKAQVRTHIIKWVSSM 743

Query: 284 LRD----KSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQ 333
           L D       VD   +GE+D  +  K +++AMA V+     RP MNQVVM  +Q
Sbjct: 744 LADDGEIDGVVDTRLQGEYDSEAARKVIDVAMACVAPSSVNRPTMNQVVMELKQ 797

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255549712|ref|XP_002515907.1| BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis] gi|223544812|gb|EEF46327.1| BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]

 Score =  122 bits (305), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/289 (33%), Positives = 131/289 (45%), Gaps = 102/289 (35%)

Query: 141 PVELIGKQKNNALELSLRVTNNFERVPYKGGFITVYHGQLVK-SEVAMKMLSPSSSQGH- 198
           P+EL  K K       L++TNNFE+V  KGGF TVY+G L   ++VA+K+LS SS QG+ 
Sbjct: 557 PMEL--KNKQFTYSEVLKITNNFEKVLGKGGFGTVYYGTLADGTQVAVKILSQSSVQGYK 614

Query: 199 -----------------VPIVECHVGA-----------------------LITIPKE--- 215
                              +V C +                         L T+  E   
Sbjct: 615 EFLAEVKLLMRVHHRNLTTLVGCCIEGTNMGLIYEYMANGNLEDYLSGSNLNTLSWEARL 674

Query: 216 --------GLEYLHQGLKHPIIQRDMKSTNILLNEK----------SRISPVEGGTHMST 257
                   GLEYLH G K PI+ RD+K+TNILLN+K          SRI P +GGTH+ST
Sbjct: 675 RIALEAGQGLEYLHGGCKLPIVHRDVKTTNILLNDKFQAKISDFGLSRIFPADGGTHVST 734

Query: 258 TIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRD----- 286
            +AGT G+L+                          T  PVI+++  + NSH+       
Sbjct: 735 IVAGTPGYLDPEYYVTNWLTDKSDVYSFGVVLLEIITCRPVIAQNRNHENSHISQWVSSM 794

Query: 287 ------KSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM 329
                  S  D    GE+++ SV K VE+AM  +S+   RRP MNQVV+
Sbjct: 795 IENGDVNSIADPRLNGEYEVNSVWKIVELAMECLSTTSARRPTMNQVVI 843

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255549720|ref|XP_002515911.1| conserved hypothetical protein [Ricinus communis] gi|223544816|gb|EEF46331.1| conserved hypothetical protein [Ricinus communis]

 Score =  121 bits (303), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 90/239 (37%), Positives = 113/239 (47%), Gaps = 77/239 (32%)

Query: 157 LRVTNNFERVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQG------HVPIVEC------ 204
           L++TNN ERV  KGG+ TVYHG L   EVA+KMLSP S QG       VP+ EC      
Sbjct: 268 LKITNNLERVLGKGGYGTVYHGFLHGIEVAVKMLSPLSVQGSIQFQAEVPL-ECKLLLRV 326

Query: 205 ---HVGALITIPKEG------------------------------------------LEY 219
              ++  L+    EG                                          LEY
Sbjct: 327 HHRNLTILVGFCDEGTNMGLIYEYMVNGDLERHLSVTNTNVLSWKRRLQIAIDAAKGLEY 386

Query: 220 LHQGLKHPIIQRDMKSTNILLNEK----------SRISPVEGGTHMSTTIAGTAGFLNTK 269
           LH G + PII+RD+K++NILLN+           SR  PVEGGTH+STT+ GT G+L+  
Sbjct: 387 LHNGCRPPIIRRDVKTSNILLNDTFQAKLADFGLSRPFPVEGGTHVSTTVVGTPGYLDPD 446

Query: 270 NPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVV 328
               +  I         KS VD    G+F+I S+ KAVE A+A  S    RRP M QVV
Sbjct: 447 ALAANGDI---------KSIVDPRLTGDFNINSIWKAVETALACSSPTSARRPAMLQVV 496

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297743130|emb|CBI35997.3| unnamed protein product [Vitis vinifera]

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 126/287 (43%), Gaps = 107/287 (37%)

Query: 144 LIGKQKNNALELSLRVTNNFERVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGHVP--- 200
           L+ K++       + +TNNFE+   KGGF TVYHG L  ++VA+KM SPSS QG+     
Sbjct: 162 LVSKKQQFTYSEVITITNNFEKEVGKGGFGTVYHGHLDDTQVAVKMFSPSSIQGYKQFQA 221

Query: 201 ----IVECH---VGALITIPKEG------------------------------------- 216
               ++  H   + +LI   KEG                                     
Sbjct: 222 EAKLLMRVHHRNITSLIGYCKEGNNMGLIYEYMANGDLQRHPSGNERNTNVLSWEERLRI 281

Query: 217 -------LEYLHQGLKHPIIQRDMKSTNILLNEK----------SRISPVEGGTHMSTTI 259
                  LEYLH G K PII RD+KSTNILLNEK          SR  P EG TH+ST +
Sbjct: 282 AVETAQGLEYLHNGCKPPIIHRDIKSTNILLNEKFQAKLADFRLSRAFPNEGSTHVSTIV 341

Query: 260 AGTAGFLN---------------------------TKNPV------------ISKSIENG 280
           AGT G+L+                           +++PV            +S  + NG
Sbjct: 342 AGTRGYLDPEYHASNRLTEKSDVFSFGVVLLEIITSQSPVPGNHEETHIIQWVSSMLANG 401

Query: 281 NSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQV 327
           +     K+ VD   +G+FDI S  KAVE+AM+ V+S    RP MN V
Sbjct: 402 DI----KNIVDPRLQGDFDINSAWKAVEVAMSCVASTSTERPAMNYV 444

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255549714|ref|XP_002515908.1| BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis] gi|223544813|gb|EEF46328.1| BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]

 Score =  114 bits (286), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 92/274 (33%), Positives = 120/274 (43%), Gaps = 106/274 (38%)

Query: 157 LRVTNNFERVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGHVP-------IVECH---V 206
           L +TNNFERV  KGGF TVYHG L  ++VA+K+LSP S+QG+         ++  H   +
Sbjct: 595 LNITNNFERVLGKGGFGTVYHGYLDDTQVAVKILSPLSAQGYKEFHAEVKLLLRVHHRNL 654

Query: 207 GALITIPKEG------LEY------------------------------------LHQGL 224
            +L+    EG       EY                                    LH G 
Sbjct: 655 TSLVGFCNEGTKMGLIYEYMANGDLEHLLSGRNRHVLKWERRLDIAVEAAKGLEYLHNGC 714

Query: 225 KHPIIQRDMKSTNILLNEK----------SRISPVEGGTHMSTTIAGTAGFLN------- 267
           K PI+ RD+K+ NILLN++          S+  PVEGGTH+ST +AGT G+L+       
Sbjct: 715 KPPIVHRDIKTANILLNDQFQARLADFGLSKSFPVEGGTHVSTVVAGTPGYLDPEYSMTN 774

Query: 268 -------------------TKNPVI--------------SKSIENGNSHLRDKSTVDLSF 294
                              T  PVI              S  + NG+     K+ +D   
Sbjct: 775 WLTEKSDVYSFGVVLLKIITGRPVIAVIDERSIHISHWVSSLVANGDI----KTVIDPCL 830

Query: 295 KGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVV 328
            G+FDI SV KAVE+AMA  S     RP MNQVV
Sbjct: 831 GGDFDINSVWKAVEVAMACTSPTSAGRPTMNQVV 864

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15218052|ref|NP_175598.1| putative LRR receptor-like serine/threonine-protein kinase [Arabidopsis thaliana] gi|281185489|sp|C0LGG4.2|Y1518_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g51860; Flags: Precursor gi|332194605|gb|AEE32726.1| putative LRR receptor-like serine/threonine-protein kinase [Arabidopsis thaliana]

 Score =  110 bits (276), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 133/317 (41%), Gaps = 117/317 (36%)

Query: 128 KRNLGRNKLTGPLPV---------------ELIGKQKNNALELSLRVTNNFERVPYKGGF 172
           ++N+  +K  GP P+                +I +++       L++TNNFERV  KGGF
Sbjct: 536 RKNVKAHKSPGPPPLVTPGIVKSETRSSNPSIITRERKITYPEVLKMTNNFERVLGKGGF 595

Query: 173 ITVYHGQLVKSEVAMKMLSPSSSQGHVPI---VEC-------HVGALITIPKEG------ 216
            TVYHG L  +EVA+KMLS SS+QG+      VE        H+  L+    +G      
Sbjct: 596 GTVYHGNLDGAEVAVKMLSHSSAQGYKEFKAEVELLLRVHHRHLVGLVGYCDDGDNLALI 655

Query: 217 LEYL-------------------------------------HQGLKHPIIQRDMKSTNIL 239
            EY+                                     H G + P++ RD+K+TNIL
Sbjct: 656 YEYMANGDLRENMSGKRGGNVLTWENRMQIAVEAAQGLEYLHNGCRPPMVHRDVKTTNIL 715

Query: 240 LNEK----------SRISPVEGGTHMSTTIAGTAGFLN---------------------- 267
           LNE+          SR  P++G  H+ST +AGT G+L+                      
Sbjct: 716 LNERCGAKLADFGLSRSFPIDGECHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVL 775

Query: 268 ----TKNPVISKSIENGNSHLRD-----------KSTVDLSFKGEFDIISVGKAVEIAMA 312
               T  PVI K+ E    H+ D           KS VD    G++D     K VE+A+A
Sbjct: 776 LEIVTNQPVIDKTRE--RPHINDWVGFMLTKGDIKSIVDPKLMGDYDTNGAWKIVELALA 833

Query: 313 SVSSKVNRRPLMNQVVM 329
            V+   NRRP M  VVM
Sbjct: 834 CVNPSSNRRPTMAHVVM 850

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255549700|ref|XP_002515901.1| BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis] gi|223544806|gb|EEF46321.1| BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]

 Score =  110 bits (276), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 88/275 (32%), Positives = 122/275 (44%), Gaps = 106/275 (38%)

Query: 157 LRVTNNFERVPYKGGFITVYHGQLVK-SEVAMKMLSPSSS------QGHVPIV------- 202
           L++TNNF+++  KGGF TVYHG L   ++VA+K+LS SS+      Q  V ++       
Sbjct: 571 LKITNNFDKILGKGGFGTVYHGTLNDGTQVAVKVLSLSSAQGYKEFQAEVKLLLRVHHRN 630

Query: 203 ------ECHVGA---------------------------------LITIPKEGLEYLHQG 223
                  C+ G                                  + T   +GLEYLH G
Sbjct: 631 LTTLVGYCNEGTNLGLIYEYMANGNLEDYLSDSCLNTLSWEIRLRIATEAAQGLEYLHNG 690

Query: 224 LKHPIIQRDMKSTNILLNEK----------SRISPVEGGTHMSTTIAGTAGFLN------ 267
            K  I+ RD+K+TNILLN+K          SRI PV+G TH+ST +AGT G+L+      
Sbjct: 691 CKPQIVHRDVKTTNILLNDKFQAKLADFGLSRIFPVDGSTHISTVVAGTPGYLDPEYYVN 750

Query: 268 --------------------TKNPVISKS-------------IENGNSHLRDKSTVDLSF 294
                               T  P I+++             +E G+ H      VD   
Sbjct: 751 NWLTDKSDVFSFGVVLLEIITGRPAIAQTRERTHISQWVSSMLEKGDIH----GIVDPRL 806

Query: 295 KGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM 329
            G+F+I SV KA E+AM  VS+   RRP MNQ V+
Sbjct: 807 NGDFEINSVWKAAELAMGCVSASSARRPTMNQAVV 841

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|9802787|gb|AAF99856.1|AC015448_6 Putative protein kinase [Arabidopsis thaliana]

 Score =  110 bits (276), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 133/317 (41%), Gaps = 117/317 (36%)

Query: 128 KRNLGRNKLTGPLPV---------------ELIGKQKNNALELSLRVTNNFERVPYKGGF 172
           ++N+  +K  GP P+                +I +++       L++TNNFERV  KGGF
Sbjct: 515 RKNVKAHKSPGPPPLVTPGIVKSETRSSNPSIITRERKITYPEVLKMTNNFERVLGKGGF 574

Query: 173 ITVYHGQLVKSEVAMKMLSPSSSQGH----------VPIVECHVGALITIPKEG------ 216
            TVYHG L  +EVA+KMLS SS+QG+          + +   H+  L+    +G      
Sbjct: 575 GTVYHGNLDGAEVAVKMLSHSSAQGYKEFKAEVELLLRVHHRHLVGLVGYCDDGDNLALI 634

Query: 217 LEYL-------------------------------------HQGLKHPIIQRDMKSTNIL 239
            EY+                                     H G + P++ RD+K+TNIL
Sbjct: 635 YEYMANGDLRENMSGKRGGNVLTWENRMQIAVEAAQGLEYLHNGCRPPMVHRDVKTTNIL 694

Query: 240 LNEK----------SRISPVEGGTHMSTTIAGTAGFLN---------------------- 267
           LNE+          SR  P++G  H+ST +AGT G+L+                      
Sbjct: 695 LNERCGAKLADFGLSRSFPIDGECHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVL 754

Query: 268 ----TKNPVISKSIENGNSHLRD-----------KSTVDLSFKGEFDIISVGKAVEIAMA 312
               T  PVI K+ E    H+ D           KS VD    G++D     K VE+A+A
Sbjct: 755 LEIVTNQPVIDKTRE--RPHINDWVGFMLTKGDIKSIVDPKLMGDYDTNGAWKIVELALA 812

Query: 313 SVSSKVNRRPLMNQVVM 329
            V+   NRRP M  VVM
Sbjct: 813 CVNPSSNRRPTMAHVVM 829

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224589430|gb|ACN59249.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana]

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/273 (32%), Positives = 118/273 (43%), Gaps = 102/273 (37%)

Query: 157 LRVTNNFERVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGHVPI---VEC-------HV 206
           L++TNNFERV  KGGF TVYHG L  +EVA+KMLS SS+QG+      VE        H+
Sbjct: 338 LKMTNNFERVLGKGGFGTVYHGNLDGAEVAVKMLSHSSAQGYKEFKAEVELLLRVHHRHL 397

Query: 207 GALITIPKEG------LEYL-------------------------------------HQG 223
             L+    +G       EY+                                     H G
Sbjct: 398 VGLVGYCDDGDNLALIYEYMANGDLRENMSGKRGGNVLTWENRMQIAVEAAQGLEYLHNG 457

Query: 224 LKHPIIQRDMKSTNILLNEK----------SRISPVEGGTHMSTTIAGTAGFLN------ 267
            + P++ RD+K+TNILLNE+          SR  P++G  H+ST +AGT G+L+      
Sbjct: 458 CRPPMVHRDVKTTNILLNERCGAKLADFGLSRSFPIDGECHVSTVVAGTPGYLDPEYYRT 517

Query: 268 --------------------TKNPVISKSIENGNSHLRD-----------KSTVDLSFKG 296
                               T  PVI K+ E    H+ D           KS VD    G
Sbjct: 518 NWLSEKSDVYSFGVVLLEIVTNQPVIDKTRE--RPHINDWVGFMLTKGDIKSIVDPKLMG 575

Query: 297 EFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM 329
           ++D     K VE+A+A V+   NRRP M  VVM
Sbjct: 576 DYDTNGAWKIVELALACVNPSSNRRPTMAHVVM 608

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	342
TAIR|locus:2195850	890	AT1G51860 [Arabidopsis thalian	0.324	0.124	0.422	1.3e-40
TAIR|locus:2195830	837	AT1G51870 [Arabidopsis thalian	0.242	0.099	0.530	7.8e-39
TAIR|locus:2195855	876	AT1G51910 [Arabidopsis thalian	0.242	0.094	0.530	1.3e-37
TAIR|locus:2017557	894	IOS1 "IMPAIRED OOMYCETE SUSCEP	0.298	0.114	0.448	6.7e-36
TAIR|locus:2824870	884	AT1G51805 [Arabidopsis thalian	0.324	0.125	0.333	4.4e-33
TAIR|locus:2078196	871	AT3G46350 [Arabidopsis thalian	0.236	0.092	0.482	2.5e-30
TAIR|locus:2024987	864	AT1G07550 [Arabidopsis thalian	0.230	0.091	0.471	5.5e-29
TAIR|locus:2017572	882	AT1G51790 [Arabidopsis thalian	0.242	0.094	0.493	9.8e-29
TAIR|locus:2078191	838	AT3G46420 [Arabidopsis thalian	0.236	0.096	0.470	1.6e-28
TAIR|locus:2195825	865	AT1G51850 [Arabidopsis thalian	0.242	0.095	0.421	1.6e-28

TAIR|locus:2195850 AT1G51860 [Arabidopsis thaliana (taxid:3702)]

 Score = 235 (87.8 bits), Expect = 1.3e-40, Sum P(3) = 1.3e-40
 Identities = 52/123 (42%), Positives = 73/123 (59%)

Query:     1 MEMFQQFVSLCLCIFHLAALVYAEHEAG------------SSYTEASTKLKYISDTNYIE 48
             M+    F+ L +  F +   V A+++AG            ++YTE ST + Y SD +YI+
Sbjct:     1 MKSLHWFLHLLIIAFTVLRSVEAQNQAGFISLDCGLVPKETTYTEKSTNITYKSDVDYID 60

Query:    49 TGLAKSILLQHRRAKQQQVWSLRSFPDGIRNCYRFNLTRDSKYLIRTTFIHGNYDEQNIL 108
             +GL   I   ++   QQQVW++RSFP G RNCY  NLT ++KYLIR TF++GNYD  N  
Sbjct:    61 SGLVGKINDAYKTQFQQQVWAVRSFPVGQRNCYNVNLTANNKYLIRGTFVYGNYDGLNQF 120

Query:   109 PDF 111
             P F
Sbjct:   121 PSF 123

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2195830 AT1G51870 [Arabidopsis thaliana (taxid:3702)]

 Score = 233 (87.1 bits), Expect = 7.8e-39, Sum P(3) = 7.8e-39
 Identities = 44/83 (53%), Positives = 56/83 (67%)

Query:    29 SSYTEASTKLKYISDTNYIETGLAKSILLQHRRAKQQQVWSLRSFPDGIRNCYRFNLTRD 88
             ++Y E ST + Y SD NY ++GL   I   H+   QQ +W+LRSFP+G RNCY FNLT +
Sbjct:    41 TTYVETSTNITYKSDANYTDSGLVGKINDAHKTLVQQPLWALRSFPEGERNCYNFNLTVN 100

Query:    89 SKYLIRTTFIHGNYDEQNILPDF 111
             S YLIR TF++GNYD  N  P F
Sbjct:   101 STYLIRGTFLYGNYDGLNQSPSF 123

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2195855 AT1G51910 [Arabidopsis thaliana (taxid:3702)]

 Score = 241 (89.9 bits), Expect = 1.3e-37, Sum P(3) = 1.3e-37
 Identities = 44/83 (53%), Positives = 59/83 (71%)

Query:    29 SSYTEASTKLKYISDTNYIETGLAKSILLQHRRAKQQQVWSLRSFPDGIRNCYRFNLTRD 88
             ++YTE  T + YISD +YI++GL + I   ++   QQQ W+LRSFP+G RNCY FNL  +
Sbjct:    41 TTYTEQITNITYISDADYIDSGLTERISDSYKSQLQQQTWTLRSFPEGQRNCYNFNLKAN 100

Query:    89 SKYLIRTTFIHGNYDEQNILPDF 111
              KYLIR TF++GNYD  N +P F
Sbjct:   101 LKYLIRGTFVYGNYDGLNQMPKF 123

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2017557 IOS1 "IMPAIRED OOMYCETE SUSCEPTIBILITY 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 229 (85.7 bits), Expect = 6.7e-36, Sum P(4) = 6.7e-36
 Identities = 48/107 (44%), Positives = 65/107 (60%)

Query:     3 MFQQFVSLCLCIFHLAALVYAEHEAGS----SYTEASTKLKYISDTNYIETGLAKSILLQ 58
             + Q F +L LC+    +  +   + GS    S+ E +T + YISD N+I TG+  SI   
Sbjct:    11 LLQIFSALLLCLAQDQS-GFISLDCGSPRETSFREKTTNITYISDANFINTGVGGSIKQG 69

Query:    59 HRRAKQQQVWSLRSFPDGIRNCYRFNLTRDSKYLIRTTFIHGNYDEQ 105
             +R   QQQ W+LRSFP GIRNCY  NLT   +YLIR  F+HG YD++
Sbjct:    70 YRTQFQQQTWNLRSFPQGIRNCYTLNLTIGDEYLIRANFLHGGYDDK 116

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0050832 "defense response to fungus" evidence=IEP;IMP

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006569 "tryptophan catabolic process" evidence=RCA

GO:0006857 "oligopeptide transport" evidence=RCA

GO:0006865 "amino acid transport" evidence=RCA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

TAIR|locus:2824870 AT1G51805 [Arabidopsis thaliana (taxid:3702)]

 Score = 171 (65.3 bits), Expect = 4.4e-33, Sum P(5) = 4.4e-33
 Identities = 40/120 (33%), Positives = 57/120 (47%)

Query:     1 MEMFQQFVSLCLCIFHLAALV----YAEHEAG-----SSYTEASTKLKYISDTNYIETGL 51
             ME  + FV+  + I HL        +   + G     S Y    T L Y SD   + +G 
Sbjct:     1 MESHRVFVATFMLILHLVQAQDQPGFINVDCGLLPRDSPYNALGTGLVYTSDVGLVSSGK 60

Query:    52 AKSILLQHRRAKQQQVWSLRSFPDGIRNCYRFNLTRDSKYLIRTTFIHGNYDEQNILPDF 111
                I  +          +LR FPDG RNCY  N++RD+ Y+I+ TF++GNYD     P+F
Sbjct:    61 TGKIAKEFEENNSTPNLTLRYFPDGARNCYNLNVSRDTNYMIKATFVYGNYDGHKDEPNF 120

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2078196 AT3G46350 [Arabidopsis thaliana (taxid:3702)]

 Score = 184 (69.8 bits), Expect = 2.5e-30, Sum P(4) = 2.5e-30
 Identities = 41/85 (48%), Positives = 53/85 (62%)

Query:    29 SSYTEASTKLKYISDTNYIETGLAKSI--LLQHRRAKQQQVWSLRSFPDGIRNCYRFNLT 86
             S YTE  T L+Y SD+N+I++G    I   LQ    KQQ   +LR FPDGIRNCY   + 
Sbjct:    43 SPYTEPVTTLQYSSDSNFIQSGKLGRIDTSLQTFFLKQQT--TLRYFPDGIRNCYNLTVK 100

Query:    87 RDSKYLIRTTFIHGNYDEQNILPDF 111
             + + YLIR  F +GNYD +N+ P F
Sbjct:   101 QGTNYLIRARFTYGNYDGRNMSPTF 125

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2024987 AT1G07550 [Arabidopsis thaliana (taxid:3702)]

 Score = 177 (67.4 bits), Expect = 5.5e-29, Sum P(5) = 5.5e-29
 Identities = 41/87 (47%), Positives = 54/87 (62%)

Query:    29 SSYTEASTKLKYISDTNYIETG----LAKSILLQHRRAKQQQVWSLRSFPDGIRNCYRFN 84
             S Y EA++ L YISD ++I+ G    + K +L++ R  K   V  LR FPDGIRNCY  N
Sbjct:    41 SPYNEANSNLTYISDADFIQGGKTGNVQKDLLMKLR--KPYTV--LRYFPDGIRNCYSLN 96

Query:    85 LTRDSKYLIRTTFIHGNYDEQNILPDF 111
             + +D+ YLIR  F +GNYD  N  P F
Sbjct:    97 VKQDTNYLIRVMFRYGNYDGLNNSPRF 123

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2017572 AT1G51790 [Arabidopsis thaliana (taxid:3702)]

 Score = 240 (89.5 bits), Expect = 9.8e-29, Sum P(2) = 9.8e-29
 Identities = 41/83 (49%), Positives = 61/83 (73%)

Query:    29 SSYTEASTKLKYISDTNYIETGLAKSILLQHRRAKQQQVWSLRSFPDGIRNCYRFNLTRD 88
             SSYTE ST +KY+SD++Y +TG +  +  ++R+  +Q +WS+RSFP+GIRNCY   +   
Sbjct:    41 SSYTETSTDIKYVSDSSYTDTGTSYFVAPENRQNMKQSMWSVRSFPEGIRNCYTIAVNSS 100

Query:    89 SKYLIRTTFIHGNYDEQNILPDF 111
             +KYLIR  F++GNYD +N +P F
Sbjct:   101 TKYLIRADFMYGNYDSRNEIPGF 123

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006857 "oligopeptide transport" evidence=RCA

GO:0006865 "amino acid transport" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

TAIR|locus:2078191 AT3G46420 [Arabidopsis thaliana (taxid:3702)]

 Score = 180 (68.4 bits), Expect = 1.6e-28, Sum P(4) = 1.6e-28
 Identities = 40/85 (47%), Positives = 52/85 (61%)

Query:    29 SSYTEASTKLKYISDTNYIETGLAKSIL--LQHRRAKQQQVWSLRSFPDGIRNCYRFNLT 86
             S Y E  T L++ +D+N+IETG    I   L+ +  K Q   +LR FPDGIRNCY   +T
Sbjct:    42 SPYIEPFTGLQFTTDSNFIETGKLGRIQASLEPKYRKSQT--TLRYFPDGIRNCYNLTVT 99

Query:    87 RDSKYLIRTTFIHGNYDEQNILPDF 111
             + + YLIR   I+GNYD  NI P F
Sbjct:   100 QGTNYLIRARAIYGNYDGLNIYPKF 124

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2195825 AT1G51850 [Arabidopsis thaliana (taxid:3702)]

 Score = 188 (71.2 bits), Expect = 1.6e-28, Sum P(4) = 1.6e-28
 Identities = 35/83 (42%), Positives = 48/83 (57%)

Query:    29 SSYTEASTKLKYISDTNYIETGLAKSILLQHRRAKQQQVWSLRSFPDGIRNCYRFNLTRD 88
             S Y EA T L Y SD   +  G    I  +      +   +LR FP+G+RNCY  N+T D
Sbjct:    38 SPYNEAKTGLTYTSDDGLVNVGKPGRIAKEFEPLADKPTLTLRYFPEGVRNCYNLNVTSD 97

Query:    89 SKYLIRTTFIHGNYDEQNILPDF 111
             + YLI+ TF++GNYD  N+ P+F
Sbjct:    98 TNYLIKATFVYGNYDGLNVGPNF 120

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006857 "oligopeptide transport" evidence=RCA

GO:0006865 "amino acid transport" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	LOW CONFIDENCE prediction!
3rd Layer	2.7.11	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	342
pfam12819	335	pfam12819, Malectin_like, Carbohydrate-binding pro	8e-24
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	2e-04
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	2e-04
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	3e-04
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	4e-04
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	7e-04
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	0.001
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	0.001
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	0.001
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	0.001
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	0.002
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	0.004
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	0.004
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	0.004

>gnl|CDD|221790 pfam12819, Malectin_like, Carbohydrate-binding protein of the ER

 Score = 99.3 bits (248), Expect = 8e-24
 Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 6/95 (6%)

Query: 26  EAGSSYTEASTKLKYISDTNYIETGLAKSILLQHR-RAKQQQVWSLRSFPDGIRNCYRFN 84
            +  SYT+ ST + ++SD  +I+TG + +I  ++      +   +LRSFPDG RNCY   
Sbjct: 6   PSNESYTDPSTGITWVSDAGFIDTGKSGNISKENSSSFLSKPYKTLRSFPDGKRNCYTLP 65

Query: 85  LT--RDSKYLIRTTFIHGNYDEQNILPDFKPVPKF 117
           +T  + +KYLIR TF++GNYD  N        P F
Sbjct: 66  VTPGKGTKYLIRATFLYGNYDGLN---SVSSPPSF 97

Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. Length = 335

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 42.2 bits (100), Expect = 2e-04
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 3/44 (6%)

Query: 203 ECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
           E  +  +     +GLEYLH    + II RD+K+ NILL     +
Sbjct: 97  ESQIAYVCKELLKGLEYLH---SNGIIHRDIKAANILLTSDGEV 137

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 41.7 bits (99), Expect = 2e-04
 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 10/59 (16%)

Query: 215 EGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI-------SPVEGGTHMSTTIAGTAGFL 266
             LEYLH      I+ RD+K  NILL+E   +       +         TT  GT  ++
Sbjct: 108 SALEYLH---SKGIVHRDLKPENILLDEDGHVKLADFGLARQLDPGEKLTTFVGTPEYM 163

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 41.8 bits (99), Expect = 3e-04
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%)

Query: 199 VPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
           V + E  +  +     +GLEYLH      +I RD+KS NILL++   +
Sbjct: 111 VRMNEPQIAYVCREVLQGLEYLHS---QNVIHRDIKSDNILLSKDGSV 155

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 41.1 bits (97), Expect = 4e-04
 Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 11/60 (18%)

Query: 215 EGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI--------SPVEGGTHMSTTIAGTAGFL 266
            GLEYLH    + II RD+K  NILL+E   +          +   +   TT  GT  ++
Sbjct: 109 RGLEYLH---SNGIIHRDLKPENILLDENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYM 165

Length = 260

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 40.3 bits (95), Expect = 7e-04
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 4/55 (7%)

Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHMSTTIAGTAGFLNT 268
           GL+YLH      II RD+K +N+L+N K   +I+       +  T+     F+ T
Sbjct: 111 GLDYLHTKRH--IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGT 163

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 40.0 bits (94), Expect = 0.001
 Identities = 17/31 (54%), Positives = 23/31 (74%), Gaps = 2/31 (6%)

Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
           GL YLH+  KH II RD+K +NIL+N + +I
Sbjct: 112 GLTYLHE--KHKIIHRDVKPSNILVNSRGQI 140

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 39.9 bits (94), Expect = 0.001
 Identities = 16/29 (55%), Positives = 21/29 (72%), Gaps = 3/29 (10%)

Query: 215 EGLEYLHQGLKHPIIQRDMKSTNILLNEK 243
           +GLEYLH    +  I RD+K+ NILLNE+
Sbjct: 110 KGLEYLHS---NKKIHRDIKAGNILLNEE 135

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 39.5 bits (93), Expect = 0.001
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 12/61 (19%)

Query: 215 EGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI---------SPVEGGTHMSTTIAGTAGF 265
           EGLEYLH    + II RD+K  NILL+  +             +     +  TI GT  +
Sbjct: 103 EGLEYLHS---NGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAY 159

Query: 266 L 266
           +
Sbjct: 160 M 160

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 39.5 bits (93), Expect = 0.001
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 3/32 (9%)

Query: 215 EGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
           EGL YLH    + I+ RD+K  NIL++    +
Sbjct: 112 EGLAYLHS---NGIVHRDIKGANILVDSDGVV 140

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 39.5 bits (93), Expect = 0.002
 Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 3/29 (10%)

Query: 215 EGLEYLHQGLKHPIIQRDMKSTNILLNEK 243
           EGL+YLH    + I+ RD+K +NIL+N  
Sbjct: 111 EGLQYLHS---NGILHRDIKGSNILINND 136

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 38.5 bits (89), Expect = 0.004
 Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 10/134 (7%)

Query: 126 FLKRNLGRNKLTGPLPVELIGKQKNNALELSLRVTNNFERV------PYKGGFITVYHGQ 179
           +  R++  N++     +   GKQ N   +  ++     +R+       YKG ++  +   
Sbjct: 42  YFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAW 101

Query: 180 LVKSEVAMKMLSPSSSQGHVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNIL 239
           LV  E  +   S        P+ E  + A+     +GL YLH    H +I RD+K+ NIL
Sbjct: 102 LVM-EYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNIL 157

Query: 240 LNEKSRISPVEGGT 253
           L E  ++   + G+
Sbjct: 158 LTEPGQVKLADFGS 171

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 38.1 bits (89), Expect = 0.004
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 12/59 (20%)

Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKS--RI------SPVEGGTHMSTTIAGTAGFL 266
            LEYLH      II RD+K  NILL+E+    I      + V   T ++T+ +GT G++
Sbjct: 112 ALEYLHS---KGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT-LTTSTSGTPGYM 166

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 37.9 bits (89), Expect = 0.004
 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 3/31 (9%)

Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
            LEYLH      II RD+K  NILL++   I
Sbjct: 114 ALEYLHS---KGIIHRDLKPENILLDKDMHI 141

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	342
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.91
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.87
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.87
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.86
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.86
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.84
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.83
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.83
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.82
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.81
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.79
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.79
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.79
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.78
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.78
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.78
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.78
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.77
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.77
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.77
KOG0198	313	consensus MEKK and related serine/threonine protei	99.77
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.77
PTZ00284	467	protein kinase; Provisional	99.77
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.77
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.76
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.76
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.76
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.76
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.76
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.76
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.76
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.76
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.75
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.75
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.75
PHA02882	294	putative serine/threonine kinase; Provisional	99.75
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.75
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.75
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.75
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.75
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.74
PHA02988	283	hypothetical protein; Provisional	99.74
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.74
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.74
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.74
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.74
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.74
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.74
PTZ00283	496	serine/threonine protein kinase; Provisional	99.74
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.74
KOG3653	534	consensus Transforming growth factor beta/activin	99.74
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.73
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.73
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.73
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.73
PTZ00036	440	glycogen synthase kinase; Provisional	99.73
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.73
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.73
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.73
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.73
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.73
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.73
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.73
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.73
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.73
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.73
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.73
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.73
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.73
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.73
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.73
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.73
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.72
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.72
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.72
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.72
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.72
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.72
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.72
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.72
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.72
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.72
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.72
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.72
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.72
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.72
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.72
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.72
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.72
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.72
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.72
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.72
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.72
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.72
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.71
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.71
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.71
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.71
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.71
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.71
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.71
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.71
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.71
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.71
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.71
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.71
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.71
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.71
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.71
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.71
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.71
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.71
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.71
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.71
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.7
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.7
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.7
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.7
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.7
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.7
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.7
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.7
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.7
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.7
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.7
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.7
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.7
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.7
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.7
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.7
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.7
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.7
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.7
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.69
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.69
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.69
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.69
KOG0578	550	consensus p21-activated serine/threonine protein k	99.69
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.69
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.69
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.69
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.69
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.69
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.69
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.69
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.69
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.69
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.69
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.69
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.69
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.69
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.69
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.69
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.69
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.69
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.69
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.69
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.69
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.69
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.68
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.68
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.68
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.68
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.68
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.68
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.68
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.68
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.68
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.68
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.68
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.68
PHA03209	357	serine/threonine kinase US3; Provisional	99.68
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.68
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.68
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.68
PHA03212	391	serine/threonine kinase US3; Provisional	99.68
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.68
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.68
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.68
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.68
PTZ00267	478	NIMA-related protein kinase; Provisional	99.68
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.68
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.67
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.67
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.67
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.67
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.67
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.67
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.67
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.67
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.67
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.67
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.67
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.67
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.67
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.67
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.67
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.67
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.67
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.67
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.67
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.67
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.66
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.66
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.66
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.66
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.66
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.66
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.66
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.66
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.66
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.66
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.66
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.66
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.66
KOG0605	550	consensus NDR and related serine/threonine kinases	99.66
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.66
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.66
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.65
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.65
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.65
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.65
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.65
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.65
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.65
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.65
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.65
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.65
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.65
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.65
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.65
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.65
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.64
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.64
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.64
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.64
PHA03211	461	serine/threonine kinase US3; Provisional	99.64
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.64
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.64
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.64
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.64
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.64
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.64
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.64
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.64
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.64
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.64
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.63
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.63
PHA03207	392	serine/threonine kinase US3; Provisional	99.63
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.63
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.63
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.63
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.63
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.63
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.63
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.63
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.63
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.63
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.63
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.63
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.63
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.63
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.63
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.63
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.62
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.62
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.62
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.62
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.62
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.62
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.62
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.62
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.62
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.62
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.62
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.62
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.62
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.61
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.61
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.61
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.61
PLN00009	294	cyclin-dependent kinase A; Provisional	99.61
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.61
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.61
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.61
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.61
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.61
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.61
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.6
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.6
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.6
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.6
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.6
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.6
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.6
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.6
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.6
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.6
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.6
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.6
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.6
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.6
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.59
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.59
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.59
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.59
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.59
PF12819	347	Malectin_like: Carbohydrate-binding protein of the	99.59
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.59
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.59
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.59
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.59
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.58
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.58
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.58
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.58
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.58
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.58
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.57
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.57
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.57
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.57
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.57
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.57
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.57
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.57
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.57
KOG0610	459	consensus Putative serine/threonine protein kinase	99.57
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.57
KOG0584	632	consensus Serine/threonine protein kinase [General	99.57
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.57
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.57
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.57
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.57
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.57
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.56
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.56
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.56
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.56
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.56
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.56
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.56
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.55
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.55
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.55
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.55
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.55
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.54
KOG0589	426	consensus Serine/threonine protein kinase [General	99.54
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.54
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.54
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.53
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.53
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.53
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.53
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.53
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.53
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.53
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.52
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.52
PHA03210	501	serine/threonine kinase US3; Provisional	99.52
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.52
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.52
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.51
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.51
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.51
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.51
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.5
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.5
KOG0586	596	consensus Serine/threonine protein kinase [General	99.49
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.49
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.48
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.47
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.47
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.47
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.45
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.45
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.44
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.43
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.43
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.42
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.4
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.4
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.38
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.37
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.36
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.32
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.27
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.26
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.23
PLN03150	623	hypothetical protein; Provisional	99.22
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.22
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.2
PRK09188	365	serine/threonine protein kinase; Provisional	99.2
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.17
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.16
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.13
PLN00181	793	protein SPA1-RELATED; Provisional	99.13
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.13
KOG1152	772	consensus Signal transduction serine/threonine kin	99.11
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.04
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.0
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	98.99
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	98.96
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	98.89
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	98.86
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	98.82
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	98.8
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	98.8
KOG1290	590	consensus Serine/threonine protein kinase [Signal	98.74
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.73
smart00090	237	RIO RIO-like kinase.	98.72
PRK14879	211	serine/threonine protein kinase; Provisional	98.71
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	98.7
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	98.7
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.65
PRK10345	210	hypothetical protein; Provisional	98.62
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	98.61
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.51
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	98.49
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.44
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	98.4
PRK12274	218	serine/threonine protein kinase; Provisional	98.39
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	98.33
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.32
KOG0590	601	consensus Checkpoint kinase and related serine/thr	98.32
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	98.29
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	98.24
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.23
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.02
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	97.99
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	97.79
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	97.78
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	97.65
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	97.55
COG0515	384	SPS1 Serine/threonine protein kinase [General func	96.72
COG0661	517	AarF Predicted unusual protein kinase [General fun	96.57
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	96.47
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	96.32
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	96.21
KOG3087	229	consensus Serine/threonine protein kinase [General	96.15
KOG1266	458	consensus Protein kinase [Signal transduction mech	96.04
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	96.03
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	95.8
COG0478	304	RIO-like serine/threonine protein kinase fused to	95.64
KOG0590	601	consensus Checkpoint kinase and related serine/thr	95.29
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	95.25
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	95.12
PLN03150	623	hypothetical protein; Provisional	94.14
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	94.06
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	93.22
KOG1235	538	consensus Predicted unusual protein kinase [Genera	92.79
PF12799	44	LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_	90.9
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	89.76
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	87.2
KOG2137	700	consensus Protein kinase [Signal transduction mech	85.61
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	84.93
COG4248	637	Uncharacterized protein with protein kinase and he	83.06
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	81.18
PRK09902	216	hypothetical protein; Provisional	80.01

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.3e-33  Score=264.22  Aligned_cols=190  Identities=35%  Similarity=0.496  Sum_probs=153.3

Q ss_pred             cCCCCCHHHHHHHhhccC--cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCCcc------------------EE-Ee
Q 039505          147 KQKNNALELSLRVTNNFE--RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGHVP------------------IV-EC  204 (342)
Q Consensus       147 ~~~~~~~~~l~~at~~f~--~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~~~------------------Lv-~c  204 (342)
                      ..+.|++++|.+||++|+  ++||+|+||.||+|.+.++ .||||+++....+..++                  |+ ||
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC  140 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC  140 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence            345789999999999999  8999999999999999997 99999988766541111                  77 99


Q ss_pred             eCC----cEEE--E----------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--Ccccc
Q 039505          205 HVG----ALIT--I----------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISP  248 (342)
Q Consensus       205 ~~~----~lv~--m----------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~  248 (342)
                      .++    +|||  |                            +|+||+|||+.|+++||||||||+|||||++  +|+.+
T Consensus       141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsD  220 (361)
T KOG1187|consen  141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSD  220 (361)
T ss_pred             ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccC
Confidence            854    8899  5                            8999999999999999999999999999998  78777


Q ss_pred             CCCCCcccc------cc-ccCcceee--------------------------cCCCCcccccccccccccc---------
Q 039505          249 VEGGTHMST------TI-AGTAGFLN--------------------------TKNPVISKSIENGNSHLRD---------  286 (342)
Q Consensus       249 ~~~~~~~~~------~~-~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~---------  286 (342)
                      ++.......      .. .||.||+|                          ||++|.+.........++.         
T Consensus       221 FGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~  300 (361)
T KOG1187|consen  221 FGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEG  300 (361)
T ss_pred             ccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCc
Confidence            654322111      11 89999998                          9999988654211111222         


Q ss_pred             --cccccccCC-CCCCh-HHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccC
Q 039505          287 --KSTVDLSFK-GEFDI-ISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNG  336 (342)
Q Consensus       287 --~~~~d~~l~-~~~~~-~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~  336 (342)
                        .+++||.+. +.++. .++.++..+|++|++.+|++||+|.||+++|+.+..
T Consensus       301 ~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~  354 (361)
T KOG1187|consen  301 KLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS  354 (361)
T ss_pred             chhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence              789999987 55554 689999999999999999999999999999977654

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.91  E-value=1.4e-23  Score=224.15  Aligned_cols=172  Identities=16%  Similarity=0.265  Sum_probs=120.9

Q ss_pred             cccCcCCCeeEEEEEEC-CC-eEEEEEccCCCCCCCcc--------------EE-EeeCC---cEEE--E----------
Q 039505          165 RVPYKGGFITVYHGQLV-KS-EVAMKMLSPSSSQGHVP--------------IV-ECHVG---ALIT--I----------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~-~~-~vAVK~l~~~~~~~~~~--------------Lv-~c~~~---~lv~--m----------  212 (342)
                      ++||+|+||.||+|++. ++ .||||+++........+              ++ +|...   ++|+  |          
T Consensus       696 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~  775 (968)
T PLN00113        696 NVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR  775 (968)
T ss_pred             cEEccCCCeeEEEEEECCCCcEEEEEEccCCccccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh
Confidence            68999999999999985 44 99999987544322221              44 66554   5555  2          


Q ss_pred             -------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCC-CccccccccCcceee---------
Q 039505          213 -------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGG-THMSTTIAGTAGFLN---------  267 (342)
Q Consensus       213 -------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~-~~~~~~~~Gt~~y~a---------  267 (342)
                                   +|+||+|||+.+.++|+||||||+||+++.+  .++...... ........||++|+|         
T Consensus       776 ~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~  855 (968)
T PLN00113        776 NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLRLSLPGLLCTDTKCFISSAYVAPETRETKDI  855 (968)
T ss_pred             cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEEeccccccccCCCccccccccCcccccCCCC
Confidence                         8999999998777999999999999999987  232211111 111223467888888         


Q ss_pred             -----------------cCCCCcccccccccccccc-----------cccccccCCCC--CChHHHHHHHHHHHHccccc
Q 039505          268 -----------------TKNPVISKSIENGNSHLRD-----------KSTVDLSFKGE--FDIISVGKAVEIAMASVSSK  317 (342)
Q Consensus       268 -----------------tG~~P~~~~~~~~~~~l~~-----------~~~~d~~l~~~--~~~~~~~~l~~l~~~Cl~~~  317 (342)
                                       ||+.|++....... .+++           ...+|+.+...  .+.+++.++.+++.+||+.+
T Consensus       856 ~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~  934 (968)
T PLN00113        856 TEKSDIYGFGLILIELLTGKSPADAEFGVHG-SIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATD  934 (968)
T ss_pred             CcccchhhHHHHHHHHHhCCCCCCcccCCCC-cHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCC
Confidence                             99999865432210 1111           23455655432  34566778999999999999


Q ss_pred             CCCCCCHHHHHHHHHhccCC
Q 039505          318 VNRRPLMNQVVMVREQGNGS  337 (342)
Q Consensus       318 P~~RPsm~eV~~~L~~i~~~  337 (342)
                      |++||||.||+++|+++.+.
T Consensus       935 P~~RPt~~evl~~L~~~~~~  954 (968)
T PLN00113        935 PTARPCANDVLKTLESASRS  954 (968)
T ss_pred             chhCcCHHHHHHHHHHhhcc
Confidence            99999999999999988653

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.87  E-value=2.3e-22  Score=190.66  Aligned_cols=166  Identities=24%  Similarity=0.289  Sum_probs=118.2

Q ss_pred             cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCCc--c------------------EE-EeeCC----cEEE--E----
Q 039505          165 RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGHV--P------------------IV-ECHVG----ALIT--I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~~--~------------------Lv-~c~~~----~lv~--m----  212 (342)
                      +.||+|+||+||+|.|++. .||||++.........  .                  ++ .|.+.    .+|.  |    
T Consensus        47 ~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~Gs  126 (362)
T KOG0192|consen   47 EVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGS  126 (362)
T ss_pred             hhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCc
Confidence            5699999999999999998 5999999876433221  1                  44 66553    3444  2    


Q ss_pred             ------------------------ehhhhhhhhccCCCC-eeeCCCCcceEEecCC---CccccCCCCCc------cccc
Q 039505          213 ------------------------PKEGLEYLHQGLKHP-IIQRDMKSTNILLNEK---SRISPVEGGTH------MSTT  258 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~-IiHrDlKp~NILLd~~---a~~~~~~~~~~------~~~~  258 (342)
                                              ||+||.|||+   .+ ||||||||+|||++.+   .|+.+++....      ..+.
T Consensus       127 L~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~---~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~~~  203 (362)
T KOG0192|consen  127 LSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHS---EGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSMTS  203 (362)
T ss_pred             HHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhc---CCCeeecccChhhEEEcCCCCEEEECCCccceeeccccccccC
Confidence                                    9999999999   55 9999999999999998   45555544321      1223


Q ss_pred             cccCcceee----------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHH
Q 039505          259 IAGTAGFLN----------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIA  310 (342)
Q Consensus       259 ~~Gt~~y~a----------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~  310 (342)
                      ..||+.|||                            ||+.||.......   +. ..++....+...+..+...+..++
T Consensus       204 ~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~---~~-~~v~~~~~Rp~~p~~~~~~l~~l~  279 (362)
T KOG0192|consen  204 VAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQ---VA-SAVVVGGLRPPIPKECPPHLSSLM  279 (362)
T ss_pred             CCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHH---HH-HHHHhcCCCCCCCccCCHHHHHHH
Confidence            689999999                            6666665543211   00 122222233333444677789999


Q ss_pred             HHcccccCCCCCCHHHHHHHHHhccCC
Q 039505          311 MASVSSKVNRRPLMNQVVMVREQGNGS  337 (342)
Q Consensus       311 ~~Cl~~~P~~RPsm~eV~~~L~~i~~~  337 (342)
                      .+||+.+|++||++.+++..|+.+...
T Consensus       280 ~~CW~~dp~~RP~f~ei~~~l~~~~~~  306 (362)
T KOG0192|consen  280 ERCWLVDPSRRPSFLEIVSRLESIMSH  306 (362)
T ss_pred             HHhCCCCCCcCCCHHHHHHHHHHHHHh
Confidence            999999999999999999999987553

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.87  E-value=2.4e-22  Score=184.23  Aligned_cols=170  Identities=21%  Similarity=0.192  Sum_probs=116.5

Q ss_pred             CCHHHHHHHhhccCcccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc----------------EE-E----eeCC
Q 039505          151 NALELSLRVTNNFERVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP----------------IV-E----CHVG  207 (342)
Q Consensus       151 ~~~~~l~~at~~f~~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~----------------Lv-~----c~~~  207 (342)
                      .++.+|++.     +.||+|..|+|||+.++.+  .+|+|.+........+.                ++ |    ..++
T Consensus        76 i~~~dle~~-----~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~  150 (364)
T KOG0581|consen   76 ISLSDLERL-----GVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNG  150 (364)
T ss_pred             cCHHHhhhh-----hhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCC
Confidence            445555433     7899999999999999866  89999996554333222                33 1    1111


Q ss_pred             -----cEEEE--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc
Q 039505          208 -----ALITI--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH  254 (342)
Q Consensus       208 -----~lv~m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~  254 (342)
                           ++-||                          |.+||.|||+.  ++||||||||+|||++..  .|+.+++.+..
T Consensus       151 ~~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKicDFGVS~~  228 (364)
T KOG0581|consen  151 EEISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKICDFGVSGI  228 (364)
T ss_pred             ceEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEeccccccHH
Confidence                 11113                          88999999964  899999999999999998  55666554322


Q ss_pred             ----cccccccCcceee--------------------------cCCCCcccccccccccccc--cccccccCCCCCCh-H
Q 039505          255 ----MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRD--KSTVDLSFKGEFDI-I  301 (342)
Q Consensus       255 ----~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~--~~~~d~~l~~~~~~-~  301 (342)
                          ...+.+||..|||                          +|+.|+....+... .+.+  ..+++... +..+. .
T Consensus       229 lvnS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~-~~~~Ll~~Iv~~pp-P~lP~~~  306 (364)
T KOG0581|consen  229 LVNSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYL-DIFELLCAIVDEPP-PRLPEGE  306 (364)
T ss_pred             hhhhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCC-CHHHHHHHHhcCCC-CCCCccc
Confidence                3355889999999                          99999887522110 2222  33343211 11222 3


Q ss_pred             HHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          302 SVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       302 ~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      +..++..++-.|+++||.+||+..|+++
T Consensus       307 fS~ef~~FV~~CL~Kdp~~R~s~~qLl~  334 (364)
T KOG0581|consen  307 FSPEFRSFVSCCLRKDPSERPSAKQLLQ  334 (364)
T ss_pred             CCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            6667899999999999999999999874

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.86  E-value=3.5e-22  Score=192.51  Aligned_cols=166  Identities=23%  Similarity=0.266  Sum_probs=120.3

Q ss_pred             cccCcCCCeeEEEEEECCCeEEEEEccCCCCCCCcc-------------------EE--EeeCC--cEEE----------
Q 039505          165 RVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGHVP-------------------IV--ECHVG--ALIT----------  211 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~~vAVK~l~~~~~~~~~~-------------------Lv--~c~~~--~lv~----------  211 (342)
                      ..||+|+||+||+|.|.+ .||||+++.......+.                   |.  ||...  ++|.          
T Consensus       398 ~rIGsGsFGtV~Rg~whG-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~AIiTqwCeGsSLY~  476 (678)
T KOG0193|consen  398 ERIGSGSFGTVYRGRWHG-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPLAIITQWCEGSSLYT  476 (678)
T ss_pred             ceeccccccceeeccccc-ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCceeeeehhccCchhhh
Confidence            789999999999999976 79999998876543322                   11  44443  2211          


Q ss_pred             ----------E---------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCccccCCCCCccc----------cccccC
Q 039505          212 ----------I---------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTHMS----------TTIAGT  262 (342)
Q Consensus       212 ----------m---------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~~~~~~~~~~~~----------~~~~Gt  262 (342)
                                |         ||+|+.|||.   ++|||||||+.||+|.++.++...+++....          ....|.
T Consensus       477 hlHv~etkfdm~~~idIAqQiaqGM~YLHA---K~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gs  553 (678)
T KOG0193|consen  477 HLHVQETKFDMNTTIDIAQQIAQGMDYLHA---KNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGS  553 (678)
T ss_pred             hccchhhhhhHHHHHHHHHHHHHhhhhhhh---hhhhhhhccccceEEccCCcEEEecccceeeeeeeccccccCCCccc
Confidence                      1         9999999999   9999999999999999985555544442211          224578


Q ss_pred             cceee-----------------------------cCCCCcccccccccccccc--cccccccCCCCCChHHHHHHHHHHH
Q 039505          263 AGFLN-----------------------------TKNPVISKSIENGNSHLRD--KSTVDLSFKGEFDIISVGKAVEIAM  311 (342)
Q Consensus       263 ~~y~a-----------------------------tG~~P~~~~~~~~~~~l~~--~~~~d~~l~~~~~~~~~~~l~~l~~  311 (342)
                      ..|||                             ||..|+.....+.  .++.  ...+-|.+ ......+.+++.+|+.
T Consensus       554 ilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dq--IifmVGrG~l~pd~-s~~~s~~pk~mk~Ll~  630 (678)
T KOG0193|consen  554 LLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQ--IIFMVGRGYLMPDL-SKIRSNCPKAMKRLLS  630 (678)
T ss_pred             hhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhh--eEEEecccccCccc-hhhhccCHHHHHHHHH
Confidence            88998                             8888888443333  2222  33333333 1234567788999999


Q ss_pred             HcccccCCCCCCHHHHHHHHHhccCC
Q 039505          312 ASVSSKVNRRPLMNQVVMVREQGNGS  337 (342)
Q Consensus       312 ~Cl~~~P~~RPsm~eV~~~L~~i~~~  337 (342)
                      .||..++++||.+.+|+..|+.+..+
T Consensus       631 ~C~~~~~~eRP~F~~il~~l~~l~~~  656 (678)
T KOG0193|consen  631 DCWKFDREERPLFPQLLSKLEELLPS  656 (678)
T ss_pred             HHHhcCcccCccHHHHHHHHHHhhhc
Confidence            99999999999999999988887764

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.86  E-value=1.2e-21  Score=181.29  Aligned_cols=159  Identities=21%  Similarity=0.279  Sum_probs=112.1

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-----------c-----------EE----EeeCC---cEEE--
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-----------P-----------IV----ECHVG---ALIT--  211 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-----------~-----------Lv----~c~~~---~lv~--  211 (342)
                      +.||+|+||.|-+|.-+.+  .||||++++.......           |           ++    +....   ++|.  
T Consensus       178 ~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~YmVlE~  257 (475)
T KOG0615|consen  178 KTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSYMVLEY  257 (475)
T ss_pred             eeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceEEEEEE
Confidence            8999999999999988766  9999999876432211           1           22    33332   4444  


Q ss_pred             E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-----CccccCCCC-----Ccc
Q 039505          212 I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-----SRISPVEGG-----THM  255 (342)
Q Consensus       212 m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-----a~~~~~~~~-----~~~  255 (342)
                      |                          ++.|+.|||+   .+|+||||||+||||..+     .|+.+++.+     ...
T Consensus       258 v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~---~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~sf  334 (475)
T KOG0615|consen  258 VEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHS---QGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEGSF  334 (475)
T ss_pred             ecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHH---cCcccccCCcceEEeccCCcceEEEecccchhhcccccee
Confidence            3                          8889999999   999999999999999987     344443322     223


Q ss_pred             ccccccCcceee-----------------------------cCCCCcccccccccccccccccccccCC--CCCChHHHH
Q 039505          256 STTIAGTAGFLN-----------------------------TKNPVISKSIENGNSHLRDKSTVDLSFK--GEFDIISVG  304 (342)
Q Consensus       256 ~~~~~Gt~~y~a-----------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~--~~~~~~~~~  304 (342)
                      ..+.|||+.|+|                             ||.+||.......  .+. .++..-++.  +..+.+..+
T Consensus       335 m~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~--sl~-eQI~~G~y~f~p~~w~~Ise  411 (475)
T KOG0615|consen  335 MKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP--SLK-EQILKGRYAFGPLQWDRISE  411 (475)
T ss_pred             hhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc--cHH-HHHhcCcccccChhhhhhhH
Confidence            355899999999                             8999988765433  111 111111111  123345567


Q ss_pred             HHHHHHHHcccccCCCCCCHHHHHH
Q 039505          305 KAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       305 ~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      +..+++.+++..||++|||+.|+++
T Consensus       412 ea~dlI~~mL~VdP~~R~s~~eaL~  436 (475)
T KOG0615|consen  412 EALDLINWMLVVDPENRPSADEALN  436 (475)
T ss_pred             HHHHHHHHhhEeCcccCcCHHHHhc
Confidence            7899999999999999999999874

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.84  E-value=4.5e-21  Score=185.26  Aligned_cols=156  Identities=24%  Similarity=0.316  Sum_probs=112.3

Q ss_pred             cccCcCCCeeEEEEEE-CCC-eEEEEEccCCCCCCCcc------------------EE----EeeCCcEEE----E----
Q 039505          165 RVPYKGGFITVYHGQL-VKS-EVAMKMLSPSSSQGHVP------------------IV----ECHVGALIT----I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~-~~~-~vAVK~l~~~~~~~~~~------------------Lv----~c~~~~lv~----m----  212 (342)
                      +.||+|||+.||+++. ..+ .||+|++.+........                  +|    |..+.--||    +    
T Consensus        24 ~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLELC~~~  103 (592)
T KOG0575|consen   24 RFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLELCHRG  103 (592)
T ss_pred             eeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEEEecCCc
Confidence            8999999999999998 555 99999998753322211                  33    333333333    2    


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------ccccccc
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIAG  261 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~G  261 (342)
                                             |+.||.|||+   .+|||||||..|++|+++  .|+.+++.++.      ...+.||
T Consensus       104 sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~---~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~TlCG  180 (592)
T KOG0575|consen  104 SLMELLKRRKPLTEPEARYFLRQIVEGLKYLHS---LGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKKTLCG  180 (592)
T ss_pred             cHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHh---cCceecccchhheeecCcCcEEecccceeeeecCcccccceecC
Confidence                                   9999999999   999999999999999999  66666655433      2345899


Q ss_pred             Ccceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHccc
Q 039505          262 TAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVS  315 (342)
Q Consensus       262 t~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~  315 (342)
                      ||.|+|                          +|++||+...-..  .+.....-+-.+    |.....+..+|+...|+
T Consensus       181 TPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vke--ty~~Ik~~~Y~~----P~~ls~~A~dLI~~lL~  254 (592)
T KOG0575|consen  181 TPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKE--TYNKIKLNEYSM----PSHLSAEAKDLIRKLLR  254 (592)
T ss_pred             CCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHH--HHHHHHhcCccc----ccccCHHHHHHHHHHhc
Confidence            999999                          9999998763221  111111222222    22344557888999999


Q ss_pred             ccCCCCCCHHHHHH
Q 039505          316 SKVNRRPLMNQVVM  329 (342)
Q Consensus       316 ~~P~~RPsm~eV~~  329 (342)
                      .+|.+|||+.+|+.
T Consensus       255 ~~P~~Rpsl~~vL~  268 (592)
T KOG0575|consen  255 PNPSERPSLDEVLD  268 (592)
T ss_pred             CCcccCCCHHHHhc
Confidence            99999999999985

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.83  E-value=1.8e-21  Score=174.02  Aligned_cols=162  Identities=14%  Similarity=0.123  Sum_probs=107.3

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC-cc-------------------EE-EeeCC---cEEE-E-----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH-VP-------------------IV-ECHVG---ALIT-I-----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~-~~-------------------Lv-~c~~~---~lv~-m-----  212 (342)
                      .++|+|+||+||||+.+++  .||||++..+..+.. ++                   |+ .|...   .||| +     
T Consensus         8 gkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dhTv   87 (396)
T KOG0593|consen    8 GKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDHTV   87 (396)
T ss_pred             hccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecchHH
Confidence            6789999999999999887  999999977654321 11                   22 22221   3333 1     


Q ss_pred             ----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCccc------cccccC
Q 039505          213 ----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHMS------TTIAGT  262 (342)
Q Consensus       213 ----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~~------~~~~Gt  262 (342)
                                            +++|+.|+|+   +++|||||||+|||++.+  .++++++++...+      +..+.|
T Consensus        88 L~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk---~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDYVAT  164 (396)
T KOG0593|consen   88 LHELERYPNGVPSELVKKYLYQLLKAIHFCHK---NNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDYVAT  164 (396)
T ss_pred             HHHHHhccCCCCHHHHHHHHHHHHHHhhhhhh---cCeecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhhhhh
Confidence                                  8999999999   999999999999999998  6777776654332      335677


Q ss_pred             cceee---------------------------cCCCCcccccccc-cccccc-------------------cccccccCC
Q 039505          263 AGFLN---------------------------TKNPVISKSIENG-NSHLRD-------------------KSTVDLSFK  295 (342)
Q Consensus       263 ~~y~a---------------------------tG~~P~~~~~~~~-~~~l~~-------------------~~~~d~~l~  295 (342)
                      .+|.|                           ||.+-|.+.++-. ...++.                   ..+.-|...
T Consensus       165 RWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~  244 (396)
T KOG0593|consen  165 RWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPE  244 (396)
T ss_pred             hhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCC
Confidence            88887                           6666655544322 001111                   111111111


Q ss_pred             CCCC-----hHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          296 GEFD-----IISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       296 ~~~~-----~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ...+     .....-+++++..|++.||.+|++.+|++.
T Consensus       245 ~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~  283 (396)
T KOG0593|consen  245 HPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH  283 (396)
T ss_pred             CccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence            1111     112335789999999999999999998763

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.83  E-value=2.3e-21  Score=184.81  Aligned_cols=164  Identities=26%  Similarity=0.341  Sum_probs=112.0

Q ss_pred             HHHhhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc-------------------EE--Ee-------
Q 039505          157 LRVTNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP-------------------IV--EC-------  204 (342)
Q Consensus       157 ~~at~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~-------------------Lv--~c-------  204 (342)
                      .+..++|.  +.||+|+|++|++|+...+  .+|||++.+...-..++                   ++  ||       
T Consensus        69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s  148 (604)
T KOG0592|consen   69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES  148 (604)
T ss_pred             cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence            34445666  9999999999999998766  99999997653221111                   22  22       


Q ss_pred             --------eCC-cEEEE-----------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCccccCCCCC-----
Q 039505          205 --------HVG-ALITI-----------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGT-----  253 (342)
Q Consensus       205 --------~~~-~lv~m-----------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~~~~~~~~~-----  253 (342)
                              ..| +|-||                 |..||+|||+   .+||||||||+|||||+|.++...++++     
T Consensus       149 LYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~---~GIIHRDlKPENILLd~dmhikITDFGsAK~l~  225 (604)
T KOG0592|consen  149 LYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHS---NGIIHRDLKPENILLDKDGHIKITDFGSAKILS  225 (604)
T ss_pred             eEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeEcCCCcEEEeeccccccCC
Confidence                    222 11110                 8899999999   9999999999999999994333322221     


Q ss_pred             --------------ccc--cccccCcceee--------------------------cCCCCccccccccccccccccccc
Q 039505          254 --------------HMS--TTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVD  291 (342)
Q Consensus       254 --------------~~~--~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d  291 (342)
                                    ..+  ..++||..|++                          .|++||....+-.  .+-...-+|
T Consensus       226 ~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyl--iFqkI~~l~  303 (604)
T KOG0592|consen  226 PSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYL--IFQKIQALD  303 (604)
T ss_pred             hhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHH--HHHHHHHhc
Confidence                          112  45899999998                          9999998775533  111111223


Q ss_pred             ccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          292 LSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       292 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      -.+....    ...+.+|+.+.+..||.+|+|..||-+
T Consensus       304 y~fp~~f----p~~a~dLv~KLLv~dp~~Rlt~~qIk~  337 (604)
T KOG0592|consen  304 YEFPEGF----PEDARDLIKKLLVRDPSDRLTSQQIKA  337 (604)
T ss_pred             ccCCCCC----CHHHHHHHHHHHccCccccccHHHHhh
Confidence            3333333    355788888999999999999988754

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.82  E-value=4e-21  Score=176.08  Aligned_cols=154  Identities=24%  Similarity=0.270  Sum_probs=105.9

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc------------------EE--Ee-eCC----cEEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP------------------IV--EC-HVG----ALIT  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~------------------Lv--~c-~~~----~lv~  211 (342)
                      ++|.  ++||+|+||+||.++.+++  .+|+|++++...-..++                  |+  +| .+.    ++|.
T Consensus        25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVl  104 (357)
T KOG0598|consen   25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVL  104 (357)
T ss_pred             hheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEE
Confidence            4577  9999999999999998877  99999998875443332                  33  22 121    4443


Q ss_pred             --E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCccccCCCC--------Ccc
Q 039505          212 --I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGG--------THM  255 (342)
Q Consensus       212 --m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~~~~~~~~--------~~~  255 (342)
                        +                          |+.||.|||+   .+||||||||+|||||+++.+...+++        ...
T Consensus       105 d~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~---~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~  181 (357)
T KOG0598|consen  105 DYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHS---KGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDA  181 (357)
T ss_pred             eccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHeeecCCCcEEEeccccchhcccCCCc
Confidence              2                          8899999999   999999999999999999544433332        223


Q ss_pred             ccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHH
Q 039505          256 STTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEI  309 (342)
Q Consensus       256 ~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l  309 (342)
                      +.+++||+.|||                          ||.+||.......   +. ..+....+. ..+.-......++
T Consensus       182 t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~---~~-~~I~~~k~~-~~p~~ls~~ardl  256 (357)
T KOG0598|consen  182 TRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKK---MY-DKILKGKLP-LPPGYLSEEARDL  256 (357)
T ss_pred             cccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHH---HH-HHHhcCcCC-CCCccCCHHHHHH
Confidence            455899999999                          9999998754222   00 111111110 1111123446778


Q ss_pred             HHHcccccCCCCC
Q 039505          310 AMASVSSKVNRRP  322 (342)
Q Consensus       310 ~~~Cl~~~P~~RP  322 (342)
                      +...++.+|++|-
T Consensus       257 l~~LL~rdp~~RL  269 (357)
T KOG0598|consen  257 LKKLLKRDPRQRL  269 (357)
T ss_pred             HHHHhccCHHHhc
Confidence            8889999999995

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.81  E-value=3e-20  Score=173.41  Aligned_cols=157  Identities=24%  Similarity=0.325  Sum_probs=113.5

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc--------------------------------EE-EeeCC--
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP--------------------------------IV-ECHVG--  207 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~--------------------------------Lv-~c~~~--  207 (342)
                      ++||+|+||.||||....+  .||+|++.........+                                ++ ||..+  
T Consensus        19 ~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~gGsv   98 (467)
T KOG0201|consen   19 ELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGGGSV   98 (467)
T ss_pred             hhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcCcch
Confidence            7899999999999998766  89999998876554322                                22 55544  


Q ss_pred             --cEE-----------E-E--ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc------ccccccCc
Q 039505          208 --ALI-----------T-I--PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM------STTIAGTA  263 (342)
Q Consensus       208 --~lv-----------~-m--ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~------~~~~~Gt~  263 (342)
                        .|-           . +  +..||.|||+   .+.+|||||+.|||+..+  +++.+++...+.      ..+++||+
T Consensus        99 ~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~---~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tfvGTP  175 (467)
T KOG0201|consen   99 LDLLKSGNILDEFEIAVILREVLKGLDYLHS---EKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTFVGTP  175 (467)
T ss_pred             hhhhccCCCCccceeeeehHHHHHHhhhhhh---cceecccccccceeEeccCcEEEEecceeeeeechhhccccccccc
Confidence              100           0 0  7889999999   999999999999999988  566665544332      24589999


Q ss_pred             ceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHccccc
Q 039505          264 GFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSK  317 (342)
Q Consensus       264 ~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~  317 (342)
                      .|||                          +|.+|+..........++ .+-..|.+.+    .....+.+++-.|+..+
T Consensus       176 fwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflI-pk~~PP~L~~----~~S~~~kEFV~~CL~k~  250 (467)
T KOG0201|consen  176 FWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLI-PKSAPPRLDG----DFSPPFKEFVEACLDKN  250 (467)
T ss_pred             cccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEec-cCCCCCcccc----ccCHHHHHHHHHHhhcC
Confidence            9999                          999998876543311111 2222333333    44555888888999999


Q ss_pred             CCCCCCHHHHHH
Q 039505          318 VNRRPLMNQVVM  329 (342)
Q Consensus       318 P~~RPsm~eV~~  329 (342)
                      |+.||++.+++.
T Consensus       251 P~~RpsA~~LLK  262 (467)
T KOG0201|consen  251 PEFRPSAKELLK  262 (467)
T ss_pred             cccCcCHHHHhh
Confidence            999999999874

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.79  E-value=1.7e-19  Score=168.85  Aligned_cols=168  Identities=18%  Similarity=0.251  Sum_probs=108.2

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC------eEEEEEccCCCCCCCcc-------------------EE-EeeCC--cEEE
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS------EVAMKMLSPSSSQGHVP-------------------IV-ECHVG--ALIT  211 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~------~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~--~lv~  211 (342)
                      +|+  +.||+|+||.||+|.+...      .||||+++........+                   ++ +|...  .+++
T Consensus         8 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~v~   87 (316)
T cd05108           8 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT   87 (316)
T ss_pred             hceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCCceeee
Confidence            455  8999999999999987432      38999987543221111                   33 55443  3333


Q ss_pred             --E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCccc----
Q 039505          212 --I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHMS----  256 (342)
Q Consensus       212 --m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~~----  256 (342)
                        +                           +++||+|||+   .+|+||||||+|||++++  .++.+++......    
T Consensus        88 e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~  164 (316)
T cd05108          88 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEE---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEK  164 (316)
T ss_pred             ecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEecCCCcEEEccccccccccCCCc
Confidence              1                           8999999999   999999999999999987  4444443322110    


Q ss_pred             ----cccccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHH
Q 039505          257 ----TTIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGK  305 (342)
Q Consensus       257 ----~~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~  305 (342)
                          ....++..|+|                          | |+.|++.........     ++........+..+...
T Consensus       165 ~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~  239 (316)
T cd05108         165 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS-----ILEKGERLPQPPICTID  239 (316)
T ss_pred             ceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHH-----HHhCCCCCCCCCCCCHH
Confidence                11223456776                          4 777776533211001     11111111112233456


Q ss_pred             HHHHHHHcccccCCCCCCHHHHHHHHHhccCC
Q 039505          306 AVEIAMASVSSKVNRRPLMNQVVMVREQGNGS  337 (342)
Q Consensus       306 l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~~  337 (342)
                      +.+++.+||+.+|++||++.+++..|..+...
T Consensus       240 ~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~  271 (316)
T cd05108         240 VYMIMVKCWMIDADSRPKFRELIIEFSKMARD  271 (316)
T ss_pred             HHHHHHHHccCChhhCcCHHHHHHHHHHHHcC
Confidence            88999999999999999999999998877543

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.79  E-value=9.9e-20  Score=168.69  Aligned_cols=110  Identities=31%  Similarity=0.464  Sum_probs=83.2

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCC-CCcc-------------------------------EE--EeeCC-
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQ-GHVP-------------------------------IV--ECHVG-  207 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~-~~~~-------------------------------Lv--~c~~~-  207 (342)
                      +.||+|+||+||+|+++..  .||||.+.+.... ...+                               ||  ||.+| 
T Consensus        16 ~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~gGD   95 (429)
T KOG0595|consen   16 REIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYCNGGD   95 (429)
T ss_pred             hhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeCCCCC
Confidence            6799999999999999866  9999999876421 1111                               22  55544 


Q ss_pred             cEEEE-----------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--------CccccCCCCCccc-----c
Q 039505          208 ALITI-----------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--------SRISPVEGGTHMS-----T  257 (342)
Q Consensus       208 ~lv~m-----------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--------a~~~~~~~~~~~~-----~  257 (342)
                      +-.|+                 +|.||++||+   .+||||||||.||||+..        .|+.++++.....     .
T Consensus        96 Ls~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~---~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a~  172 (429)
T KOG0595|consen   96 LSDYIRRRGRLPEATARHFMQQLASALQFLHE---NNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMAE  172 (429)
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhHHH
Confidence            11111                 9999999999   999999999999999986        3455666654432     4


Q ss_pred             ccccCcceee--------------------------cCCCCccccc
Q 039505          258 TIAGTAGFLN--------------------------TKNPVISKSI  277 (342)
Q Consensus       258 ~~~Gt~~y~a--------------------------tG~~P~~~~~  277 (342)
                      +.+|++.|||                          ||+.||+...
T Consensus       173 tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t  218 (429)
T KOG0595|consen  173 TLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAET  218 (429)
T ss_pred             HhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccC
Confidence            5899999999                          9999999554

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.79  E-value=1.9e-19  Score=171.84  Aligned_cols=168  Identities=18%  Similarity=0.170  Sum_probs=120.3

Q ss_pred             cCcccCcCCCeeEEEEEECCC-eEEEEEccCCCCCC--C-cc--------------EE-EeeCC---cEEE--E------
Q 039505          163 FERVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQG--H-VP--------------IV-ECHVG---ALIT--I------  212 (342)
Q Consensus       163 f~~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~--~-~~--------------Lv-~c~~~---~lv~--m------  212 (342)
                      |.+.||+|.||+|+.|.|... .||+|.++......  . +|              +. .|..+   ++|.  |      
T Consensus       210 l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl  289 (468)
T KOG0197|consen  210 LIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLL  289 (468)
T ss_pred             HHHHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHH
Confidence            338999999999999999988 99999998753221  1 11              44 77764   5555  4      


Q ss_pred             ----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCccc-------ccccc
Q 039505          213 ----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHMS-------TTIAG  261 (342)
Q Consensus       213 ----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~~-------~~~~G  261 (342)
                                            ||+|++||++   +++|||||...|||++++  +|+.+++......       ....-
T Consensus       290 ~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes---~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kf  366 (468)
T KOG0197|consen  290 DYLRTREGGLLNLPQLLDFAAQIAEGMAYLES---KNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKF  366 (468)
T ss_pred             HHhhhcCCCccchHHHHHHHHHHHHHHHHHHh---CCccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCCC
Confidence                                  9999999999   999999999999999999  6666655433110       00001


Q ss_pred             Ccceee---------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcc
Q 039505          262 TAGFLN---------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASV  314 (342)
Q Consensus       262 t~~y~a---------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl  314 (342)
                      .+-|.|                           -|+.|+..+.....     .+.++...+-+.|..|+..+.+|+..||
T Consensus       367 PIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev-----~~~le~GyRlp~P~~CP~~vY~lM~~CW  441 (468)
T KOG0197|consen  367 PIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEV-----LELLERGYRLPRPEGCPDEVYELMKSCW  441 (468)
T ss_pred             CceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHH-----HHHHhccCcCCCCCCCCHHHHHHHHHHh
Confidence            112222                           56666665432210     2334444445567778899999999999


Q ss_pred             cccCCCCCCHHHHHHHHHhccCCC
Q 039505          315 SSKVNRRPLMNQVVMVREQGNGSR  338 (342)
Q Consensus       315 ~~~P~~RPsm~eV~~~L~~i~~~~  338 (342)
                      ..+|++|||+..+...|+.+....
T Consensus       442 ~~~P~~RPtF~~L~~~l~~~~~~~  465 (468)
T KOG0197|consen  442 HEDPEDRPTFETLREVLEDFFTST  465 (468)
T ss_pred             hCCcccCCCHHHHHHHHHHhhhcc
Confidence            999999999999999999887654

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.78  E-value=7.2e-19  Score=160.38  Aligned_cols=162  Identities=14%  Similarity=0.177  Sum_probs=104.3

Q ss_pred             cccCcCCCeeEEEEEEC----CC-eEEEEEccCCCCCCCcc-------------------EE-EeeCC---cEEE--E--
Q 039505          165 RVPYKGGFITVYHGQLV----KS-EVAMKMLSPSSSQGHVP-------------------IV-ECHVG---ALIT--I--  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~----~~-~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~---~lv~--m--  212 (342)
                      +.||+|+||.||+|++.    .. .||+|.++.........                   +. ++..+   ++|+  +  
T Consensus        11 ~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   90 (266)
T cd05064          11 RILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMSN   90 (266)
T ss_pred             eeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEEEeCCC
Confidence            89999999999999874    22 89999987653222111                   23 33332   3333  1  


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc-------ccc
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM-------STT  258 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~-------~~~  258 (342)
                                               ++.||+|||+   .+++||||||+|||++.+  .++.+++.....       ...
T Consensus        91 ~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~---~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~  167 (266)
T cd05064          91 GALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSE---MGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMS  167 (266)
T ss_pred             CcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeeccccHhhEEEcCCCcEEECCCcccccccccchhcccC
Confidence                                     8899999999   999999999999999988  333333211110       011


Q ss_pred             cccCcceee---------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHH
Q 039505          259 IAGTAGFLN---------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAM  311 (342)
Q Consensus       259 ~~Gt~~y~a---------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~  311 (342)
                      ..++..|+|                           +|+.|+.......   +.. .+.+ ......+..++..+.+++.
T Consensus       168 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~---~~~-~~~~-~~~~~~~~~~~~~~~~li~  242 (266)
T cd05064         168 GKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD---VIK-AVED-GFRLPAPRNCPNLLHQLML  242 (266)
T ss_pred             CCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH---HHH-HHHC-CCCCCCCCCCCHHHHHHHH
Confidence            223456666                           4888876543221   000 0001 0111123344566889999


Q ss_pred             HcccccCCCCCCHHHHHHHHHhc
Q 039505          312 ASVSSKVNRRPLMNQVVMVREQG  334 (342)
Q Consensus       312 ~Cl~~~P~~RPsm~eV~~~L~~i  334 (342)
                      .||+.+|++||++.++.+.|+.+
T Consensus       243 ~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         243 DCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             HHcCCCchhCCCHHHHHHHHHhh
Confidence            99999999999999999998764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.78  E-value=4.5e-19  Score=166.92  Aligned_cols=165  Identities=20%  Similarity=0.222  Sum_probs=110.0

Q ss_pred             HhhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc----------------------------------
Q 039505          159 VTNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP----------------------------------  200 (342)
Q Consensus       159 at~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~----------------------------------  200 (342)
                      ..|.|.  ..||+|.||.|-+|+....  .||||++.+........                                  
T Consensus        95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li  174 (576)
T KOG0585|consen   95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI  174 (576)
T ss_pred             ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence            345565  8899999999999998654  99999997653211100                                  


Q ss_pred             ------------EE--EeeCCc----------EEE------E--ehhhhhhhhccCCCCeeeCCCCcceEEecCC--Ccc
Q 039505          201 ------------IV--ECHVGA----------LIT------I--PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRI  246 (342)
Q Consensus       201 ------------Lv--~c~~~~----------lv~------m--ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~  246 (342)
                                  |+  ||..+-          |..      +  +..||+|||.   ++||||||||+|+||+++  .|+
T Consensus       175 EvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~---QgiiHRDIKPsNLLl~~~g~VKI  251 (576)
T KOG0585|consen  175 EVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHY---QGIIHRDIKPSNLLLSSDGTVKI  251 (576)
T ss_pred             EeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEEcCCCcEEe
Confidence                        22  444331          111      0  8899999999   999999999999999999  444


Q ss_pred             ccCCCCCcc-----------ccccccCcceee------------------------------cCCCCccccccccccccc
Q 039505          247 SPVEGGTHM-----------STTIAGTAGFLN------------------------------TKNPVISKSIENGNSHLR  285 (342)
Q Consensus       247 ~~~~~~~~~-----------~~~~~Gt~~y~a------------------------------tG~~P~~~~~~~~~~~l~  285 (342)
                      .+++.....           -...+|||.|+|                              .|+.||.....-..   .
T Consensus       252 sDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l---~  328 (576)
T KOG0585|consen  252 SDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELEL---F  328 (576)
T ss_pred             eccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHH---H
Confidence            443322111           123689999999                              45555544322110   0


Q ss_pred             ccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHH
Q 039505          286 DKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMV  330 (342)
Q Consensus       286 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~  330 (342)
                       .+++...+.-+...+..+.+.+|++++|++||++|.+..+|...
T Consensus       329 -~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~H  372 (576)
T KOG0585|consen  329 -DKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLH  372 (576)
T ss_pred             -HHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheec
Confidence             34444444333334456678899999999999999999988644

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.78  E-value=1e-19  Score=174.25  Aligned_cols=165  Identities=22%  Similarity=0.253  Sum_probs=121.0

Q ss_pred             cccCcCCCeeEEEEEECCCeEEEEEccCCCCCCCcc-----------------------EE--EeeCC--cEEE-----E
Q 039505          165 RVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGHVP-----------------------IV--ECHVG--ALIT-----I  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~~vAVK~l~~~~~~~~~~-----------------------Lv--~c~~~--~lv~-----m  212 (342)
                      +.||+|+.|.||.|++.+..||||+++.-...+.+.                       ++  ||..+  +-|.     |
T Consensus       130 eWlGSGaQGAVF~Grl~netVAVKKV~elkETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~~~i  209 (904)
T KOG4721|consen  130 EWLGSGAQGAVFLGRLHNETVAVKKVRELKETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAGRPI  209 (904)
T ss_pred             hhhccCcccceeeeeccCceehhHHHhhhhhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHHHHhccCcc
Confidence            789999999999999998899999987544322221                       22  55444  1111     1


Q ss_pred             -----------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-----cccccccCcceee-------
Q 039505          213 -----------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-----MSTTIAGTAGFLN-------  267 (342)
Q Consensus       213 -----------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-----~~~~~~Gt~~y~a-------  267 (342)
                                 ||.|+.|||.   +.|||||||+-||||+.+  .|+.+++....     +...++||..|||       
T Consensus       210 tp~llv~Wsk~IA~GM~YLH~---hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvIrne  286 (904)
T KOG4721|consen  210 TPSLLVDWSKGIAGGMNYLHL---HKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNE  286 (904)
T ss_pred             CHHHHHHHHHHhhhhhHHHHH---hhHhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhhhHhhhCHHHhhcC
Confidence                       9999999999   999999999999999987  56665543321     2234899999999       


Q ss_pred             -------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHH
Q 039505          268 -------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVV  328 (342)
Q Consensus       268 -------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~  328 (342)
                                         ||..|+.......  .+|  .+-...+.-..+..|++-+.-|+..||+..|..||++++++
T Consensus       287 PcsEKVDIwSfGVVLWEmLT~EiPYkdVdssA--IIw--GVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil  362 (904)
T KOG4721|consen  287 PCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSA--IIW--GVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQIL  362 (904)
T ss_pred             CcccccceehhHHHHHHHHhcCCCccccchhe--eEE--eccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHH
Confidence                               8888887654433  222  22333444445667777789999999999999999999999


Q ss_pred             HHHHhccC
Q 039505          329 MVREQGNG  336 (342)
Q Consensus       329 ~~L~~i~~  336 (342)
                      ..|+-...
T Consensus       363 ~HldIa~p  370 (904)
T KOG4721|consen  363 LHLDIASP  370 (904)
T ss_pred             HHHhhcCH
Confidence            98875543

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.78  E-value=8e-19  Score=165.70  Aligned_cols=117  Identities=16%  Similarity=0.155  Sum_probs=77.2

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc--------ccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM--------STTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~--------~~~~~Gt~~y~a---------------  267 (342)
                      +++||+|||+   .+|+||||||+|||++++  .++.+++.....        .....++..|+|               
T Consensus       183 i~~aL~~LH~---~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi  259 (338)
T cd05102         183 VARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDV  259 (338)
T ss_pred             HHHHHHHHHH---CCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCCcccCH
Confidence            6789999999   999999999999999987  445444432211        112345567877               


Q ss_pred             -----------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhcc
Q 039505          268 -----------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       268 -----------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                                 | |+.|+.......  .+.. .+.+... ...+......+.+++.+||+.+|++|||+.|+++.|+.+.
T Consensus       260 wslG~il~el~~~g~~pf~~~~~~~--~~~~-~~~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~  335 (338)
T cd05102         260 WSFGVLLWEIFSLGASPYPGVQINE--EFCQ-RLKDGTR-MRAPENATPEIYRIMLACWQGDPKERPTFSALVEILGDLL  335 (338)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCCccH--HHHH-HHhcCCC-CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence                       3 778876532211  1111 0111100 1112233456889999999999999999999999999875


Q ss_pred             C
Q 039505          336 G  336 (342)
Q Consensus       336 ~  336 (342)
                      .
T Consensus       336 ~  336 (338)
T cd05102         336 Q  336 (338)
T ss_pred             h
Confidence            4

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.77  E-value=4.3e-19  Score=165.99  Aligned_cols=160  Identities=21%  Similarity=0.272  Sum_probs=109.5

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc----------------EE--EeeC---C--cEEE--E-----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP----------------IV--ECHV---G--ALIT--I-----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~----------------Lv--~c~~---~--~lv~--m-----  212 (342)
                      ++||.|.-++||+|+..-.  .||||+++....+..-.                ++  +|.-   .  .+|.  |     
T Consensus        32 e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~  111 (516)
T KOG0582|consen   32 EVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMAGGSL  111 (516)
T ss_pred             EEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehhhcCCcH
Confidence            8999999999999987544  99999998876554421                55  3321   1  3333  3     


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCccccCCCCC-----------ccc-c
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGT-----------HMS-T  257 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~~~~~~~~~-----------~~~-~  257 (342)
                                             +++||.|||.   .+-||||||+.||||++++.+...+++.           ... .
T Consensus       112 ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~---~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~  188 (516)
T KOG0582|consen  112 LDIIKTYYPDGLEEASIATILREVLKALDYLHQ---NGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFN  188 (516)
T ss_pred             HHHHHHHccccccHHHHHHHHHHHHHHHHHHHh---cCceecccccccEEEcCCCcEEEcCceeeeeecccCceeeEeec
Confidence                                   7899999999   9999999999999999994443333211           111 4


Q ss_pred             ccccCcceee----------------------------cCCCCcccccccccccccc-cccccc-----cCCCCCChHHH
Q 039505          258 TIAGTAGFLN----------------------------TKNPVISKSIENGNSHLRD-KSTVDL-----SFKGEFDIISV  303 (342)
Q Consensus       258 ~~~Gt~~y~a----------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~-----~l~~~~~~~~~  303 (342)
                      ..+||+.|||                            +|..||.......  -+.. .+--.|     .+..+......
T Consensus       189 tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmk--vLl~tLqn~pp~~~t~~~~~d~~k~~~  266 (516)
T KOG0582|consen  189 TFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMK--VLLLTLQNDPPTLLTSGLDKDEDKKFS  266 (516)
T ss_pred             cccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHH--HHHHHhcCCCCCcccccCChHHhhhhc
Confidence            5789999998                            8999998765432  1111 000011     11111122234


Q ss_pred             HHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          304 GKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       304 ~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ..+.+++-.|++.||++|||+.+++.
T Consensus       267 ksf~e~i~~CL~kDP~kRptAskLlk  292 (516)
T KOG0582|consen  267 KSFREMIALCLVKDPSKRPTASKLLK  292 (516)
T ss_pred             HHHHHHHHHHhhcCcccCCCHHHHhc
Confidence            46888999999999999999999874

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.77  E-value=6.2e-19  Score=172.48  Aligned_cols=153  Identities=22%  Similarity=0.308  Sum_probs=112.9

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc-------------------EE---EeeCC----cEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP-------------------IV---ECHVG----ALI  210 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~-------------------Lv---~c~~~----~lv  210 (342)
                      ++|.  .+||+|+||+|+.+.++.+  .+|||++++...-...+                   |+   .|...    +.|
T Consensus       368 ~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fv  447 (694)
T KOG0694|consen  368 DDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFV  447 (694)
T ss_pred             cceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEE
Confidence            4566  9999999999999999877  99999999886443333                   33   22222    111


Q ss_pred             E-------E--------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCC------CCcc
Q 039505          211 T-------I--------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEG------GTHM  255 (342)
Q Consensus       211 ~-------m--------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~------~~~~  255 (342)
                      +       |                    |+.||.|||+   ++||+||||.+|||||.+  .|+.+++.      ....
T Consensus       448 mey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~---~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~~  524 (694)
T KOG0694|consen  448 MEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHE---NGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGDR  524 (694)
T ss_pred             EEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHh---cCceeeecchhheEEcccCcEEecccccccccCCCCCc
Confidence            1       1                    8889999999   999999999999999998  44444432      1234


Q ss_pred             ccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCC--CCChHHHHHHH
Q 039505          256 STTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKG--EFDIISVGKAV  307 (342)
Q Consensus       256 ~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~--~~~~~~~~~l~  307 (342)
                      +.+++||+.|||                          +|..||.+..++.        +.|..+..  .++.....+.+
T Consensus       525 TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee--------~FdsI~~d~~~yP~~ls~ea~  596 (694)
T KOG0694|consen  525 TSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEE--------VFDSIVNDEVRYPRFLSKEAI  596 (694)
T ss_pred             cccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHH--------HHHHHhcCCCCCCCcccHHHH
Confidence            567999999999                          9999999776554        33333322  23455566788


Q ss_pred             HHHHHcccccCCCCCCH
Q 039505          308 EIAMASVSSKVNRRPLM  324 (342)
Q Consensus       308 ~l~~~Cl~~~P~~RPsm  324 (342)
                      .|+.+.+..+|++|-.+
T Consensus       597 ~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  597 AIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             HHHHHHhccCcccccCC
Confidence            89999999999999866

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.77  E-value=5.3e-19  Score=163.04  Aligned_cols=160  Identities=24%  Similarity=0.244  Sum_probs=102.8

Q ss_pred             cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCCC-------cc-----------E---E-EeeCC---cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQGH-------VP-----------I---V-ECHVG---ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~~-------~~-----------L---v-~c~~~---~lv~--m---  212 (342)
                      +.||+|+||+||+|.... + .||||.+........       .+           +   . .+..+   ++++  +   
T Consensus         6 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~g   85 (285)
T cd05631           6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMNGG   85 (285)
T ss_pred             EEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecCCC
Confidence            789999999999999864 4 999999865421111       01           1   1 22222   2222  1   


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-----cccccc
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-----MSTTIA  260 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-----~~~~~~  260 (342)
                                               ++.||+|||+   .+|+||||||+|||++++  .++.+++....     ......
T Consensus        86 ~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~  162 (285)
T cd05631          86 DLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQR---ERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRGRV  162 (285)
T ss_pred             cHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecCCC
Confidence                                     8899999999   999999999999999987  44444433221     112356


Q ss_pred             cCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcc
Q 039505          261 GTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASV  314 (342)
Q Consensus       261 Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl  314 (342)
                      ||..|+|                          ||+.||...........+...+...  ....+......+.+++.+||
T Consensus       163 g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~~~li~~~l  240 (285)
T cd05631         163 GTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKED--QEEYSEKFSEDAKSICRMLL  240 (285)
T ss_pred             CCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcc--cccCCccCCHHHHHHHHHHh
Confidence            8899988                          8888887543221000000111111  11122233456888999999


Q ss_pred             cccCCCCCC-----HHHHHH
Q 039505          315 SSKVNRRPL-----MNQVVM  329 (342)
Q Consensus       315 ~~~P~~RPs-----m~eV~~  329 (342)
                      +.+|++||+     +.++++
T Consensus       241 ~~~P~~R~~~~~~~~~~~~~  260 (285)
T cd05631         241 TKNPKERLGCRGNGAAGVKQ  260 (285)
T ss_pred             hcCHHHhcCCCCCCHHHHhc
Confidence            999999997     788875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.77  E-value=1.1e-18  Score=161.45  Aligned_cols=161  Identities=22%  Similarity=0.252  Sum_probs=107.9

Q ss_pred             cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCC----Ccc-----------EE-EeeC-C---cEEE---E-------
Q 039505          165 RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQG----HVP-----------IV-ECHV-G---ALIT---I-------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~----~~~-----------Lv-~c~~-~---~lv~---m-------  212 (342)
                      +.||+|+||+||++...+ + ..|||.........    .++           +| |.-. .   ...|   |       
T Consensus        23 ~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~Gs  102 (313)
T KOG0198|consen   23 KLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGGS  102 (313)
T ss_pred             ccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCCCc
Confidence            899999999999999876 4 99999987763222    111           44 3322 1   1011   2       


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecC-C--CccccCCCCCc---------ccc
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNE-K--SRISPVEGGTH---------MST  257 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~-~--a~~~~~~~~~~---------~~~  257 (342)
                                             |++||+|||+   ++||||||||+|||++. +  .++.+++....         ...
T Consensus       103 L~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs---~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~  179 (313)
T KOG0198|consen  103 LSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHS---KGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSEL  179 (313)
T ss_pred             HHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCcccceEEEeCCCCeEEeccCccccccccccccccccc
Confidence                                   9999999999   99999999999999998 4  56666553221         122


Q ss_pred             ccccCcceee---------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHH
Q 039505          258 TIAGTAGFLN---------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIA  310 (342)
Q Consensus       258 ~~~Gt~~y~a---------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~  310 (342)
                      ...||+.|||                           ||++|+....+.. ..+.. ....... +..+........+++
T Consensus       180 ~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~-~~~~~-ig~~~~~-P~ip~~ls~~a~~Fl  256 (313)
T KOG0198|consen  180 SVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEA-EALLL-IGREDSL-PEIPDSLSDEAKDFL  256 (313)
T ss_pred             cccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchH-HHHHH-HhccCCC-CCCCcccCHHHHHHH
Confidence            3789999999                           7777777531110 00010 0111111 133444555678888


Q ss_pred             HHcccccCCCCCCHHHHHHHH
Q 039505          311 MASVSSKVNRRPLMNQVVMVR  331 (342)
Q Consensus       311 ~~Cl~~~P~~RPsm~eV~~~L  331 (342)
                      ..|++.+|++|||+.+++..-
T Consensus       257 ~~C~~~~p~~Rpta~eLL~hp  277 (313)
T KOG0198|consen  257 RKCFKRDPEKRPTAEELLEHP  277 (313)
T ss_pred             HHHhhcCcccCcCHHHHhhCh
Confidence            999999999999999998653

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.77  E-value=2.4e-18  Score=156.37  Aligned_cols=169  Identities=15%  Similarity=0.209  Sum_probs=106.5

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-------c--------------EE-EeeC-C--cEEE-
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-------P--------------IV-ECHV-G--ALIT-  211 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-------~--------------Lv-~c~~-~--~lv~-  211 (342)
                      +|.  +.||+|+||.||+|+...+  .||||.++.......+       +              ++ ++.. +  .+++ 
T Consensus         3 ~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   82 (267)
T cd08228           3 NFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLE   82 (267)
T ss_pred             ceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEE
Confidence            454  8899999999999998644  9999987643211111       1              22 2211 1  2222 


Q ss_pred             E-------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc----
Q 039505          212 I-------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH----  254 (342)
Q Consensus       212 m-------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~----  254 (342)
                      +                               +++||+|||+   .+++||||||+||+++.+.  ++.+++....    
T Consensus        83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~  159 (267)
T cd08228          83 LADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK  159 (267)
T ss_pred             ecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCCHHHEEEcCCCCEEECccccceeccch
Confidence            1                               8889999999   9999999999999999873  3333332211    


Q ss_pred             --cccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHH
Q 039505          255 --MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKA  306 (342)
Q Consensus       255 --~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l  306 (342)
                        ......|++.|+|                          ||+.|+........ .+.. .+................+
T Consensus       160 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~  237 (267)
T cd08228         160 TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLF-SLCQ-KIEQCDYPPLPTEHYSEKL  237 (267)
T ss_pred             hHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHH-HHHH-HHhcCCCCCCChhhcCHHH
Confidence              1112457777777                          78888754321110 1111 0000011111122344568


Q ss_pred             HHHHHHcccccCCCCCCHHHHHHHHHhcc
Q 039505          307 VEIAMASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       307 ~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                      .+++.+||+.+|++||++.+|++.|++++
T Consensus       238 ~~li~~cl~~~p~~Rp~~~~vl~~~~~~~  266 (267)
T cd08228         238 RELVSMCIYPDPDQRPDIGYVHQIAKQMH  266 (267)
T ss_pred             HHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence            89999999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>PTZ00284 protein kinase; Provisional

Probab=99.77  E-value=3.8e-19  Score=175.65  Aligned_cols=172  Identities=17%  Similarity=0.190  Sum_probs=107.4

Q ss_pred             HHHHhhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC---cc--------------------EE-EeeCC
Q 039505          156 SLRVTNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH---VP--------------------IV-ECHVG  207 (342)
Q Consensus       156 l~~at~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~---~~--------------------Lv-~c~~~  207 (342)
                      +...+++|.  ++||+|+||+||+|.....  .||||+++.......   .+                    ++ ++...
T Consensus       124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~  203 (467)
T PTZ00284        124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNE  203 (467)
T ss_pred             cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcC
Confidence            334566777  8999999999999998654  899999864321100   00                    23 44332


Q ss_pred             ----cEEE--E-------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-------------
Q 039505          208 ----ALIT--I-------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-------------  243 (342)
Q Consensus       208 ----~lv~--m-------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-------------  243 (342)
                          ++|+  +                         ++.||+|||+.  .+||||||||+|||++.+             
T Consensus       204 ~~~~~iv~~~~g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~--~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~  281 (467)
T PTZ00284        204 TGHMCIVMPKYGPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTE--LHLMHTDLKPENILMETSDTVVDPVTNRALP  281 (467)
T ss_pred             CceEEEEEeccCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhc--CCeecCCCCHHHEEEecCCcccccccccccC
Confidence                3333  1                         88999999972  489999999999999865             


Q ss_pred             -----CccccCCCCC---ccccccccCcceee--------------------------cCCCCcccccccccccccc---
Q 039505          244 -----SRISPVEGGT---HMSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRD---  286 (342)
Q Consensus       244 -----a~~~~~~~~~---~~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~---  286 (342)
                           .++.+++...   ......+||+.|+|                          ||+.||+..........+.   
T Consensus       282 ~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~  361 (467)
T PTZ00284        282 PDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTL  361 (467)
T ss_pred             CCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHc
Confidence                 2344443221   12234689999998                          9999997543211000000   


Q ss_pred             ----------------cccc------cccCCC--------CC---ChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          287 ----------------KSTV------DLSFKG--------EF---DIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       287 ----------------~~~~------d~~l~~--------~~---~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                                      .++.      .+....        ..   .......+.+++..||+.||++|||+.|+++
T Consensus       362 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~  437 (467)
T PTZ00284        362 GRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTT  437 (467)
T ss_pred             CCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence                            0000      000000        00   0001234679999999999999999999986

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.77  E-value=1.5e-18  Score=157.18  Aligned_cols=160  Identities=18%  Similarity=0.220  Sum_probs=103.8

Q ss_pred             ccCcCCCeeEEEEEEC---CC-eEEEEEccCCCCCCCc--c------------------EE-EeeCC--cEEE--E----
Q 039505          166 VPYKGGFITVYHGQLV---KS-EVAMKMLSPSSSQGHV--P------------------IV-ECHVG--ALIT--I----  212 (342)
Q Consensus       166 ~lG~G~fG~Vykg~~~---~~-~vAVK~l~~~~~~~~~--~------------------Lv-~c~~~--~lv~--m----  212 (342)
                      .||+|+||.||+|.++   ++ .+|+|+++........  +                  ++ +|...  .+++  +    
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~   81 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAESWMLVMELAELGP   81 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCcEEEEecCCCCc
Confidence            6899999999999764   23 8999998754322110  0                  33 44333  3444  1    


Q ss_pred             ----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc---------cccc
Q 039505          213 ----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM---------STTI  259 (342)
Q Consensus       213 ----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~---------~~~~  259 (342)
                                            ++.||+|||+   .+|+||||||+||+++++  .++.+++.....         ....
T Consensus        82 L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~  158 (257)
T cd05116          82 LNKFLQKNKHVTEKNITELVHQVSMGMKYLEE---TNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHG  158 (257)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCC
Confidence                                  8899999999   999999999999999988  344443322110         0111


Q ss_pred             ccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHH
Q 039505          260 AGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMA  312 (342)
Q Consensus       260 ~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~  312 (342)
                      .++..|+|                          | |+.|+.......   +.  +.+......+.+......+.+++.+
T Consensus       159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~--~~i~~~~~~~~~~~~~~~l~~li~~  233 (257)
T cd05116         159 KWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNE---VT--QMIESGERMECPQRCPPEMYDLMKL  233 (257)
T ss_pred             CCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH---HH--HHHHCCCCCCCCCCCCHHHHHHHHH
Confidence            23455665                          5 888887543221   11  1111111112233345568899999


Q ss_pred             cccccCCCCCCHHHHHHHHHh
Q 039505          313 SVSSKVNRRPLMNQVVMVREQ  333 (342)
Q Consensus       313 Cl~~~P~~RPsm~eV~~~L~~  333 (342)
                      ||+.+|++||++.+|++.|+.
T Consensus       234 ~~~~~p~~Rp~~~~i~~~l~~  254 (257)
T cd05116         234 CWTYGVDERPGFAVVELRLRN  254 (257)
T ss_pred             HhccCchhCcCHHHHHHHHhc
Confidence            999999999999999999986

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.76  E-value=1.1e-18  Score=170.52  Aligned_cols=158  Identities=23%  Similarity=0.301  Sum_probs=115.9

Q ss_pred             ccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc---------------EE----EeeCC--cEEEE----------
Q 039505          166 VPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP---------------IV----ECHVG--ALITI----------  212 (342)
Q Consensus       166 ~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~---------------Lv----~c~~~--~lv~m----------  212 (342)
                      +||+|.||+||-|+..++  .+|||.+.....+..+.               ++    .|.++  +.+||          
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs  661 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS  661 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence            899999999999999887  89999998765544333               33    45544  55665          


Q ss_pred             ----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC---CccccCCCCC------cccccccc
Q 039505          213 ----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK---SRISPVEGGT------HMSTTIAG  261 (342)
Q Consensus       213 ----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~---a~~~~~~~~~------~~~~~~~G  261 (342)
                                            |.+||.|||+   ..|||||||..|||++.-   .|+.+++...      ..+.++.|
T Consensus       662 LLrskWGPlKDNEstm~fYtkQILeGLkYLHe---n~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTG  738 (1226)
T KOG4279|consen  662 LLRSKWGPLKDNESTMNFYTKQILEGLKYLHE---NKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTG  738 (1226)
T ss_pred             HHHhccCCCccchhHHHHHHHHHHHHhhhhhh---cceeeccccCCcEEEeeccceEEecccccchhhccCCcccccccc
Confidence                                  9999999999   999999999999999977   3444433221      12345789


Q ss_pred             Ccceee----------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHc
Q 039505          262 TAGFLN----------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMAS  313 (342)
Q Consensus       262 t~~y~a----------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~C  313 (342)
                      |..|||                            ||++||........ .+.+..+.  ...++.+.+...+....+++|
T Consensus       739 TLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA-AMFkVGmy--KvHP~iPeelsaeak~Filrc  815 (1226)
T KOG4279|consen  739 TLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA-AMFKVGMY--KVHPPIPEELSAEAKNFILRC  815 (1226)
T ss_pred             chhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH-hhhhhcce--ecCCCCcHHHHHHHHHHHHHH
Confidence            999999                            99999987643320 11111111  122344667778899999999


Q ss_pred             ccccCCCCCCHHHHHH
Q 039505          314 VSSKVNRRPLMNQVVM  329 (342)
Q Consensus       314 l~~~P~~RPsm~eV~~  329 (342)
                      ..++|.+||++.++++
T Consensus       816 Fepd~~~R~sA~~LL~  831 (1226)
T KOG4279|consen  816 FEPDPCDRPSAKDLLQ  831 (1226)
T ss_pred             cCCCcccCccHHHhcc
Confidence            9999999999999875

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.76  E-value=2e-18  Score=157.15  Aligned_cols=166  Identities=18%  Similarity=0.226  Sum_probs=104.4

Q ss_pred             hccC--cccCcCCCeeEEEEEECC----C-eEEEEEccCCCCCCCc-----c--------------EE-EeeCC---cEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVK----S-EVAMKMLSPSSSQGHV-----P--------------IV-ECHVG---ALI  210 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~----~-~vAVK~l~~~~~~~~~-----~--------------Lv-~c~~~---~lv  210 (342)
                      ++|.  +.||+|+||+||+|.+..    . .||||.++........     +              +. ++..+   +++
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv   83 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII   83 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence            3455  899999999999999852    2 8999998755322211     1              22 22222   233


Q ss_pred             E--E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc----
Q 039505          211 T--I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM----  255 (342)
Q Consensus       211 ~--m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~----  255 (342)
                      +  +                           ++.||+|||+   .+|+||||||+|||++++  .++.+++.....    
T Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~  160 (266)
T cd05033          84 TEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSE  160 (266)
T ss_pred             EEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCCEEECccchhhcccccc
Confidence            3  1                           8899999999   999999999999999988  344433221111    


Q ss_pred             ----ccccccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHH
Q 039505          256 ----STTIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVG  304 (342)
Q Consensus       256 ----~~~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~  304 (342)
                          .....++..|+|                          | |..|+.......   +.. .+.+. ...+.+.....
T Consensus       161 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~---~~~-~~~~~-~~~~~~~~~~~  235 (266)
T cd05033         161 ATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQD---VIK-AVEDG-YRLPPPMDCPS  235 (266)
T ss_pred             cceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHH---HHH-HHHcC-CCCCCCCCCCH
Confidence                111223445665                          3 666665432211   000 01010 01112233456


Q ss_pred             HHHHHHHHcccccCCCCCCHHHHHHHHHhc
Q 039505          305 KAVEIAMASVSSKVNRRPLMNQVVMVREQG  334 (342)
Q Consensus       305 ~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i  334 (342)
                      .+.+++.+||+.+|++||++.||++.|+++
T Consensus       236 ~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         236 ALYQLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             HHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            688999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.76  E-value=1.1e-18  Score=158.04  Aligned_cols=167  Identities=19%  Similarity=0.268  Sum_probs=108.3

Q ss_pred             hhccC--cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCCcc------------------EE-EeeCC---cEEE--E
Q 039505          160 TNNFE--RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGHVP------------------IV-ECHVG---ALIT--I  212 (342)
Q Consensus       160 t~~f~--~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~~~------------------Lv-~c~~~---~lv~--m  212 (342)
                      .++|.  +.||+|+||.||+|.+.++ .+|+|.+..........                  ++ ++..+   ++++  +
T Consensus         5 ~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   84 (261)
T cd05148           5 REEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELM   84 (261)
T ss_pred             HHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeec
Confidence            34455  8999999999999999878 99999987654321111                  22 33332   2222  1


Q ss_pred             ----------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc------c
Q 039505          213 ----------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM------S  256 (342)
Q Consensus       213 ----------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~------~  256 (342)
                                                  ++.||+|||+   .+|+||||||+||+++++  .++.+++.....      .
T Consensus        85 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~  161 (261)
T cd05148          85 EKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEE---QNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLS  161 (261)
T ss_pred             ccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccCcceEEEcCCceEEEccccchhhcCCccccc
Confidence                                        8899999999   899999999999999988  344333222110      1


Q ss_pred             cccccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHH
Q 039505          257 TTIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEI  309 (342)
Q Consensus       257 ~~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l  309 (342)
                      ....++..|++                          + |+.|+.......   ...  .+........+..+...+.++
T Consensus       162 ~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~  236 (261)
T cd05148         162 SDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHE---VYD--QITAGYRMPCPAKCPQEIYKI  236 (261)
T ss_pred             cCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHH---HHH--HHHhCCcCCCCCCCCHHHHHH
Confidence            11223445655                          4 677776543221   000  011111112233445668899


Q ss_pred             HHHcccccCCCCCCHHHHHHHHHhc
Q 039505          310 AMASVSSKVNRRPLMNQVVMVREQG  334 (342)
Q Consensus       310 ~~~Cl~~~P~~RPsm~eV~~~L~~i  334 (342)
                      +.+||+.+|++|||+.++++.|+.+
T Consensus       237 i~~~l~~~p~~Rpt~~~l~~~L~~~  261 (261)
T cd05148         237 MLECWAAEPEDRPSFKALREELDNI  261 (261)
T ss_pred             HHHHcCCCchhCcCHHHHHHHHhcC
Confidence            9999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.76  E-value=1.7e-18  Score=158.76  Aligned_cols=166  Identities=18%  Similarity=0.209  Sum_probs=105.7

Q ss_pred             cccCcCCCeeEEEEEECC-C-----eEEEEEccCCCCCCCcc-------------------EE-EeeCC--cEEE--E--
Q 039505          165 RVPYKGGFITVYHGQLVK-S-----EVAMKMLSPSSSQGHVP-------------------IV-ECHVG--ALIT--I--  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~-~-----~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~--~lv~--m--  212 (342)
                      +.||+|+||+||+|.+.. +     .||+|+++........+                   ++ +|...  .+++  +  
T Consensus        13 ~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~l~~~~~~~   92 (279)
T cd05109          13 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTSTVQLVTQLMPY   92 (279)
T ss_pred             eecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCCcEEEEEcCCC
Confidence            899999999999998643 2     38999987543221111                   33 44333  2222  1  


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc--------cc
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM--------ST  257 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~--------~~  257 (342)
                                               +++||+|||+   .+|+||||||+|||++++  .++.+++.....        ..
T Consensus        93 g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~~  169 (279)
T cd05109          93 GCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEE---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHAD  169 (279)
T ss_pred             CCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEEcCCCcEEECCCCceeecccccceeecC
Confidence                                     8999999999   999999999999999887  444444322111        01


Q ss_pred             ccccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHH
Q 039505          258 TIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIA  310 (342)
Q Consensus       258 ~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~  310 (342)
                      ...++..|++                          | |..|+..........++     ........+......+.+++
T Consensus       170 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~li  244 (279)
T cd05109         170 GGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLL-----EKGERLPQPPICTIDVYMIM  244 (279)
T ss_pred             CCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH-----HCCCcCCCCccCCHHHHHHH
Confidence            1223455666                          4 77776543221100111     11011111223445688999


Q ss_pred             HHcccccCCCCCCHHHHHHHHHhccCCC
Q 039505          311 MASVSSKVNRRPLMNQVVMVREQGNGSR  338 (342)
Q Consensus       311 ~~Cl~~~P~~RPsm~eV~~~L~~i~~~~  338 (342)
                      .+||+.+|++||++.++++.|+.+....
T Consensus       245 ~~~l~~dp~~Rp~~~~l~~~l~~~~~~~  272 (279)
T cd05109         245 VKCWMIDSECRPRFRELVDEFSRMARDP  272 (279)
T ss_pred             HHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence            9999999999999999999998876543

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.76  E-value=7.7e-19  Score=176.11  Aligned_cols=171  Identities=21%  Similarity=0.231  Sum_probs=118.9

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc----------------EE------------------------
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP----------------IV------------------------  202 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~----------------Lv------------------------  202 (342)
                      ++|.+|||+.||.++...+  .+|+|++-.....+.+.                +|                        
T Consensus        43 ~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmE  122 (738)
T KOG1989|consen   43 KVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLME  122 (738)
T ss_pred             EEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehh
Confidence            8999999999999998765  99999986553332221                33                        


Q ss_pred             EeeCC-cEEEE-------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCccccc--
Q 039505          203 ECHVG-ALITI-------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHMSTT--  258 (342)
Q Consensus       203 ~c~~~-~lv~m-------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~~~~--  258 (342)
                      ||..+ ++.||                   +++|+++||. +.++|||||||-+||||+.+  .|+++++..+.....  
T Consensus       123 yC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~-~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~  201 (738)
T KOG1989|consen  123 YCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHY-LKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPT  201 (738)
T ss_pred             hccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc-CCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCc
Confidence            55543 22221                   9999999998 67899999999999999998  566666554332111  


Q ss_pred             -------------cccCcceee------cCCCCcccccccccccccc--------------------cccccccCCCCCC
Q 039505          259 -------------IAGTAGFLN------TKNPVISKSIENGNSHLRD--------------------KSTVDLSFKGEFD  299 (342)
Q Consensus       259 -------------~~Gt~~y~a------tG~~P~~~~~~~~~~~l~~--------------------~~~~d~~l~~~~~  299 (342)
                                   ..-|+-|.+      .+..|++...     ++|.                    ..+++-...-+..
T Consensus       202 ~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKs-----DIWALGclLYkLCy~t~PFe~sg~laIlng~Y~~P~~  276 (738)
T KOG1989|consen  202 SAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKS-----DIWALGCLLYKLCYFTTPFEESGKLAILNGNYSFPPF  276 (738)
T ss_pred             cHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchh-----HHHHHHHHHHHHHHhCCCcCcCcceeEEeccccCCCC
Confidence                         235677777      3334443322     2222                    2344444433333


Q ss_pred             hHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccCCCCCC
Q 039505          300 IISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNGSRITI  341 (342)
Q Consensus       300 ~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~~~~~~  341 (342)
                      ......+.+|+..||+.+|++||++-||+..+.++.....++
T Consensus       277 p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~~~  318 (738)
T KOG1989|consen  277 PNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPCPI  318 (738)
T ss_pred             ccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCCCc
Confidence            567888999999999999999999999999999888765543

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.76  E-value=1.3e-18  Score=165.47  Aligned_cols=161  Identities=16%  Similarity=0.141  Sum_probs=100.8

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-----c-----------E---E-EeeCC---cEEE--E-----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-----P-----------I---V-ECHVG---ALIT--I-----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-----~-----------L---v-~c~~~---~lv~--m-----  212 (342)
                      +.||+|+||+||+|++...  .||||++.........     +           +   + ++..+   ++++  +     
T Consensus        80 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L  159 (353)
T PLN00034         80 NRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSL  159 (353)
T ss_pred             hhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCCCcc
Confidence            7899999999999998744  9999998654322111     1           2   2 22222   2232  1     


Q ss_pred             -----------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------cccccccCcceee
Q 039505          213 -----------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIAGTAGFLN  267 (342)
Q Consensus       213 -----------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~Gt~~y~a  267 (342)
                                       +++||+|||+   .+|+||||||+|||++++  .++.+++....      ......||..|+|
T Consensus       160 ~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~a  236 (353)
T PLN00034        160 EGTHIADEQFLADVARQILSGIAYLHR---RHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVGTIAYMS  236 (353)
T ss_pred             cccccCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEcccccceecccccccccccccCccccC
Confidence                             8999999999   999999999999999988  44444433211      1123468888877


Q ss_pred             -------------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccc
Q 039505          268 -------------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSS  316 (342)
Q Consensus       268 -------------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~  316 (342)
                                                     +|+.||..........+.. .+. .......+.....++.+++.+||+.
T Consensus       237 PE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~l~~li~~~l~~  314 (353)
T PLN00034        237 PERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMC-AIC-MSQPPEAPATASREFRHFISCCLQR  314 (353)
T ss_pred             ccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHH-HHh-ccCCCCCCCccCHHHHHHHHHHccC
Confidence                                           5555554221111000000 000 0001111223345688999999999


Q ss_pred             cCCCCCCHHHHHHH
Q 039505          317 KVNRRPLMNQVVMV  330 (342)
Q Consensus       317 ~P~~RPsm~eV~~~  330 (342)
                      +|++||++.|+++.
T Consensus       315 ~P~~Rpt~~ell~h  328 (353)
T PLN00034        315 EPAKRWSAMQLLQH  328 (353)
T ss_pred             ChhhCcCHHHHhcC
Confidence            99999999999864

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.76  E-value=7.4e-19  Score=152.70  Aligned_cols=159  Identities=25%  Similarity=0.276  Sum_probs=111.1

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCC-------CCcc--------------EE-EeeCC---cEEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQ-------GHVP--------------IV-ECHVG---ALIT  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~-------~~~~--------------Lv-~c~~~---~lv~  211 (342)
                      ++|.  +.||+|.||.||.|+.+.+  .||+|++.++...       -.++              +. |..+.   +|+.
T Consensus        22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLil  101 (281)
T KOG0580|consen   22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLIL  101 (281)
T ss_pred             hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEE
Confidence            4566  9999999999999998876  9999998655311       1111              22 33333   2222


Q ss_pred             -E-----------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc----c
Q 039505          212 -I-----------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH----M  255 (342)
Q Consensus       212 -m-----------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~----~  255 (342)
                       .                             +|.||.|+|.   ++||||||||+|+|++.+.  ++.+++-+.+    .
T Consensus       102 Eya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~---k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~k  178 (281)
T KOG0580|consen  102 EYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHL---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSNK  178 (281)
T ss_pred             EecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhcc---CCcccCCCCHHHhccCCCCCeeccCCCceeecCCCC
Confidence             1                             9999999999   9999999999999999883  4444332222    2


Q ss_pred             ccccccCcceee--------------------------cCCCCcccccccc-cccccccccccccCCCCCChHHHHHHHH
Q 039505          256 STTIAGTAGFLN--------------------------TKNPVISKSIENG-NSHLRDKSTVDLSFKGEFDIISVGKAVE  308 (342)
Q Consensus       256 ~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~-~~~l~~~~~~d~~l~~~~~~~~~~~l~~  308 (342)
                      ..+.+||.-|.+                          .|.+||.....+. ...+...++.+|       ......+.+
T Consensus       179 R~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p-------~~is~~a~d  251 (281)
T KOG0580|consen  179 RKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFP-------STISGGAAD  251 (281)
T ss_pred             ceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCC-------cccChhHHH
Confidence            345899999998                          8999998765332 111111333333       223344789


Q ss_pred             HHHHcccccCCCCCCHHHHHH
Q 039505          309 IAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       309 l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ++..|+..+|.+|.+..||++
T Consensus       252 lI~~ll~~~p~~r~~l~~v~~  272 (281)
T KOG0580|consen  252 LISRLLVKNPIERLALTEVMD  272 (281)
T ss_pred             HHHHHhccCccccccHHHHhh
Confidence            999999999999999999875

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.76  E-value=3.3e-18  Score=157.16  Aligned_cols=166  Identities=16%  Similarity=0.183  Sum_probs=105.3

Q ss_pred             cccCcCCCeeEEEEEECCC------eEEEEEccCCCCCCC-cc------------------EE-EeeCC--cEEE--E--
Q 039505          165 RVPYKGGFITVYHGQLVKS------EVAMKMLSPSSSQGH-VP------------------IV-ECHVG--ALIT--I--  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~------~vAVK~l~~~~~~~~-~~------------------Lv-~c~~~--~lv~--m--  212 (342)
                      +.||+|+||+||+|.+...      .+++|.+........ .+                  ++ +|...  .+++  +  
T Consensus        13 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~~~~~i~e~~~~   92 (279)
T cd05111          13 KLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGASLQLVTQLSPL   92 (279)
T ss_pred             cccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCCccEEEEEeCCC
Confidence            8899999999999998432      488888754322111 10                  33 44333  2222  1  


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc--------ccc
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH--------MST  257 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~--------~~~  257 (342)
                                               ++.||+|||+   .+++||||||+|||++++  .++.+++....        ...
T Consensus        93 gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~  169 (279)
T cd05111          93 GSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEE---HRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYS  169 (279)
T ss_pred             CcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEEcCCccceeccCCCcccccC
Confidence                                     8899999999   899999999999999988  34444332211        112


Q ss_pred             ccccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHH
Q 039505          258 TIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIA  310 (342)
Q Consensus       258 ~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~  310 (342)
                      ...++..|++                          | |+.|+..........++.     .......+..+...+.+++
T Consensus       170 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~li  244 (279)
T cd05111         170 EHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLE-----KGERLAQPQICTIDVYMVM  244 (279)
T ss_pred             CCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-----CCCcCCCCCCCCHHHHHHH
Confidence            2345666766                          5 777776543221111111     1000111122334578889


Q ss_pred             HHcccccCCCCCCHHHHHHHHHhccCCC
Q 039505          311 MASVSSKVNRRPLMNQVVMVREQGNGSR  338 (342)
Q Consensus       311 ~~Cl~~~P~~RPsm~eV~~~L~~i~~~~  338 (342)
                      .+||+.+|++|||+.|+++.|+.+.+..
T Consensus       245 ~~c~~~~p~~Rps~~el~~~l~~~~~~~  272 (279)
T cd05111         245 VKCWMIDENVRPTFKELANEFTRMARDP  272 (279)
T ss_pred             HHHcCCCcccCcCHHHHHHHHHHHHhCC
Confidence            9999999999999999999998876543

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.75  E-value=2.4e-18  Score=156.00  Aligned_cols=165  Identities=18%  Similarity=0.217  Sum_probs=105.1

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCCc---c-----------EE----EeeCC---cEEE--E---
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGHV---P-----------IV----ECHVG---ALIT--I---  212 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~~---~-----------Lv----~c~~~---~lv~--m---  212 (342)
                      +|.  +.||+|+||.||+|...++ .||+|.+.........   +           ++    .+..+   ++++  +   
T Consensus         7 ~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   86 (261)
T cd05072           7 SIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKG   86 (261)
T ss_pred             HeEEeeecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCCC
Confidence            455  8999999999999998777 9999998754321100   1           22    22222   3333  1   


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCcc-------ccc
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHM-------STT  258 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~~-------~~~  258 (342)
                                               +++||+|||+   .+++||||||+||+++++.  ++.+++.....       ...
T Consensus        87 ~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~  163 (261)
T cd05072          87 SLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREG  163 (261)
T ss_pred             cHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEecCCCcEEECCCccceecCCCceeccCC
Confidence                                     8899999999   9999999999999999883  33333222111       111


Q ss_pred             cccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHH
Q 039505          259 IAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAM  311 (342)
Q Consensus       259 ~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~  311 (342)
                      ..++..|+|                          | |+.|+.......   +.. .+ ......+........+.+++.
T Consensus       164 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~---~~~-~~-~~~~~~~~~~~~~~~~~~li~  238 (261)
T cd05072         164 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD---VMS-AL-QRGYRMPRMENCPDELYDIMK  238 (261)
T ss_pred             CccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH---HHH-HH-HcCCCCCCCCCCCHHHHHHHH
Confidence            234456666                          6 777775432211   000 00 000111111223456889999


Q ss_pred             HcccccCCCCCCHHHHHHHHHhc
Q 039505          312 ASVSSKVNRRPLMNQVVMVREQG  334 (342)
Q Consensus       312 ~Cl~~~P~~RPsm~eV~~~L~~i  334 (342)
                      +|+..+|++||++.++.+.|+.+
T Consensus       239 ~~l~~~p~~Rp~~~~i~~~l~~~  261 (261)
T cd05072         239 TCWKEKAEERPTFDYLQSVLDDF  261 (261)
T ss_pred             HHccCCcccCcCHHHHHHHHhcC
Confidence            99999999999999999999863

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.75  E-value=2.5e-19  Score=172.24  Aligned_cols=157  Identities=24%  Similarity=0.317  Sum_probs=105.3

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc---------------------------------EE--EeeCC
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP---------------------------------IV--ECHVG  207 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~---------------------------------Lv--~c~~~  207 (342)
                      +.||.|+||.||-++...+  .||||+++-+..+....                                 ||  ||.+.
T Consensus        32 rEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYClGS  111 (948)
T KOG0577|consen   32 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCLGS  111 (948)
T ss_pred             HHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHhcc
Confidence            8899999999999998655  99999998776665444                                 33  55544


Q ss_pred             ---cE-EE---E-----------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCccccCCCCCc----cccccccCcce
Q 039505          208 ---AL-IT---I-----------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH----MSTTIAGTAGF  265 (342)
Q Consensus       208 ---~l-v~---m-----------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~~~~~~~~~~----~~~~~~Gt~~y  265 (342)
                         ++ |.   |           ++.||+|||+   ++.||||||..||||++.+-+...++++.    ...+++|||.|
T Consensus       112 AsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS---~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsFvGTPyw  188 (948)
T KOG0577|consen  112 ASDLLEVHKKPLQEVEIAAITHGALQGLAYLHS---HNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSFVGTPYW  188 (948)
T ss_pred             HHHHHHHHhccchHHHHHHHHHHHHHHHHHHHH---hhHHhhhccccceEecCCCeeeeccccchhhcCchhcccCCccc
Confidence               11 11   1           7789999999   99999999999999999954444444433    23458999999


Q ss_pred             ee------------cC-----------------CCCcccccccc-cccccccccccccCCCCCChHHHHHHHHHHHHccc
Q 039505          266 LN------------TK-----------------NPVISKSIENG-NSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVS  315 (342)
Q Consensus       266 ~a------------tG-----------------~~P~~~~~~~~-~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~  315 (342)
                      ||            +|                 ++|...+.... ..++  ..--.|.+..   .+....+..++-.|++
T Consensus       189 MAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHI--AQNesPtLqs---~eWS~~F~~Fvd~CLq  263 (948)
T KOG0577|consen  189 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI--AQNESPTLQS---NEWSDYFRNFVDSCLQ  263 (948)
T ss_pred             cchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHH--HhcCCCCCCC---chhHHHHHHHHHHHHh
Confidence            99            22                 23322221110 0000  1111233332   2344557777779999


Q ss_pred             ccCCCCCCHHHHHH
Q 039505          316 SKVNRRPLMNQVVM  329 (342)
Q Consensus       316 ~~P~~RPsm~eV~~  329 (342)
                      +-|.+|||..+++.
T Consensus       264 KipqeRptse~ll~  277 (948)
T KOG0577|consen  264 KIPQERPTSEELLK  277 (948)
T ss_pred             hCcccCCcHHHHhh
Confidence            99999999998764

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.75  E-value=2.2e-18  Score=160.25  Aligned_cols=117  Identities=12%  Similarity=0.113  Sum_probs=72.2

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc--------ccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM--------STTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~--------~~~~~Gt~~y~a---------------  267 (342)
                      ++.||.|||+   .+|+||||||+|||++++  .++.+++.....        .....++..|+|               
T Consensus       147 i~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv  223 (304)
T cd05096         147 IASGMKYLSS---LNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDV  223 (304)
T ss_pred             HHHHHHHHHH---CCccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhh
Confidence            7889999999   899999999999999988  444444332211        112344667877               


Q ss_pred             -------------cCCCCccccccccccccccccccc---ccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHH
Q 039505          268 -------------TKNPVISKSIENGNSHLRDKSTVD---LSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVR  331 (342)
Q Consensus       268 -------------tG~~P~~~~~~~~~~~l~~~~~~d---~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L  331 (342)
                                   ++..|+...........+ .+...   .......+..++..+.+++.+||+.+|++||||.+|.+.|
T Consensus       224 ~slG~~l~el~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l  302 (304)
T cd05096         224 WAFGVTLWEILMLCKEQPYGELTDEQVIENA-GEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFL  302 (304)
T ss_pred             HHHHHHHHHHHHccCCCCCCcCCHHHHHHHH-HHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHH
Confidence                         244444432211100000 00000   0000111223456689999999999999999999999988


Q ss_pred             Hh
Q 039505          332 EQ  333 (342)
Q Consensus       332 ~~  333 (342)
                      ++
T Consensus       303 ~~  304 (304)
T cd05096         303 TE  304 (304)
T ss_pred             hC
Confidence            64

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.75  E-value=2.6e-18  Score=159.28  Aligned_cols=114  Identities=17%  Similarity=0.146  Sum_probs=77.0

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-------------cccccccCcceee----------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-------------MSTTIAGTAGFLN----------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-------------~~~~~~Gt~~y~a----------  267 (342)
                      +++||+|||+   .+|+||||||+|||++.+  .++.+++....             ......||+.|+|          
T Consensus       135 i~~~l~~lH~---~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~  211 (294)
T PHA02882        135 MLTTLEYIHE---HGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVT  211 (294)
T ss_pred             HHHHHHHHHh---CCeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCC
Confidence            8899999999   899999999999999977  44444443211             1122469999988          


Q ss_pred             ----------------cCCCCcccccccccccccc---cccccccCCCC-CChHHHHHHHHHHHHcccccCCCCCCHHHH
Q 039505          268 ----------------TKNPVISKSIENGNSHLRD---KSTVDLSFKGE-FDIISVGKAVEIAMASVSSKVNRRPLMNQV  327 (342)
Q Consensus       268 ----------------tG~~P~~~~~~~~~~~l~~---~~~~d~~l~~~-~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV  327 (342)
                                      ||+.||.......  .++.   .+.......+. ....+...+.+++..|++.+|++||++.++
T Consensus       212 ~~~DiwSlG~~l~el~~g~~P~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l  289 (294)
T PHA02882        212 RRGDLESLGYCMLKWAGIKLPWKGFGHNG--NLIHAAKCDFIKRLHEGKIKIKNANKFIYDFIECVTKLSYEEKPDYDAL  289 (294)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCccccch--HHHHHhHHHHHHHhhhhhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHH
Confidence                            8999997653222  1111   11111111010 112234668899999999999999999999


Q ss_pred             HHHH
Q 039505          328 VMVR  331 (342)
Q Consensus       328 ~~~L  331 (342)
                      .+.|
T Consensus       290 ~~~~  293 (294)
T PHA02882        290 IKIF  293 (294)
T ss_pred             HHhh
Confidence            9876

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.75  E-value=1.9e-18  Score=161.52  Aligned_cols=173  Identities=17%  Similarity=0.177  Sum_probs=119.2

Q ss_pred             cccCcCCCeeEEEEEECCCeEEEEEccCCCCCCCcc---------------------------------EE--EeeCC-c
Q 039505          165 RVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGHVP---------------------------------IV--ECHVG-A  208 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~~vAVK~l~~~~~~~~~~---------------------------------Lv--~c~~~-~  208 (342)
                      +.||+|.||.|++|.|++..||||++......+...                                 |+  |...| +
T Consensus       217 e~IGkGRyGEVwrG~wrGe~VAVKiF~srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL  296 (513)
T KOG2052|consen  217 EIIGKGRFGEVWRGRWRGEDVAVKIFSSRDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSL  296 (513)
T ss_pred             EEecCccccceeeccccCCceEEEEecccchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccCCcH
Confidence            789999999999999998899999998765444322                                 44  55444 2


Q ss_pred             EEE----------E------ehhhhhhhhcc-----CCCCeeeCCCCcceEEecCCCccccCCCC--------C----cc
Q 039505          209 LIT----------I------PKEGLEYLHQG-----LKHPIIQRDMKSTNILLNEKSRISPVEGG--------T----HM  255 (342)
Q Consensus       209 lv~----------m------ia~gL~yLH~~-----~~~~IiHrDlKp~NILLd~~a~~~~~~~~--------~----~~  255 (342)
                      ..|          |      +|.||++||.+     ..+.|.|||||+.|||+..+......+.+        +    ..
T Consensus       297 ~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~  376 (513)
T KOG2052|consen  297 YDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIP  376 (513)
T ss_pred             HHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCCcccCC
Confidence            222          1      89999999963     35789999999999999999221111111        0    01


Q ss_pred             ccccccCcceee------------------------------------cC------CCCccccccc-----ccccccccc
Q 039505          256 STTIAGTAGFLN------------------------------------TK------NPVISKSIEN-----GNSHLRDKS  288 (342)
Q Consensus       256 ~~~~~Gt~~y~a------------------------------------tG------~~P~~~~~~~-----~~~~l~~~~  288 (342)
                      ...-+||..|||                                    +|      +.||.+.-+.     .+..++..+
T Consensus       377 ~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~  456 (513)
T KOG2052|consen  377 PNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQ  456 (513)
T ss_pred             CCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeec
Confidence            233589999999                                    11      3455432211     112333344


Q ss_pred             cccccCCCCC-ChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccCC
Q 039505          289 TVDLSFKGEF-DIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNGS  337 (342)
Q Consensus       289 ~~d~~l~~~~-~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~~  337 (342)
                      -+.|.++..+ ..+++..+.+++..||..+|..|-|+-.|-+.|.++.++
T Consensus       457 ~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~~  506 (513)
T KOG2052|consen  457 KLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSNS  506 (513)
T ss_pred             ccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhcC
Confidence            4555554443 446788899999999999999999999998888887643

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.75  E-value=4e-18  Score=154.98  Aligned_cols=162  Identities=19%  Similarity=0.184  Sum_probs=104.3

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC---cc--------------EE-EeeCC---cEEE--E-------
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH---VP--------------IV-ECHVG---ALIT--I-------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~---~~--------------Lv-~c~~~---~lv~--m-------  212 (342)
                      +.||+|+||.||+|.+.+.  .||+|.+........   .+              ++ +|...   .+++  +       
T Consensus        12 ~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   91 (263)
T cd05052          12 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD   91 (263)
T ss_pred             eecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCCCcHHH
Confidence            8899999999999998754  899999875432100   01              33 33332   2333  1       


Q ss_pred             ---------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCccc-------cccccC
Q 039505          213 ---------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHMS-------TTIAGT  262 (342)
Q Consensus       213 ---------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~~-------~~~~Gt  262 (342)
                                           +++||+|||+   .+++||||||+||+++++  .++.+++......       ....++
T Consensus        92 ~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~  168 (263)
T cd05052          92 YLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP  168 (263)
T ss_pred             HHHhCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCcEEeCCCccccccccceeeccCCCCCc
Confidence                                 8899999999   899999999999999988  3344333221110       011234


Q ss_pred             cceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHccc
Q 039505          263 AGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVS  315 (342)
Q Consensus       263 ~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~  315 (342)
                      ..|+|                          | |..|+.......   +.  ..+......+.+......+.+++.+||+
T Consensus       169 ~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~li~~cl~  243 (263)
T cd05052         169 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VY--ELLEKGYRMERPEGCPPKVYELMRACWQ  243 (263)
T ss_pred             cccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---HH--HHHHCCCCCCCCCCCCHHHHHHHHHHcc
Confidence            45666                          5 777775432111   11  1111111122233345668899999999


Q ss_pred             ccCCCCCCHHHHHHHHHhc
Q 039505          316 SKVNRRPLMNQVVMVREQG  334 (342)
Q Consensus       316 ~~P~~RPsm~eV~~~L~~i  334 (342)
                      .+|++||++.+++++|+.+
T Consensus       244 ~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         244 WNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             CCcccCCCHHHHHHHHHhh
Confidence            9999999999999999875

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.75  E-value=3.1e-18  Score=161.01  Aligned_cols=156  Identities=17%  Similarity=0.169  Sum_probs=101.4

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-------c--------------EE-EeeCC---cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-------P--------------IV-ECHVG---ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-------~--------------Lv-~c~~~---~lv~--m---  212 (342)
                      ++||+|+||.||+++...+  .||||+++........       +              +. ++..+   ++|+  +   
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            4799999999999998654  9999998753211110       0              22 23222   3333  1   


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------ccccccc
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIAG  261 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~G  261 (342)
                                             ++.||+|||+   .+|+||||||+|||++.+  .++.+++....      ......|
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~g  157 (323)
T cd05571          81 ELFFHLSRERVFSEDRARFYGAEIVSALGYLHS---CDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG  157 (323)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceec
Confidence                                   8899999999   999999999999999988  44444443211      1223578


Q ss_pred             Ccceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHccc
Q 039505          262 TAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVS  315 (342)
Q Consensus       262 t~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~  315 (342)
                      |+.|+|                          ||+.||...........+  ..-+..+    +......+.+++.+||+
T Consensus       158 t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~--~~~~~~~----p~~~~~~~~~li~~~L~  231 (323)
T cd05571         158 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI--LMEEIRF----PRTLSPEAKSLLAGLLK  231 (323)
T ss_pred             CccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHH--HcCCCCC----CCCCCHHHHHHHHHHcc
Confidence            999998                          777777543221100000  0001111    22234457889999999


Q ss_pred             ccCCCCC-----CHHHHHH
Q 039505          316 SKVNRRP-----LMNQVVM  329 (342)
Q Consensus       316 ~~P~~RP-----sm~eV~~  329 (342)
                      .+|++||     ++.++++
T Consensus       232 ~dP~~R~~~~~~~~~~ll~  250 (323)
T cd05571         232 KDPKQRLGGGPEDAKEIME  250 (323)
T ss_pred             CCHHHcCCCCCCCHHHHHc
Confidence            9999999     7888864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.75  E-value=5.4e-18  Score=154.11  Aligned_cols=166  Identities=14%  Similarity=0.193  Sum_probs=104.6

Q ss_pred             cccCcCCCeeEEEEEEC-CC-eEEEEEccCCCCCCCc-------c--------------EE-Ee-eCC--cEEE-E----
Q 039505          165 RVPYKGGFITVYHGQLV-KS-EVAMKMLSPSSSQGHV-------P--------------IV-EC-HVG--ALIT-I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~-~~-~vAVK~l~~~~~~~~~-------~--------------Lv-~c-~~~--~lv~-m----  212 (342)
                      +.||+|+||.||+|... ++ .+|||.+.........       +              ++ ++ ..+  .+++ +    
T Consensus         8 ~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~   87 (267)
T cd08229           8 KKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAG   87 (267)
T ss_pred             hhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEEecCCC
Confidence            88999999999999975 44 9999987653221111       1              22 22 222  2332 1    


Q ss_pred             ---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc------ccc
Q 039505          213 ---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH------MST  257 (342)
Q Consensus       213 ---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~------~~~  257 (342)
                                                 +++||+|||+   .+++|+||||+||+++.+.  ++.+++....      ...
T Consensus        88 ~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~  164 (267)
T cd08229          88 DLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAH  164 (267)
T ss_pred             CHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCcccc
Confidence                                       8899999999   9999999999999999883  3333322111      111


Q ss_pred             ccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHH
Q 039505          258 TIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAM  311 (342)
Q Consensus       258 ~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~  311 (342)
                      ...|+..|+|                          ||..|+........ .+. ..+................+.+++.
T Consensus       165 ~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~li~  242 (267)
T cd08229         165 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY-SLC-KKIEQCDYPPLPSDHYSEELRQLVN  242 (267)
T ss_pred             cccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHH-HHh-hhhhcCCCCCCCcccccHHHHHHHH
Confidence            2457777776                          78888754322110 110 0111111111111234456889999


Q ss_pred             HcccccCCCCCCHHHHHHHHHhcc
Q 039505          312 ASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       312 ~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                      +||+.+|++||||.+|++.++++.
T Consensus       243 ~~l~~~p~~Rpt~~~i~~~~~~~~  266 (267)
T cd08229         243 MCINPDPEKRPDITYVYDVAKRMH  266 (267)
T ss_pred             HhcCCCcccCCCHHHHHHHHhhhc
Confidence            999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.74  E-value=5.1e-19  Score=156.43  Aligned_cols=158  Identities=18%  Similarity=0.233  Sum_probs=111.0

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc---------------------------EE-EeeCC---cEEE
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP---------------------------IV-ECHVG---ALIT  211 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~---------------------------Lv-~c~~~---~lv~  211 (342)
                      ++||+|..++|-++.++.+  +.|+|++.........+                           |. +....   ++||
T Consensus        23 eilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~FlVF  102 (411)
T KOG0599|consen   23 EILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAFVFLVF  102 (411)
T ss_pred             HHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcchhhhhh
Confidence            8999999999999998766  99999987654333222                           22 33333   5666


Q ss_pred             --E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCccc-----
Q 039505          212 --I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHMS-----  256 (342)
Q Consensus       212 --m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~~-----  256 (342)
                        |                          +.+|++|||.   ..||||||||+|||+|++  -++.++++..+..     
T Consensus       103 dl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa---~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~GekL  179 (411)
T KOG0599|consen  103 DLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHA---RNIVHRDLKPENILLDDNMNIKISDFGFACQLEPGEKL  179 (411)
T ss_pred             hhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHH---hhhhhcccChhheeeccccceEEeccceeeccCCchhH
Confidence              3                          7889999999   999999999999999999  5556666655433     


Q ss_pred             cccccCcceee--------------------------------cCCCCcccccccccccccccccccc--cCCCCCChHH
Q 039505          257 TTIAGTAGFLN--------------------------------TKNPVISKSIENGNSHLRDKSTVDL--SFKGEFDIIS  302 (342)
Q Consensus       257 ~~~~Gt~~y~a--------------------------------tG~~P~~~~~~~~~~~l~~~~~~d~--~l~~~~~~~~  302 (342)
                      ...||||||+|                                .|.+||.......+.    ..++..  ....+...+.
T Consensus       180 relCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlML----R~ImeGkyqF~speWadi  255 (411)
T KOG0599|consen  180 RELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLML----RMIMEGKYQFRSPEWADI  255 (411)
T ss_pred             HHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHH----HHHHhcccccCCcchhhc
Confidence            34899999999                                566666543211100    111111  1122233445


Q ss_pred             HHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          303 VGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       303 ~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ...+.+++.+|++.||.+|.|.+|+++
T Consensus       256 s~~~KdLIsrlLqVdp~~Ritake~La  282 (411)
T KOG0599|consen  256 SATVKDLISRLLQVDPTKRITAKEALA  282 (411)
T ss_pred             cccHHHHHHHHHeeCchhcccHHHHhc
Confidence            566889999999999999999999874

>PHA02988 hypothetical protein; Provisional

Probab=99.74  E-value=6.3e-18  Score=156.04  Aligned_cols=165  Identities=13%  Similarity=0.043  Sum_probs=110.4

Q ss_pred             cccCcCCCeeEEEEEECCCeEEEEEccCCCCCCC-------cc--------------EE-EeeC----C---cEEE--E-
Q 039505          165 RVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGH-------VP--------------IV-ECHV----G---ALIT--I-  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~~vAVK~l~~~~~~~~-------~~--------------Lv-~c~~----~---~lv~--m-  212 (342)
                      ..||+|++|.||+|.+.+..||||+++.......       ++              ++ +|.+    .   .+++  + 
T Consensus        26 ~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~  105 (283)
T PHA02988         26 VLIKENDQNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCT  105 (283)
T ss_pred             eEEeeCCceEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCC
Confidence            6899999999999999655999999976543221       11              33 3333    1   3333  1 


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc---ccccccC
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM---STTIAGT  262 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~---~~~~~Gt  262 (342)
                                               ++.||.|||+.  .+++||||||+|||++++  .++.+++.....   .....|+
T Consensus       106 ~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~  183 (283)
T PHA02988        106 RGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKY--TNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKNVNF  183 (283)
T ss_pred             CCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhc--CCCCCCcCChhhEEECCCCcEEEcccchHhhhccccccccCc
Confidence                                     88999999972  378899999999999988  455544432211   1224577


Q ss_pred             cceee----------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcc
Q 039505          263 AGFLN----------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASV  314 (342)
Q Consensus       263 ~~y~a----------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl  314 (342)
                      ..|+|                            ||+.||.......   +.. .+.........+..+...+.+++.+||
T Consensus       184 ~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~---~~~-~i~~~~~~~~~~~~~~~~l~~li~~cl  259 (283)
T PHA02988        184 MVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKE---IYD-LIINKNNSLKLPLDCPLEIKCIVEACT  259 (283)
T ss_pred             ccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHH---HHH-HHHhcCCCCCCCCcCcHHHHHHHHHHh
Confidence            77776                            8888887543221   110 111111111122345566889999999


Q ss_pred             cccCCCCCCHHHHHHHHHhcc
Q 039505          315 SSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       315 ~~~P~~RPsm~eV~~~L~~i~  335 (342)
                      +.+|++|||+.|+++.|+.++
T Consensus       260 ~~dp~~Rps~~ell~~l~~~~  280 (283)
T PHA02988        260 SHDSIKRPNIKEILYNLSLYK  280 (283)
T ss_pred             cCCcccCcCHHHHHHHHHHHH
Confidence            999999999999999998765

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.74  E-value=6.8e-18  Score=162.11  Aligned_cols=115  Identities=13%  Similarity=0.209  Sum_probs=75.1

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc--------ccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM--------STTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~--------~~~~~Gt~~y~a---------------  267 (342)
                      +++||+|||+   .+|+||||||+|||++++  .++.+++.....        .....++..|+|               
T Consensus       221 i~~aL~yLH~---~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv  297 (374)
T cd05106         221 VAQGMDFLAS---KNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDV  297 (374)
T ss_pred             HHHHHHHHHH---CCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCCccccH
Confidence            7889999999   999999999999999987  444443322110        111234556887               


Q ss_pred             -----------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhc
Q 039505          268 -----------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQG  334 (342)
Q Consensus       268 -----------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i  334 (342)
                                 | |+.||.......  .+..  ..........+......+.+++.+||+.+|++|||+.+|+++|+++
T Consensus       298 wSlGvil~ellt~G~~Pf~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~  372 (374)
T cd05106         298 WSYGILLWEIFSLGKSPYPGILVNS--KFYK--MVKRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQ  372 (374)
T ss_pred             HHHHHHHHHHHhCCCCCCccccccH--HHHH--HHHcccCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence                       4 888876543221  1111  1111111111112235688999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.74  E-value=5.7e-18  Score=154.34  Aligned_cols=114  Identities=14%  Similarity=0.128  Sum_probs=72.8

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc--------ccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM--------STTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~--------~~~~~Gt~~y~a---------------  267 (342)
                      ++.||+|||+   .+|+||||||+|||++++  .++.+++.....        .....+++.|++               
T Consensus       121 i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di  197 (272)
T cd05075         121 IASGMEYLSS---KSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDV  197 (272)
T ss_pred             HHHHHHHHHH---CCeeccccchhheEEcCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHH
Confidence            7899999999   999999999999999987  344443322111        011223445554               


Q ss_pred             -----------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhc
Q 039505          268 -----------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQG  334 (342)
Q Consensus       268 -----------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i  334 (342)
                                 + |+.|+.......   +.. .+..... ...+......+.+++.+||+.+|++|||+.++++.|+++
T Consensus       198 ~slG~il~el~~~g~~p~~~~~~~~---~~~-~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         198 WSFGVTMWEIATRGQTPYPGVENSE---IYD-YLRQGNR-LKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             HHHHHHHHHHHcCCCCCCCCCCHHH---HHH-HHHcCCC-CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence                       5 677775432211   111 0000000 011223445688999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.74  E-value=5.9e-18  Score=162.55  Aligned_cols=114  Identities=15%  Similarity=0.220  Sum_probs=73.8

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc--------ccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM--------STTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~--------~~~~~Gt~~y~a---------------  267 (342)
                      +++||+|||+   .+|+||||||+|||++++  .++.+++.....        .....++..|+|               
T Consensus       223 i~~~l~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi  299 (375)
T cd05104         223 VAKGMSFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDV  299 (375)
T ss_pred             HHHHHHHHHH---CCeeccCCchhhEEEECCCcEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCH
Confidence            7889999999   999999999999999987  455554433211        111234456887               


Q ss_pred             -----------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHh
Q 039505          268 -----------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQ  333 (342)
Q Consensus       268 -----------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~  333 (342)
                                 | |..|+.......  .+.+  .+........+.....++.+++.+||+.+|++||+|.||++.|++
T Consensus       300 ~slG~~l~ellt~g~~p~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~  373 (375)
T cd05104         300 WSYGILLWEIFSLGSSPYPGMPVDS--KFYK--MIKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ  373 (375)
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCchH--HHHH--HHHhCccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence                       3 666665432211  1111  111111111112224568899999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.74  E-value=6.4e-18  Score=153.36  Aligned_cols=162  Identities=17%  Similarity=0.233  Sum_probs=104.0

Q ss_pred             cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCCc---c--------------EE-EeeCC---cEEE--E--------
Q 039505          165 RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGHV---P--------------IV-ECHVG---ALIT--I--------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~~---~--------------Lv-~c~~~---~lv~--m--------  212 (342)
                      +.||+|+||.||+|.+.++ .||||.++........   +              +. +|...   ++++  +        
T Consensus        12 ~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   91 (261)
T cd05068          12 RKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEY   91 (261)
T ss_pred             EEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccCCcHHHH
Confidence            8999999999999998777 9999998764322111   1              22 33332   2222  1        


Q ss_pred             --------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCccc-------cccccCc
Q 039505          213 --------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHMS-------TTIAGTA  263 (342)
Q Consensus       213 --------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~~~-------~~~~Gt~  263 (342)
                                          ++.||.|||+   .+++||||||+||+++++.  ++.+++......       ....++.
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  168 (261)
T cd05068          92 LQGGAGRALKLPQLIDMAAQVASGMAYLEA---QNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPI  168 (261)
T ss_pred             HhccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCCCcCce
Confidence                                8899999999   8999999999999999883  344332211100       0111223


Q ss_pred             ceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccc
Q 039505          264 GFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSS  316 (342)
Q Consensus       264 ~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~  316 (342)
                      .|+|                          | |+.|+.......   +.  ..++.......+......+.+++.+|++.
T Consensus       169 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~li~~~l~~  243 (261)
T cd05068         169 KWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE---VL--QQVDQGYRMPCPPGCPKELYDIMLDCWKE  243 (261)
T ss_pred             eccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH---HH--HHHHcCCCCCCCCcCCHHHHHHHHHHhhc
Confidence            4655                          5 777776433221   00  01111111112233456688999999999


Q ss_pred             cCCCCCCHHHHHHHHHhc
Q 039505          317 KVNRRPLMNQVVMVREQG  334 (342)
Q Consensus       317 ~P~~RPsm~eV~~~L~~i  334 (342)
                      +|++||++.++++.|+++
T Consensus       244 ~P~~Rp~~~~l~~~l~~~  261 (261)
T cd05068         244 DPDDRPTFETLQWKLEDF  261 (261)
T ss_pred             CcccCCCHHHHHHHHhcC
Confidence            999999999999999863

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.74  E-value=5.5e-18  Score=153.33  Aligned_cols=159  Identities=17%  Similarity=0.186  Sum_probs=101.3

Q ss_pred             cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCC---cc--------------EE-EeeCC---cEEE--E--------
Q 039505          165 RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGH---VP--------------IV-ECHVG---ALIT--I--------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~---~~--------------Lv-~c~~~---~lv~--m--------  212 (342)
                      +.||+|+||.||++.+.++ .+|+|.+........   .+              +. +|...   ++++  +        
T Consensus        10 ~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~   89 (256)
T cd05114          10 KELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNY   89 (256)
T ss_pred             eEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcHHHH
Confidence            7899999999999999887 999998865432111   11              22 33333   3332  1        


Q ss_pred             -------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc-------ccccccCcc
Q 039505          213 -------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM-------STTIAGTAG  264 (342)
Q Consensus       213 -------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~-------~~~~~Gt~~  264 (342)
                                         ++.||+|||+   .+|+||||||+||+++++  .++.+++.....       .....++..
T Consensus        90 ~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~  166 (256)
T cd05114          90 LRQRQGKLSKDMLLSMCQDVCEGMEYLER---NSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVK  166 (256)
T ss_pred             HHhCccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCCCCCchh
Confidence                               8899999999   999999999999999988  344443322111       011223445


Q ss_pred             eee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHccccc
Q 039505          265 FLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSK  317 (342)
Q Consensus       265 y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~  317 (342)
                      |+|                          | |+.|+.......   +.. .+.... ....+......+.+++.+||+.+
T Consensus       167 y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~---~~~-~i~~~~-~~~~~~~~~~~~~~li~~c~~~~  241 (256)
T cd05114         167 WSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYE---VVE-MISRGF-RLYRPKLASMTVYEVMYSCWHEK  241 (256)
T ss_pred             hCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHH---HHH-HHHCCC-CCCCCCCCCHHHHHHHHHHccCC
Confidence            665                          5 777876543221   110 010000 00111122346889999999999


Q ss_pred             CCCCCCHHHHHHHH
Q 039505          318 VNRRPLMNQVVMVR  331 (342)
Q Consensus       318 P~~RPsm~eV~~~L  331 (342)
                      |++||++.++++.|
T Consensus       242 p~~Rps~~~l~~~l  255 (256)
T cd05114         242 PEGRPTFAELLRAI  255 (256)
T ss_pred             cccCcCHHHHHHhh
Confidence            99999999999887

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.74  E-value=5.5e-18  Score=155.48  Aligned_cols=114  Identities=13%  Similarity=0.119  Sum_probs=77.2

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc--------cccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH--------MSTTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~--------~~~~~~Gt~~y~a---------------  267 (342)
                      ++.||+|||+   .+++||||||+||+++++  .++.+++....        ......+++.|+|               
T Consensus       133 l~~al~~lH~---~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv  209 (283)
T cd05048         133 IAAGMEYLSS---HHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDI  209 (283)
T ss_pred             HHHHHHHHHh---CCeeccccccceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhH
Confidence            7899999999   899999999999999988  34444432211        1122345667877               


Q ss_pred             -----------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhc
Q 039505          268 -----------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQG  334 (342)
Q Consensus       268 -----------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i  334 (342)
                                 | |..|+.......   +.  +.+........+..++.++.+++.+||+.+|.+||++.||++.|+.+
T Consensus       210 ~slG~il~el~~~g~~p~~~~~~~~---~~--~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~  283 (283)
T cd05048         210 WSFGVVLWEIFSYGLQPYYGFSNQE---VI--EMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW  283 (283)
T ss_pred             HHHHHHHHHHHcCCCCCCCCCCHHH---HH--HHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence                       4 777776543221   10  01111111222344566799999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.74  E-value=1.2e-18  Score=173.16  Aligned_cols=164  Identities=21%  Similarity=0.211  Sum_probs=106.9

Q ss_pred             HHhhccC--cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCCCcc-----------------EE-Eee----------
Q 039505          158 RVTNNFE--RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQGHVP-----------------IV-ECH----------  205 (342)
Q Consensus       158 ~at~~f~--~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~~~~-----------------Lv-~c~----------  205 (342)
                      ...++|.  +.||+|+||+||+|+... + .||||++..........                 ++ +..          
T Consensus        29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~  108 (496)
T PTZ00283         29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP  108 (496)
T ss_pred             ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence            3445666  899999999999998764 4 99999986543211100                 11 110          


Q ss_pred             CC----cEEE--E------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--Cccc
Q 039505          206 VG----ALIT--I------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRIS  247 (342)
Q Consensus       206 ~~----~lv~--m------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~  247 (342)
                      ..    .+|+  +                              ++.||+|||+   .+|+||||||+|||++.+  .++.
T Consensus       109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~---~~IiHrDLKP~NILl~~~~~vkL~  185 (496)
T PTZ00283        109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHS---KHMIHRDIKSANILLCSNGLVKLG  185 (496)
T ss_pred             ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEeCCCCEEEE
Confidence            00    1111  0                              7899999999   999999999999999988  4555


Q ss_pred             cCCCCCc--------cccccccCcceee--------------------------cCCCCccccccccccccccccccccc
Q 039505          248 PVEGGTH--------MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLS  293 (342)
Q Consensus       248 ~~~~~~~--------~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~  293 (342)
                      +++....        ......||+.|+|                          ||+.||.......   ++. ......
T Consensus       186 DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~---~~~-~~~~~~  261 (496)
T PTZ00283        186 DFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEE---VMH-KTLAGR  261 (496)
T ss_pred             ecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH---HHH-HHhcCC
Confidence            5443211        1233679999998                          8888886543211   111 011100


Q ss_pred             CCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          294 FKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       294 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      . ...+......+.+++..||+.+|++||++.++++
T Consensus       262 ~-~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~  296 (496)
T PTZ00283        262 Y-DPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLN  296 (496)
T ss_pred             C-CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHh
Confidence            1 1122334456889999999999999999999875

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.74  E-value=3.3e-18  Score=161.35  Aligned_cols=163  Identities=17%  Similarity=0.199  Sum_probs=105.1

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-------c--------------EE-EeeCC---cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-------P--------------IV-ECHVG---ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-------~--------------Lv-~c~~~---~lv~--m---  212 (342)
                      +.||+|+||.||+|+...+  .||||+++........       +              ++ ++..+   ++|+  +   
T Consensus         7 ~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~g~   86 (333)
T cd05600           7 TQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPGG   86 (333)
T ss_pred             EEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeCCCCC
Confidence            8899999999999998764  9999998754211100       0              22 33333   3333  1   


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc---cccccccCcc
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH---MSTTIAGTAG  264 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~---~~~~~~Gt~~  264 (342)
                                             ++.||.|||+   .+|+||||||+|||++.+  .++.+++....   ......||+.
T Consensus        87 ~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~~gt~~  163 (333)
T cd05600          87 DFRTLLNNLGVLSEDHARFYMAEMFEAVDALHE---LGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSVVGSPD  163 (333)
T ss_pred             CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCcccCcc
Confidence                                   8899999999   999999999999999988  44555443322   1234678999


Q ss_pred             eee--------------------------cCCCCcccccccc-cccccc-cccccccCCCCCChHHHHHHHHHHHHcccc
Q 039505          265 FLN--------------------------TKNPVISKSIENG-NSHLRD-KSTVDLSFKGEFDIISVGKAVEIAMASVSS  316 (342)
Q Consensus       265 y~a--------------------------tG~~P~~~~~~~~-~~~l~~-~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~  316 (342)
                      |+|                          ||+.|+....... ...+.. ...................+.+++.+|++.
T Consensus       164 y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~  243 (333)
T cd05600         164 YMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLIND  243 (333)
T ss_pred             ccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhC
Confidence            988                          7888876543221 000000 111111110100112345678899999999


Q ss_pred             cCCCCCCHHHHHHH
Q 039505          317 KVNRRPLMNQVVMV  330 (342)
Q Consensus       317 ~P~~RPsm~eV~~~  330 (342)
                      +|++||++.++++.
T Consensus       244 ~~~rr~s~~~ll~h  257 (333)
T cd05600         244 PSRRFGSLEDIKNH  257 (333)
T ss_pred             hhhhcCCHHHHHhC
Confidence            99999999999854

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.74  E-value=9e-19  Score=164.82  Aligned_cols=171  Identities=20%  Similarity=0.183  Sum_probs=109.2

Q ss_pred             cccCcCCCeeEEEEEECCCeEEEEEccCCCCCCCcc--------------EE--EeeCC---------cEEE-E------
Q 039505          165 RVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGHVP--------------IV--ECHVG---------ALIT-I------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~~vAVK~l~~~~~~~~~~--------------Lv--~c~~~---------~lv~-m------  212 (342)
                      ++||+|+||.||||++.+..||||++.....+....              ++  .+.+.         .||. +      
T Consensus       216 eli~~Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL  295 (534)
T KOG3653|consen  216 ELIGRGRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPKGSL  295 (534)
T ss_pred             HHhhcCccceeehhhccCceeEEEecCHHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccCCcH
Confidence            789999999999999998899999998765443322              22  11111         2222 1      


Q ss_pred             --------------------ehhhhhhhhccC------CCCeeeCCCCcceEEecCC--CccccCC--------CCCccc
Q 039505          213 --------------------PKEGLEYLHQGL------KHPIIQRDMKSTNILLNEK--SRISPVE--------GGTHMS  256 (342)
Q Consensus       213 --------------------ia~gL~yLH~~~------~~~IiHrDlKp~NILLd~~--a~~~~~~--------~~~~~~  256 (342)
                                          +++||+|||++.      +++|+|||||++|||+.+|  +-+.+++        ......
T Consensus       296 ~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~  375 (534)
T KOG3653|consen  296 CDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDT  375 (534)
T ss_pred             HHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCCCcch
Confidence                                899999999864      4589999999999999999  2222222        122223


Q ss_pred             cccccCcceee---------------------------------------cCCCC-cccccccc---------ccccccc
Q 039505          257 TTIAGTAGFLN---------------------------------------TKNPV-ISKSIENG---------NSHLRDK  287 (342)
Q Consensus       257 ~~~~Gt~~y~a---------------------------------------tG~~P-~~~~~~~~---------~~~l~~~  287 (342)
                      ...+||..|||                                       +|..| |...++..         +..++-.
T Consensus       376 ~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~  455 (534)
T KOG3653|consen  376 HGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVR  455 (534)
T ss_pred             hhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHh
Confidence            34789999999                                       23222 11111110         0001102


Q ss_pred             ccccccCCCCCC-hHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhcc
Q 039505          288 STVDLSFKGEFD-IISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       288 ~~~d~~l~~~~~-~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                      +-..|.++..+. ...+..+.+.+-.||+.||+.|-|+.=|-+++.++.
T Consensus       456 kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~  504 (534)
T KOG3653|consen  456 KKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELM  504 (534)
T ss_pred             hccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHh
Confidence            333344433221 234667888999999999999999887777666554

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.73  E-value=7.6e-18  Score=154.99  Aligned_cols=162  Identities=16%  Similarity=0.178  Sum_probs=102.4

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc------c-----------E---E-EeeCC---cEEE--E----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV------P-----------I---V-ECHVG---ALIT--I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~------~-----------L---v-~c~~~---~lv~--m----  212 (342)
                      +.||+|+||+||+|+...+  .||||+++........      +           +   . ++...   ++|+  +    
T Consensus         7 ~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   86 (287)
T cd07848           7 GVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKNM   86 (287)
T ss_pred             EEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecCCCCH
Confidence            8899999999999999755  8999998754322110      1           1   1 22222   3333  1    


Q ss_pred             ----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-------ccccccc
Q 039505          213 ----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-------MSTTIAG  261 (342)
Q Consensus       213 ----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-------~~~~~~G  261 (342)
                                            ++.||+|||+   .+|+||||||+||+++.+  .++.+++....       ......|
T Consensus        87 l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~  163 (287)
T cd07848          87 LELLEEMPNGVPPEKVRSYIYQLIKAIHWCHK---NDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVA  163 (287)
T ss_pred             HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccCccccccccccccccccc
Confidence                                  8899999999   999999999999999988  34444433221       1122468


Q ss_pred             Ccceee--------------------------cCCCCcccccccc-cccccc-----------ccccccc--------CC
Q 039505          262 TAGFLN--------------------------TKNPVISKSIENG-NSHLRD-----------KSTVDLS--------FK  295 (342)
Q Consensus       262 t~~y~a--------------------------tG~~P~~~~~~~~-~~~l~~-----------~~~~d~~--------l~  295 (342)
                      |+.|+|                          +|+.||....... ...+..           ....++.        ..
T Consensus       164 ~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (287)
T cd07848         164 TRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVN  243 (287)
T ss_pred             ccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCccc
Confidence            888888                          8998886543211 000000           0000000        00


Q ss_pred             CC------CChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          296 GE------FDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       296 ~~------~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ..      ........+.+++.+|++.+|++|||+.|+++
T Consensus       244 ~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~  283 (287)
T cd07848         244 HPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN  283 (287)
T ss_pred             CcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            00      00112345889999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.73  E-value=7.3e-18  Score=155.32  Aligned_cols=162  Identities=16%  Similarity=0.251  Sum_probs=101.4

Q ss_pred             cccCcCCCeeEEEEEEC-C-C-eEEEEEccCCCCCCCc------c-----------------EE-EeeC-----C---cE
Q 039505          165 RVPYKGGFITVYHGQLV-K-S-EVAMKMLSPSSSQGHV------P-----------------IV-ECHV-----G---AL  209 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~-~-~-~vAVK~l~~~~~~~~~------~-----------------Lv-~c~~-----~---~l  209 (342)
                      +.||+|+||+||+|+.. . + .||||+++........      +                 ++ +|..     .   ++
T Consensus         7 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~l   86 (290)
T cd07862           7 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTL   86 (290)
T ss_pred             eEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEEE
Confidence            78999999999999874 3 3 8999998654322110      0                 33 3421     1   33


Q ss_pred             EE--E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc----
Q 039505          210 IT--I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH----  254 (342)
Q Consensus       210 v~--m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~----  254 (342)
                      ++  +                           +++||+|||+   .+|+||||||+|||++++  .++.+++....    
T Consensus        87 v~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  163 (290)
T cd07862          87 VFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ  163 (290)
T ss_pred             EEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEcCCCCEEEccccceEeccCC
Confidence            33  1                           8899999999   999999999999999988  44444432211    


Q ss_pred             -cccccccCcceee--------------------------cCCCCcccccccc-cccccc-----------------ccc
Q 039505          255 -MSTTIAGTAGFLN--------------------------TKNPVISKSIENG-NSHLRD-----------------KST  289 (342)
Q Consensus       255 -~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~-~~~l~~-----------------~~~  289 (342)
                       ......||+.|+|                          ||++||....... ...+.+                 ...
T Consensus       164 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  243 (290)
T cd07862         164 MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQA  243 (290)
T ss_pred             cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchh
Confidence             1223568888888                          8888887543211 001110                 000


Q ss_pred             ccccCCC---CCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          290 VDLSFKG---EFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       290 ~d~~l~~---~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ..+....   .........+.+++.+|++.+|++|||+.|+++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  286 (290)
T cd07862         244 FHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  286 (290)
T ss_pred             ccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence            0000000   000112345678999999999999999999975

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.73  E-value=7.6e-18  Score=158.80  Aligned_cols=155  Identities=19%  Similarity=0.213  Sum_probs=101.3

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-------c--------------EE-EeeCC---cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-------P--------------IV-ECHVG---ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-------~--------------Lv-~c~~~---~lv~--m---  212 (342)
                      ++||+|+||.||++....+  .||||++.........       +              +. ++...   ++|+  +   
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            4689999999999998654  9999999754211111       0              22 22222   3333  1   


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------ccccccc
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIAG  261 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~G  261 (342)
                                             ++.||+|||+   .+|+||||||+|||++.+  .++.+++....      ......|
T Consensus        81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~g  157 (328)
T cd05593          81 ELFFHLSRERVFSEDRTRFYGAEIVSALDYLHS---GKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCG  157 (328)
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccC
Confidence                                   8899999999   999999999999999987  44544443211      1123568


Q ss_pred             Ccceee--------------------------cCCCCcccccccccccccc-cccccccCCCCCChHHHHHHHHHHHHcc
Q 039505          262 TAGFLN--------------------------TKNPVISKSIENGNSHLRD-KSTVDLSFKGEFDIISVGKAVEIAMASV  314 (342)
Q Consensus       262 t~~y~a--------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~l~~~~~~~~~~~l~~l~~~Cl  314 (342)
                      |+.|+|                          ||+.||.......   +.. ....+..+    +......+.+++.+|+
T Consensus       158 t~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~---~~~~~~~~~~~~----p~~~~~~~~~li~~~L  230 (328)
T cd05593         158 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK---LFELILMEDIKF----PRTLSADAKSLLSGLL  230 (328)
T ss_pred             CcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHH---HHHHhccCCccC----CCCCCHHHHHHHHHHc
Confidence            999998                          7888876433211   000 00011112    2223345788999999


Q ss_pred             cccCCCCC-----CHHHHHH
Q 039505          315 SSKVNRRP-----LMNQVVM  329 (342)
Q Consensus       315 ~~~P~~RP-----sm~eV~~  329 (342)
                      +.+|++||     ++.|+++
T Consensus       231 ~~dP~~R~~~~~~~~~~il~  250 (328)
T cd05593         231 IKDPNKRLGGGPDDAKEIMR  250 (328)
T ss_pred             CCCHHHcCCCCCCCHHHHhc
Confidence            99999997     7888875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.73  E-value=8.4e-18  Score=152.47  Aligned_cols=161  Identities=18%  Similarity=0.189  Sum_probs=103.5

Q ss_pred             cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCCc---c-----------EE----EeeCC--cEEE--E---------
Q 039505          165 RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGHV---P-----------IV----ECHVG--ALIT--I---------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~~---~-----------Lv----~c~~~--~lv~--m---------  212 (342)
                      ++||+|+||.||+|...++ .||+|.+.........   +           ++    +....  ++++  +         
T Consensus        12 ~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~~   91 (260)
T cd05067          12 KKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVTQEPIYIITEYMENGSLVDFL   91 (260)
T ss_pred             eeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEccCCcEEEEEcCCCCCHHHHH
Confidence            8999999999999998887 9999998764432111   1           22    11111  3333  1         


Q ss_pred             -------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc-------cccccccCcc
Q 039505          213 -------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH-------MSTTIAGTAG  264 (342)
Q Consensus       213 -------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~-------~~~~~~Gt~~  264 (342)
                                         ++.||+|||+   .+++||||||+||+++++.  ++.+++....       ......++..
T Consensus        92 ~~~~~~~~~~~~~~~i~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  168 (260)
T cd05067          92 KTPEGIKLTINKLIDMAAQIAEGMAFIER---KNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIK  168 (260)
T ss_pred             HhcCCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccCCccccc
Confidence                               8899999999   8999999999999999883  3333222111       0011233445


Q ss_pred             eee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHccccc
Q 039505          265 FLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSK  317 (342)
Q Consensus       265 y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~  317 (342)
                      |+|                          | |+.|+.......   +..  .+......+.+.....++.+++.+|++.+
T Consensus       169 y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~li~~~l~~~  243 (260)
T cd05067         169 WTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPE---VIQ--NLERGYRMPRPDNCPEELYELMRLCWKEK  243 (260)
T ss_pred             ccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHH---HHH--HHHcCCCCCCCCCCCHHHHHHHHHHccCC
Confidence            655                          5 888876543221   111  00111111112223456899999999999


Q ss_pred             CCCCCCHHHHHHHHHh
Q 039505          318 VNRRPLMNQVVMVREQ  333 (342)
Q Consensus       318 P~~RPsm~eV~~~L~~  333 (342)
                      |++||++.++...|+.
T Consensus       244 p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         244 PEERPTFEYLRSVLED  259 (260)
T ss_pred             hhhCCCHHHHHHHhhc
Confidence            9999999999999875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.73  E-value=3e-18  Score=168.06  Aligned_cols=172  Identities=14%  Similarity=0.173  Sum_probs=106.9

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc--------------EE-Ee-e---C--C-----cEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP--------------IV-EC-H---V--G-----ALI  210 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~--------------Lv-~c-~---~--~-----~lv  210 (342)
                      .+|.  ++||+|+||.||+|....+  .||||++.........+              +. ++ .   .  .     .+|
T Consensus        66 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lv  145 (440)
T PTZ00036         66 KSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVV  145 (440)
T ss_pred             CeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEE
Confidence            3455  8999999999999998654  99999886543211112              22 11 1   0  0     122


Q ss_pred             E--E-----------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC---CccccCCCCCc--
Q 039505          211 T--I-----------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK---SRISPVEGGTH--  254 (342)
Q Consensus       211 ~--m-----------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~---a~~~~~~~~~~--  254 (342)
                      +  +                             +++||+|||+   .+|+||||||+|||++.+   .++.+++....  
T Consensus       146 mE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~---~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~  222 (440)
T PTZ00036        146 MEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHS---KFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLL  222 (440)
T ss_pred             EecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCcCHHHEEEcCCCCceeeeccccchhcc
Confidence            2  1                             7899999999   999999999999999865   45555554321  


Q ss_pred             ---cccccccCcceee---------------------------cCCCCcccccccc-cccccc---------cccccc--
Q 039505          255 ---MSTTIAGTAGFLN---------------------------TKNPVISKSIENG-NSHLRD---------KSTVDL--  292 (342)
Q Consensus       255 ---~~~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~-~~~l~~---------~~~~d~--  292 (342)
                         ......||+.|+|                           ||++||....... ...+++         .....+  
T Consensus       223 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~  302 (440)
T PTZ00036        223 AGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNY  302 (440)
T ss_pred             CCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhh
Confidence               1123567888888                           8888887543211 000000         000000  


Q ss_pred             ------cCC-----CCCChHHHHHHHHHHHHcccccCCCCCCHHHHHH--HHHhcc
Q 039505          293 ------SFK-----GEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM--VREQGN  335 (342)
Q Consensus       293 ------~l~-----~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~--~L~~i~  335 (342)
                            ...     ...+.....++.+++.+||+.+|.+|||+.|+++  .++.++
T Consensus       303 ~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~  358 (440)
T PTZ00036        303 ADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLR  358 (440)
T ss_pred             hcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhh
Confidence                  000     0011123456889999999999999999999983  344443

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.73  E-value=1.9e-17  Score=150.15  Aligned_cols=169  Identities=16%  Similarity=0.245  Sum_probs=106.1

Q ss_pred             hccC--cccCcCCCeeEEEEEEC-CC-eEEEEEccCCCCCCCc---c---------------EE----EeeCC---cEEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLV-KS-EVAMKMLSPSSSQGHV---P---------------IV----ECHVG---ALIT  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~-~~-~vAVK~l~~~~~~~~~---~---------------Lv----~c~~~---~lv~  211 (342)
                      ++|.  +.||+|+||.||+|... ++ .||+|.++........   .               ++    ++...   .+++
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~   81 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL   81 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            3455  89999999999999987 44 9999988643221111   0               11    11111   2222


Q ss_pred             --E------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc---
Q 039505          212 --I------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH---  254 (342)
Q Consensus       212 --m------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~---  254 (342)
                        +                              +++||.|||+   .+|+||||||+||+++.+.  ++.+++....   
T Consensus        82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~  158 (267)
T cd08224          82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHS---KRIMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHh---CCEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence              1                              8899999999   9999999999999999873  3333322111   


Q ss_pred             ---cccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCCh-HHHH
Q 039505          255 ---MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDI-ISVG  304 (342)
Q Consensus       255 ---~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~-~~~~  304 (342)
                         ......|++.|+|                          ||+.|+........ .+.+ ....... ...+. ....
T Consensus       159 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~-~~~~~~~-~~~~~~~~~~  235 (267)
T cd08224         159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY-SLCK-KIEKCDY-PPLPADHYSE  235 (267)
T ss_pred             CCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHH-HHHh-hhhcCCC-CCCChhhcCH
Confidence               1122456777766                          77777654321110 0000 0000001 11111 3445


Q ss_pred             HHHHHHHHcccccCCCCCCHHHHHHHHHhcc
Q 039505          305 KAVEIAMASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       305 ~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                      .+.+++.+||..+|++||++.+|+++|+.++
T Consensus       236 ~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~  266 (267)
T cd08224         236 ELRDLVSRCINPDPEKRPDISYVLQVAKEMH  266 (267)
T ss_pred             HHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence            6889999999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.73  E-value=1.3e-17  Score=155.13  Aligned_cols=166  Identities=17%  Similarity=0.234  Sum_probs=103.3

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-----c--------------EE-EeeCC---cEEE--
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-----P--------------IV-ECHVG---ALIT--  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-----~--------------Lv-~c~~~---~lv~--  211 (342)
                      ++|.  +.||+|+||.||+|+...+  .||||++.........     +              +. ++...   ++|+  
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (303)
T cd07869           5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEY   84 (303)
T ss_pred             ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEEC
Confidence            4555  8999999999999998744  8999998754322111     1              22 33322   3333  


Q ss_pred             E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc------ccc
Q 039505          212 I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH------MST  257 (342)
Q Consensus       212 m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~------~~~  257 (342)
                      +                          ++.||+|||+   .+|+||||||+|||++++.  ++.+++....      ...
T Consensus        85 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~  161 (303)
T cd07869          85 VHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQ---RYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYS  161 (303)
T ss_pred             CCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCC
Confidence            1                          8899999999   9999999999999999873  4444432211      112


Q ss_pred             ccccCcceee---------------------------cCCCCcccccccc--cccccc---------------ccccccc
Q 039505          258 TIAGTAGFLN---------------------------TKNPVISKSIENG--NSHLRD---------------KSTVDLS  293 (342)
Q Consensus       258 ~~~Gt~~y~a---------------------------tG~~P~~~~~~~~--~~~l~~---------------~~~~d~~  293 (342)
                      ...||+.|+|                           ||+.||....+..  ...+..               ....++.
T Consensus       162 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (303)
T cd07869         162 NEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPE  241 (303)
T ss_pred             CCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccc
Confidence            2457778887                           8998887532210  000000               0000000


Q ss_pred             -CC--CCCCh-------HHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          294 -FK--GEFDI-------ISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       294 -l~--~~~~~-------~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                       ..  .....       .....+.+++.+|++.+|++|||+.|+++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~  287 (303)
T cd07869         242 RFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS  287 (303)
T ss_pred             cccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence             00  00000       01235778999999999999999999985

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.73  E-value=8.9e-18  Score=151.48  Aligned_cols=161  Identities=16%  Similarity=0.215  Sum_probs=100.7

Q ss_pred             cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCCCcc-------------------EE-EeeCC---cEEE--E-----
Q 039505          165 RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQGHVP-------------------IV-ECHVG---ALIT--I-----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~---~lv~--m-----  212 (342)
                      +.||+|+||.||+|.+.. + .||+|.+..........                   ++ +|...   ++|+  +     
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF   80 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence            469999999999999864 4 89999876432211111                   33 44333   3333  1     


Q ss_pred             ----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCcccc--------ccc
Q 039505          213 ----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHMST--------TIA  260 (342)
Q Consensus       213 ----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~~~~--------~~~  260 (342)
                                            +++||+|||+   .+|+||||||+|||++.+.  ++.+++.......        ...
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  157 (252)
T cd05084          81 LTFLRTEGPRLKVKELIQMVENAAAGMEYLES---KHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQ  157 (252)
T ss_pred             HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCC
Confidence                                  8899999999   9999999999999999883  4444332211000        011


Q ss_pred             cCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHc
Q 039505          261 GTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMAS  313 (342)
Q Consensus       261 Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~C  313 (342)
                      ++..|+|                          + |..|+........     ...+........+......+.+++.+|
T Consensus       158 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~li~~~  232 (252)
T cd05084         158 IPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQT-----REAIEQGVRLPCPELCPDAVYRLMERC  232 (252)
T ss_pred             CceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHH-----HHHHHcCCCCCCcccCCHHHHHHHHHH
Confidence            2234655                          3 6666654322110     011111111122333456788999999


Q ss_pred             ccccCCCCCCHHHHHHHHHh
Q 039505          314 VSSKVNRRPLMNQVVMVREQ  333 (342)
Q Consensus       314 l~~~P~~RPsm~eV~~~L~~  333 (342)
                      ++.+|++|||+.++.++|+.
T Consensus       233 l~~~p~~Rps~~~~~~~l~~  252 (252)
T cd05084         233 WEYDPGQRPSFSTVHQELQS  252 (252)
T ss_pred             cCCChhhCcCHHHHHHHHhC
Confidence            99999999999999999863

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.73  E-value=8.3e-18  Score=154.19  Aligned_cols=169  Identities=15%  Similarity=0.237  Sum_probs=107.7

Q ss_pred             hccC--cccCcCCCeeEEEEEECC-----C-eEEEEEccCCCCCCCcc-------------------EE-EeeCC----c
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVK-----S-EVAMKMLSPSSSQGHVP-------------------IV-ECHVG----A  208 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~-----~-~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~----~  208 (342)
                      ++|.  ++||+|+||.||+|.+..     . .||+|++.........+                   ++ +|...    +
T Consensus         6 ~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~   85 (280)
T cd05043           6 DRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPF   85 (280)
T ss_pred             hheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCE
Confidence            3444  899999999999999876     4 89999987542211110                   33 44331    2


Q ss_pred             EEE--E----------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCC
Q 039505          209 LIT--I----------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVE  250 (342)
Q Consensus       209 lv~--m----------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~  250 (342)
                      +++  +                                  ++.||+|||+   .+++||||||+||+++++  .++.+++
T Consensus        86 ~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kl~d~g  162 (280)
T cd05043          86 VLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHK---RGVIHKDIAARNCVIDEELQVKITDNA  162 (280)
T ss_pred             EEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCHhhEEEcCCCcEEECCCC
Confidence            222  0                                  8899999999   999999999999999987  3444333


Q ss_pred             CCCcc--------ccccccCcceee--------------------------c-CCCCcccccccccccccccccccccCC
Q 039505          251 GGTHM--------STTIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFK  295 (342)
Q Consensus       251 ~~~~~--------~~~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~  295 (342)
                      .....        .....++..|+|                          | |+.|+.......   +..  .+.....
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~--~~~~~~~  237 (280)
T cd05043         163 LSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFE---MAA--YLKDGYR  237 (280)
T ss_pred             CcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHH---HHH--HHHcCCC
Confidence            22110        111234555666                          5 888876532211   111  0000011


Q ss_pred             CCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccCC
Q 039505          296 GEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNGS  337 (342)
Q Consensus       296 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~~  337 (342)
                      ......+...+.+++.+||+.+|++|||+.++++.|+.+.+.
T Consensus       238 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~  279 (280)
T cd05043         238 LAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ  279 (280)
T ss_pred             CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence            111222345688999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.73  E-value=1.1e-17  Score=147.36  Aligned_cols=100  Identities=21%  Similarity=0.340  Sum_probs=69.5

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc--------------------EE--EeeCC--cEEE--E----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP--------------------IV--ECHVG--ALIT--I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~--------------------Lv--~c~~~--~lv~--m----  212 (342)
                      +.+|+|.||.||+|+...+  .||||+++.....+.-.                    |+  |-..+  .+|+  |    
T Consensus         8 ~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm~tdL   87 (318)
T KOG0659|consen    8 EKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFMPTDL   87 (318)
T ss_pred             hhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEeccccH
Confidence            7899999999999998655  99999998764332111                    33  22222  4555  3    


Q ss_pred             ----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCC------CccccccccC
Q 039505          213 ----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGG------THMSTTIAGT  262 (342)
Q Consensus       213 ----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~------~~~~~~~~Gt  262 (342)
                                            +.+||+|||+   ..|+||||||.|+|++++.  |+.+++..      ....+..+-|
T Consensus        88 e~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~---~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~~V~T  164 (318)
T KOG0659|consen   88 EVVIKDKNIILSPADIKSYMLMTLKGLAYCHS---KWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTHQVVT  164 (318)
T ss_pred             HHHhcccccccCHHHHHHHHHHHHHHHHHHHh---hhhhcccCCccceEEcCCCcEEeecccchhccCCCCcccccceee
Confidence                                  8899999999   9999999999999999983  33332211      1112223567


Q ss_pred             cceee
Q 039505          263 AGFLN  267 (342)
Q Consensus       263 ~~y~a  267 (342)
                      .+|.|
T Consensus       165 RWYRA  169 (318)
T KOG0659|consen  165 RWYRA  169 (318)
T ss_pred             eeccC
Confidence            78887

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.73  E-value=6.6e-18  Score=158.33  Aligned_cols=155  Identities=21%  Similarity=0.265  Sum_probs=99.1

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCC--Cc-----c---------------EE-EeeCC---cEEE--E--
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQG--HV-----P---------------IV-ECHVG---ALIT--I--  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~--~~-----~---------------Lv-~c~~~---~lv~--m--  212 (342)
                      ++||+|+||+||+|....+  .||||+++......  ..     +               +. ++..+   ++|+  +  
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            4699999999999998765  89999987532110  00     0               12 22222   3333  1  


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------cccccc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIA  260 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~  260 (342)
                                              ++.||+|||+   .+|+||||||+|||++.+  .++.+++....      ......
T Consensus        81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~  157 (316)
T cd05592          81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHK---KGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFC  157 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCcccccc
Confidence                                    8899999999   999999999999999988  44444443211      123357


Q ss_pred             cCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcc
Q 039505          261 GTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASV  314 (342)
Q Consensus       261 Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl  314 (342)
                      ||+.|+|                          +|+.||.......   +.. .+...  ....+......+.+++.+||
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~---~~~-~i~~~--~~~~~~~~~~~~~~ll~~~l  231 (316)
T cd05592         158 GTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDE---LFD-SILND--RPHFPRWISKEAKDCLSKLF  231 (316)
T ss_pred             CCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHH---HHH-HHHcC--CCCCCCCCCHHHHHHHHHHc
Confidence            8999998                          7888876543221   000 00000  01112223445778899999


Q ss_pred             cccCCCCCCHH-HHH
Q 039505          315 SSKVNRRPLMN-QVV  328 (342)
Q Consensus       315 ~~~P~~RPsm~-eV~  328 (342)
                      +.+|++||++. ++.
T Consensus       232 ~~~P~~R~~~~~~l~  246 (316)
T cd05592         232 ERDPTKRLGVDGDIR  246 (316)
T ss_pred             cCCHHHcCCChHHHH
Confidence            99999999875 443

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.73  E-value=7.7e-18  Score=158.12  Aligned_cols=156  Identities=22%  Similarity=0.287  Sum_probs=101.0

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-------c---------------EE-EeeCC---cEEE--E--
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-------P---------------IV-ECHVG---ALIT--I--  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-------~---------------Lv-~c~~~---~lv~--m--  212 (342)
                      ++||+|+||.||+|+...+  .||||+++........       +               +. ++...   ++|+  +  
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            4799999999999998765  8999998753211000       0               22 22222   3333  1  


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------cccccc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIA  260 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~  260 (342)
                                              +++||.|||+   .+|+||||||+|||++.+  .++.+++....      ......
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~  157 (321)
T cd05591          81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHR---HGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFC  157 (321)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeecccceecccCCccccccc
Confidence                                    8899999999   999999999999999988  44444442211      122356


Q ss_pred             cCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcc
Q 039505          261 GTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASV  314 (342)
Q Consensus       261 Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl  314 (342)
                      ||+.|+|                          ||+.|+.......   +.. .+.....  ..+......+.+++..|+
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~---~~~-~i~~~~~--~~p~~~~~~~~~ll~~~L  231 (321)
T cd05591         158 GTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDD---LFE-SILHDDV--LYPVWLSKEAVSILKAFM  231 (321)
T ss_pred             cCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHH---HHH-HHHcCCC--CCCCCCCHHHHHHHHHHh
Confidence            8999998                          8888887544222   010 0111000  011122345788999999


Q ss_pred             cccCCCCC-------CHHHHHH
Q 039505          315 SSKVNRRP-------LMNQVVM  329 (342)
Q Consensus       315 ~~~P~~RP-------sm~eV~~  329 (342)
                      +.+|++||       ++.++++
T Consensus       232 ~~dp~~R~~~~~~~~~~~~~~~  253 (321)
T cd05591         232 TKNPNKRLGCVASQGGEDAIKQ  253 (321)
T ss_pred             ccCHHHcCCCCCCCCCHHHHhc
Confidence            99999999       7777763

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.73  E-value=4.5e-18  Score=159.04  Aligned_cols=153  Identities=22%  Similarity=0.209  Sum_probs=98.0

Q ss_pred             cCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-------c-----------EE----EeeCC---cEEE--E-----
Q 039505          167 PYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-------P-----------IV----ECHVG---ALIT--I-----  212 (342)
Q Consensus       167 lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-------~-----------Lv----~c~~~---~lv~--m-----  212 (342)
                      ||+|+||.||+|+...+  .||+|+++........       +           ++    ++...   ++|+  +     
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            79999999999998765  8999998653211100       1           22    23322   3333  1     


Q ss_pred             ---------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------cccccccCc
Q 039505          213 ---------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIAGTA  263 (342)
Q Consensus       213 ---------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~Gt~  263 (342)
                                           +++||+|||+   .+|+||||||+|||++.+  .++.+++....      ......||+
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  157 (312)
T cd05585          81 FHHLQREGRFDLSRARFYTAELLCALENLHK---FNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTP  157 (312)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCc
Confidence                                 7899999999   999999999999999988  44444443221      122357899


Q ss_pred             ceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHccccc
Q 039505          264 GFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSK  317 (342)
Q Consensus       264 ~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~  317 (342)
                      .|+|                          ||+.||.......   +.. .+.....  ..+......+.+++.+||+.+
T Consensus       158 ~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~---~~~-~~~~~~~--~~~~~~~~~~~~li~~~L~~d  231 (312)
T cd05585         158 EYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNE---MYR-KILQEPL--RFPDGFDRDAKDLLIGLLSRD  231 (312)
T ss_pred             ccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHH---HHH-HHHcCCC--CCCCcCCHHHHHHHHHHcCCC
Confidence            9998                          7888876532211   000 1111111  112223345788999999999


Q ss_pred             CCCCCC---HHHHH
Q 039505          318 VNRRPL---MNQVV  328 (342)
Q Consensus       318 P~~RPs---m~eV~  328 (342)
                      |++||+   +.|++
T Consensus       232 p~~R~~~~~~~e~l  245 (312)
T cd05585         232 PTRRLGYNGAQEIK  245 (312)
T ss_pred             HHHcCCCCCHHHHH
Confidence            999986   45554

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.73  E-value=4.9e-18  Score=159.59  Aligned_cols=151  Identities=20%  Similarity=0.223  Sum_probs=99.8

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-------c------------E---E-EeeCC---cEEE--E--
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-------P------------I---V-ECHVG---ALIT--I--  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-------~------------L---v-~c~~~---~lv~--m--  212 (342)
                      +.||+|+||.||+|....+  .||||+++........       +            +   . ++...   ++|+  +  
T Consensus         6 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   85 (323)
T cd05616           6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVNG   85 (323)
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCCC
Confidence            7899999999999998765  8999998754211110       0            1   1 22222   3333  1  


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------cccccc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIA  260 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~  260 (342)
                                              ++.||+|||+   .+|+||||||+|||++++  .++.+++....      ......
T Consensus        86 g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~~~~  162 (323)
T cd05616          86 GDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKTFC  162 (323)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCccccCC
Confidence                                    8899999999   999999999999999998  44444432211      122357


Q ss_pred             cCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcc
Q 039505          261 GTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASV  314 (342)
Q Consensus       261 Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl  314 (342)
                      ||+.|+|                          ||+.|+.......   +. ..+.....  ..+......+.+++.+|+
T Consensus       163 gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~---~~-~~i~~~~~--~~p~~~s~~~~~li~~~l  236 (323)
T cd05616         163 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE---LF-QSIMEHNV--AYPKSMSKEAVAICKGLM  236 (323)
T ss_pred             CChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHH---HH-HHHHhCCC--CCCCcCCHHHHHHHHHHc
Confidence            8999998                          8888887543221   11 01111111  112233456789999999


Q ss_pred             cccCCCCCCH
Q 039505          315 SSKVNRRPLM  324 (342)
Q Consensus       315 ~~~P~~RPsm  324 (342)
                      +.+|++|++.
T Consensus       237 ~~~p~~R~~~  246 (323)
T cd05616         237 TKHPGKRLGC  246 (323)
T ss_pred             ccCHHhcCCC
Confidence            9999999974

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.73  E-value=4e-18  Score=156.27  Aligned_cols=160  Identities=19%  Similarity=0.241  Sum_probs=105.4

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc--------------EE-Ee-eCC-------cEEE--E-----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP--------------IV-EC-HVG-------ALIT--I-----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~--------------Lv-~c-~~~-------~lv~--m-----  212 (342)
                      +++|.|+||.||+|.+...  .||||+.-.+..-...|              |+ +. ...       .+|+  |     
T Consensus        30 ~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~tL~  109 (364)
T KOG0658|consen   30 RLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMPETLY  109 (364)
T ss_pred             EEEeecccceEEEEEEcCCCceeEEEEecCCCCcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhchHHHH
Confidence            8999999999999998766  99999987766544444              44 22 221       1222  2     


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC---CccccCCCCCcc-----ccccc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK---SRISPVEGGTHM-----STTIA  260 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~---a~~~~~~~~~~~-----~~~~~  260 (342)
                                              +.+||+|||+   .+|.||||||+|+|+|.+   .|+.+++.+...     ..+..
T Consensus       110 ~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~---~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epniSYi  186 (364)
T KOG0658|consen  110 RVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHS---HGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPNISYI  186 (364)
T ss_pred             HHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHh---cCcccCCCChheEEEcCCCCeEEeccCCcceeeccCCCceeEE
Confidence                                    8999999999   999999999999999998   455555443221     12233


Q ss_pred             cCcceee---------------------------cCCCCcccccccccccccc--------------------ccccccc
Q 039505          261 GTAGFLN---------------------------TKNPVISKSIENGNSHLRD--------------------KSTVDLS  293 (342)
Q Consensus       261 Gt~~y~a---------------------------tG~~P~~~~~~~~~~~l~~--------------------~~~~d~~  293 (342)
                      -|..|.|                           -|++-|.+.....  +++.                    .+.-.|.
T Consensus       187 cSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~d--QL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~  264 (364)
T KOG0658|consen  187 CSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVD--QLVEIIKVLGTPTREDIKSMNPNYTEFKFPQ  264 (364)
T ss_pred             EeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHH--HHHHHHHHhCCCCHHHHhhcCcccccccCcc
Confidence            4555665                           5565555543322  2222                    1112222


Q ss_pred             CCCC-----CChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          294 FKGE-----FDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       294 l~~~-----~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      +...     .......+.++++.++++.+|.+|.++.|++.
T Consensus       265 ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~  305 (364)
T KOG0658|consen  265 IKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA  305 (364)
T ss_pred             cccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence            2221     12234456889999999999999999998874

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.73  E-value=7.5e-18  Score=153.47  Aligned_cols=168  Identities=20%  Similarity=0.262  Sum_probs=105.1

Q ss_pred             HHHHhhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc------------------EE-EeeCC---cE
Q 039505          156 SLRVTNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP------------------IV-ECHVG---AL  209 (342)
Q Consensus       156 l~~at~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~------------------Lv-~c~~~---~l  209 (342)
                      ++.+++++.  ..||+|+||.||+|.+..+  .||+|.+........+.                  ++ +|..+   ++
T Consensus         3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   82 (268)
T cd06624           3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI   82 (268)
T ss_pred             cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence            345677776  8999999999999997655  89999887653322111                  22 33333   33


Q ss_pred             EE--E-----------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC---CccccCCCCCc-
Q 039505          210 IT--I-----------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK---SRISPVEGGTH-  254 (342)
Q Consensus       210 v~--m-----------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~---a~~~~~~~~~~-  254 (342)
                      ++  +                             +++||+|||+   .+|+||||||+||+++.+   .++.+++.... 
T Consensus        83 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~  159 (268)
T cd06624          83 FMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHD---NQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRL  159 (268)
T ss_pred             EEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCeEEEecchhheec
Confidence            32  1                             8899999999   999999999999999864   34443332211 


Q ss_pred             -----cccccccCcceee----------------------------cCCCCcccccccccccccccccccccCCCCCChH
Q 039505          255 -----MSTTIAGTAGFLN----------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDII  301 (342)
Q Consensus       255 -----~~~~~~Gt~~y~a----------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~  301 (342)
                           ......|+..|+|                            +|+.|+........ ........  ......+..
T Consensus       160 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~-~~~~~~~~--~~~~~~~~~  236 (268)
T cd06624         160 AGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA-AMFKVGMF--KIHPEIPES  236 (268)
T ss_pred             ccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh-hHhhhhhh--ccCCCCCcc
Confidence                 0112345666665                            67777654321110 00000000  011122333


Q ss_pred             HHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          302 SVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       302 ~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ....+.+++.+||+.+|++|||+.|++.
T Consensus       237 ~~~~~~~li~~~l~~~p~~Rpt~~~ll~  264 (268)
T cd06624         237 LSAEAKNFILRCFEPDPDKRASAHDLLQ  264 (268)
T ss_pred             cCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence            4456889999999999999999999875

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.73  E-value=1.6e-17  Score=150.58  Aligned_cols=161  Identities=16%  Similarity=0.190  Sum_probs=104.5

Q ss_pred             cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCC---cc-----------E---E-EeeCC--cEEE--E---------
Q 039505          165 RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGH---VP-----------I---V-ECHVG--ALIT--I---------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~---~~-----------L---v-~c~~~--~lv~--m---------  212 (342)
                      +.||+|+||.||+|...++ .+|+|.+........   .+           +   . ++...  ++++  +         
T Consensus        12 ~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~~   91 (260)
T cd05070          12 KKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVSEEPIYIVTEYMSKGSLLDFL   91 (260)
T ss_pred             heeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEECCCCcEEEEEecCCCcHHHHH
Confidence            8899999999999998877 999999876433211   11           2   2 33222  3333  1         


Q ss_pred             -------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCcc-------ccccccCcc
Q 039505          213 -------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHM-------STTIAGTAG  264 (342)
Q Consensus       213 -------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~~-------~~~~~Gt~~  264 (342)
                                         ++.||+|||+   .+++||||||+||+++++.  ++.+++.....       .....++..
T Consensus        92 ~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  168 (260)
T cd05070          92 KDGEGRALKLPNLVDMAAQVAAGMAYIER---MNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIK  168 (260)
T ss_pred             HhcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEEeCCceEEeCCceeeeeccCcccccccCCCCCcc
Confidence                               8899999999   8999999999999999883  33333222110       011223455


Q ss_pred             eee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHccccc
Q 039505          265 FLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSK  317 (342)
Q Consensus       265 y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~  317 (342)
                      |+|                          | |+.|+.......   +.  +.+......+.+......+.+++.+|++.+
T Consensus       169 y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  243 (260)
T cd05070         169 WTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE---VL--EQVERGYRMPCPQDCPISLHELMLQCWKKD  243 (260)
T ss_pred             ccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHH---HH--HHHHcCCCCCCCCcCCHHHHHHHHHHcccC
Confidence            766                          5 777775432211   00  111111112223344566899999999999


Q ss_pred             CCCCCCHHHHHHHHHh
Q 039505          318 VNRRPLMNQVVMVREQ  333 (342)
Q Consensus       318 P~~RPsm~eV~~~L~~  333 (342)
                      |++|||+.++.+.|+.
T Consensus       244 p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         244 PEERPTFEYLQSFLED  259 (260)
T ss_pred             cccCcCHHHHHHHHhc
Confidence            9999999999999875

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.73  E-value=1.3e-18  Score=166.74  Aligned_cols=156  Identities=21%  Similarity=0.222  Sum_probs=110.6

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc--------------------------------EE--EeeCC-
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP--------------------------------IV--ECHVG-  207 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~--------------------------------Lv--~c~~~-  207 (342)
                      +.||+|+||.||||+-+.+  .||+|.+.+......+-                                ++  ||.+. 
T Consensus         8 e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~g~L   87 (808)
T KOG0597|consen    8 EMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAVGDL   87 (808)
T ss_pred             HHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhhhhH
Confidence            7899999999999998877  89999998765443111                                22  44443 


Q ss_pred             --cEEE---E-----------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------cccccccCc
Q 039505          208 --ALIT---I-----------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIAGTA  263 (342)
Q Consensus       208 --~lv~---m-----------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~Gt~  263 (342)
                        +|-+   |           +..||.|||+   .+|+|||+||.||||+..  .|+.+++....      ..+.+.|||
T Consensus        88 ~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs---~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsikGtP  164 (808)
T KOG0597|consen   88 FTILEQDGKLPEEQVRAIAYDLVSALYYLHS---NRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSIKGTP  164 (808)
T ss_pred             HHHHHhccCCCHHHHHHHHHHHHHHHHHHHh---cCcccccCCcceeeecCCCceeechhhhhhhcccCceeeeeccCcc
Confidence              2222   1           7789999999   999999999999999998  66666554433      335578999


Q ss_pred             ceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHccccc
Q 039505          264 GFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSK  317 (342)
Q Consensus       264 ~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~  317 (342)
                      .|||                          +|++||....--   +++..-.-||..   ++......+..+....+.+|
T Consensus       165 lYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~---~Lv~~I~~d~v~---~p~~~S~~f~nfl~gLL~kd  238 (808)
T KOG0597|consen  165 LYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSIT---QLVKSILKDPVK---PPSTASSSFVNFLQGLLIKD  238 (808)
T ss_pred             cccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHH---HHHHHHhcCCCC---CcccccHHHHHHHHHHhhcC
Confidence            9999                          899998754211   222211222222   23344555778888889999


Q ss_pred             CCCCCCHHHHHH
Q 039505          318 VNRRPLMNQVVM  329 (342)
Q Consensus       318 P~~RPsm~eV~~  329 (342)
                      |.+|.|..+++.
T Consensus       239 P~~RltW~~Ll~  250 (808)
T KOG0597|consen  239 PAQRLTWTDLLG  250 (808)
T ss_pred             hhhcccHHHHhc
Confidence            999999988753

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.73  E-value=1.3e-17  Score=154.00  Aligned_cols=162  Identities=19%  Similarity=0.238  Sum_probs=101.4

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-----c-----------EE----EeeCC---cEEE--E-----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-----P-----------IV----ECHVG---ALIT--I-----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-----~-----------Lv----~c~~~---~lv~--m-----  212 (342)
                      +.||+|+||+||+|....+  .||+|+++........     +           ++    ++...   ++|+  +     
T Consensus        11 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~l~   90 (288)
T cd07871          11 DKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLDSDLK   90 (288)
T ss_pred             eEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCCcCHH
Confidence            8899999999999998755  9999998754322111     1           22    22222   3333  1     


Q ss_pred             ---------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------cccccccCc
Q 039505          213 ---------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIAGTA  263 (342)
Q Consensus       213 ---------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~Gt~  263 (342)
                                           +++||+|||+   .+|+||||||+|||++++  .++.+++....      ......|++
T Consensus        91 ~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~  167 (288)
T cd07871          91 QYLDNCGNLMSMHNVKIFMFQLLRGLSYCHK---RKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVVTL  167 (288)
T ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCccccCceecc
Confidence                                 8999999999   999999999999999988  44444332211      112245777


Q ss_pred             ceee---------------------------cCCCCcccccccc-cccccc-------------------cccccccCCC
Q 039505          264 GFLN---------------------------TKNPVISKSIENG-NSHLRD-------------------KSTVDLSFKG  296 (342)
Q Consensus       264 ~y~a---------------------------tG~~P~~~~~~~~-~~~l~~-------------------~~~~d~~l~~  296 (342)
                      .|+|                           ||+.||....... ...+..                   .....+....
T Consensus       168 ~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (288)
T cd07871         168 WYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRA  247 (288)
T ss_pred             cccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCC
Confidence            7877                           8988886543211 000000                   0000111100


Q ss_pred             C----CChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          297 E----FDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       297 ~----~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      .    ........+.+++.+|++.+|.+|||+.|+++
T Consensus       248 ~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~  284 (288)
T cd07871         248 QPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR  284 (288)
T ss_pred             CchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            0    00112345789999999999999999999974

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.73  E-value=9.4e-18  Score=154.07  Aligned_cols=113  Identities=12%  Similarity=0.110  Sum_probs=74.5

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc--------ccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM--------STTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~--------~~~~~Gt~~y~a---------------  267 (342)
                      +++||+|||+   .+|+||||||+|||++++  .++.+++.....        .....+++.|+|               
T Consensus       133 l~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv  209 (283)
T cd05091         133 IAAGMEFLSS---HHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDI  209 (283)
T ss_pred             HHHHHHHHHH---cCccccccchhheEecCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhH
Confidence            7899999999   999999999999999987  445444422110        112334567777               


Q ss_pred             -----------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHh
Q 039505          268 -----------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQ  333 (342)
Q Consensus       268 -----------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~  333 (342)
                                 | |..|+.......   +. ..+.+... ...+..+...+.+++..||+.+|++||++.+|+..|+.
T Consensus       210 ~slG~~l~el~~~g~~p~~~~~~~~---~~-~~i~~~~~-~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         210 WSYGVVLWEVFSYGLQPYCGYSNQD---VI-EMIRNRQV-LPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             HHHHHHHHHHHcCCCCCCCCCCHHH---HH-HHHHcCCc-CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence                       4 566655432211   11 11111111 12233455668899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.73  E-value=1.4e-17  Score=149.86  Aligned_cols=160  Identities=16%  Similarity=0.212  Sum_probs=102.6

Q ss_pred             cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCCc-----c--------------EE-EeeCC---cEEE--E------
Q 039505          165 RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGHV-----P--------------IV-ECHVG---ALIT--I------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~~-----~--------------Lv-~c~~~---~lv~--m------  212 (342)
                      ++||+|+||.||+|...++ .+|+|.++........     +              ++ +|...   ++++  +      
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   80 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL   80 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence            4799999999999998777 9999998765422111     1              33 44333   3333  1      


Q ss_pred             ---------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCccc-------cccccC
Q 039505          213 ---------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHMS-------TTIAGT  262 (342)
Q Consensus       213 ---------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~~~-------~~~~Gt  262 (342)
                                           ++.||.|||+   .+++||||||+||+++++.  ++.+++......       ....++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~  157 (250)
T cd05085          81 SFLRKKKDELKTKQLVKFALDAAAGMAYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIP  157 (250)
T ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCc
Confidence                                 7889999999   9999999999999999883  444443221110       111234


Q ss_pred             cceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHccc
Q 039505          263 AGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVS  315 (342)
Q Consensus       263 ~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~  315 (342)
                      ..|+|                          | |..|+.......   .  ...+........+......+.+++.+|++
T Consensus       158 ~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~li~~~l~  232 (250)
T cd05085         158 IKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ---A--REQVEKGYRMSCPQKCPDDVYKVMQRCWD  232 (250)
T ss_pred             ccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH---H--HHHHHcCCCCCCCCCCCHHHHHHHHHHcc
Confidence            45665                          4 666765432111   0  00011111112223345678999999999


Q ss_pred             ccCCCCCCHHHHHHHHH
Q 039505          316 SKVNRRPLMNQVVMVRE  332 (342)
Q Consensus       316 ~~P~~RPsm~eV~~~L~  332 (342)
                      .+|++||++.++++.|.
T Consensus       233 ~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         233 YKPENRPKFSELQKELA  249 (250)
T ss_pred             cCcccCCCHHHHHHHhc
Confidence            99999999999999875

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.72  E-value=6.8e-18  Score=161.21  Aligned_cols=155  Identities=19%  Similarity=0.226  Sum_probs=105.5

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCC----CCc-----c---------------------------EE--Ee
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQ----GHV-----P---------------------------IV--EC  204 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~----~~~-----~---------------------------Lv--~c  204 (342)
                      +.||+|+||+|+.|++..+  .||||+++.....    ...     +                           ++  ||
T Consensus        23 ~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ivmEy~  102 (370)
T KOG0583|consen   23 RTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIYIVMEYC  102 (370)
T ss_pred             eeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEEEEEEec
Confidence            8999999999999987654  9999987764111    111     1                           22  55


Q ss_pred             eCC-cEEE------E-----------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-C--ccccCCCCCc------ccc
Q 039505          205 HVG-ALIT------I-----------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-S--RISPVEGGTH------MST  257 (342)
Q Consensus       205 ~~~-~lv~------m-----------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-a--~~~~~~~~~~------~~~  257 (342)
                      .++ ++-|      +           ++.|++|||+   ++|+||||||+|||||.+ .  ++.+++.+..      ...
T Consensus       103 ~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~---~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~~~l~  179 (370)
T KOG0583|consen  103 SGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHS---RGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPGEDGLLK  179 (370)
T ss_pred             CCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEecCCCCCEEEeccccccccCCCCCccc
Confidence            543 2222      0           8999999999   999999999999999987 4  4455544432      224


Q ss_pred             ccccCcceee----------------------------cCCCCcccccccccccccccccccccCCCCCChHH-HHHHHH
Q 039505          258 TIAGTAGFLN----------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIIS-VGKAVE  308 (342)
Q Consensus       258 ~~~Gt~~y~a----------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~-~~~l~~  308 (342)
                      +.+||+.|+|                            +|+.||+......   +. ..+.....  ..+... ..++..
T Consensus       180 t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~---l~-~ki~~~~~--~~p~~~~S~~~~~  253 (370)
T KOG0583|consen  180 TFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPN---LY-RKIRKGEF--KIPSYLLSPEARS  253 (370)
T ss_pred             CCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHH---HH-HHHhcCCc--cCCCCcCCHHHHH
Confidence            5799999999                            7777777632111   00 01111111  111222 566889


Q ss_pred             HHHHcccccCCCCCCHHHHH
Q 039505          309 IAMASVSSKVNRRPLMNQVV  328 (342)
Q Consensus       309 l~~~Cl~~~P~~RPsm~eV~  328 (342)
                      ++.+|+..+|.+|+|+.+|+
T Consensus       254 Li~~mL~~~P~~R~t~~~i~  273 (370)
T KOG0583|consen  254 LIEKMLVPDPSTRITLLEIL  273 (370)
T ss_pred             HHHHHcCCCcccCCCHHHHh
Confidence            99999999999999999998

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.72  E-value=4.4e-18  Score=159.98  Aligned_cols=151  Identities=21%  Similarity=0.233  Sum_probs=98.2

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC---c----c------------EE----EeeCC---cEEE--E--
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH---V----P------------IV----ECHVG---ALIT--I--  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~---~----~------------Lv----~c~~~---~lv~--m--  212 (342)
                      +.||+|+||.||+|+...+  .||||++........   .    +            ++    ++...   ++|+  +  
T Consensus         6 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   85 (324)
T cd05587           6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNG   85 (324)
T ss_pred             EEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCCCC
Confidence            7899999999999998765  899999875321100   0    0            11    12222   3333  1  


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------cccccc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIA  260 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~  260 (342)
                                              +++||+|||+   .+|+||||||+|||++++  .++.+++....      ......
T Consensus        86 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~  162 (324)
T cd05587          86 GDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRTFC  162 (324)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCceeeec
Confidence                                    8899999999   999999999999999988  44444442211      122356


Q ss_pred             cCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcc
Q 039505          261 GTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASV  314 (342)
Q Consensus       261 Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl  314 (342)
                      ||+.|+|                          ||+.||.......   +.. .+....  ...+......+.+++.+|+
T Consensus       163 gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~---~~~-~i~~~~--~~~~~~~~~~~~~li~~~l  236 (324)
T cd05587         163 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE---LFQ-SIMEHN--VSYPKSLSKEAVSICKGLL  236 (324)
T ss_pred             CCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH---HHH-HHHcCC--CCCCCCCCHHHHHHHHHHh
Confidence            8999988                          8888886543221   000 111111  1112223445788999999


Q ss_pred             cccCCCCCCH
Q 039505          315 SSKVNRRPLM  324 (342)
Q Consensus       315 ~~~P~~RPsm  324 (342)
                      +.+|++||+.
T Consensus       237 ~~~P~~R~~~  246 (324)
T cd05587         237 TKHPAKRLGC  246 (324)
T ss_pred             hcCHHHcCCC
Confidence            9999999975

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.72  E-value=9.2e-19  Score=164.88  Aligned_cols=160  Identities=18%  Similarity=0.200  Sum_probs=104.2

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc------------------EE-----EeeCC---cEEE--E--
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP------------------IV-----ECHVG---ALIT--I--  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~------------------Lv-----~c~~~---~lv~--m--  212 (342)
                      +.||.|.||.||+|+-...  .||||+++..... .++                  +|     +....   ++|+  |  
T Consensus        16 ~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~Md~   94 (538)
T KOG0661|consen   16 RKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFMDC   94 (538)
T ss_pred             HHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhhhh
Confidence            8899999999999987655  9999999876422 111                  22     11111   4444  4  


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCccc-----ccccc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHMS-----TTIAG  261 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~~-----~~~~G  261 (342)
                                              |++||+|+|.   +|+.|||+||+|||+..+  -|+.+++......     +..+.
T Consensus        95 NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk---~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPYTeYVS  171 (538)
T KOG0661|consen   95 NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHK---HGFFHRDLKPENILISGNDVIKIADFGLAREVRSKPPYTEYVS  171 (538)
T ss_pred             hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHh---cCcccccCChhheEecccceeEecccccccccccCCCcchhhh
Confidence                                    9999999999   999999999999999954  5666665543322     34678


Q ss_pred             Ccceee---------------------------cCCCCcccccccccccccc----------------------cccccc
Q 039505          262 TAGFLN---------------------------TKNPVISKSIENGNSHLRD----------------------KSTVDL  292 (342)
Q Consensus       262 t~~y~a---------------------------tG~~P~~~~~~~~~~~l~~----------------------~~~~d~  292 (342)
                      |.+|.|                           +=++-|.+..+-.  ++..                      ..+.-|
T Consensus       172 TRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~D--qi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P  249 (538)
T KOG0661|consen  172 TRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEID--QIYKICEVLGTPDKDSWPEGYNLASAMNFRFP  249 (538)
T ss_pred             cccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHH--HHHHHHHHhCCCccccchhHHHHHHHhccCCC
Confidence            899998                           1122222221111  1111                      111111


Q ss_pred             cCCCC----CChHHHHHHHHHHHHcccccCCCCCCHHHHHHH
Q 039505          293 SFKGE----FDIISVGKAVEIAMASVSSKVNRRPLMNQVVMV  330 (342)
Q Consensus       293 ~l~~~----~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~  330 (342)
                      ...+.    .-..+..++++++.+|++.||.+|||+.|+++.
T Consensus       250 ~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~  291 (538)
T KOG0661|consen  250 QVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH  291 (538)
T ss_pred             cCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence            11111    112256678999999999999999999998864

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.72  E-value=1.5e-17  Score=150.67  Aligned_cols=164  Identities=21%  Similarity=0.264  Sum_probs=100.8

Q ss_pred             cccCcCCCeeEEEEEECC----C-eEEEEEccCCCCCCCc-----c--------------EE-EeeCC----cEEE--E-
Q 039505          165 RVPYKGGFITVYHGQLVK----S-EVAMKMLSPSSSQGHV-----P--------------IV-ECHVG----ALIT--I-  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~----~-~vAVK~l~~~~~~~~~-----~--------------Lv-~c~~~----~lv~--m-  212 (342)
                      ++||+|+||.||+|.+.+    . .||+|++.........     +              ++ +|...    ++++  + 
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            479999999999998642    2 7999998543211100     0              23 34321    2332  1 


Q ss_pred             --------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCcc---------
Q 039505          213 --------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHM---------  255 (342)
Q Consensus       213 --------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~~---------  255 (342)
                                                +++||+|||+   .+++||||||+|||++++.  ++.+++.....         
T Consensus        81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~  157 (262)
T cd05058          81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLAS---KKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVH  157 (262)
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCccccccccCCcceeec
Confidence                                      8999999999   8999999999999999883  44443322110         


Q ss_pred             -ccccccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHH
Q 039505          256 -STTIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAV  307 (342)
Q Consensus       256 -~~~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~  307 (342)
                       .....++..|+|                          | |.+|+......   .+.. .+.... ....+...+..+.
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~---~~~~-~~~~~~-~~~~~~~~~~~~~  232 (262)
T cd05058         158 NHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSF---DITV-YLLQGR-RLLQPEYCPDPLY  232 (262)
T ss_pred             ccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHH---HHHH-HHhcCC-CCCCCCcCCHHHH
Confidence             012334556776                          5 34444432111   0110 010100 0111122345688


Q ss_pred             HHHHHcccccCCCCCCHHHHHHHHHhccC
Q 039505          308 EIAMASVSSKVNRRPLMNQVVMVREQGNG  336 (342)
Q Consensus       308 ~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~  336 (342)
                      +++..||+.+|++||++.+|+..|+++..
T Consensus       233 ~li~~cl~~~p~~Rp~~~~il~~l~~~~~  261 (262)
T cd05058         233 EVMLSCWHPKPEMRPTFSELVSRIEQIFS  261 (262)
T ss_pred             HHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence            99999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.72  E-value=1.1e-17  Score=156.90  Aligned_cols=154  Identities=19%  Similarity=0.219  Sum_probs=100.0

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCC---CCCc----c---------------EE-EeeCC---cEEE--E--
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSS---QGHV----P---------------IV-ECHVG---ALIT--I--  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~---~~~~----~---------------Lv-~c~~~---~lv~--m--  212 (342)
                      ++||+|+||.||+|+...+  .||||+++....   ....    +               ++ ++...   ++|+  +  
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            4799999999999998755  899999875321   0000    0               22 22222   2333  1  


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------cccccc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIA  260 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~  260 (342)
                                              +++||+|||+   .+|+||||||+|||++.+  .++.+++....      ......
T Consensus        81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  157 (316)
T cd05620          81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHS---KGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFC  157 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccC
Confidence                                    8899999999   999999999999999988  44444432211      123367


Q ss_pred             cCcceee--------------------------cCCCCcccccccccccccc-cccccccCCCCCChHHHHHHHHHHHHc
Q 039505          261 GTAGFLN--------------------------TKNPVISKSIENGNSHLRD-KSTVDLSFKGEFDIISVGKAVEIAMAS  313 (342)
Q Consensus       261 Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~l~~~~~~~~~~~l~~l~~~C  313 (342)
                      ||+.|+|                          ||+.||.......   +.. .....+.+    +.....++.+++.+|
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~---~~~~~~~~~~~~----~~~~~~~~~~li~~~  230 (316)
T cd05620         158 GTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDE---LFESIRVDTPHY----PRWITKESKDILEKL  230 (316)
T ss_pred             CCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH---HHHHHHhCCCCC----CCCCCHHHHHHHHHH
Confidence            8999998                          7888886543221   111 01111222    112334578899999


Q ss_pred             ccccCCCCCCHH-HHH
Q 039505          314 VSSKVNRRPLMN-QVV  328 (342)
Q Consensus       314 l~~~P~~RPsm~-eV~  328 (342)
                      |+.+|++||++. ++.
T Consensus       231 l~~dP~~R~~~~~~~~  246 (316)
T cd05620         231 FERDPTRRLGVVGNIR  246 (316)
T ss_pred             ccCCHHHcCCChHHHH
Confidence            999999999974 554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.72  E-value=2.8e-17  Score=151.03  Aligned_cols=167  Identities=17%  Similarity=0.168  Sum_probs=104.1

Q ss_pred             cccCcCCCeeEEEEEEC-----CC-eEEEEEccCCCCCCCc-----c--------------EE-EeeCC-----cEEE--
Q 039505          165 RVPYKGGFITVYHGQLV-----KS-EVAMKMLSPSSSQGHV-----P--------------IV-ECHVG-----ALIT--  211 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~-----~~-~vAVK~l~~~~~~~~~-----~--------------Lv-~c~~~-----~lv~--  211 (342)
                      +.||+|+||+||++...     ++ .||+|.++........     +              +. +|...     ++++  
T Consensus        10 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~   89 (283)
T cd05080          10 RVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEY   89 (283)
T ss_pred             eecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEEecC
Confidence            78999999999887532     33 8999998764321111     1              22 44332     2333  


Q ss_pred             E-------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc---------
Q 039505          212 I-------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM---------  255 (342)
Q Consensus       212 m-------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~---------  255 (342)
                      +                         +++||+|||+   .+|+||||||+|||++++  .++.+++.....         
T Consensus        90 ~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~  166 (283)
T cd05080          90 VPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHS---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV  166 (283)
T ss_pred             CCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccChheEEEcCCCcEEEeecccccccCCcchhhcc
Confidence            1                         8899999999   899999999999999987  344433322110         


Q ss_pred             ccccccCcceee--------------------------cCCCCcccccccccccccc-----------cccccccCCCCC
Q 039505          256 STTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRD-----------KSTVDLSFKGEF  298 (342)
Q Consensus       256 ~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~-----------~~~~d~~l~~~~  298 (342)
                      .....++..|++                          ||+.|+........ .+..           .+.++.......
T Consensus       167 ~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (283)
T cd05080         167 REDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFE-EMIGPKQGQMTVVRLIELLERGMRLPC  245 (283)
T ss_pred             CCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhh-hhhcccccccchhhhhhhhhcCCCCCC
Confidence            011123344555                          88888654321110 0000           111111111122


Q ss_pred             ChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhcc
Q 039505          299 DIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       299 ~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                      +......+.+++..||+.+|++|||+.++++.|+++.
T Consensus       246 ~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~  282 (283)
T cd05080         246 PKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH  282 (283)
T ss_pred             CCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence            3344567999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.72  E-value=2.4e-17  Score=149.95  Aligned_cols=162  Identities=14%  Similarity=0.188  Sum_probs=104.6

Q ss_pred             cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCCc---c--------------EE-EeeCC--cEEE--E---------
Q 039505          165 RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGHV---P--------------IV-ECHVG--ALIT--I---------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~~---~--------------Lv-~c~~~--~lv~--m---------  212 (342)
                      +.||+|+||+||+|.+.++ .||+|+++........   +              +. ++.+.  ++++  +         
T Consensus        12 ~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~~   91 (262)
T cd05071          12 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFL   91 (262)
T ss_pred             eecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEECCCCcEEEEEcCCCCcHHHHH
Confidence            8899999999999998777 9999999754321110   1              22 22222  2332  1         


Q ss_pred             -------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCcc-------ccccccCcc
Q 039505          213 -------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHM-------STTIAGTAG  264 (342)
Q Consensus       213 -------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~~-------~~~~~Gt~~  264 (342)
                                         +++||+|||+   .+++||||||+||+++++.  ++.+++.....       .....++..
T Consensus        92 ~~~~~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~  168 (262)
T cd05071          92 KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK  168 (262)
T ss_pred             hhccccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcccEEEcCCCcEEeccCCceeeccccccccccCCcccce
Confidence                               8899999999   9999999999999999883  33333322110       011234556


Q ss_pred             eee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHccccc
Q 039505          265 FLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSK  317 (342)
Q Consensus       265 y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~  317 (342)
                      |++                          | |+.|+.......   +.. .+ ...............+.+++.+|++.+
T Consensus       169 y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~---~~~-~~-~~~~~~~~~~~~~~~l~~li~~~l~~~  243 (262)
T cd05071         169 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---VLD-QV-ERGYRMPCPPECPESLHDLMCQCWRKE  243 (262)
T ss_pred             ecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH---HHH-HH-hcCCCCCCccccCHHHHHHHHHHccCC
Confidence            766                          5 777775443221   000 00 000111122344566889999999999


Q ss_pred             CCCCCCHHHHHHHHHhc
Q 039505          318 VNRRPLMNQVVMVREQG  334 (342)
Q Consensus       318 P~~RPsm~eV~~~L~~i  334 (342)
                      |++||++.++.+.|+..
T Consensus       244 p~~Rp~~~~~~~~l~~~  260 (262)
T cd05071         244 PEERPTFEYLQAFLEDY  260 (262)
T ss_pred             cccCCCHHHHHHHHHHh
Confidence            99999999999999863

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.72  E-value=1.4e-17  Score=152.72  Aligned_cols=167  Identities=17%  Similarity=0.182  Sum_probs=104.9

Q ss_pred             HhhccC--cccCcCCCeeEEEEEECC-----C--eEEEEEccCCCCCCCcc----------------E---E-EeeCC--
Q 039505          159 VTNNFE--RVPYKGGFITVYHGQLVK-----S--EVAMKMLSPSSSQGHVP----------------I---V-ECHVG--  207 (342)
Q Consensus       159 at~~f~--~~lG~G~fG~Vykg~~~~-----~--~vAVK~l~~~~~~~~~~----------------L---v-~c~~~--  207 (342)
                      .+++|.  +.||+|+||.||+|.+..     .  .||+|.+..........                +   + ++.+.  
T Consensus         4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   83 (277)
T cd05036           4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP   83 (277)
T ss_pred             CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence            345666  899999999999999865     3  89999886543221110                2   2 22222  


Q ss_pred             -cEEE--E---------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-----Ccc
Q 039505          208 -ALIT--I---------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-----SRI  246 (342)
Q Consensus       208 -~lv~--m---------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-----a~~  246 (342)
                       ++++  +                                 ++.||+|||+   .+++||||||+|||++.+     .++
T Consensus        84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~nil~~~~~~~~~~kl  160 (277)
T cd05036          84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEE---NHFIHRDIAARNCLLTCKGPGRVAKI  160 (277)
T ss_pred             cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchheEEEeccCCCcceEe
Confidence             2222  1                                 7899999999   899999999999999865     344


Q ss_pred             ccCCCCCccc--------cccccCcceee--------------------------c-CCCCccccccccccccccccccc
Q 039505          247 SPVEGGTHMS--------TTIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVD  291 (342)
Q Consensus       247 ~~~~~~~~~~--------~~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d  291 (342)
                      .+++......        ....++..|+|                          | |+.||.......   +..  .+.
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~---~~~--~~~  235 (277)
T cd05036         161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE---VME--FVT  235 (277)
T ss_pred             ccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---HHH--HHH
Confidence            4443322110        01122345655                          3 777776543221   111  111


Q ss_pred             ccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHh
Q 039505          292 LSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQ  333 (342)
Q Consensus       292 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~  333 (342)
                      .......+......+.+++.+|++.+|++||++.+|++.|+.
T Consensus       236 ~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~  277 (277)
T cd05036         236 GGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY  277 (277)
T ss_pred             cCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence            111112233345668899999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.72  E-value=9.3e-18  Score=157.59  Aligned_cols=151  Identities=21%  Similarity=0.251  Sum_probs=97.9

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCC---Cc----c---------------EE-EeeCC---cEEE--E--
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQG---HV----P---------------IV-ECHVG---ALIT--I--  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~---~~----~---------------Lv-~c~~~---~lv~--m--  212 (342)
                      ++||+|+||+||+|+...+  .||||+++......   ..    +               +. ++...   ++|+  +  
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            4799999999999998754  89999986432100   00    0               22 22222   3333  1  


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------cccccc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIA  260 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~  260 (342)
                                              ++.||+|||+   .+|+||||||+|||++.+  .++.+++....      ......
T Consensus        81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~---~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~  157 (320)
T cd05590          81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFC  157 (320)
T ss_pred             chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccc
Confidence                                    8899999999   999999999999999988  44444432211      123357


Q ss_pred             cCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcc
Q 039505          261 GTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASV  314 (342)
Q Consensus       261 Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl  314 (342)
                      ||+.|+|                          ||+.||.......   +.. .+.....  ..+......+.+++.+|+
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~---~~~-~i~~~~~--~~~~~~~~~~~~li~~~L  231 (320)
T cd05590         158 GTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDD---LFE-AILNDEV--VYPTWLSQDAVDILKAFM  231 (320)
T ss_pred             cCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH---HHH-HHhcCCC--CCCCCCCHHHHHHHHHHc
Confidence            8999998                          8888887543221   010 0111100  111123345788999999


Q ss_pred             cccCCCCCCH
Q 039505          315 SSKVNRRPLM  324 (342)
Q Consensus       315 ~~~P~~RPsm  324 (342)
                      +.+|++||++
T Consensus       232 ~~dP~~R~~~  241 (320)
T cd05590         232 TKNPTMRLGS  241 (320)
T ss_pred             ccCHHHCCCC
Confidence            9999999997

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.72  E-value=5.5e-18  Score=160.55  Aligned_cols=158  Identities=16%  Similarity=0.181  Sum_probs=101.3

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-------c--------------EE-EeeCC---cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-------P--------------IV-ECHVG---ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-------~--------------Lv-~c~~~---~lv~--m---  212 (342)
                      +.||+|+||+||+|....+  .||||+++........       +              +. .+..+   ++|+  +   
T Consensus         7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~   86 (350)
T cd05573           7 KVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEYMPGG   86 (350)
T ss_pred             EEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcCCCCC
Confidence            8899999999999998744  9999998754211100       0              11 22222   2332  1   


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-------------
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-------------  254 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-------------  254 (342)
                                             +++||+|||+   .+|+||||||+|||++.+  .++.+++....             
T Consensus        87 ~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~---~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~  163 (350)
T cd05573          87 DLMNLLIRKDVFPEETARFYIAELVLALDSVHK---LGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLND  163 (350)
T ss_pred             CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcccccccc
Confidence                                   8999999999   999999999999999988  34444332211             


Q ss_pred             ----------------------cccccccCcceee--------------------------cCCCCcccccccccccccc
Q 039505          255 ----------------------MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRD  286 (342)
Q Consensus       255 ----------------------~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~  286 (342)
                                            ......||+.|+|                          ||+.||.......  ..  
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~--~~--  239 (350)
T cd05573         164 SHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQE--TY--  239 (350)
T ss_pred             cccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHH--HH--
Confidence                                  1123568999988                          8888876543221  00  


Q ss_pred             ccccc--ccCCCCCChHHHHHHHHHHHHcccccCCCCCC-HHHHHHH
Q 039505          287 KSTVD--LSFKGEFDIISVGKAVEIAMASVSSKVNRRPL-MNQVVMV  330 (342)
Q Consensus       287 ~~~~d--~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs-m~eV~~~  330 (342)
                      ..+..  ..+...........+.+++..|++ +|++||+ +.++++.
T Consensus       240 ~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h  285 (350)
T cd05573         240 NKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH  285 (350)
T ss_pred             HHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence            01111  111111111134557888899997 9999999 9999863

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.72  E-value=2.1e-17  Score=149.62  Aligned_cols=163  Identities=17%  Similarity=0.189  Sum_probs=103.3

Q ss_pred             cccCcCCCeeEEEEEECCC-----eEEEEEccCCCCCCCcc----------------EE----EeeCC--cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVKS-----EVAMKMLSPSSSQGHVP----------------IV----ECHVG--ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~-----~vAVK~l~~~~~~~~~~----------------Lv----~c~~~--~lv~--m---  212 (342)
                      ++||+|+||.||+|.+...     .+|+|.+.........+                ++    +|...  .+++  +   
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~   80 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKGEPLMLVMELAPLG   80 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcCCceEEEEEeCCCC
Confidence            4799999999999976321     79999987655421111                22    33322  3333  1   


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCcc---------ccc
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHM---------STT  258 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~~---------~~~  258 (342)
                                             ++.||+|||+   .+++||||||+|||++.+.  ++.+++.....         ...
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~  157 (257)
T cd05060          81 PLLKYLKKRREIPVSDLKELAHQVAMGMAYLES---KHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTA  157 (257)
T ss_pred             cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhh---cCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccC
Confidence                                   8999999999   8999999999999999883  33333221110         001


Q ss_pred             cccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHH
Q 039505          259 IAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAM  311 (342)
Q Consensus       259 ~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~  311 (342)
                      ..++..|+|                          | |+.|+.......   +..  .+........+......+.+++.
T Consensus       158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~l~~li~  232 (257)
T cd05060         158 GRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAE---VIA--MLESGERLPRPEECPQEIYSIML  232 (257)
T ss_pred             ccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHH---HHH--HHHcCCcCCCCCCCCHHHHHHHH
Confidence            112344655                          5 888876543221   111  00000011122334456889999


Q ss_pred             HcccccCCCCCCHHHHHHHHHhcc
Q 039505          312 ASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       312 ~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                      +||+.+|++||++.++++.|+++.
T Consensus       233 ~cl~~~p~~Rp~~~~l~~~l~~~~  256 (257)
T cd05060         233 SCWKYRPEDRPTFSELESTFRRDP  256 (257)
T ss_pred             HHhcCChhhCcCHHHHHHHHHhcc
Confidence            999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.72  E-value=1.4e-17  Score=150.59  Aligned_cols=162  Identities=16%  Similarity=0.154  Sum_probs=103.6

Q ss_pred             cccCcCCCeeEEEEEECCCeEEEEEccCCCCCCC--cc-----------E---E-Eee-CC---cEEE--E---------
Q 039505          165 RVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGH--VP-----------I---V-ECH-VG---ALIT--I---------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~~vAVK~l~~~~~~~~--~~-----------L---v-~c~-~~---~lv~--m---------  212 (342)
                      +.||+|+||.||++...+..||+|.++.......  .+           +   . ++. .+   ++++  +         
T Consensus        12 ~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~   91 (256)
T cd05082          12 QTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL   91 (256)
T ss_pred             eeecccCCCeEEEEEEcCCcEEEEEeCCCchHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHH
Confidence            8999999999999988766999999865432110  01           2   2 222 11   2333  1         


Q ss_pred             -------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc---ccccccCcceee-
Q 039505          213 -------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM---STTIAGTAGFLN-  267 (342)
Q Consensus       213 -------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~---~~~~~Gt~~y~a-  267 (342)
                                         ++.||+|||+   .+++||||||+||+++++  .++.+++.....   .....++..|+| 
T Consensus        92 ~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aP  168 (256)
T cd05082          92 RSRGRSVLGGDCLLKFSLDVCEAMEYLEA---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAP  168 (256)
T ss_pred             HhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeccccchheEEEcCCCcEEecCCccceeccccCCCCccceeecCH
Confidence                               8899999999   999999999999999988  444444322211   112334556766 


Q ss_pred             -------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCC
Q 039505          268 -------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRR  321 (342)
Q Consensus       268 -------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~R  321 (342)
                                               | |+.|+.......   +..  .+........+......+.+++.+||+.+|++|
T Consensus       169 E~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  243 (256)
T cd05082         169 EALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVP--RVEKGYKMDAPDGCPPVVYDVMKQCWHLDAATR  243 (256)
T ss_pred             HHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH---HHH--HHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhC
Confidence                                     3 666665322111   000  000011111223345568899999999999999


Q ss_pred             CCHHHHHHHHHhc
Q 039505          322 PLMNQVVMVREQG  334 (342)
Q Consensus       322 Psm~eV~~~L~~i  334 (342)
                      ||+.++++.|+++
T Consensus       244 pt~~~l~~~l~~~  256 (256)
T cd05082         244 PSFLQLREQLEHI  256 (256)
T ss_pred             cCHHHHHHHHhcC
Confidence            9999999999864

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.72  E-value=1.6e-17  Score=151.17  Aligned_cols=166  Identities=17%  Similarity=0.230  Sum_probs=105.5

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC-----eEEEEEccCCCCCCCc-----c--------------EE-EeeCC---cEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS-----EVAMKMLSPSSSQGHV-----P--------------IV-ECHVG---ALI  210 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~-----~vAVK~l~~~~~~~~~-----~--------------Lv-~c~~~---~lv  210 (342)
                      ++|.  +.||+|+||.||+|.+...     .+|+|.++........     +              +. ++...   +++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (268)
T cd05063           5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII   84 (268)
T ss_pred             HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence            4455  8999999999999998532     6999998754321111     0              22 33322   344


Q ss_pred             E--E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCccc---
Q 039505          211 T--I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHMS---  256 (342)
Q Consensus       211 ~--m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~~---  256 (342)
                      +  +                           ++.||+|||+   .+++||||||+||+++++  .++.+++......   
T Consensus        85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~  161 (268)
T cd05063          85 TEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSD---MNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDP  161 (268)
T ss_pred             EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEEcCCCcEEECCCccceeccccc
Confidence            4  1                           7899999999   899999999999999988  3444433221110   


Q ss_pred             ------cccccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHH
Q 039505          257 ------TTIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISV  303 (342)
Q Consensus       257 ------~~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~  303 (342)
                            .....+..|+|                          | |+.|+.......   +.. .+.. ....+...+..
T Consensus       162 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~---~~~-~i~~-~~~~~~~~~~~  236 (268)
T cd05063         162 EGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHE---VMK-AIND-GFRLPAPMDCP  236 (268)
T ss_pred             ccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHH---HHH-HHhc-CCCCCCCCCCC
Confidence                  00112234655                          5 888876543221   110 1111 11111222345


Q ss_pred             HHHHHHHHHcccccCCCCCCHHHHHHHHHhc
Q 039505          304 GKAVEIAMASVSSKVNRRPLMNQVVMVREQG  334 (342)
Q Consensus       304 ~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i  334 (342)
                      ..+.+++.+||+.+|++||++.+|++.|+++
T Consensus       237 ~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         237 SAVYQLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             HHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            6688999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.72  E-value=6.3e-18  Score=155.08  Aligned_cols=110  Identities=10%  Similarity=0.129  Sum_probs=66.9

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC---------CccccCCCCCc--cccccccCcceee--------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK---------SRISPVEGGTH--MSTTIAGTAGFLN--------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~---------a~~~~~~~~~~--~~~~~~Gt~~y~a--------------  267 (342)
                      +++||+|||+   .+|+||||||+|||++.+         .++.+++....  ......++..|+|              
T Consensus       126 i~~~l~~lH~---~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~  202 (274)
T cd05076         126 LASALSYLED---KNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAA  202 (274)
T ss_pred             HHHHHHHHHc---CCccCCCCCcccEEEeccCcccCccceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHH
Confidence            8999999999   899999999999999864         12333222111  1112345566666              


Q ss_pred             --------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHH
Q 039505          268 --------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVRE  332 (342)
Q Consensus       268 --------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~  332 (342)
                                    +|+.|+........     ....+...  ..+......+.+++.+||+.+|++||+|.+|++.|.
T Consensus       203 Dv~slG~~l~el~~~g~~p~~~~~~~~~-----~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~  274 (274)
T cd05076         203 DKWSFGTTLLEICFDGEVPLKERTPSEK-----ERFYEKKH--RLPEPSCKELATLISQCLTYEPTQRPSFRTILRDLT  274 (274)
T ss_pred             HHHHHHHHHHHHHhCCCCCccccChHHH-----HHHHHhcc--CCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence                          35555443211110     00001000  011112235889999999999999999999998873

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.72  E-value=2.4e-17  Score=149.60  Aligned_cols=161  Identities=15%  Similarity=0.193  Sum_probs=104.5

Q ss_pred             cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCC---cc--------------EE-EeeCC--cEEE--E---------
Q 039505          165 RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGH---VP--------------IV-ECHVG--ALIT--I---------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~---~~--------------Lv-~c~~~--~lv~--m---------  212 (342)
                      +.||+|+||.||+|.+..+ .+|+|.+........   .+              +. ++...  ++++  +         
T Consensus        12 ~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~~   91 (260)
T cd05069          12 VKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSEEPIYIVTEFMGKGSLLDFL   91 (260)
T ss_pred             eeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCcEEEEEcCCCCCHHHHH
Confidence            7899999999999998877 999998865432111   11              22 23222  3333  1         


Q ss_pred             -------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc-------ccccccCcc
Q 039505          213 -------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM-------STTIAGTAG  264 (342)
Q Consensus       213 -------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~-------~~~~~Gt~~  264 (342)
                                         ++.||+|||+   .+++||||||+||+++++  .++.+++.....       .....++..
T Consensus        92 ~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  168 (260)
T cd05069          92 KEGDGKYLKLPQLVDMAAQIADGMAYIER---MNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIK  168 (260)
T ss_pred             hhCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCeEEECCCccceEccCCcccccCCCccchh
Confidence                               8899999999   899999999999999988  344443322110       011234455


Q ss_pred             eee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHccccc
Q 039505          265 FLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSK  317 (342)
Q Consensus       265 y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~  317 (342)
                      |+|                          | |+.|+.......   ... .+. .......+......+.+++.+||+.+
T Consensus       169 y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~-~~~-~~~~~~~~~~~~~~~~~li~~~l~~~  243 (260)
T cd05069         169 WTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE---VLE-QVE-RGYRMPCPQGCPESLHELMKLCWKKD  243 (260)
T ss_pred             hCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHH-HHH-cCCCCCCCcccCHHHHHHHHHHccCC
Confidence            665                          6 788876543221   000 000 01111122334566889999999999


Q ss_pred             CCCCCCHHHHHHHHHh
Q 039505          318 VNRRPLMNQVVMVREQ  333 (342)
Q Consensus       318 P~~RPsm~eV~~~L~~  333 (342)
                      |++||++.+|++.|++
T Consensus       244 p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         244 PDERPTFEYIQSFLED  259 (260)
T ss_pred             cccCcCHHHHHHHHhc
Confidence            9999999999999975

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.72  E-value=1.2e-17  Score=152.94  Aligned_cols=113  Identities=11%  Similarity=0.120  Sum_probs=72.8

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCcc--------ccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHM--------STTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~~--------~~~~~Gt~~y~a---------------  267 (342)
                      +++||+|||+   .+++||||||+||+++++.  ++.+++.....        .....+++.|+|               
T Consensus       128 l~~~l~~lH~---~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di  204 (277)
T cd05062         128 IADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDV  204 (277)
T ss_pred             HHHHHHHHHH---CCcccCCcchheEEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHH
Confidence            7889999999   8999999999999999883  33333322110        111234667777               


Q ss_pred             -----------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHh
Q 039505          268 -----------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQ  333 (342)
Q Consensus       268 -----------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~  333 (342)
                                 | |..|+.......   ... .+..... ...+......+.+++.+||+.+|++|||+.|+++.|++
T Consensus       205 ~slG~~l~el~~~~~~p~~~~~~~~---~~~-~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~  277 (277)
T cd05062         205 WSFGVVLWEIATLAEQPYQGMSNEQ---VLR-FVMEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE  277 (277)
T ss_pred             HHHHHHHHHHHcCCCCCCCCCCHHH---HHH-HHHcCCc-CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence                       4 566665432211   000 0011111 11223344568899999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.72  E-value=2e-17  Score=156.05  Aligned_cols=168  Identities=17%  Similarity=0.162  Sum_probs=104.9

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc-------------------EE-EeeCC---cEEE--
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP-------------------IV-ECHVG---ALIT--  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~---~lv~--  211 (342)
                      ++|+  +.||+|+||.||+++...+  .+|+|.+.........+                   +. ++..+   .+|+  
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   84 (331)
T cd06649           5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH   84 (331)
T ss_pred             ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeec
Confidence            4565  7899999999999998755  89999987543211110                   23 22222   3333  


Q ss_pred             E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc----ccccc
Q 039505          212 I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH----MSTTI  259 (342)
Q Consensus       212 m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~----~~~~~  259 (342)
                      +                          ++.||.|||+.  .+|+||||||+|||++.+  .++.+++....    .....
T Consensus        85 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  162 (331)
T cd06649          85 MDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF  162 (331)
T ss_pred             CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhc--CCEEcCCCChhhEEEcCCCcEEEccCcccccccccccccC
Confidence            1                          88999999982  369999999999999988  34444432221    12235


Q ss_pred             ccCcceee--------------------------cCCCCccccccccccccccccc------------------------
Q 039505          260 AGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKST------------------------  289 (342)
Q Consensus       260 ~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~------------------------  289 (342)
                      .||+.|+|                          ||+.|+..........+.....                        
T Consensus       163 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (331)
T cd06649         163 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSG  242 (331)
T ss_pred             CCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccccc
Confidence            68888888                          8999986432111000000000                        


Q ss_pred             ------------------ccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHH
Q 039505          290 ------------------VDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMV  330 (342)
Q Consensus       290 ------------------~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~  330 (342)
                                        ...............++.+++.+||+.+|++|||+.|+++.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h  301 (331)
T cd06649         243 HGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH  301 (331)
T ss_pred             cccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence                              00000000011234568899999999999999999999854

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.72  E-value=9.8e-18  Score=158.06  Aligned_cols=155  Identities=19%  Similarity=0.223  Sum_probs=100.7

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC-------cc--------------EE-EeeCC---cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH-------VP--------------IV-ECHVG---ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~-------~~--------------Lv-~c~~~---~lv~--m---  212 (342)
                      +.||+|+||.||+|++..+  .||||+++.......       .+              ++ .+..+   ++++  +   
T Consensus        24 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~  103 (329)
T PTZ00263         24 ETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVGG  103 (329)
T ss_pred             EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcCCCCC
Confidence            8999999999999998755  899999865321110       01              22 22222   3332  1   


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc---cccccccCcc
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH---MSTTIAGTAG  264 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~---~~~~~~Gt~~  264 (342)
                                             +++||+|||+   .+|+||||||+|||++.+  .++.+++....   ......||+.
T Consensus       104 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~  180 (329)
T PTZ00263        104 ELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHS---KDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFTLCGTPE  180 (329)
T ss_pred             hHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCcceecCChh
Confidence                                   7889999999   999999999999999988  44554443321   1223578999


Q ss_pred             eee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccC
Q 039505          265 FLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKV  318 (342)
Q Consensus       265 y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P  318 (342)
                      |+|                          ||+.||.......   +. ..+....+  ..+......+.+++.+||+.||
T Consensus       181 y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~---~~-~~i~~~~~--~~p~~~~~~~~~li~~~L~~dP  254 (329)
T PTZ00263        181 YLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFR---IY-EKILAGRL--KFPNWFDGRARDLVKGLLQTDH  254 (329)
T ss_pred             hcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHH---HH-HHHhcCCc--CCCCCCCHHHHHHHHHHhhcCH
Confidence            988                          8888876532211   00 11111111  1111223457889999999999


Q ss_pred             CCCCC-----HHHHH
Q 039505          319 NRRPL-----MNQVV  328 (342)
Q Consensus       319 ~~RPs-----m~eV~  328 (342)
                      ++||+     +.+++
T Consensus       255 ~~R~~~~~~~~~~ll  269 (329)
T PTZ00263        255 TKRLGTLKGGVADVK  269 (329)
T ss_pred             HHcCCCCCCCHHHHh
Confidence            99996     56665

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.72  E-value=2.9e-17  Score=149.14  Aligned_cols=161  Identities=17%  Similarity=0.189  Sum_probs=102.0

Q ss_pred             ccCcCCCeeEEEEEEC--C-C-eEEEEEccCCCCCCCcc-------------------EE-EeeCC--cEEE-E------
Q 039505          166 VPYKGGFITVYHGQLV--K-S-EVAMKMLSPSSSQGHVP-------------------IV-ECHVG--ALIT-I------  212 (342)
Q Consensus       166 ~lG~G~fG~Vykg~~~--~-~-~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~--~lv~-m------  212 (342)
                      .||+|+||.||+|.+.  + + .||+|++.........+                   ++ +|...  .+++ +      
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~lv~e~~~~~~L   81 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAEALMLVMEMASGGPL   81 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCCCeEEEEEeCCCCCH
Confidence            4899999999999875  2 2 69999997654321111                   22 44333  3333 1      


Q ss_pred             ----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc---------cccc
Q 039505          213 ----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM---------STTI  259 (342)
Q Consensus       213 ----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~---------~~~~  259 (342)
                                            +++||+|||+   .+++||||||+|||++.+  .++.+++.....         ....
T Consensus        82 ~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  158 (257)
T cd05115          82 NKFLSGKKDEITVSNVVELMHQVSMGMKYLEG---KNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAG  158 (257)
T ss_pred             HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh---cCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCC
Confidence                                  8899999999   899999999999999987  344443322110         0111


Q ss_pred             ccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHH
Q 039505          260 AGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMA  312 (342)
Q Consensus       260 ~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~  312 (342)
                      .++..|+|                          + |+.|+.......   +.  ..+........+..+..++.+++.+
T Consensus       159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~l~~li~~  233 (257)
T cd05115         159 KWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE---VM--SFIEQGKRLDCPAECPPEMYALMKD  233 (257)
T ss_pred             CCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH---HH--HHHHCCCCCCCCCCCCHHHHHHHHH
Confidence            22345655                          3 777776543221   00  0011111112233445668899999


Q ss_pred             cccccCCCCCCHHHHHHHHHhc
Q 039505          313 SVSSKVNRRPLMNQVVMVREQG  334 (342)
Q Consensus       313 Cl~~~P~~RPsm~eV~~~L~~i  334 (342)
                      ||+.+|++||++.+|.+.|+.+
T Consensus       234 c~~~~~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         234 CWIYKWEDRPNFAKVEERMRTY  255 (257)
T ss_pred             HcCCChhhCcCHHHHHHHHhhh
Confidence            9999999999999999999864

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.72  E-value=3e-17  Score=149.37  Aligned_cols=114  Identities=14%  Similarity=0.155  Sum_probs=72.7

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc--------ccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM--------STTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~--------~~~~~Gt~~y~a---------------  267 (342)
                      ++.||+|||+   .+++||||||+||+++++  .++.+++.....        .....++..|+|               
T Consensus       122 i~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv  198 (273)
T cd05035         122 IALGMEYLSN---RNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDV  198 (273)
T ss_pred             HHHHHHHHHh---CCeeccccchheEEECCCCeEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccch
Confidence            7889999999   899999999999999988  344443322110        001123344554               


Q ss_pred             -----------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhc
Q 039505          268 -----------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQG  334 (342)
Q Consensus       268 -----------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i  334 (342)
                                 + |..|+.......   +.+ .+.+.. ....+.....++.+++.+||+.+|++||++.|+++.|+++
T Consensus       199 ~SlG~il~el~~~g~~p~~~~~~~~---~~~-~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         199 WAFGVTMWEIATRGQTPYPGVENHE---IYD-YLRHGN-RLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCCHHH---HHH-HHHcCC-CCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence                       4 666665432211   111 011110 1112233456789999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.72  E-value=1.5e-17  Score=156.88  Aligned_cols=155  Identities=17%  Similarity=0.207  Sum_probs=98.8

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc----------------------EE-EeeCC---cEEE--E--
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP----------------------IV-ECHVG---ALIT--I--  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~----------------------Lv-~c~~~---~lv~--m--  212 (342)
                      ++||+|+||.||+|+...+  .||+|+++.........                      +. ++...   ++|+  +  
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            4799999999999998765  89999987642111100                      22 22222   3333  1  


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------cccccc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIA  260 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~  260 (342)
                                              ++.||+|||+   .+|+||||||+|||++.+  .++.+++....      ......
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~  157 (329)
T cd05618          81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFC  157 (329)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCcccccc
Confidence                                    8899999999   999999999999999988  44555443211      123357


Q ss_pred             cCcceee--------------------------cCCCCcccccccc--cc---cccccccccccCCCCCChHHHHHHHHH
Q 039505          261 GTAGFLN--------------------------TKNPVISKSIENG--NS---HLRDKSTVDLSFKGEFDIISVGKAVEI  309 (342)
Q Consensus       261 Gt~~y~a--------------------------tG~~P~~~~~~~~--~~---~l~~~~~~d~~l~~~~~~~~~~~l~~l  309 (342)
                      ||+.|+|                          ||+.||.......  ..   ......+.....  ..+......+.++
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~--~~p~~~~~~~~~l  235 (329)
T cd05618         158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI--RIPRSLSVKAASV  235 (329)
T ss_pred             CCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC--CCCCCCCHHHHHH
Confidence            8999988                          8888886321110  00   000001111111  1223334567899


Q ss_pred             HHHcccccCCCCCCH
Q 039505          310 AMASVSSKVNRRPLM  324 (342)
Q Consensus       310 ~~~Cl~~~P~~RPsm  324 (342)
                      +.+||+.+|++||+.
T Consensus       236 l~~~L~~dP~~R~~~  250 (329)
T cd05618         236 LKSFLNKDPKERLGC  250 (329)
T ss_pred             HHHHhcCCHHHcCCC
Confidence            999999999999983

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.72  E-value=1.4e-17  Score=153.64  Aligned_cols=117  Identities=10%  Similarity=0.106  Sum_probs=76.4

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCcc--------ccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHM--------STTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~~--------~~~~~Gt~~y~a---------------  267 (342)
                      ++.||+|||+   .+++||||||+|||++++.  ++.+++.....        .....++..|+|               
T Consensus       129 l~~aL~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi  205 (288)
T cd05093         129 IAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDV  205 (288)
T ss_pred             HHHHHHHHHh---CCeeecccCcceEEEccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhH
Confidence            7889999999   9999999999999999883  34433322110        112234566777               


Q ss_pred             -----------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhcc
Q 039505          268 -----------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       268 -----------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                                 | |+.|+.......   +.. .+..... ...+......+.+++.+||+.+|.+|||+.+|...|+.+.
T Consensus       206 wslG~il~~l~t~g~~p~~~~~~~~---~~~-~i~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~  280 (288)
T cd05093         206 WSLGVVLWEIFTYGKQPWYQLSNNE---VIE-CITQGRV-LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLA  280 (288)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCCHHH---HHH-HHHcCCc-CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence                       5 777775443211   000 0000000 0111223456899999999999999999999999999887


Q ss_pred             CC
Q 039505          336 GS  337 (342)
Q Consensus       336 ~~  337 (342)
                      ..
T Consensus       281 ~~  282 (288)
T cd05093         281 KA  282 (288)
T ss_pred             Hh
Confidence            64

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.71  E-value=1.6e-17  Score=153.40  Aligned_cols=117  Identities=10%  Similarity=0.117  Sum_probs=78.6

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc--------cccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH--------MSTTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~--------~~~~~~Gt~~y~a---------------  267 (342)
                      ++.||+|||+   .+|+||||||+|||++++  .++.+++....        ......++..|+|               
T Consensus       132 i~~al~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di  208 (291)
T cd05094         132 IASGMVYLAS---QHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDV  208 (291)
T ss_pred             HHHHHHHHHh---CCeeecccCcceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhH
Confidence            7889999999   999999999999999988  34444332211        1122345667776               


Q ss_pred             -----------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhcc
Q 039505          268 -----------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       268 -----------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                                 | |+.|+.......   +++ .+..... ...+...+..+.+++.+||+.+|++||++.+|+++|+++.
T Consensus       209 ~slG~il~el~t~g~~p~~~~~~~~---~~~-~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~  283 (291)
T cd05094         209 WSFGVILWEIFTYGKQPWFQLSNTE---VIE-CITQGRV-LERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALG  283 (291)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCCHHH---HHH-HHhCCCC-CCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence                       6 888876543221   110 0111111 1112234556889999999999999999999999999986


Q ss_pred             CC
Q 039505          336 GS  337 (342)
Q Consensus       336 ~~  337 (342)
                      +.
T Consensus       284 ~~  285 (291)
T cd05094         284 KA  285 (291)
T ss_pred             hh
Confidence            54

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.71  E-value=1.3e-17  Score=156.32  Aligned_cols=154  Identities=19%  Similarity=0.239  Sum_probs=99.9

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCC---CCCc----c---------------EE-EeeCC---cEEE--E--
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSS---QGHV----P---------------IV-ECHVG---ALIT--I--  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~---~~~~----~---------------Lv-~c~~~---~lv~--m--  212 (342)
                      +.||+|+||+||+|+...+  .||||+++....   ....    +               +. ++...   ++++  +  
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            4699999999999998765  899999875421   0000    0               22 22222   2333  1  


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------cccccc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIA  260 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~  260 (342)
                                              +++||+|||+   .+|+||||||+|||++.+  .++.+++....      ......
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  157 (316)
T cd05619          81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHS---KGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFC  157 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeec
Confidence                                    8899999999   999999999999999988  34444432211      122356


Q ss_pred             cCcceee--------------------------cCCCCcccccccccccccc-cccccccCCCCCChHHHHHHHHHHHHc
Q 039505          261 GTAGFLN--------------------------TKNPVISKSIENGNSHLRD-KSTVDLSFKGEFDIISVGKAVEIAMAS  313 (342)
Q Consensus       261 Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~l~~~~~~~~~~~l~~l~~~C  313 (342)
                      ||+.|+|                          ||+.||.......   +.. .....+...    ......+.+++.+|
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~---~~~~i~~~~~~~~----~~~~~~~~~li~~~  230 (316)
T cd05619         158 GTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE---LFQSIRMDNPCYP----RWLTREAKDILVKL  230 (316)
T ss_pred             CCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHH---HHHHHHhCCCCCC----ccCCHHHHHHHHHH
Confidence            8999998                          8888886543211   111 111112221    12234577889999


Q ss_pred             ccccCCCCCCHH-HHH
Q 039505          314 VSSKVNRRPLMN-QVV  328 (342)
Q Consensus       314 l~~~P~~RPsm~-eV~  328 (342)
                      |+.+|++||++. ++.
T Consensus       231 l~~~P~~R~~~~~~l~  246 (316)
T cd05619         231 FVREPERRLGVKGDIR  246 (316)
T ss_pred             hccCHhhcCCChHHHH
Confidence            999999999997 554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.71  E-value=2.4e-17  Score=151.35  Aligned_cols=163  Identities=19%  Similarity=0.197  Sum_probs=102.7

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC-c----c--------------EE-EeeCC---cEEE--E-----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH-V----P--------------IV-ECHVG---ALIT--I-----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~-~----~--------------Lv-~c~~~---~lv~--m-----  212 (342)
                      ++||+|+||.||+|....+  .||+|.+........ .    +              ++ +|...   .+++  +     
T Consensus         7 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l   86 (279)
T cd06619           7 EILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGGSL   86 (279)
T ss_pred             eeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCCCCh
Confidence            7899999999999987654  999999865422111 0    1              22 23222   3333  1     


Q ss_pred             -----------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc----cccccccCcceee--
Q 039505          213 -----------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH----MSTTIAGTAGFLN--  267 (342)
Q Consensus       213 -----------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~----~~~~~~Gt~~y~a--  267 (342)
                                       ++.||+|||+   .+|+|+||||+|||++.+  .++.+++....    ......||..|+|  
T Consensus        87 ~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE  163 (279)
T cd06619          87 DVYRKIPEHVLGRIAVAVVKGLTYLWS---LKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVGTNAYMAPE  163 (279)
T ss_pred             HHhhcCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCCCChhhcCce
Confidence                             8999999999   999999999999999988  44444332221    1223567777877  


Q ss_pred             ------------------------cCCCCcccccccccccc-cc--cccccccCCCCCChHHHHHHHHHHHHcccccCCC
Q 039505          268 ------------------------TKNPVISKSIENGNSHL-RD--KSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNR  320 (342)
Q Consensus       268 ------------------------tG~~P~~~~~~~~~~~l-~~--~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~  320 (342)
                                              ||+.|+........... ..  ..+.++............++.+++.+|++.+|++
T Consensus       164 ~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~  243 (279)
T cd06619         164 RISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKE  243 (279)
T ss_pred             eecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhh
Confidence                                    88888865432210000 00  0111111101011112345789999999999999


Q ss_pred             CCCHHHHHHH
Q 039505          321 RPLMNQVVMV  330 (342)
Q Consensus       321 RPsm~eV~~~  330 (342)
                      ||++.|+++.
T Consensus       244 Rp~~~eil~~  253 (279)
T cd06619         244 RPAPENLMDH  253 (279)
T ss_pred             CCCHHHHhcC
Confidence            9999998753

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.71  E-value=1.2e-17  Score=157.00  Aligned_cols=156  Identities=18%  Similarity=0.181  Sum_probs=99.9

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-------c--------------EE-EeeCC---cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-------P--------------IV-ECHVG---ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-------~--------------Lv-~c~~~---~lv~--m---  212 (342)
                      ++||+|+||.||++.....  .||+|+++........       +              +. .+...   ++|+  +   
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            4699999999999998654  9999998754211110       1              22 22222   3333  1   


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------ccccccc
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIAG  261 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~G  261 (342)
                                             ++.||+|||+   .+|+||||||+|||++.+  .++.+++....      ......|
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g  157 (323)
T cd05595          81 ELFFHLSRERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG  157 (323)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccC
Confidence                                   8999999999   999999999999999988  34444332111      1123568


Q ss_pred             Ccceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHccc
Q 039505          262 TAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVS  315 (342)
Q Consensus       262 t~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~  315 (342)
                      |+.|+|                          ||+.|+.......   +. ..+.....  ..+......+.+++.+||+
T Consensus       158 t~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~---~~-~~~~~~~~--~~p~~~~~~~~~li~~~L~  231 (323)
T cd05595         158 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER---LF-ELILMEEI--RFPRTLSPEAKSLLAGLLK  231 (323)
T ss_pred             CcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHH---HH-HHHhcCCC--CCCCCCCHHHHHHHHHHcc
Confidence            999998                          7888876443221   00 00111111  1122234457889999999


Q ss_pred             ccCCCCC-----CHHHHHH
Q 039505          316 SKVNRRP-----LMNQVVM  329 (342)
Q Consensus       316 ~~P~~RP-----sm~eV~~  329 (342)
                      .+|++||     ++.++++
T Consensus       232 ~dP~~R~~~~~~~~~~~l~  250 (323)
T cd05595         232 KDPKQRLGGGPSDAKEVME  250 (323)
T ss_pred             CCHHHhCCCCCCCHHHHHc
Confidence            9999998     7888764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.71  E-value=4e-17  Score=149.05  Aligned_cols=114  Identities=17%  Similarity=0.214  Sum_probs=72.9

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc-----ccccccCcceee------------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM-----STTIAGTAGFLN------------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~-----~~~~~Gt~~y~a------------------  267 (342)
                      ++.||+|||+   .+++||||||+|||++++  .++.+++.....     ......+..|+|                  
T Consensus       121 i~~al~~lH~---~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~sl  197 (270)
T cd05047         121 VARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSY  197 (270)
T ss_pred             HHHHHHHHHH---CCEeecccccceEEEcCCCeEEECCCCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHH
Confidence            6789999999   999999999999999988  344443322110     011122345665                  


Q ss_pred             --------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhc
Q 039505          268 --------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQG  334 (342)
Q Consensus       268 --------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i  334 (342)
                              | |+.|+.......   +.  +.+......+.+......+.+++.+||+.+|.+|||+.+++..|+++
T Consensus       198 G~il~el~~~g~~pf~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~  268 (270)
T cd05047         198 GVLLWEIVSLGGTPYCGMTCAE---LY--EKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM  268 (270)
T ss_pred             HHHHHHHHcCCCCCccccCHHH---HH--HHHhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHh
Confidence                    4 777775432111   00  01111111112223345688999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.71  E-value=2.5e-17  Score=153.26  Aligned_cols=118  Identities=17%  Similarity=0.201  Sum_probs=73.6

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCcc-----ccccccCcceee------------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHM-----STTIAGTAGFLN------------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~~-----~~~~~Gt~~y~a------------------  267 (342)
                      +++||+|||+   .+|+||||||+|||++++.  ++.+++.....     .....++..|+|                  
T Consensus       133 i~~al~~LH~---~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl  209 (303)
T cd05088         133 VARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSY  209 (303)
T ss_pred             HHHHHHHHHh---CCccccccchheEEecCCCcEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhh
Confidence            7789999999   9999999999999999873  34443322110     011122344555                  


Q ss_pred             --------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccCCC
Q 039505          268 --------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNGSR  338 (342)
Q Consensus       268 --------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~~~  338 (342)
                              | |..|+.......   +.  +.+........+......+.+++.+||+.+|++||++.++++.|+++...+
T Consensus       210 G~il~ellt~g~~p~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~  284 (303)
T cd05088         210 GVLLWEIVSLGGTPYCGMTCAE---LY--EKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER  284 (303)
T ss_pred             hhHHHHHHhcCCCCcccCChHH---HH--HHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence                    4 777765432111   00  001011111112223456889999999999999999999999988865443

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.71  E-value=9.2e-18  Score=157.44  Aligned_cols=156  Identities=20%  Similarity=0.236  Sum_probs=101.0

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-------c---------------EE-EeeCC---cEEE--E--
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-------P---------------IV-ECHVG---ALIT--I--  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-------~---------------Lv-~c~~~---~lv~--m--  212 (342)
                      ++||+|+||+||+|.+..+  .||||+++........       +               +. ++...   ++++  +  
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            4799999999999998765  8999998753210000       0               22 22222   2332  1  


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------cccccc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIA  260 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~  260 (342)
                                              ++.||.|||+   .+|+||||||+|||++++  .++.+++....      .....+
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  157 (318)
T cd05570          81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHE---RGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFC  157 (318)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh---CCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCccccee
Confidence                                    8899999999   999999999999999988  44444432211      122356


Q ss_pred             cCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcc
Q 039505          261 GTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASV  314 (342)
Q Consensus       261 Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl  314 (342)
                      ||+.|+|                          ||+.||.......   +.. .+.....  ..+......+.+++.+||
T Consensus       158 g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~---~~~-~i~~~~~--~~~~~~~~~~~~li~~~l  231 (318)
T cd05570         158 GTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDE---LFQ-SILEDEV--RYPRWLSKEAKSILKSFL  231 (318)
T ss_pred             cCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHH---HHH-HHHcCCC--CCCCcCCHHHHHHHHHHc
Confidence            8899998                          7888886543221   110 0111111  112223455889999999


Q ss_pred             cccCCCCCCH-----HHHHH
Q 039505          315 SSKVNRRPLM-----NQVVM  329 (342)
Q Consensus       315 ~~~P~~RPsm-----~eV~~  329 (342)
                      +.+|++||++     .+++.
T Consensus       232 ~~dP~~R~s~~~~~~~~ll~  251 (318)
T cd05570         232 TKNPEKRLGCLPTGEQDIKG  251 (318)
T ss_pred             cCCHHHcCCCCCCCHHHHhc
Confidence            9999999998     77754

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.71  E-value=3.1e-17  Score=154.22  Aligned_cols=157  Identities=17%  Similarity=0.178  Sum_probs=100.0

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-------c--------------EE-EeeCC---cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-------P--------------IV-ECHVG---ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-------~--------------Lv-~c~~~---~lv~--m---  212 (342)
                      ++||+|+||.||++....+  .||+|+++........       +              +. ++...   ++|+  +   
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            4699999999999998654  9999998754211111       0              22 22222   3333  1   


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------ccccccc
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIAG  261 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~G  261 (342)
                                             ++.||+|||+.  .+|+||||||+|||++++  .++.+++....      ......|
T Consensus        81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~--~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g  158 (325)
T cd05594          81 ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCG  158 (325)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccC
Confidence                                   89999999962  689999999999999988  44444443211      1123568


Q ss_pred             Ccceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHccc
Q 039505          262 TAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVS  315 (342)
Q Consensus       262 t~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~  315 (342)
                      |+.|+|                          ||+.||...........+  ......+    +......+.+++.+|++
T Consensus       159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i--~~~~~~~----p~~~~~~~~~li~~~L~  232 (325)
T cd05594         159 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI--LMEEIRF----PRTLSPEAKSLLSGLLK  232 (325)
T ss_pred             CcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHH--hcCCCCC----CCCCCHHHHHHHHHHhh
Confidence            999998                          777777543321100000  0001111    12233457889999999


Q ss_pred             ccCCCCC-----CHHHHHH
Q 039505          316 SKVNRRP-----LMNQVVM  329 (342)
Q Consensus       316 ~~P~~RP-----sm~eV~~  329 (342)
                      .+|++|+     ++.++++
T Consensus       233 ~dP~~R~~~~~~~~~~il~  251 (325)
T cd05594         233 KDPKQRLGGGPDDAKEIMQ  251 (325)
T ss_pred             cCHHHhCCCCCCCHHHHhc
Confidence            9999996     8888874

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.71  E-value=3.8e-17  Score=150.14  Aligned_cols=168  Identities=17%  Similarity=0.155  Sum_probs=98.9

Q ss_pred             cccCcCCCeeEEEEEEC-----CC-eEEEEEccCCCCCCCcc---------------EE----EeeC-C----cEEE--E
Q 039505          165 RVPYKGGFITVYHGQLV-----KS-EVAMKMLSPSSSQGHVP---------------IV----ECHV-G----ALIT--I  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~-----~~-~vAVK~l~~~~~~~~~~---------------Lv----~c~~-~----~lv~--m  212 (342)
                      +.||+|+||.||+|...     .+ .||||++........+.               ++    +|.. +    ++++  +
T Consensus        10 ~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~   89 (284)
T cd05081          10 QQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYL   89 (284)
T ss_pred             eeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEEEec
Confidence            88999999999999853     23 89999987553221111               22    3321 1    3443  2


Q ss_pred             ---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCccc-------
Q 039505          213 ---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHMS-------  256 (342)
Q Consensus       213 ---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~~~-------  256 (342)
                                                 +++||+|||+   .+|+||||||+||+++++.  ++.+++......       
T Consensus        90 ~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~  166 (284)
T cd05081          90 PYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGS---KRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYK  166 (284)
T ss_pred             CCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHhhEEECCCCeEEECCCcccccccCCCccee
Confidence                                       8899999999   9999999999999999873  333332221100       


Q ss_pred             --cccccCcceee--------------------------cCCCCcccccccccccccc-----------cccccccCCCC
Q 039505          257 --TTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRD-----------KSTVDLSFKGE  297 (342)
Q Consensus       257 --~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~-----------~~~~d~~l~~~  297 (342)
                        ....++..|+|                          ||..|...........+..           .+.+.......
T Consensus       167 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (284)
T cd05081         167 VREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLP  246 (284)
T ss_pred             ecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcCC
Confidence              01112334655                          4433322111000000000           00010001111


Q ss_pred             CChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhcc
Q 039505          298 FDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       298 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                      .+......+.+++.+||+.+|++|||+.||++.|+.++
T Consensus       247 ~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~~  284 (284)
T cd05081         247 APPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAIR  284 (284)
T ss_pred             CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhcC
Confidence            12233456899999999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.71  E-value=2.3e-17  Score=156.45  Aligned_cols=162  Identities=19%  Similarity=0.217  Sum_probs=104.0

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc-----------------------EEEee-CC--cEEE--E--
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP-----------------------IVECH-VG--ALIT--I--  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~-----------------------Lv~c~-~~--~lv~--m--  212 (342)
                      +.||+|.||.||||+...+  .||+|++.....+..-.                       |+.-. .+  ++||  |  
T Consensus       123 ~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMdh  202 (560)
T KOG0600|consen  123 EKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMDH  202 (560)
T ss_pred             HHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEecccc
Confidence            8999999999999997655  99999998765322111                       22111 22  7777  5  


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCC-------cccccc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGT-------HMSTTI  259 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~-------~~~~~~  259 (342)
                                              +++||+|+|+   .+|+|||||.+|||||.+  .|+.+++...       ..-+.-
T Consensus       203 DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~---~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~r  279 (560)
T KOG0600|consen  203 DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHS---RGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPYTSR  279 (560)
T ss_pred             hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhh---cCeeeccccccceEEcCCCCEEeccccceeeccCCCCcccccc
Confidence                                    8999999999   999999999999999999  3444433322       112334


Q ss_pred             ccCcceee---------------------------cCCCCcccccccc-cccccc------c-----------ccccccC
Q 039505          260 AGTAGFLN---------------------------TKNPVISKSIENG-NSHLRD------K-----------STVDLSF  294 (342)
Q Consensus       260 ~Gt~~y~a---------------------------tG~~P~~~~~~~~-~~~l~~------~-----------~~~d~~l  294 (342)
                      +-|.+|.|                           +|++.+.+..+.. ++.+..      .           ..+.+.-
T Consensus       280 VvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~  359 (560)
T KOG0600|consen  280 VVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQ  359 (560)
T ss_pred             eEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCC
Confidence            56788887                           7777776654322 111111      0           0111100


Q ss_pred             CCCC-----ChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          295 KGEF-----DIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       295 ~~~~-----~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      .-..     -.......++|+-..|..||.+|.|+.++++
T Consensus       360 ~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~  399 (560)
T KOG0600|consen  360 PYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ  399 (560)
T ss_pred             cccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence            0000     0012334677888888999999999998874

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.71  E-value=2.5e-17  Score=149.14  Aligned_cols=159  Identities=17%  Similarity=0.219  Sum_probs=101.2

Q ss_pred             cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCC---cc-----------EE----EeeCC---cEEE--E--------
Q 039505          165 RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGH---VP-----------IV----ECHVG---ALIT--I--------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~---~~-----------Lv----~c~~~---~lv~--m--------  212 (342)
                      +.||+|+||.||+|.+..+ .+|+|.+........   .+           ++    ++...   ++++  +        
T Consensus        10 ~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   89 (256)
T cd05059          10 KELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNY   89 (256)
T ss_pred             hhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCCCHHHH
Confidence            8899999999999998776 899999865432111   11           22    33332   2332  1        


Q ss_pred             -------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCccc-------cccccCcc
Q 039505          213 -------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHMS-------TTIAGTAG  264 (342)
Q Consensus       213 -------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~~-------~~~~Gt~~  264 (342)
                                         ++.||+|||+   .+++||||||+||+++++  .++.+++......       ....++..
T Consensus        90 l~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~  166 (256)
T cd05059          90 LRERKGKLGTEWLLDMCSDVCEAMEYLES---NGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVK  166 (256)
T ss_pred             HHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHhhEEECCCCcEEECCcccceecccccccccCCCCCCcc
Confidence                               8899999999   899999999999999988  3444433221110       01112334


Q ss_pred             eee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHccccc
Q 039505          265 FLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSK  317 (342)
Q Consensus       265 y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~  317 (342)
                      |+|                          | |+.|+.......   ...  .+........+......+.+++.+||..+
T Consensus       167 y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~li~~cl~~~  241 (256)
T cd05059         167 WAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE---VVE--SVSAGYRLYRPKLAPTEVYTIMYSCWHEK  241 (256)
T ss_pred             ccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH---HHH--HHHcCCcCCCCCCCCHHHHHHHHHHhcCC
Confidence            665                          5 677776433221   110  00111111122234556899999999999


Q ss_pred             CCCCCCHHHHHHHH
Q 039505          318 VNRRPLMNQVVMVR  331 (342)
Q Consensus       318 P~~RPsm~eV~~~L  331 (342)
                      |++||||.|+++.|
T Consensus       242 p~~Rpt~~~~l~~l  255 (256)
T cd05059         242 PEDRPAFKKLLSQL  255 (256)
T ss_pred             hhhCcCHHHHHHHh
Confidence            99999999999886

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.71  E-value=3e-17  Score=151.47  Aligned_cols=116  Identities=14%  Similarity=0.185  Sum_probs=76.9

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc--------ccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM--------STTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~--------~~~~~Gt~~y~a---------------  267 (342)
                      ++.||+|||+   .+++||||||+|||++++  .++.+++.....        .....++..|+|               
T Consensus       136 i~~~l~~LH~---~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di  212 (290)
T cd05045         136 ISRGMQYLAE---MKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDV  212 (290)
T ss_pred             HHHHHHHHHH---CCeehhhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHH
Confidence            7899999999   999999999999999988  444443322110        111234556665               


Q ss_pred             -----------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhcc
Q 039505          268 -----------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       268 -----------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                                 | |+.|+.......   +++  .+........+......+.+++.+||+.+|++||++.++++.|+++-
T Consensus       213 ~slG~~l~el~t~g~~p~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~  287 (290)
T cd05045         213 WSFGVLLWEIVTLGGNPYPGIAPER---LFN--LLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMM  287 (290)
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCHHH---HHH--HHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence                       5 887876443221   111  11111111222334456889999999999999999999999999875


Q ss_pred             C
Q 039505          336 G  336 (342)
Q Consensus       336 ~  336 (342)
                      .
T Consensus       288 ~  288 (290)
T cd05045         288 V  288 (290)
T ss_pred             h
Confidence            4

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.71  E-value=2.7e-17  Score=152.44  Aligned_cols=117  Identities=15%  Similarity=0.176  Sum_probs=74.2

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCccc-----cccccCcceee------------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHMS-----TTIAGTAGFLN------------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~~-----~~~~Gt~~y~a------------------  267 (342)
                      ++.||+|||+   .+|+||||||+|||++++  .++.+++......     .....+..|+|                  
T Consensus       128 i~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSl  204 (297)
T cd05089         128 VATGMQYLSE---KQFIHRDLAARNVLVGENLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSF  204 (297)
T ss_pred             HHHHHHHHHH---CCcccCcCCcceEEECCCCeEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHH
Confidence            6789999999   999999999999999988  4444443221110     01112334555                  


Q ss_pred             --------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccCC
Q 039505          268 --------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNGS  337 (342)
Q Consensus       268 --------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~~  337 (342)
                              | |+.|+.......   +..  ..........+......+.+++.+||+.+|.+||++.++++.|+.+...
T Consensus       205 G~il~el~t~g~~pf~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~  278 (297)
T cd05089         205 GVLLWEIVSLGGTPYCGMTCAE---LYE--KLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEA  278 (297)
T ss_pred             HHHHHHHHcCCCCCCCCCCHHH---HHH--HHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence                    4 777775432211   000  0111111112223445688999999999999999999999998877543

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.71  E-value=2.3e-17  Score=158.64  Aligned_cols=76  Identities=24%  Similarity=0.257  Sum_probs=57.0

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-------c--------------EE-EeeCC---cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-------P--------------IV-ECHVG---ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-------~--------------Lv-~c~~~---~lv~--m---  212 (342)
                      +.||+|+||+||+|+...+  .||||++.........       +              +. ++.++   ++|+  +   
T Consensus         7 ~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~~gg   86 (381)
T cd05626           7 KTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGG   86 (381)
T ss_pred             EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecCCCC
Confidence            7899999999999998765  9999999654211110       1              22 33322   3333  1   


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK  243 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~  243 (342)
                                             ++.||+|||+   .+|+||||||+|||++.+
T Consensus        87 ~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~---~givHrDlKp~Nili~~~  137 (381)
T cd05626          87 DMMSLLIRMEVFPEVLARFYIAELTLAIESVHK---MGFIHRDIKPDNILIDLD  137 (381)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCcHHHEEECCC
Confidence                                   7889999999   999999999999999987

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.71  E-value=2.8e-17  Score=151.79  Aligned_cols=115  Identities=10%  Similarity=0.159  Sum_probs=72.2

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc--------cccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH--------MSTTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~--------~~~~~~Gt~~y~a---------------  267 (342)
                      +++||+|||+   .+|+||||||+||+++++  .++.+++....        ......+++.|+|               
T Consensus       139 i~~al~~LH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv  215 (296)
T cd05051         139 IASGMRYLES---LNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDV  215 (296)
T ss_pred             HHHHHHHHHH---cCccccccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchh
Confidence            7889999999   999999999999999988  34444332211        1122345667887               


Q ss_pred             -----------c--CCCCcccccccccccccc--cccc---cccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          268 -----------T--KNPVISKSIENGNSHLRD--KSTV---DLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       268 -----------t--G~~P~~~~~~~~~~~l~~--~~~~---d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                                 |  |..|+.......   ++.  ....   +.......+...+.++.+++.+||+.+|++|||+.||++
T Consensus       216 ~slG~~l~el~~~~~~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~  292 (296)
T cd05051         216 WAFGVTLWEILTLCREQPYEHLTDQQ---VIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL  292 (296)
T ss_pred             hhhHHHHHHHHhcCCCCCCCCcChHH---HHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence                       2  444544322111   000  0000   001101112233467899999999999999999999999


Q ss_pred             HHHh
Q 039505          330 VREQ  333 (342)
Q Consensus       330 ~L~~  333 (342)
                      .|++
T Consensus       293 ~L~~  296 (296)
T cd05051         293 FLQR  296 (296)
T ss_pred             HhcC
Confidence            8863

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.71  E-value=2.8e-17  Score=152.91  Aligned_cols=165  Identities=17%  Similarity=0.218  Sum_probs=104.0

Q ss_pred             cccCcCCCeeEEEEEECCC------eEEEEEccCCCCCCCc-----c--------------EE-EeeCC--cEEE--E--
Q 039505          165 RVPYKGGFITVYHGQLVKS------EVAMKMLSPSSSQGHV-----P--------------IV-ECHVG--ALIT--I--  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~------~vAVK~l~~~~~~~~~-----~--------------Lv-~c~~~--~lv~--m--  212 (342)
                      +.||+|+||.||+|.+..+      .||+|.+.........     +              ++ +|...  .+++  +  
T Consensus        13 ~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~v~e~~~~   92 (303)
T cd05110          13 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPH   92 (303)
T ss_pred             cccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCCceeeehhcCC
Confidence            7899999999999987433      4799988754322111     1              33 44332  2222  1  


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc--------cc
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM--------ST  257 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~--------~~  257 (342)
                                               +++||+|||+   .+|+||||||+|||++++  .++.+++.....        ..
T Consensus        93 g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~  169 (303)
T cd05110          93 GCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNAD  169 (303)
T ss_pred             CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhh---cCeeccccccceeeecCCCceEEccccccccccCcccccccC
Confidence                                     8999999999   999999999999999887  444443322111        11


Q ss_pred             ccccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHH
Q 039505          258 TIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIA  310 (342)
Q Consensus       258 ~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~  310 (342)
                      ...++..|+|                          | |+.|+..........++.     .......+..+...+.+++
T Consensus       170 ~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~li  244 (303)
T cd05110         170 GGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLE-----KGERLPQPPICTIDVYMVM  244 (303)
T ss_pred             CCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-----CCCCCCCCCCCCHHHHHHH
Confidence            1234556776                          3 777775432111001111     0000111122345688999


Q ss_pred             HHcccccCCCCCCHHHHHHHHHhccCC
Q 039505          311 MASVSSKVNRRPLMNQVVMVREQGNGS  337 (342)
Q Consensus       311 ~~Cl~~~P~~RPsm~eV~~~L~~i~~~  337 (342)
                      ..||..+|++||++.++++.|+++.+.
T Consensus       245 ~~c~~~~p~~Rp~~~~l~~~l~~~~~~  271 (303)
T cd05110         245 VKCWMIDADSRPKFKELAAEFSRMARD  271 (303)
T ss_pred             HHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence            999999999999999999999987543

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.71  E-value=3.1e-17  Score=148.33  Aligned_cols=162  Identities=18%  Similarity=0.205  Sum_probs=102.6

Q ss_pred             cccCcCCCeeEEEEEECCCeEEEEEccCCCCCCCc---c--------------EE-EeeCC---cEEE--E---------
Q 039505          165 RVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGHV---P--------------IV-ECHVG---ALIT--I---------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~~vAVK~l~~~~~~~~~---~--------------Lv-~c~~~---~lv~--m---------  212 (342)
                      +.||+|+||.||+|...+..||||.++........   +              ++ ++...   .+++  +         
T Consensus        12 ~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~   91 (256)
T cd05039          12 ATIGKGEFGDVMLGDYRGQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYL   91 (256)
T ss_pred             eeeecCCCceEEEEEecCcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCCCcHHHHH
Confidence            89999999999999987669999999766431000   1              22 33222   3332  1         


Q ss_pred             -------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCccc---cccccCcceee-
Q 039505          213 -------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHMS---TTIAGTAGFLN-  267 (342)
Q Consensus       213 -------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~~---~~~~Gt~~y~a-  267 (342)
                                         ++.||.|||+   .+++||||||+||+++++  .++.+++......   ....++..|+| 
T Consensus        92 ~~~~~~~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ap  168 (256)
T cd05039          92 RSRGRAVITLAQQLGFALDVCEGMEYLEE---KNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVKWTAP  168 (256)
T ss_pred             HhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCccchhcccceEEEeCCCCEEEcccccccccccccccCCCcccccCc
Confidence                               8899999999   999999999999999987  3444433221111   11122333444 


Q ss_pred             -------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCC
Q 039505          268 -------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRR  321 (342)
Q Consensus       268 -------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~R  321 (342)
                                               + |+.|+.......   +..  .+........+...+..+.+++.+||..+|++|
T Consensus       169 e~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  243 (256)
T cd05039         169 EALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVP--HVEKGYRMEAPEGCPPEVYKVMKDCWELDPAKR  243 (256)
T ss_pred             hhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH---HHH--HHhcCCCCCCccCCCHHHHHHHHHHhccChhhC
Confidence                                     3 666665432111   000  000011111222344668899999999999999


Q ss_pred             CCHHHHHHHHHhc
Q 039505          322 PLMNQVVMVREQG  334 (342)
Q Consensus       322 Psm~eV~~~L~~i  334 (342)
                      |++.+++++|+.+
T Consensus       244 p~~~~l~~~l~~~  256 (256)
T cd05039         244 PTFKQLREQLALI  256 (256)
T ss_pred             cCHHHHHHHHhcC
Confidence            9999999999864

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.71  E-value=3e-17  Score=149.49  Aligned_cols=158  Identities=14%  Similarity=0.209  Sum_probs=95.4

Q ss_pred             cccCcCCCeeEEEEEECC-------------C-eEEEEEccCCCCCCCcc------------------EE-EeeCC---c
Q 039505          165 RVPYKGGFITVYHGQLVK-------------S-EVAMKMLSPSSSQGHVP------------------IV-ECHVG---A  208 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~-------------~-~vAVK~l~~~~~~~~~~------------------Lv-~c~~~---~  208 (342)
                      +.||+|+||.||+|.+..             . .||+|.+..........                  +. +|...   +
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            468999999999998632             1 58999876543221111                  22 44433   3


Q ss_pred             EEE--E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC---------ccccCC
Q 039505          209 LIT--I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS---------RISPVE  250 (342)
Q Consensus       209 lv~--m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a---------~~~~~~  250 (342)
                      +++  +                           +++||+|||+   .+|+||||||+|||++.+.         ++.+++
T Consensus        81 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g  157 (262)
T cd05077          81 MVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLED---KDLVHGNVCTKNILLAREGIDGECGPFIKLSDPG  157 (262)
T ss_pred             EEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhh---CCeECCCCCcccEEEecCCccCCCCceeEeCCCC
Confidence            333  1                           8999999999   9999999999999998652         222322


Q ss_pred             CCCc--cccccccCcceee----------------------------cCCCCcccccccccccccccccccccCCCCCCh
Q 039505          251 GGTH--MSTTIAGTAGFLN----------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDI  300 (342)
Q Consensus       251 ~~~~--~~~~~~Gt~~y~a----------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~  300 (342)
                      ....  ......|+..|+|                            +|+.|+........     ........  ....
T Consensus       158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~-----~~~~~~~~--~~~~  230 (262)
T cd05077         158 IPITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK-----ERFYEGQC--MLVT  230 (262)
T ss_pred             CCccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH-----HHHHhcCc--cCCC
Confidence            2211  1122456777777                            23333322110000     00000000  0011


Q ss_pred             HHHHHHHHHHHHcccccCCCCCCHHHHHHHHH
Q 039505          301 ISVGKAVEIAMASVSSKVNRRPLMNQVVMVRE  332 (342)
Q Consensus       301 ~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~  332 (342)
                      .....+.+++.+||+.+|++||++.++++.++
T Consensus       231 ~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~  262 (262)
T cd05077         231 PSCKELADLMTHCMNYDPNQRPFFRAIMRDIN  262 (262)
T ss_pred             CChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence            12356889999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.71  E-value=4.1e-17  Score=154.46  Aligned_cols=117  Identities=14%  Similarity=0.159  Sum_probs=75.9

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc--------ccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM--------STTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~--------~~~~~Gt~~y~a---------------  267 (342)
                      +++||+|||+   .+|+||||||+|||++++  .++.+++.....        .....++..|+|               
T Consensus       182 i~~aL~~lH~---~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di  258 (337)
T cd05054         182 VARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDV  258 (337)
T ss_pred             HHHHHHHHHh---CCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCccccH
Confidence            6889999999   999999999999999987  444444332211        112344566776               


Q ss_pred             -----------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhcc
Q 039505          268 -----------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       268 -----------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                                 | |+.|+.......  .+..  .+........+......+.+++.+||+.+|++||++.|+++.|+++-
T Consensus       259 ~SlGv~l~el~t~g~~p~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~  334 (337)
T cd05054         259 WSFGVLLWEIFSLGASPYPGVQIDE--EFCR--RLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLL  334 (337)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCccH--HHHH--HHhccCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence                       4 777775432111  0000  00000111112233456889999999999999999999999998864


Q ss_pred             C
Q 039505          336 G  336 (342)
Q Consensus       336 ~  336 (342)
                      .
T Consensus       335 ~  335 (337)
T cd05054         335 Q  335 (337)
T ss_pred             h
Confidence            3

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.71  E-value=1.1e-17  Score=160.52  Aligned_cols=164  Identities=20%  Similarity=0.227  Sum_probs=104.7

Q ss_pred             HhhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCC---CCC----cc--------------EE-EeeCC---cE
Q 039505          159 VTNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSS---QGH----VP--------------IV-ECHVG---AL  209 (342)
Q Consensus       159 at~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~---~~~----~~--------------Lv-~c~~~---~l  209 (342)
                      ..++|.  +.||+|+||.||+++...+  .||+|+++....   ...    .+              +. ++..+   ++
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l  120 (370)
T cd05596          41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM  120 (370)
T ss_pred             CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence            345566  8999999999999998755  999999864211   000    01              22 22222   33


Q ss_pred             EE--E-------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------
Q 039505          210 IT--I-------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------  254 (342)
Q Consensus       210 v~--m-------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------  254 (342)
                      |+  +                         ++.||+|||+   .+|+||||||+|||++++  .++.+++....      
T Consensus       121 v~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~  197 (370)
T cd05596         121 VMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGM  197 (370)
T ss_pred             EEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCc
Confidence            33  1                         8899999999   999999999999999988  44444433211      


Q ss_pred             -cccccccCcceee------------------------------cCCCCcccccccccccccccccccc--cCCCCCChH
Q 039505          255 -MSTTIAGTAGFLN------------------------------TKNPVISKSIENGNSHLRDKSTVDL--SFKGEFDII  301 (342)
Q Consensus       255 -~~~~~~Gt~~y~a------------------------------tG~~P~~~~~~~~~~~l~~~~~~d~--~l~~~~~~~  301 (342)
                       ......||+.|+|                              ||+.||.......  .+  ..+.+.  .+.-+....
T Consensus       198 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~--~~--~~i~~~~~~~~~~~~~~  273 (370)
T cd05596         198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG--TY--SKIMDHKNSLTFPDDIE  273 (370)
T ss_pred             ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHH--HH--HHHHcCCCcCCCCCcCC
Confidence             1123568888887                              7777776543211  00  111111  111111112


Q ss_pred             HHHHHHHHHHHcccccCCC--CCCHHHHHH
Q 039505          302 SVGKAVEIAMASVSSKVNR--RPLMNQVVM  329 (342)
Q Consensus       302 ~~~~l~~l~~~Cl~~~P~~--RPsm~eV~~  329 (342)
                      ....+.+++..|++.+|++  ||++.++++
T Consensus       274 ~s~~~~~li~~~L~~~p~r~~R~s~~ell~  303 (370)
T cd05596         274 ISKQAKDLICAFLTDREVRLGRNGVDEIKS  303 (370)
T ss_pred             CCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence            3456788999999999988  999999964

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.70  E-value=2.9e-17  Score=153.17  Aligned_cols=167  Identities=16%  Similarity=0.205  Sum_probs=104.3

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-----c--------------EE-EeeCC---cEEE--E-----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-----P--------------IV-ECHVG---ALIT--I-----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-----~--------------Lv-~c~~~---~lv~--m-----  212 (342)
                      +.||+|+||+||+|+...+  .||+|.++........     +              +. ++..+   ++++  +     
T Consensus        12 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~   91 (309)
T cd07872          12 EKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDKDLK   91 (309)
T ss_pred             EEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCCCCHH
Confidence            7899999999999998755  8999998755322211     1              23 33332   3443  1     


Q ss_pred             ---------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------cccccccCc
Q 039505          213 ---------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIAGTA  263 (342)
Q Consensus       213 ---------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~Gt~  263 (342)
                                           +++||+|||+   .+|+||||||+|||++++  .++.+++....      ......+|+
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  168 (309)
T cd07872          92 QYMDDCGNIMSMHNVKIFLYQILRGLAYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVVTL  168 (309)
T ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECccccceecCCCccccccccccc
Confidence                                 8899999999   999999999999999988  44444432211      111235667


Q ss_pred             ceee---------------------------cCCCCcccccccc-cccccc----------------cccccccCCCC--
Q 039505          264 GFLN---------------------------TKNPVISKSIENG-NSHLRD----------------KSTVDLSFKGE--  297 (342)
Q Consensus       264 ~y~a---------------------------tG~~P~~~~~~~~-~~~l~~----------------~~~~d~~l~~~--  297 (342)
                      .|+|                           ||+.||....... ...+..                .+..+......  
T Consensus       169 ~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (309)
T cd07872         169 WYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKP  248 (309)
T ss_pred             cccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCC
Confidence            7776                           8998886543211 000000                00000000000  


Q ss_pred             -----CChHHHHHHHHHHHHcccccCCCCCCHHHHHH--HHHhc
Q 039505          298 -----FDIISVGKAVEIAMASVSSKVNRRPLMNQVVM--VREQG  334 (342)
Q Consensus       298 -----~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~--~L~~i  334 (342)
                           ........+.+++.+|++.+|++|||+.|+++  .++.+
T Consensus       249 ~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~  292 (309)
T cd07872         249 QPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSL  292 (309)
T ss_pred             CchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhc
Confidence                 00112345789999999999999999999985  34443

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.70  E-value=3e-17  Score=154.69  Aligned_cols=110  Identities=18%  Similarity=0.190  Sum_probs=70.9

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-------cccccccCcceee----------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-------MSTTIAGTAGFLN----------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-------~~~~~~Gt~~y~a----------------  267 (342)
                      +++||+|||+   .+|+||||||+|||++.+  .++.+++....       ......||+.|+|                
T Consensus       114 i~~~l~~lH~---~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di  190 (332)
T cd05614         114 IILALEHLHK---LGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDW  190 (332)
T ss_pred             HHHHHHHHHH---CCcEecCCCHHHeEECCCCCEEEeeCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCcccc
Confidence            8999999999   999999999999999988  44444443221       1123568999988                


Q ss_pred             -----------cCCCCccccccccccccccccc--ccccCCCCCChHHHHHHHHHHHHcccccCCCCC-----CHHHHHH
Q 039505          268 -----------TKNPVISKSIENGNSHLRDKST--VDLSFKGEFDIISVGKAVEIAMASVSSKVNRRP-----LMNQVVM  329 (342)
Q Consensus       268 -----------tG~~P~~~~~~~~~~~l~~~~~--~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----sm~eV~~  329 (342)
                                 ||+.|+...........+...+  .++.+    +......+.+++.+||+.+|++||     ++.++++
T Consensus       191 wslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~  266 (332)
T cd05614         191 WSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPF----PSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE  266 (332)
T ss_pred             ccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCCC----CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence                       7777765432111000000011  12222    222334578899999999999999     6667764

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.70  E-value=1.8e-17  Score=155.92  Aligned_cols=155  Identities=18%  Similarity=0.208  Sum_probs=98.9

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCC---CCCcc-------------------EE-EeeCC---cEEE--E--
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSS---QGHVP-------------------IV-ECHVG---ALIT--I--  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~---~~~~~-------------------Lv-~c~~~---~lv~--m--  212 (342)
                      +.||+|+||+||+|+...+  .||+|++.....   .....                   +. .+...   ++++  +  
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            4699999999999998755  899999864321   00000                   22 22222   2332  1  


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------cccccc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIA  260 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~  260 (342)
                                              +++||+|||+   .+|+||||||+|||++.+  .++.+++....      ......
T Consensus        81 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~  157 (325)
T cd05602          81 GELFYHLQRERCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFC  157 (325)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCccccc
Confidence                                    8899999999   999999999999999988  34444432211      123357


Q ss_pred             cCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcc
Q 039505          261 GTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASV  314 (342)
Q Consensus       261 Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl  314 (342)
                      ||+.|+|                          ||+.||.......   +. ..+.....  .........+.+++.+|+
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~-~~i~~~~~--~~~~~~~~~~~~li~~~l  231 (325)
T cd05602         158 GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE---MY-DNILNKPL--QLKPNITNSARHLLEGLL  231 (325)
T ss_pred             CCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHH---HH-HHHHhCCc--CCCCCCCHHHHHHHHHHc
Confidence            9999998                          7777776433211   00 01111111  111223445788999999


Q ss_pred             cccCCCCCCHHHHH
Q 039505          315 SSKVNRRPLMNQVV  328 (342)
Q Consensus       315 ~~~P~~RPsm~eV~  328 (342)
                      +.+|.+||++.+.+
T Consensus       232 ~~~p~~R~~~~~~~  245 (325)
T cd05602         232 QKDRTKRLGAKDDF  245 (325)
T ss_pred             ccCHHHCCCCCCCH
Confidence            99999999876433

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.70  E-value=1.3e-17  Score=154.34  Aligned_cols=156  Identities=21%  Similarity=0.194  Sum_probs=100.0

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC-------cc-----------EE----EeeCC---cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH-------VP-----------IV----ECHVG---ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~-------~~-----------Lv----~c~~~---~lv~--m---  212 (342)
                      +.||+|+||.||+|....+  .||||++........       .+           ++    ++.++   ++++  +   
T Consensus         7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~   86 (291)
T cd05612           7 KTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPGG   86 (291)
T ss_pred             eeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeCCCCC
Confidence            8899999999999998754  999999864321110       01           11    11111   2222  1   


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc---cccccccCcc
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH---MSTTIAGTAG  264 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~---~~~~~~Gt~~  264 (342)
                                             +++||+|||+   .+|+||||||+|||++++  .++.+++....   ......||+.
T Consensus        87 ~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~  163 (291)
T cd05612          87 ELFSYLRNSGRFSNSTGLFYASEIVCALEYLHS---KEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTLCGTPE  163 (291)
T ss_pred             CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEEecCcchhccCCcccccCChh
Confidence                                   8899999999   999999999999999987  44444433221   1123568889


Q ss_pred             eee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccC
Q 039505          265 FLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKV  318 (342)
Q Consensus       265 y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P  318 (342)
                      |+|                          ||+.|+.......   +. ..+.....  ..+......+.+++.+||+.||
T Consensus       164 y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~---~~-~~i~~~~~--~~~~~~~~~~~~li~~~l~~dp  237 (291)
T cd05612         164 YLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFG---IY-EKILAGKL--EFPRHLDLYAKDLIKKLLVVDR  237 (291)
T ss_pred             hcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HH-HHHHhCCc--CCCccCCHHHHHHHHHHcCCCH
Confidence            988                          8888876543211   00 01111111  1122223457889999999999


Q ss_pred             CCCCC-----HHHHHH
Q 039505          319 NRRPL-----MNQVVM  329 (342)
Q Consensus       319 ~~RPs-----m~eV~~  329 (342)
                      .+||+     +.++++
T Consensus       238 ~~R~~~~~~~~~~~l~  253 (291)
T cd05612         238 TRRLGNMKNGADDVKN  253 (291)
T ss_pred             HHccCCccCCHHHHhc
Confidence            99995     777664

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.70  E-value=4.4e-17  Score=149.74  Aligned_cols=113  Identities=14%  Similarity=0.133  Sum_probs=73.4

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc--------cccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH--------MSTTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~--------~~~~~~Gt~~y~a---------------  267 (342)
                      ++.||+|||+   .+|+||||||+|||++++  .++.+++....        ......++..|+|               
T Consensus       133 i~~al~~lH~---~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv  209 (283)
T cd05090         133 IAAGMEYLSS---HFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDI  209 (283)
T ss_pred             HHHHHHHHHh---cCeehhccccceEEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhh
Confidence            7789999999   899999999999999988  44544433211        1112334556766               


Q ss_pred             -----------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHh
Q 039505          268 -----------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQ  333 (342)
Q Consensus       268 -----------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~  333 (342)
                                 | |..|+.......   +.  +.++.......+......+.+++.+||+.+|++||++.+|.+.|+.
T Consensus       210 ~slG~il~el~~~g~~p~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         210 WSFGVVLWEIFSFGLQPYYGFSNQE---VI--EMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             HHHHHHHHHHHcCCCCCCCCCCHHH---HH--HHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence                       4 777765432211   00  1111111111223344568889999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.70  E-value=1e-17  Score=152.42  Aligned_cols=159  Identities=20%  Similarity=0.233  Sum_probs=101.0

Q ss_pred             cccCcCCCeeEEEEEEC----C-C-eEEEEEccCCCCCC-Ccc------------------EE-EeeCC---cEEE--E-
Q 039505          165 RVPYKGGFITVYHGQLV----K-S-EVAMKMLSPSSSQG-HVP------------------IV-ECHVG---ALIT--I-  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~----~-~-~vAVK~l~~~~~~~-~~~------------------Lv-~c~~~---~lv~--m-  212 (342)
                      +.||.|+||.||+|.+.    . . .|+||.++...... .+.                  ++ +|...   .+|+  + 
T Consensus         5 ~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~~   84 (259)
T PF07714_consen    5 KQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYCP   84 (259)
T ss_dssp             EEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--T
T ss_pred             eEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccccc
Confidence            68999999999999998    1 1 89999996543221 111                  44 66643   4444  2 


Q ss_pred             ---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc--------
Q 039505          213 ---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM--------  255 (342)
Q Consensus       213 ---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~--------  255 (342)
                                                 +|+||+|||+   .+++|+||+++||+++++  .++.+++.....        
T Consensus        85 ~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~---~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~  161 (259)
T PF07714_consen   85 GGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHS---NNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKN  161 (259)
T ss_dssp             TEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHH---TTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEE
T ss_pred             ccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccccc
Confidence                                       9999999999   899999999999999988  454444322111        


Q ss_pred             ccccccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHH
Q 039505          256 STTIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVE  308 (342)
Q Consensus       256 ~~~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~  308 (342)
                      .....+...|+|                          | |+.|+.......   +. ..+.+... ...+..+...+.+
T Consensus       162 ~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~---~~-~~~~~~~~-~~~~~~~~~~~~~  236 (259)
T PF07714_consen  162 DSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEE---II-EKLKQGQR-LPIPDNCPKDIYS  236 (259)
T ss_dssp             STTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHH---HH-HHHHTTEE-TTSBTTSBHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccc---cc-cccccccc-ceeccchhHHHHH
Confidence            111335556666                          6 678876543221   11 11111111 1123334556889


Q ss_pred             HHHHcccccCCCCCCHHHHHHHH
Q 039505          309 IAMASVSSKVNRRPLMNQVVMVR  331 (342)
Q Consensus       309 l~~~Cl~~~P~~RPsm~eV~~~L  331 (342)
                      ++..||+.+|++||+|.++++.|
T Consensus       237 li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  237 LIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             HHHHHT-SSGGGS--HHHHHHHH
T ss_pred             HHHHHcCCChhhCcCHHHHHhcC
Confidence            99999999999999999999876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.70  E-value=4.5e-17  Score=147.68  Aligned_cols=160  Identities=18%  Similarity=0.218  Sum_probs=101.0

Q ss_pred             cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCC---cc--------------EE-EeeCC---cEEE--E--------
Q 039505          165 RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGH---VP--------------IV-ECHVG---ALIT--I--------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~---~~--------------Lv-~c~~~---~lv~--m--------  212 (342)
                      +.||+|+||+||+|.+.++ .+|||.+........   .+              +. +|...   ++++  +        
T Consensus        10 ~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~   89 (256)
T cd05113          10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNY   89 (256)
T ss_pred             eEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCCcHHHH
Confidence            7899999999999998877 899999875432111   01              22 33333   3333  1        


Q ss_pred             -------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCcc-------ccccccCcc
Q 039505          213 -------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHM-------STTIAGTAG  264 (342)
Q Consensus       213 -------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~~-------~~~~~Gt~~  264 (342)
                                         ++.||+|||+   .+++|+||||+||+++++.  ++.+++.....       .....++..
T Consensus        90 i~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~  166 (256)
T cd05113          90 LREHGKRFQPSQLLEMCKDVCEGMAYLES---KQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVR  166 (256)
T ss_pred             HHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCCEEECCCccceecCCCceeecCCCccChh
Confidence                               8999999999   9999999999999999873  34433221110       011223345


Q ss_pred             eee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHccccc
Q 039505          265 FLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSK  317 (342)
Q Consensus       265 y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~  317 (342)
                      |++                          | |+.|+.......   +.. .+... .....+......+.+++.+||+.+
T Consensus       167 y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~---~~~-~~~~~-~~~~~~~~~~~~~~~li~~cl~~~  241 (256)
T cd05113         167 WSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE---TVE-KVSQG-LRLYRPHLASEKVYAIMYSCWHEK  241 (256)
T ss_pred             hCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH---HHH-HHhcC-CCCCCCCCCCHHHHHHHHHHcCCC
Confidence            555                          5 777765433211   000 01110 001111223456889999999999


Q ss_pred             CCCCCCHHHHHHHHH
Q 039505          318 VNRRPLMNQVVMVRE  332 (342)
Q Consensus       318 P~~RPsm~eV~~~L~  332 (342)
                      |++||++.+++..|+
T Consensus       242 p~~Rp~~~~ll~~~~  256 (256)
T cd05113         242 AEERPTFQQLLSSIE  256 (256)
T ss_pred             cccCCCHHHHHHhhC
Confidence            999999999998774

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.70  E-value=4.1e-17  Score=150.99  Aligned_cols=115  Identities=14%  Similarity=0.196  Sum_probs=70.7

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc--------ccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM--------STTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~--------~~~~~Gt~~y~a---------------  267 (342)
                      +++||+|||+   .+++||||||+||+++++  .++.+++.....        .....++..|+|               
T Consensus       138 i~~al~~lH~---~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv  214 (295)
T cd05097         138 IASGMKYLAS---LNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDV  214 (295)
T ss_pred             HHHHHHHHHh---cCeeccccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhH
Confidence            7889999999   999999999999999987  444443322110        111234556776               


Q ss_pred             -----------c--CCCCcccccccccccccc--ccccc---ccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          268 -----------T--KNPVISKSIENGNSHLRD--KSTVD---LSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       268 -----------t--G~~P~~~~~~~~~~~l~~--~~~~d---~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                                 |  |..|+.......   ++.  .+..+   .......+......+.+++.+||+.+|++||+|.+|++
T Consensus       215 wSlG~~l~el~~~~~~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~  291 (295)
T cd05097         215 WAFGVTLWEMFTLCKEQPYSLLSDEQ---VIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH  291 (295)
T ss_pred             HHHHHHHHHHHHcCCCCCCcccChHH---HHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence                       2  444544322111   000  00000   00101112223456899999999999999999999999


Q ss_pred             HHHh
Q 039505          330 VREQ  333 (342)
Q Consensus       330 ~L~~  333 (342)
                      .|++
T Consensus       292 ~l~~  295 (295)
T cd05097         292 FLRE  295 (295)
T ss_pred             HHhC
Confidence            9864

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.70  E-value=2.8e-18  Score=152.36  Aligned_cols=161  Identities=19%  Similarity=0.224  Sum_probs=101.2

Q ss_pred             cccCcCCCeeEEEEEEC-CC-eEEEEEccCCCCCCCcc-----------------EE-------------------EeeC
Q 039505          165 RVPYKGGFITVYHGQLV-KS-EVAMKMLSPSSSQGHVP-----------------IV-------------------ECHV  206 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~-~~-~vAVK~l~~~~~~~~~~-----------------Lv-------------------~c~~  206 (342)
                      ++||+|+||+|||+... ++ .||.|.++-..-.....                 ++                   +|..
T Consensus        25 ~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c~~  104 (375)
T KOG0591|consen   25 KKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVMELCDA  104 (375)
T ss_pred             HHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHHhhcc
Confidence            88999999999999764 55 99999987432221111                 33                   4443


Q ss_pred             C----cE--------------EE--E--ehhhhhhhhccCCC-CeeeCCCCcceEEecCC--CccccCCCCC------cc
Q 039505          207 G----AL--------------IT--I--PKEGLEYLHQGLKH-PIIQRDMKSTNILLNEK--SRISPVEGGT------HM  255 (342)
Q Consensus       207 ~----~l--------------v~--m--ia~gL~yLH~~~~~-~IiHrDlKp~NILLd~~--a~~~~~~~~~------~~  255 (342)
                      |    ++              ||  +  +++||..+|+..++ -|+||||||.||+|+.+  .|+.+++.+.      ..
T Consensus       105 GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~tf  184 (375)
T KOG0591|consen  105 GDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKTTF  184 (375)
T ss_pred             cCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcchhHH
Confidence            3    00              00  0  89999999994333 38999999999999998  5555544332      12


Q ss_pred             ccccccCcceee--------------------------cCCCCcccccccccccccc--cccccccCCCCCChHHHHHHH
Q 039505          256 STTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRD--KSTVDLSFKGEFDIISVGKAV  307 (342)
Q Consensus       256 ~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~--~~~~d~~l~~~~~~~~~~~l~  307 (342)
                      ..+.+|||.||+                          .=++||.+..      +.+  .++-.-....-........+.
T Consensus       185 A~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n------~~~L~~KI~qgd~~~~p~~~YS~~l~  258 (375)
T KOG0591|consen  185 AHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDN------LLSLCKKIEQGDYPPLPDEHYSTDLR  258 (375)
T ss_pred             HHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCccccc------HHHHHHHHHcCCCCCCcHHHhhhHHH
Confidence            244799999998                          2334444331      111  111111111111244566788


Q ss_pred             HHHHHcccccCCCCCCHHHHHHHH
Q 039505          308 EIAMASVSSKVNRRPLMNQVVMVR  331 (342)
Q Consensus       308 ~l~~~Cl~~~P~~RPsm~eV~~~L  331 (342)
                      +|+..|+..||+.||+....+..+
T Consensus       259 ~li~~ci~vd~~~RP~t~~~v~di  282 (375)
T KOG0591|consen  259 ELINMCIAVDPEQRPDTVPYVQDI  282 (375)
T ss_pred             HHHHHHccCCcccCCCcchHHHHH
Confidence            999999999999999854444433

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.70  E-value=1.9e-17  Score=155.55  Aligned_cols=152  Identities=18%  Similarity=0.196  Sum_probs=96.5

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc---c-------------------EE-EeeCC---cEEE--E--
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV---P-------------------IV-ECHVG---ALIT--I--  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~---~-------------------Lv-~c~~~---~lv~--m--  212 (342)
                      ++||+|+||+||+|+...+  .||||++.........   .                   +. .+...   ++++  +  
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            4799999999999998754  9999998643211000   0                   22 22222   2222  1  


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------cccccc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIA  260 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~  260 (342)
                                              +++||+|||+   .+|+||||||+|||++++  .++.+++....      ......
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~---~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  157 (323)
T cd05575          81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFC  157 (323)
T ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCcccccc
Confidence                                    8999999999   999999999999999988  44444432211      122356


Q ss_pred             cCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcc
Q 039505          261 GTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASV  314 (342)
Q Consensus       261 Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl  314 (342)
                      ||+.|+|                          ||+.||.......   +. ..+.....  .........+.+++.+|+
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~---~~-~~i~~~~~--~~~~~~~~~~~~li~~~l  231 (323)
T cd05575         158 GTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAE---MY-DNILNKPL--RLKPNISVSARHLLEGLL  231 (323)
T ss_pred             CChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHH---HH-HHHHcCCC--CCCCCCCHHHHHHHHHHh
Confidence            8999988                          6777765432111   00 01111111  111122455788999999


Q ss_pred             cccCCCCCCHH
Q 039505          315 SSKVNRRPLMN  325 (342)
Q Consensus       315 ~~~P~~RPsm~  325 (342)
                      +.+|++||++.
T Consensus       232 ~~~p~~R~~~~  242 (323)
T cd05575         232 QKDRTKRLGAK  242 (323)
T ss_pred             hcCHHhCCCCC
Confidence            99999999874

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.70  E-value=3.7e-17  Score=153.69  Aligned_cols=156  Identities=22%  Similarity=0.262  Sum_probs=99.7

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-------------------c-----EE-EeeCC---cEEE--E
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-------------------P-----IV-ECHVG---ALIT--I  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-------------------~-----Lv-~c~~~---~lv~--m  212 (342)
                      +.||+|+||.||+|.+..+  .||||+++........                   .     +. ++..+   ++|+  +
T Consensus         5 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~~   84 (324)
T cd05589           5 AVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEYA   84 (324)
T ss_pred             EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEcCC
Confidence            7899999999999998754  9999998643210000                   0     22 23222   3333  1


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCC------cccccc
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGT------HMSTTI  259 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~------~~~~~~  259 (342)
                                               ++.||+|||+   .+|+||||||+|||++++  .++.+++...      ......
T Consensus        85 ~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~  161 (324)
T cd05589          85 AGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHE---NKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTSTF  161 (324)
T ss_pred             CCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCccccc
Confidence                                     8899999999   999999999999999988  4444443211      112235


Q ss_pred             ccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHc
Q 039505          260 AGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMAS  313 (342)
Q Consensus       260 ~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~C  313 (342)
                      .||+.|+|                          ||+.|+.......   +.. .+.....  ..+......+.+++.+|
T Consensus       162 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~---~~~-~i~~~~~--~~p~~~~~~~~~li~~~  235 (324)
T cd05589         162 CGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEE---VFD-SIVNDEV--RYPRFLSREAISIMRRL  235 (324)
T ss_pred             ccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHH---HHH-HHHhCCC--CCCCCCCHHHHHHHHHH
Confidence            78999998                          7888876543221   000 0111000  11222344578899999


Q ss_pred             ccccCCCCCC-----HHHHHH
Q 039505          314 VSSKVNRRPL-----MNQVVM  329 (342)
Q Consensus       314 l~~~P~~RPs-----m~eV~~  329 (342)
                      |+.+|++||+     +.++++
T Consensus       236 L~~dP~~R~~~~~~~~~~l~~  256 (324)
T cd05589         236 LRRNPERRLGSGEKDAEDVKK  256 (324)
T ss_pred             hhcCHhHcCCCCCCCHHHHhh
Confidence            9999999994     555543

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.70  E-value=7.6e-18  Score=152.82  Aligned_cols=158  Identities=12%  Similarity=0.151  Sum_probs=95.7

Q ss_pred             cccCcCCCeeEEEEEECCC---------eEEEEEccCCCCCCCcc------------------EE-EeeCC---cEEE--
Q 039505          165 RVPYKGGFITVYHGQLVKS---------EVAMKMLSPSSSQGHVP------------------IV-ECHVG---ALIT--  211 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~---------~vAVK~l~~~~~~~~~~------------------Lv-~c~~~---~lv~--  211 (342)
                      +.||+|+||.||+|.....         .+|+|.+........+.                  +. ++..+   .+++  
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            4699999999999987432         48889886543211111                  22 33222   3333  


Q ss_pred             E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC----------ccccCCCCCc
Q 039505          212 I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS----------RISPVEGGTH  254 (342)
Q Consensus       212 m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a----------~~~~~~~~~~  254 (342)
                      +                           ++.||+|||+   .+|+||||||+|||++.+.          ++.+++....
T Consensus        81 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~  157 (258)
T cd05078          81 VKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLED---KGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISIT  157 (258)
T ss_pred             CCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEEEecccccccCCCceEEecccccccc
Confidence            1                           8899999999   9999999999999998762          3333332211


Q ss_pred             --cccccccCcceee---------------------------cCC-CCcccccccccccccccccccccCCCCCChHHHH
Q 039505          255 --MSTTIAGTAGFLN---------------------------TKN-PVISKSIENGNSHLRDKSTVDLSFKGEFDIISVG  304 (342)
Q Consensus       255 --~~~~~~Gt~~y~a---------------------------tG~-~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~  304 (342)
                        ......+++.|+|                           +|. .|+.......   .  ......  ....+.....
T Consensus       158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~---~--~~~~~~--~~~~~~~~~~  230 (258)
T cd05078         158 VLPKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK---K--LQFYED--RHQLPAPKWT  230 (258)
T ss_pred             cCCchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH---H--HHHHHc--cccCCCCCcH
Confidence              1122456777777                           332 2222111100   0  000000  0111222335


Q ss_pred             HHHHHHHHcccccCCCCCCHHHHHHHHH
Q 039505          305 KAVEIAMASVSSKVNRRPLMNQVVMVRE  332 (342)
Q Consensus       305 ~l~~l~~~Cl~~~P~~RPsm~eV~~~L~  332 (342)
                      ++.+++.+||+.+|++|||+.++++.|+
T Consensus       231 ~~~~li~~~l~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         231 ELANLINQCMDYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             HHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            6889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.70  E-value=7.2e-17  Score=147.19  Aligned_cols=160  Identities=16%  Similarity=0.136  Sum_probs=95.5

Q ss_pred             cccCcCCCeeEEEEEECCC----eEEEEEccCCCCCCCc-----c--------------EE-EeeCC---cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVKS----EVAMKMLSPSSSQGHV-----P--------------IV-ECHVG---ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~----~vAVK~l~~~~~~~~~-----~--------------Lv-~c~~~---~lv~--m---  212 (342)
                      +.||+|+||.||+|.+.++    .+|+|.++........     +              ++ +|.+.   ++++  +   
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG   80 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence            4689999999999987543    7999998765322111     1              22 33322   2222  1   


Q ss_pred             ----------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc--------
Q 039505          213 ----------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH--------  254 (342)
Q Consensus       213 ----------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~--------  254 (342)
                                                  +++||+|||+   .+++||||||+||+++.+  .++.+++....        
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~  157 (269)
T cd05087          81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHK---NNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV  157 (269)
T ss_pred             cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence                                        8899999999   999999999999999987  34444332211        


Q ss_pred             cccccccCcceee---------------------------------c-CCCCccccccccc-ccccc---cccccccCCC
Q 039505          255 MSTTIAGTAGFLN---------------------------------T-KNPVISKSIENGN-SHLRD---KSTVDLSFKG  296 (342)
Q Consensus       255 ~~~~~~Gt~~y~a---------------------------------t-G~~P~~~~~~~~~-~~l~~---~~~~d~~l~~  296 (342)
                      ......|+..|+|                                 + |+.|+........ ...+.   ....++.+  
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--  235 (269)
T cd05087         158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRL--  235 (269)
T ss_pred             cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCcc--
Confidence            0111234444544                                 3 6666654322110 00000   11111111  


Q ss_pred             CCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHH
Q 039505          297 EFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVRE  332 (342)
Q Consensus       297 ~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~  332 (342)
                        .......+.+++..|| .+|++|||+.||+..|+
T Consensus       236 --~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         236 --KLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             --CCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence              1122344677888998 58999999999998875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.70  E-value=5.4e-17  Score=148.55  Aligned_cols=113  Identities=10%  Similarity=0.098  Sum_probs=73.3

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc--------cccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH--------MSTTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~--------~~~~~~Gt~~y~a---------------  267 (342)
                      ++.||.|||+   .+++||||||+||+++.+  .++.+++....        ......+++.|+|               
T Consensus       131 i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di  207 (280)
T cd05049         131 IASGMVYLAS---QHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDV  207 (280)
T ss_pred             HHHHHHHHhh---CCeeccccccceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhH
Confidence            7889999999   899999999999999988  34444332211        1112334566777               


Q ss_pred             -----------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHh
Q 039505          268 -----------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQ  333 (342)
Q Consensus       268 -----------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~  333 (342)
                                 | |+.|+.......   ++. .+..... ...+......+.+++.+||+.+|++||++.||++.|++
T Consensus       208 ~slG~il~e~~~~g~~p~~~~~~~~---~~~-~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~  280 (280)
T cd05049         208 WSFGVVLWEIFTYGKQPWYGLSNEE---VIE-CITQGRL-LQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK  280 (280)
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCHHH---HHH-HHHcCCc-CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence                       5 777765433211   010 0001011 11122344568899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.70  E-value=4.3e-17  Score=146.78  Aligned_cols=161  Identities=16%  Similarity=0.229  Sum_probs=101.0

Q ss_pred             cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCCc-----c--------------EE-EeeCC---cEEE--E------
Q 039505          165 RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGHV-----P--------------IV-ECHVG---ALIT--I------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~~-----~--------------Lv-~c~~~---~lv~--m------  212 (342)
                      ++||+|+||.||++.+.++ .||+|.+.........     +              ++ ++...   .+++  +      
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~   80 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL   80 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence            4799999999999998767 9999998765432111     0              22 33333   3333  1      


Q ss_pred             ---------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCccc--------ccccc
Q 039505          213 ---------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHMS--------TTIAG  261 (342)
Q Consensus       213 ---------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~~--------~~~~G  261 (342)
                                           ++.||+|||+   .+++||||||+|||++.+  .++.+++......        ....+
T Consensus        81 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~  157 (251)
T cd05041          81 TFLRKKKNRLTVKKLLQMSLDAAAGMEYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQI  157 (251)
T ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcc
Confidence                                 7789999999   899999999999999987  3444333221100        01112


Q ss_pred             Ccceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcc
Q 039505          262 TAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASV  314 (342)
Q Consensus       262 t~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl  314 (342)
                      +..|+|                          | |..|+........     ...+........+......+.+++.+|+
T Consensus       158 ~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~li~~~l  232 (251)
T cd05041         158 PIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQT-----RERIESGYRMPAPQLCPEEIYRLMLQCW  232 (251)
T ss_pred             eeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHH-----HHHHhcCCCCCCCccCCHHHHHHHHHHh
Confidence            334555                          4 5556544321110     0111111111122334567899999999


Q ss_pred             cccCCCCCCHHHHHHHHHh
Q 039505          315 SSKVNRRPLMNQVVMVREQ  333 (342)
Q Consensus       315 ~~~P~~RPsm~eV~~~L~~  333 (342)
                      +.+|++||++.|+++.|+.
T Consensus       233 ~~~p~~Rp~~~ell~~l~~  251 (251)
T cd05041         233 AYDPENRPSFSEIYNELQI  251 (251)
T ss_pred             ccChhhCcCHHHHHHHhhC
Confidence            9999999999999998863

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.70  E-value=1e-16  Score=155.31  Aligned_cols=117  Identities=13%  Similarity=0.180  Sum_probs=76.0

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc--------cccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH--------MSTTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~--------~~~~~~Gt~~y~a---------------  267 (342)
                      +++||+|||+   .+|+||||||+|||++++  .++.+++....        ......++..|+|               
T Consensus       246 i~~aL~~LH~---~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di  322 (400)
T cd05105         246 VARGMEFLAS---KNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDV  322 (400)
T ss_pred             HHHHHHHHHh---CCeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhH
Confidence            6789999999   999999999999999988  45544433211        1112345667887               


Q ss_pred             -----------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhcc
Q 039505          268 -----------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       268 -----------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                                 + |..|+.......  .+..  .+........+......+.+++.+||+.+|++||++.+|+++|+++.
T Consensus       323 wSlGvil~ellt~g~~P~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~  398 (400)
T cd05105         323 WSYGILLWEIFSLGGTPYPGMIVDS--TFYN--KIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL  398 (400)
T ss_pred             HHHHHHHHHHHHCCCCCCcccchhH--HHHH--HHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence                       3 666655432111  0000  00000111122334566899999999999999999999999999865


Q ss_pred             C
Q 039505          336 G  336 (342)
Q Consensus       336 ~  336 (342)
                      +
T Consensus       399 ~  399 (400)
T cd05105         399 P  399 (400)
T ss_pred             C
Confidence            4

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.70  E-value=4e-17  Score=150.57  Aligned_cols=115  Identities=10%  Similarity=0.137  Sum_probs=72.4

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc--------ccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM--------STTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~--------~~~~~Gt~~y~a---------------  267 (342)
                      ++.||.|||+   ++|+||||||+|||++++  .++.+++.....        .....++..|+|               
T Consensus       128 l~~~l~~lH~---~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv  204 (288)
T cd05061         128 IADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDM  204 (288)
T ss_pred             HHHHHHHHHh---CCCcCCCCChheEEEcCCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHH
Confidence            7889999999   999999999999999988  344443322110        111233455666               


Q ss_pred             -----------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhcc
Q 039505          268 -----------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       268 -----------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                                 + |..|+.......   +. ..+.+... ...+......+.+++.+|++.+|++|||+.++++.|+...
T Consensus       205 wslG~~l~el~~~~~~p~~~~~~~~---~~-~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~  279 (288)
T cd05061         205 WSFGVVLWEITSLAEQPYQGLSNEQ---VL-KFVMDGGY-LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL  279 (288)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCCHHH---HH-HHHHcCCC-CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence                       3 555654322111   00 01111111 1112233456899999999999999999999999988743

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.70  E-value=4.2e-17  Score=148.60  Aligned_cols=164  Identities=21%  Similarity=0.244  Sum_probs=102.7

Q ss_pred             HHhhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc---c---------------EE-EeeC-------C
Q 039505          158 RVTNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV---P---------------IV-ECHV-------G  207 (342)
Q Consensus       158 ~at~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~---~---------------Lv-~c~~-------~  207 (342)
                      .+++.|.  +.||+|+||.||+|.....  .||+|++.........   +               +. +|..       .
T Consensus         3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   82 (272)
T cd06637           3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD   82 (272)
T ss_pred             ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence            3556666  8899999999999998765  8999998654322110   0               22 3221       1


Q ss_pred             --cEEE--E----------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCC
Q 039505          208 --ALIT--I----------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGT  253 (342)
Q Consensus       208 --~lv~--m----------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~  253 (342)
                        ++++  +                            ++.||+|||+   .+|+||||||+||+++++  .++.+++...
T Consensus        83 ~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~---~~ivh~dl~~~nili~~~~~~~l~Dfg~~~  159 (272)
T cd06637          83 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSA  159 (272)
T ss_pred             EEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHEEECCCCCEEEccCCCce
Confidence              2333  1                            8899999999   899999999999999988  3444433221


Q ss_pred             c------cccccccCcceee-------------------------------cCCCCcccccccccccccc-cccccccCC
Q 039505          254 H------MSTTIAGTAGFLN-------------------------------TKNPVISKSIENGNSHLRD-KSTVDLSFK  295 (342)
Q Consensus       254 ~------~~~~~~Gt~~y~a-------------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~l~  295 (342)
                      .      ......|+..|+|                               +|+.|+.......  .... .....+.+ 
T Consensus       160 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~--~~~~~~~~~~~~~-  236 (272)
T cd06637         160 QLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR--ALFLIPRNPAPRL-  236 (272)
T ss_pred             ecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHH--HHHHHhcCCCCCC-
Confidence            1      1122456777766                               5666664322111  0000 00001111 


Q ss_pred             CCCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          296 GEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       296 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                        ........+.+++.+||+.+|.+|||+.+++.
T Consensus       237 --~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  268 (272)
T cd06637         237 --KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK  268 (272)
T ss_pred             --CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence              11223456889999999999999999999875

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.70  E-value=6.9e-17  Score=152.29  Aligned_cols=159  Identities=16%  Similarity=0.198  Sum_probs=101.1

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-------c---------------EE-EeeCC---cEEE--E--
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-------P---------------IV-ECHVG---ALIT--I--  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-------~---------------Lv-~c~~~---~lv~--m--  212 (342)
                      ++||+|+||.||+|+....  .||||+++........       +               +. ++...   ++++  +  
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            4799999999999998755  8999999754211110       0               22 33222   3333  1  


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------cccccc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIA  260 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~  260 (342)
                                              ++.||+|||+   .+|+||||||+|||++.+  .++.+++....      ......
T Consensus        81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~  157 (329)
T cd05588          81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFC  157 (329)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEECcCccccccccCCCcccccc
Confidence                                    8899999999   999999999999999988  44444433211      123357


Q ss_pred             cCcceee--------------------------cCCCCcccccccc-----cccccccccccccCCCCCChHHHHHHHHH
Q 039505          261 GTAGFLN--------------------------TKNPVISKSIENG-----NSHLRDKSTVDLSFKGEFDIISVGKAVEI  309 (342)
Q Consensus       261 Gt~~y~a--------------------------tG~~P~~~~~~~~-----~~~l~~~~~~d~~l~~~~~~~~~~~l~~l  309 (342)
                      ||+.|+|                          ||+.||+......     ........+.....  ..+......+.++
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~l  235 (329)
T cd05588         158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQI--RIPRSLSVKASSV  235 (329)
T ss_pred             CCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCC--CCCCCCCHHHHHH
Confidence            8999998                          8999986422110     00000011111111  1122234457889


Q ss_pred             HHHcccccCCCCCC------HHHHH
Q 039505          310 AMASVSSKVNRRPL------MNQVV  328 (342)
Q Consensus       310 ~~~Cl~~~P~~RPs------m~eV~  328 (342)
                      +.+|++.+|++||+      +.+++
T Consensus       236 i~~~L~~dP~~R~~~~~~~~~~~i~  260 (329)
T cd05588         236 LKGFLNKDPKERLGCHPQTGFRDIK  260 (329)
T ss_pred             HHHHhccCHHHcCCCCCCCCHHHHh
Confidence            99999999999997      56665

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.69  E-value=2e-17  Score=155.55  Aligned_cols=153  Identities=21%  Similarity=0.262  Sum_probs=99.2

Q ss_pred             cCcccCcCCCeeEEEEEECCC--eEEEEEccCCCC--CCC-c----c---------------EE-EeeCC---cEEE--E
Q 039505          163 FERVPYKGGFITVYHGQLVKS--EVAMKMLSPSSS--QGH-V----P---------------IV-ECHVG---ALIT--I  212 (342)
Q Consensus       163 f~~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~--~~~-~----~---------------Lv-~c~~~---~lv~--m  212 (342)
                      |.++||+|+||+||+|....+  .||||+++....  ... .    +               +. ++...   ++|+  +
T Consensus         4 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~   83 (323)
T cd05615           4 FLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYV   83 (323)
T ss_pred             EEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCC
Confidence            348999999999999998754  899999875321  100 0    0               11 22222   3333  1


Q ss_pred             --------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------cccc
Q 039505          213 --------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTT  258 (342)
Q Consensus       213 --------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~  258 (342)
                                                ++.||+|||+   .+|+||||||+|||++++  .++.+++....      ....
T Consensus        84 ~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~---~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~~  160 (323)
T cd05615          84 NGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHR---RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRT  160 (323)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeccccccccCCCCccccC
Confidence                                      8899999999   999999999999999988  44444432211      1223


Q ss_pred             cccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHH
Q 039505          259 IAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMA  312 (342)
Q Consensus       259 ~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~  312 (342)
                      ..||+.|+|                          ||+.|+.......   +. ..+.....  ..+......+.+++.+
T Consensus       161 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~---~~-~~i~~~~~--~~p~~~~~~~~~li~~  234 (323)
T cd05615         161 FCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE---LF-QSIMEHNV--SYPKSLSKEAVSICKG  234 (323)
T ss_pred             ccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHH---HH-HHHHhCCC--CCCccCCHHHHHHHHH
Confidence            568999998                          7888876543221   11 11111111  1122334567889999


Q ss_pred             cccccCCCCCCH
Q 039505          313 SVSSKVNRRPLM  324 (342)
Q Consensus       313 Cl~~~P~~RPsm  324 (342)
                      |++.+|++|++.
T Consensus       235 ~l~~~p~~R~~~  246 (323)
T cd05615         235 LMTKHPSKRLGC  246 (323)
T ss_pred             HcccCHhhCCCC
Confidence            999999999974

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.69  E-value=2.6e-17  Score=154.99  Aligned_cols=155  Identities=19%  Similarity=0.222  Sum_probs=98.9

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-------c------------EE----EeeCC---cEEE--E--
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-------P------------IV----ECHVG---ALIT--I--  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-------~------------Lv----~c~~~---~lv~--m--  212 (342)
                      ++||+|+||+||+|....+  .||||+++........       +            ++    ++...   ++|+  +  
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            4799999999999998765  8999999754221111       0            22    22222   3333  1  


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------cccccc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIA  260 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~  260 (342)
                                              +++||+|||+   .+|+||||||+|||++.+  .++.+++....      .....+
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  157 (327)
T cd05617          81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHE---RGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFC  157 (327)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceeccc
Confidence                                    8899999999   999999999999999988  44444432211      123367


Q ss_pred             cCcceee--------------------------cCCCCcccccccccccc---cccccccccCCCCCChHHHHHHHHHHH
Q 039505          261 GTAGFLN--------------------------TKNPVISKSIENGNSHL---RDKSTVDLSFKGEFDIISVGKAVEIAM  311 (342)
Q Consensus       261 Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l---~~~~~~d~~l~~~~~~~~~~~l~~l~~  311 (342)
                      ||+.|+|                          ||+.||...........   ....+.....  ..+......+.+++.
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~li~  235 (327)
T cd05617         158 GTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPI--RIPRFLSVKASHVLK  235 (327)
T ss_pred             CCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCC--CCCCCCCHHHHHHHH
Confidence            8999998                          89999864322110000   0011111111  112223345788999


Q ss_pred             HcccccCCCCCCH
Q 039505          312 ASVSSKVNRRPLM  324 (342)
Q Consensus       312 ~Cl~~~P~~RPsm  324 (342)
                      +|++.+|++||++
T Consensus       236 ~~L~~dP~~R~~~  248 (327)
T cd05617         236 GFLNKDPKERLGC  248 (327)
T ss_pred             HHhccCHHHcCCC
Confidence            9999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.69  E-value=3.2e-17  Score=154.39  Aligned_cols=162  Identities=17%  Similarity=0.116  Sum_probs=99.5

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC------cc-----------EE----EeeC----C----cEEE--
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH------VP-----------IV----ECHV----G----ALIT--  211 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~------~~-----------Lv----~c~~----~----~lv~--  211 (342)
                      +.||+|+||.||+|....+  .||||+++.......      .+           ++    ++..    .    ++++  
T Consensus         6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e~   85 (338)
T cd07859           6 EVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFEL   85 (338)
T ss_pred             EEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEec
Confidence            7899999999999998654  999999864321111      01           22    2211    0    3333  


Q ss_pred             E-------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc---------
Q 039505          212 I-------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM---------  255 (342)
Q Consensus       212 m-------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~---------  255 (342)
                      +                         +++||+|||+   .+|+||||||+|||++.+  .++.+++.....         
T Consensus        86 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~  162 (338)
T cd07859          86 MESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHT---ANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF  162 (338)
T ss_pred             CCCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEccCccccccccccCcccc
Confidence            1                         8899999999   999999999999999988  344443322110         


Q ss_pred             ccccccCcceee----------------------------cCCCCcccccccccccccc-----------cc--------
Q 039505          256 STTIAGTAGFLN----------------------------TKNPVISKSIENGNSHLRD-----------KS--------  288 (342)
Q Consensus       256 ~~~~~Gt~~y~a----------------------------tG~~P~~~~~~~~~~~l~~-----------~~--------  288 (342)
                      .....||+.|+|                            ||+.||...........+.           ..        
T Consensus       163 ~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  242 (338)
T cd07859         163 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARR  242 (338)
T ss_pred             ccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHH
Confidence            122467888887                            7888875432110000000           00        


Q ss_pred             c---ccccCCCC---CChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          289 T---VDLSFKGE---FDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       289 ~---~d~~l~~~---~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      .   +.+.....   ........+.+++.+||+.+|++|||+.|+++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~  289 (338)
T cd07859         243 YLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA  289 (338)
T ss_pred             HHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence            0   00000000   00012345788999999999999999999984

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.69  E-value=3.2e-17  Score=154.32  Aligned_cols=160  Identities=14%  Similarity=0.146  Sum_probs=98.4

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC---c----c--------------EE-EeeCC---cEEE-
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH---V----P--------------IV-ECHVG---ALIT-  211 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~---~----~--------------Lv-~c~~~---~lv~-  211 (342)
                      +|.  +.||+|+||+||++.....  .||||+++.......   .    +              +. ++...   ++|+ 
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (330)
T cd05601           2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVME   81 (330)
T ss_pred             CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEEC
Confidence            444  8999999999999998754  999999875432110   0    0              22 22222   3333 


Q ss_pred             -E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-------
Q 039505          212 -I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-------  254 (342)
Q Consensus       212 -m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-------  254 (342)
                       +                           +++||+|||+   .+|+||||||+|||++.+  .++.+++....       
T Consensus        82 ~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~  158 (330)
T cd05601          82 YQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQ---MGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMV  158 (330)
T ss_pred             CCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEcccCchHheEECCCCCEEeccCCCCeECCCCCce
Confidence             1                           8899999999   999999999999999988  44444433211       


Q ss_pred             cccccccCcceee--------------------------------cCCCCccccccccccccccccccc--ccCCCCCCh
Q 039505          255 MSTTIAGTAGFLN--------------------------------TKNPVISKSIENGNSHLRDKSTVD--LSFKGEFDI  300 (342)
Q Consensus       255 ~~~~~~Gt~~y~a--------------------------------tG~~P~~~~~~~~~~~l~~~~~~d--~~l~~~~~~  300 (342)
                      ......||+.|+|                                ||+.||.......  .+  ..+..  ..+......
T Consensus       159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~--~~--~~i~~~~~~~~~~~~~  234 (330)
T cd05601         159 NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAK--TY--NNIMNFQRFLKFPEDP  234 (330)
T ss_pred             eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHH--HH--HHHHcCCCccCCCCCC
Confidence            1122457777776                                5555554322111  00  00100  001001111


Q ss_pred             HHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          301 ISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       301 ~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      .....+.+++..|++ +|++||++.+++.
T Consensus       235 ~~~~~~~~li~~ll~-~p~~R~t~~~l~~  262 (330)
T cd05601         235 KVSSDFLDLIQSLLC-GQKERLGYEGLCC  262 (330)
T ss_pred             CCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence            234457788889997 9999999999874

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.69  E-value=4.4e-17  Score=156.60  Aligned_cols=158  Identities=20%  Similarity=0.199  Sum_probs=104.3

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc----------------EE-----EeeCC-cE-EE--E-----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP----------------IV-----ECHVG-AL-IT--I-----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~----------------Lv-----~c~~~-~l-v~--m-----  212 (342)
                      ..||+|+.|.||.+.-..+  .||||++....-. .++                ++     |-... ++ |+  |     
T Consensus       279 ~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~-~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsL  357 (550)
T KOG0578|consen  279 KKIGQGATGGVYVARKISTKQEVAIKRMDLRKQP-KKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSL  357 (550)
T ss_pred             hhhccccccceeeeeeccCCceEEEEEEEeccCC-chhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCch
Confidence            6899999999999987654  9999999876532 222                11     11111 11 11  2     


Q ss_pred             --------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------cccccccCcc
Q 039505          213 --------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIAGTAG  264 (342)
Q Consensus       213 --------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~Gt~~  264 (342)
                                          +++||+|||.   .+|||||||+.||||+.+  .|+.++++-..      ...+++||+.
T Consensus       358 TDvVt~~~~~E~qIA~Icre~l~aL~fLH~---~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~TmVGTPY  434 (550)
T KOG0578|consen  358 TDVVTKTRMTEGQIAAICREILQGLKFLHA---RGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTMVGTPY  434 (550)
T ss_pred             hhhhhcccccHHHHHHHHHHHHHHHHHHHh---cceeeeccccceeEeccCCcEEEeeeeeeeccccccCccccccCCCC
Confidence                                7899999999   999999999999999998  44444444322      3355899999


Q ss_pred             eee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccC
Q 039505          265 FLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKV  318 (342)
Q Consensus       265 y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P  318 (342)
                      |||                          -|.+||-....-.+..++ ..--.|.+.  .+......+.++..+||+.|+
T Consensus       435 WMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLI-a~ng~P~lk--~~~klS~~~kdFL~~cL~~dv  511 (550)
T KOG0578|consen  435 WMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI-ATNGTPKLK--NPEKLSPELKDFLDRCLVVDV  511 (550)
T ss_pred             ccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHH-hhcCCCCcC--CccccCHHHHHHHHHHhhcch
Confidence            999                          455555432211100111 011112221  123344567888889999999


Q ss_pred             CCCCCHHHHHH
Q 039505          319 NRRPLMNQVVM  329 (342)
Q Consensus       319 ~~RPsm~eV~~  329 (342)
                      ++||++.|+++
T Consensus       512 ~~RasA~eLL~  522 (550)
T KOG0578|consen  512 EQRASAKELLE  522 (550)
T ss_pred             hcCCCHHHHhc
Confidence            99999999875

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.69  E-value=6.5e-17  Score=150.32  Aligned_cols=117  Identities=15%  Similarity=0.140  Sum_probs=74.8

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc--------ccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM--------STTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~--------~~~~~Gt~~y~a---------------  267 (342)
                      +++||+|||+   .+|+||||||+|||++++  .++.+++.....        .....++..|+|               
T Consensus       146 i~~al~~LH~---~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di  222 (304)
T cd05101         146 VARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV  222 (304)
T ss_pred             HHHHHHHHHH---CCeeecccccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhH
Confidence            7889999999   999999999999999987  344443322111        111234566777               


Q ss_pred             -----------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhcc
Q 039505          268 -----------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       268 -----------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                                 | |..|+.......   +..  .+........+..+...+.+++.+||+.+|++||+|.|+++.|+++.
T Consensus       223 ~slG~~l~el~~~g~~p~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~  297 (304)
T cd05101         223 WSFGVLMWEIFTLGGSPYPGIPVEE---LFK--LLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRIL  297 (304)
T ss_pred             HHHHHHHHHHHcCCCCCcccCCHHH---HHH--HHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHH
Confidence                       3 455554322111   000  00000111122334566889999999999999999999999999876


Q ss_pred             CC
Q 039505          336 GS  337 (342)
Q Consensus       336 ~~  337 (342)
                      ..
T Consensus       298 ~~  299 (304)
T cd05101         298 TL  299 (304)
T ss_pred             Hh
Confidence            53

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.69  E-value=6e-17  Score=149.45  Aligned_cols=115  Identities=16%  Similarity=0.164  Sum_probs=72.6

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc--------ccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM--------STTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~--------~~~~~Gt~~y~a---------------  267 (342)
                      ++.||+|||+   .+|+||||||+|||++++  .++.+++.....        .....++..|+|               
T Consensus       141 i~~al~~LH~---~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di  217 (293)
T cd05053         141 VARGMEFLAS---KKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDV  217 (293)
T ss_pred             HHHHHHHHHH---CCccccccceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccce
Confidence            7889999999   999999999999999988  344443322110        111223455666               


Q ss_pred             -----------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhcc
Q 039505          268 -----------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       268 -----------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                                 + |..|+.......   +  .+.+........+......+.+++.+||+.+|++|||+.|+++.|+.+-
T Consensus       218 ~slG~il~el~~~g~~p~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~  292 (293)
T cd05053         218 WSFGVLLWEIFTLGGSPYPGIPVEE---L--FKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML  292 (293)
T ss_pred             eehhhHHHHHhcCCCCCCCCCCHHH---H--HHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence                       2 444443321110   0  0001111111223334566889999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.69  E-value=8.6e-17  Score=145.68  Aligned_cols=165  Identities=18%  Similarity=0.246  Sum_probs=103.9

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCCc---c-----------EE----EeeCC---cEEE--E--
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGHV---P-----------IV----ECHVG---ALIT--I--  212 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~~---~-----------Lv----~c~~~---~lv~--m--  212 (342)
                      ++|.  +.||+|+||.||+|.+.++ .||||.+.........   +           ++    ++...   ++++  +  
T Consensus         6 ~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~   85 (261)
T cd05034           6 ESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSK   85 (261)
T ss_pred             hheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCC
Confidence            3444  8999999999999998877 9999998764322110   0           22    22322   2332  1  


Q ss_pred             --------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCc--cccCCCCCccc-------c
Q 039505          213 --------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSR--ISPVEGGTHMS-------T  257 (342)
Q Consensus       213 --------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~--~~~~~~~~~~~-------~  257 (342)
                                                ++.||+|||+   .+++||||||+||+++++..  +.+++......       .
T Consensus        86 ~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~  162 (261)
T cd05034          86 GSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLES---RNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTARE  162 (261)
T ss_pred             CCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcchheEEEcCCCCEEECccccceeccchhhhhhh
Confidence                                      7889999999   89999999999999998843  33332211100       0


Q ss_pred             ccccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHH
Q 039505          258 TIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIA  310 (342)
Q Consensus       258 ~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~  310 (342)
                      ...++..|+|                          | |+.|+.......   ..+  ..........+......+.+++
T Consensus       163 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~i  237 (261)
T cd05034         163 GAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNRE---VLE--QVERGYRMPRPPNCPEELYDLM  237 (261)
T ss_pred             ccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHH--HHHcCCCCCCCCCCCHHHHHHH
Confidence            1122334554                          5 888875433221   000  0000111111222345688999


Q ss_pred             HHcccccCCCCCCHHHHHHHHHh
Q 039505          311 MASVSSKVNRRPLMNQVVMVREQ  333 (342)
Q Consensus       311 ~~Cl~~~P~~RPsm~eV~~~L~~  333 (342)
                      .+|++.+|++||++.++.+.|+.
T Consensus       238 ~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         238 LQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             HHHcccCcccCCCHHHHHHHHhc
Confidence            99999999999999999999875

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.69  E-value=7.1e-17  Score=147.13  Aligned_cols=160  Identities=18%  Similarity=0.161  Sum_probs=94.7

Q ss_pred             cccCcCCCeeEEEEEECCC----eEEEEEccCCCCCCCc-----c--------------EE-EeeCC---cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVKS----EVAMKMLSPSSSQGHV-----P--------------IV-ECHVG---ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~----~vAVK~l~~~~~~~~~-----~--------------Lv-~c~~~---~lv~--m---  212 (342)
                      +.||+|+||.||+|....+    .+|+|.+.........     +              ++ .|..+   ++++  +   
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG   80 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence            3689999999999976443    7889987644321110     1              22 33332   2222  1   


Q ss_pred             ----------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc--------
Q 039505          213 ----------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH--------  254 (342)
Q Consensus       213 ----------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~--------  254 (342)
                                                  ++.||+|||+   .+|+||||||+|||++++  .++.+++....        
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~  157 (269)
T cd05042          81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ---ADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI  157 (269)
T ss_pred             cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHh---cCEecccccHhheEecCCCcEEEeccccccccccchhee
Confidence                                        7899999999   899999999999999988  34444332211        


Q ss_pred             cccccccCcceee---------------------------------c-CCCCcccccccc-cccccc---cccccccCCC
Q 039505          255 MSTTIAGTAGFLN---------------------------------T-KNPVISKSIENG-NSHLRD---KSTVDLSFKG  296 (342)
Q Consensus       255 ~~~~~~Gt~~y~a---------------------------------t-G~~P~~~~~~~~-~~~l~~---~~~~d~~l~~  296 (342)
                      ......++..|+|                                 + |+.|+....... ....+.   ....++.+  
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--  235 (269)
T cd05042         158 TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQL--  235 (269)
T ss_pred             ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcc--
Confidence            0111233445654                                 3 555654332111 000000   11111111  


Q ss_pred             CCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHH
Q 039505          297 EFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVRE  332 (342)
Q Consensus       297 ~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~  332 (342)
                        +......+.++...|| .+|++|||+.+|++.|.
T Consensus       236 --~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         236 --DLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT  268 (269)
T ss_pred             --cccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence              2233445667888888 59999999999999874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.69  E-value=7e-17  Score=150.30  Aligned_cols=167  Identities=17%  Similarity=0.282  Sum_probs=104.6

Q ss_pred             hccC--cccCcCCCeeEEEEEEC-----C-C-eEEEEEccCCCCCCCc-----c---------------EE-EeeCC---
Q 039505          161 NNFE--RVPYKGGFITVYHGQLV-----K-S-EVAMKMLSPSSSQGHV-----P---------------IV-ECHVG---  207 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~-----~-~-~vAVK~l~~~~~~~~~-----~---------------Lv-~c~~~---  207 (342)
                      ++|.  +.||+|+||.||+|...     . . .||||+++........     +               ++ +|...   
T Consensus        35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~  114 (302)
T cd05055          35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPI  114 (302)
T ss_pred             HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCce
Confidence            3455  89999999999999752     1 2 7999998754321110     1               22 33332   


Q ss_pred             cEEE--E----------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCcc
Q 039505          208 ALIT--I----------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHM  255 (342)
Q Consensus       208 ~lv~--m----------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~~  255 (342)
                      ++++  +                            ++.||+|||+   .+|+|+||||+|||++++.  ++.+++.....
T Consensus       115 ~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~  191 (302)
T cd05055         115 LVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNVLLTHGKIVKICDFGLARDI  191 (302)
T ss_pred             EEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeehhhhccceEEEcCCCeEEECCCcccccc
Confidence            3333  1                            8899999999   8999999999999999873  34443322111


Q ss_pred             --------ccccccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCCh
Q 039505          256 --------STTIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDI  300 (342)
Q Consensus       256 --------~~~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~  300 (342)
                              .....++..|+|                          | |+.|+.......  .+  .+.++.......+.
T Consensus       192 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~--~~--~~~~~~~~~~~~~~  267 (302)
T cd05055         192 MNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS--KF--YKLIKEGYRMAQPE  267 (302)
T ss_pred             cCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH--HH--HHHHHcCCcCCCCC
Confidence                    111234556766                          5 777765433221  00  01111111111122


Q ss_pred             HHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhc
Q 039505          301 ISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQG  334 (342)
Q Consensus       301 ~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i  334 (342)
                      ....++.+++.+|++.+|++|||+.|+++.|++.
T Consensus       268 ~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         268 HAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence            2345688999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.69  E-value=7.3e-17  Score=153.49  Aligned_cols=169  Identities=15%  Similarity=0.138  Sum_probs=105.8

Q ss_pred             HhhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc------c--------------EE-Eee-CC-----
Q 039505          159 VTNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV------P--------------IV-ECH-VG-----  207 (342)
Q Consensus       159 at~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~------~--------------Lv-~c~-~~-----  207 (342)
                      ..++|.  +.||+|+||.||++.....  .||||++.........      +              ++ ++. ..     
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   94 (355)
T cd07874          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF   94 (355)
T ss_pred             hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence            345666  8999999999999987654  9999998754322111      1              22 221 11     


Q ss_pred             ---cEEE--E-----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc--
Q 039505          208 ---ALIT--I-----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM--  255 (342)
Q Consensus       208 ---~lv~--m-----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~--  255 (342)
                         ++++  +                       +++||+|||+   .+|+||||||+|||++.+  .++.+++.....  
T Consensus        95 ~~~~lv~e~~~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~  171 (355)
T cd07874          95 QDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT  171 (355)
T ss_pred             ceeEEEhhhhcccHHHHHhhcCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEECCCCCEEEeeCcccccCCC
Confidence               2232  1                       8899999999   999999999999999988  444444433211  


Q ss_pred             ---ccccccCcceee--------------------------cCCCCcccccccc-cccccc-----------------cc
Q 039505          256 ---STTIAGTAGFLN--------------------------TKNPVISKSIENG-NSHLRD-----------------KS  288 (342)
Q Consensus       256 ---~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~-~~~l~~-----------------~~  288 (342)
                         .....||..|+|                          ||+.||....... ....+.                 ..
T Consensus       172 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (355)
T cd07874         172 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN  251 (355)
T ss_pred             ccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHH
Confidence               123568888888                          8888886432110 000000                 00


Q ss_pred             ccc----------ccC------C--CCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHH
Q 039505          289 TVD----------LSF------K--GEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMV  330 (342)
Q Consensus       289 ~~d----------~~l------~--~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~  330 (342)
                      .++          +..      .  ..........+.+++.+|++.+|++|||+.|+++.
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h  311 (355)
T cd07874         252 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH  311 (355)
T ss_pred             HHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence            000          000      0  00111123457899999999999999999999864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.69  E-value=1e-16  Score=146.66  Aligned_cols=168  Identities=15%  Similarity=0.158  Sum_probs=102.6

Q ss_pred             cccCcCCCeeEEEEEEC-----CC-eEEEEEccCCCCC-CCcc------------------EE-EeeC--C---cEEE--
Q 039505          165 RVPYKGGFITVYHGQLV-----KS-EVAMKMLSPSSSQ-GHVP------------------IV-ECHV--G---ALIT--  211 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~-----~~-~vAVK~l~~~~~~-~~~~------------------Lv-~c~~--~---~lv~--  211 (342)
                      +.||+|+||.||+|.+.     .+ .+|||.++..... ....                  ++ +|..  +   .+++  
T Consensus        10 ~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~   89 (284)
T cd05038          10 KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEY   89 (284)
T ss_pred             eeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEEec
Confidence            78999999999999864     13 8999999765442 0111                  22 4433  1   3333  


Q ss_pred             E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCccc------
Q 039505          212 I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHMS------  256 (342)
Q Consensus       212 m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~~~------  256 (342)
                      +                           ++.||+|||+   .+++||||||+||+++.+.  ++.+++......      
T Consensus        90 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~  166 (284)
T cd05038          90 LPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGS---QRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYY  166 (284)
T ss_pred             CCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEcccccccccccCCcce
Confidence            1                           8899999999   8999999999999999883  333322211100      


Q ss_pred             ---cccccCcceee--------------------------cCCCCcccccccccc--------cccc--cccccccCCCC
Q 039505          257 ---TTIAGTAGFLN--------------------------TKNPVISKSIENGNS--------HLRD--KSTVDLSFKGE  297 (342)
Q Consensus       257 ---~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~--------~l~~--~~~~d~~l~~~  297 (342)
                         ....++..|++                          ||+.|+.........        ....  .+.+.......
T Consensus       167 ~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (284)
T cd05038         167 YVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLP  246 (284)
T ss_pred             eccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCCcCC
Confidence               00112223333                          777776543221100        0000  01111111111


Q ss_pred             CChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhcc
Q 039505          298 FDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       298 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                      .+..+..++.+++.+||+.+|++||||.||+++|+.+.
T Consensus       247 ~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i~  284 (284)
T cd05038         247 RPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRLR  284 (284)
T ss_pred             CCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhcC
Confidence            12334467889999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.69  E-value=7.2e-17  Score=167.36  Aligned_cols=164  Identities=20%  Similarity=0.159  Sum_probs=104.6

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-------c--------------EE-EeeCC---cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-------P--------------IV-ECHVG---ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-------~--------------Lv-~c~~~---~lv~--m---  212 (342)
                      ++||+|+||.||+|....+  .||||++.........       +              +. +|..+   ++++  +   
T Consensus         8 ~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY~eGG   87 (932)
T PRK13184          8 RLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIEGY   87 (932)
T ss_pred             EEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEcCCCC
Confidence            8999999999999998754  9999998754322110       0              22 33222   1221  0   


Q ss_pred             ----------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc-
Q 039505          213 ----------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM-  255 (342)
Q Consensus       213 ----------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~-  255 (342)
                                                        +++||+|||+   .+|+||||||+|||++.+  .++.+++..... 
T Consensus        88 SL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs---~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~  164 (932)
T PRK13184         88 TLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHS---KGVLHRDLKPDNILLGLFGEVVILDWGAAIFKK  164 (932)
T ss_pred             CHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHH---CCccccCCchheEEEcCCCCEEEEecCcceecc
Confidence                                              7789999999   899999999999999987  333333221110 


Q ss_pred             -----------------------ccccccCcceee--------------------------cCCCCcccccccccccccc
Q 039505          256 -----------------------STTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRD  286 (342)
Q Consensus       256 -----------------------~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~  286 (342)
                                             .....||+.|+|                          ||+.|+.......  ....
T Consensus       165 ~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k--i~~~  242 (932)
T PRK13184        165 LEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK--ISYR  242 (932)
T ss_pred             cccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh--hhhh
Confidence                                   112469999998                          8999987533221  0000


Q ss_pred             cccccccCCCCCChHHHHHHHHHHHHcccccCCCCC-CHHHHHHHHHhc
Q 039505          287 KSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRP-LMNQVVMVREQG  334 (342)
Q Consensus       287 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-sm~eV~~~L~~i  334 (342)
                      ....++.-.. ...+.+..+.+++.+|++.+|++|| ++.++.+.|+..
T Consensus       243 ~~i~~P~~~~-p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~  290 (932)
T PRK13184        243 DVILSPIEVA-PYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPH  290 (932)
T ss_pred             hhccChhhcc-ccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            1111111100 0112345578899999999999996 577787777765

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.69  E-value=4.9e-17  Score=150.03  Aligned_cols=160  Identities=24%  Similarity=0.257  Sum_probs=101.2

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-------c-----------E---E-EeeCC---cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-------P-----------I---V-ECHVG---ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-------~-----------L---v-~c~~~---~lv~--m---  212 (342)
                      ++||+|+||+||++....+  .||||.+.........       +           +   . .+...   ++++  +   
T Consensus         6 ~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~   85 (285)
T cd05630           6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGG   85 (285)
T ss_pred             EEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecCCC
Confidence            7899999999999998755  9999998654221111       1           1   1 22222   2332  1   


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc-----cccccc
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH-----MSTTIA  260 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~-----~~~~~~  260 (342)
                                               ++.||.|||+   .+|+||||||+||+++++.  ++.+++....     ......
T Consensus        86 ~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~  162 (285)
T cd05630          86 DLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQ---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV  162 (285)
T ss_pred             cHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccCCC
Confidence                                     7899999999   9999999999999999873  3444332211     112246


Q ss_pred             cCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcc
Q 039505          261 GTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASV  314 (342)
Q Consensus       261 Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl  314 (342)
                      |+..|+|                          +|+.||............ ....+ .............+.+++..||
T Consensus       163 g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~li~~~l  240 (285)
T cd05630         163 GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV-ERLVK-EVQEEYSEKFSPDARSLCKMLL  240 (285)
T ss_pred             CCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHH-Hhhhh-hhhhhcCccCCHHHHHHHHHHh
Confidence            7888887                          788888753221100000 00111 0111112223445788999999


Q ss_pred             cccCCCCCC-----HHHHHH
Q 039505          315 SSKVNRRPL-----MNQVVM  329 (342)
Q Consensus       315 ~~~P~~RPs-----m~eV~~  329 (342)
                      +.+|++|||     +.|+++
T Consensus       241 ~~~p~~R~s~~~~~~~~~~~  260 (285)
T cd05630         241 CKDPKERLGCQGGGAREVKE  260 (285)
T ss_pred             hcCHHHccCCCCCchHHHHc
Confidence            999999999     788875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.69  E-value=3.6e-17  Score=155.12  Aligned_cols=159  Identities=18%  Similarity=0.187  Sum_probs=102.6

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC---eEEEEEccCCCCCC--C-----cc--------------EE-EeeCC---cEEE
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS---EVAMKMLSPSSSQG--H-----VP--------------IV-ECHVG---ALIT  211 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~---~vAVK~l~~~~~~~--~-----~~--------------Lv-~c~~~---~lv~  211 (342)
                      +|.  +.||+|+||.||+|.+...   .||+|++.......  .     .+              +. ++..+   ++++
T Consensus        31 ~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~  110 (340)
T PTZ00426         31 DFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVL  110 (340)
T ss_pred             hcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEEE
Confidence            354  8999999999999986543   79999986432110  0     01              23 33333   3333


Q ss_pred             --E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc---cccc
Q 039505          212 --I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH---MSTT  258 (342)
Q Consensus       212 --m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~---~~~~  258 (342)
                        +                          ++.||+|||+   .+|+||||||+|||++.+  .++.+++....   ....
T Consensus       111 Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~~~  187 (340)
T PTZ00426        111 EFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQS---LNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRTYT  187 (340)
T ss_pred             eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEecCCCCeecCCCcce
Confidence              1                          8899999999   999999999999999987  44444443321   1233


Q ss_pred             cccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHH
Q 039505          259 IAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMA  312 (342)
Q Consensus       259 ~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~  312 (342)
                      ..||+.|+|                          ||+.||.......   +. ..+.....  ..+......+.+++.+
T Consensus       188 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~---~~-~~i~~~~~--~~p~~~~~~~~~li~~  261 (340)
T PTZ00426        188 LCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLL---IY-QKILEGII--YFPKFLDNNCKHLMKK  261 (340)
T ss_pred             ecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHH---HH-HHHhcCCC--CCCCCCCHHHHHHHHH
Confidence            578999998                          8888887543211   00 11111111  1112223447789999


Q ss_pred             cccccCCCCC-----CHHHHHH
Q 039505          313 SVSSKVNRRP-----LMNQVVM  329 (342)
Q Consensus       313 Cl~~~P~~RP-----sm~eV~~  329 (342)
                      |++.+|++|+     ++.++.+
T Consensus       262 ~l~~dp~~R~~~~~~~~~~~~~  283 (340)
T PTZ00426        262 LLSHDLTKRYGNLKKGAQNVKE  283 (340)
T ss_pred             HcccCHHHcCCCCCCCHHHHHc
Confidence            9999999995     7888764

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.69  E-value=1.7e-16  Score=144.93  Aligned_cols=112  Identities=12%  Similarity=0.112  Sum_probs=66.5

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc--------cccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH--------MSTTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~--------~~~~~~Gt~~y~a---------------  267 (342)
                      +++||+|||+   .+++||||||+|||++.+  .++.+++....        ......|+..|+|               
T Consensus       108 i~~al~~lH~---~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~  184 (268)
T cd05086         108 IAAGVTHMHK---HNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAE  184 (268)
T ss_pred             HHHHHHHHHH---CCeeccCCccceEEEcCCccEEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCC
Confidence            8889999999   899999999999999987  44444432211        1112345556655               


Q ss_pred             -------------------cCCCCcccccccc-cccccc---cccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCH
Q 039505          268 -------------------TKNPVISKSIENG-NSHLRD---KSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLM  324 (342)
Q Consensus       268 -------------------tG~~P~~~~~~~~-~~~l~~---~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm  324 (342)
                                         .|..|+....... ...+..   ....++.+...    ....+.+++..|| .+|++||++
T Consensus       185 ~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~c~-~~P~~Rp~~  259 (268)
T cd05086         185 QTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELP----YSERWYEVLQFCW-LSPEKRATA  259 (268)
T ss_pred             CCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCC----CcHHHHHHHHHHh-hCcccCCCH
Confidence                               1333443221110 000000   11222222222    2344677888899 579999999


Q ss_pred             HHHHHHHH
Q 039505          325 NQVVMVRE  332 (342)
Q Consensus       325 ~eV~~~L~  332 (342)
                      .+|++.|.
T Consensus       260 ~~i~~~l~  267 (268)
T cd05086         260 EEVHRLLT  267 (268)
T ss_pred             HHHHHHhc
Confidence            99998874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.69  E-value=4e-17  Score=150.52  Aligned_cols=160  Identities=24%  Similarity=0.246  Sum_probs=100.9

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC-------cc-----------EE----EeeCC---cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH-------VP-----------IV----ECHVG---ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~-------~~-----------Lv----~c~~~---~lv~--m---  212 (342)
                      ++||+|+||+||++....+  .||||++........       .+           ++    .+..+   ++++  +   
T Consensus         6 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~   85 (285)
T cd05605           6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGG   85 (285)
T ss_pred             EEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccCCC
Confidence            7899999999999998644  999999865321110       01           22    22222   2333  1   


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-----cccccc
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-----MSTTIA  260 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-----~~~~~~  260 (342)
                                               ++.||.|||+   .+|+||||||+||+++++  .++.+++....     ......
T Consensus        86 ~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~  162 (285)
T cd05605          86 DLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHR---ERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRGRV  162 (285)
T ss_pred             cHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCcccccc
Confidence                                     8899999999   899999999999999987  34444332211     112246


Q ss_pred             cCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcc
Q 039505          261 GTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASV  314 (342)
Q Consensus       261 Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl  314 (342)
                      |++.|+|                          +|+.||...........+... +.. .....+......+.+++..||
T Consensus       163 ~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~li~~~l  240 (285)
T cd05605         163 GTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERR-VKE-DQEEYSEKFSEAARSICRQLL  240 (285)
T ss_pred             CCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHH-hhh-cccccCcccCHHHHHHHHHHc
Confidence            7888887                          788888754321100000000 110 111122334456889999999


Q ss_pred             cccCCCCC-----CHHHHHH
Q 039505          315 SSKVNRRP-----LMNQVVM  329 (342)
Q Consensus       315 ~~~P~~RP-----sm~eV~~  329 (342)
                      +.||++||     ++.++++
T Consensus       241 ~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05605         241 TKDPGFRLGCRGEGAEEVKA  260 (285)
T ss_pred             cCCHHHhcCCCCCCHHHHhc
Confidence            99999999     7778754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.69  E-value=7.6e-17  Score=148.30  Aligned_cols=162  Identities=17%  Similarity=0.213  Sum_probs=100.2

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC------cc-----------------EE-EeeC-----C---cEE
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH------VP-----------------IV-ECHV-----G---ALI  210 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~------~~-----------------Lv-~c~~-----~---~lv  210 (342)
                      +.||+|+||+||+|....+  .||+|.++.......      .+                 ++ ++..     .   .++
T Consensus         6 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv   85 (288)
T cd07863           6 AEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTLV   85 (288)
T ss_pred             eEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEEE
Confidence            7899999999999998755  899999875432211      01                 22 2221     1   233


Q ss_pred             E--E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc-----
Q 039505          211 T--I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH-----  254 (342)
Q Consensus       211 ~--m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~-----  254 (342)
                      +  +                           ++.||+|||+   .+|+||||||+|||++++.  ++.+++....     
T Consensus        86 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~  162 (288)
T cd07863          86 FEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQM  162 (288)
T ss_pred             EcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECccCccccccCcc
Confidence            2  1                           8899999999   8999999999999999883  4444333211     


Q ss_pred             cccccccCcceee--------------------------cCCCCcccccccc-cccccc-----------------cccc
Q 039505          255 MSTTIAGTAGFLN--------------------------TKNPVISKSIENG-NSHLRD-----------------KSTV  290 (342)
Q Consensus       255 ~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~-~~~l~~-----------------~~~~  290 (342)
                      ......||..|+|                          +|++|+....... ...+..                 ....
T Consensus       163 ~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (288)
T cd07863         163 ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAF  242 (288)
T ss_pred             cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccccccccccc
Confidence            1123457788887                          7777775432211 000000                 0000


Q ss_pred             cccCCC---CCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          291 DLSFKG---EFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       291 d~~l~~---~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      .+....   .........+.+++.+|++.||++|||+.|++.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~  284 (288)
T cd07863         243 SPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ  284 (288)
T ss_pred             CCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            000000   001123345789999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.69  E-value=3.5e-17  Score=153.33  Aligned_cols=153  Identities=19%  Similarity=0.200  Sum_probs=96.5

Q ss_pred             cccCcCCCeeEEEEEEC----CC-eEEEEEccCCCCCCC------cc--------------EE-EeeCC---cEEE--E-
Q 039505          165 RVPYKGGFITVYHGQLV----KS-EVAMKMLSPSSSQGH------VP--------------IV-ECHVG---ALIT--I-  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~----~~-~vAVK~l~~~~~~~~------~~--------------Lv-~c~~~---~lv~--m-  212 (342)
                      +.||+|+||.||+++..    .+ .||+|++........      .+              +. ++..+   ++|+  + 
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            57999999999998752    33 899999875321110      01              22 22222   3333  1 


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------ccccc
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTI  259 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~  259 (342)
                                               +++||+|||+   .+|+||||||+|||++++  .++.+++....      .....
T Consensus        82 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~  158 (318)
T cd05582          82 GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF  158 (318)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecc
Confidence                                     8999999999   999999999999999988  44444432211      12235


Q ss_pred             ccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHc
Q 039505          260 AGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMAS  313 (342)
Q Consensus       260 ~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~C  313 (342)
                      .||+.|+|                          ||+.|+.......   .. ..+.....  ..+......+.+++.+|
T Consensus       159 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~---~~-~~i~~~~~--~~p~~~~~~~~~li~~~  232 (318)
T cd05582         159 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKE---TM-TMILKAKL--GMPQFLSPEAQSLLRAL  232 (318)
T ss_pred             cCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHH---HH-HHHHcCCC--CCCCCCCHHHHHHHHHH
Confidence            68888887                          7777776433211   00 00111011  11222334578899999


Q ss_pred             ccccCCCCCCHHH
Q 039505          314 VSSKVNRRPLMNQ  326 (342)
Q Consensus       314 l~~~P~~RPsm~e  326 (342)
                      |+.+|++||++.+
T Consensus       233 l~~~P~~R~~a~~  245 (318)
T cd05582         233 FKRNPANRLGAGP  245 (318)
T ss_pred             hhcCHhHcCCCCC
Confidence            9999999999544

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.69  E-value=1.1e-16  Score=145.53  Aligned_cols=162  Identities=16%  Similarity=0.223  Sum_probs=100.0

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc----c-----------EE----EeeCC---cEEE--E------
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV----P-----------IV----ECHVG---ALIT--I------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~----~-----------Lv----~c~~~---~lv~--m------  212 (342)
                      +.||+|+||.||+|....+  .||+|++.........    +           ++    ++..+   ++++  +      
T Consensus        15 ~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L~   94 (267)
T cd06646          15 QRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQ   94 (267)
T ss_pred             heeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCCCCcHH
Confidence            8999999999999998644  8999998754322111    1           22    22222   2332  1      


Q ss_pred             --------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCcc------ccccccCcc
Q 039505          213 --------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHM------STTIAGTAG  264 (342)
Q Consensus       213 --------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~~------~~~~~Gt~~  264 (342)
                                          +++||+|||+   .+|+||||||+||+++++.  ++.+++.....      .....|+..
T Consensus        95 ~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  171 (267)
T cd06646          95 DIYHVTGPLSELQIAYVCRETLQGLAYLHS---KGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSFIGTPY  171 (267)
T ss_pred             HHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEECcCccceeecccccccCccccCcc
Confidence                                8899999999   9999999999999999873  33333322110      112346666


Q ss_pred             eee-----------------------------cCCCCcccccccc-cccccccccccccCCCCCChHHHHHHHHHHHHcc
Q 039505          265 FLN-----------------------------TKNPVISKSIENG-NSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASV  314 (342)
Q Consensus       265 y~a-----------------------------tG~~P~~~~~~~~-~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl  314 (342)
                      |+|                             ||+.|+....... ...+.......+....  .......+.+++.+||
T Consensus       172 y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l  249 (267)
T cd06646         172 WMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKD--KTKWSSTFHNFVKISL  249 (267)
T ss_pred             ccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCcc--ccccCHHHHHHHHHHh
Confidence            665                             6777764332111 0000001111111111  1123456889999999


Q ss_pred             cccCCCCCCHHHHHHHH
Q 039505          315 SSKVNRRPLMNQVVMVR  331 (342)
Q Consensus       315 ~~~P~~RPsm~eV~~~L  331 (342)
                      +.+|++||++.++++.|
T Consensus       250 ~~~P~~Rp~~~~il~~l  266 (267)
T cd06646         250 TKNPKKRPTAERLLTHL  266 (267)
T ss_pred             hCChhhCcCHHHHhcCC
Confidence            99999999999998643

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.69  E-value=1e-16  Score=148.69  Aligned_cols=159  Identities=19%  Similarity=0.189  Sum_probs=103.8

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc------------------EE-EeeCC---cEEE--E------
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP------------------IV-ECHVG---ALIT--I------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~------------------Lv-~c~~~---~lv~--m------  212 (342)
                      +.||+|+||.||+|.....  .||+|.+..........                  ++ ++..+   ++|+  +      
T Consensus        26 ~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~  105 (296)
T cd06654          26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT  105 (296)
T ss_pred             EEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccCCCCHH
Confidence            7899999999999997544  99999987644322111                  22 33322   4444  2      


Q ss_pred             -------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------cccccccCcce
Q 039505          213 -------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIAGTAGF  265 (342)
Q Consensus       213 -------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~Gt~~y  265 (342)
                                         ++.||+|||+   .+|+||||||+|||++.+  .++.+++....      ......|++.|
T Consensus       106 ~~~~~~~~~~~~~~~i~~ql~~aL~~LH~---~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y  182 (296)
T cd06654         106 DVVTETCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYW  182 (296)
T ss_pred             HHHHhcCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCEEECccccchhccccccccCcccCCccc
Confidence                               8899999999   999999999999999987  44444432211      11224677778


Q ss_pred             ee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCC
Q 039505          266 LN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVN  319 (342)
Q Consensus       266 ~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~  319 (342)
                      +|                          ||+.||.......  .+.. ...........+......+.+++.+||+.+|+
T Consensus       183 ~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~  259 (296)
T cd06654         183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR--ALYL-IATNGTPELQNPEKLSAIFRDFLNRCLDMDVE  259 (296)
T ss_pred             cCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH--hHHH-HhcCCCCCCCCccccCHHHHHHHHHHCcCCcc
Confidence            77                          8898886543221  1111 00111111111223345588899999999999


Q ss_pred             CCCCHHHHHH
Q 039505          320 RRPLMNQVVM  329 (342)
Q Consensus       320 ~RPsm~eV~~  329 (342)
                      +||++.++++
T Consensus       260 ~Rpt~~eil~  269 (296)
T cd06654         260 KRGSAKELLQ  269 (296)
T ss_pred             cCcCHHHHhh
Confidence            9999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.69  E-value=4.4e-17  Score=155.69  Aligned_cols=79  Identities=29%  Similarity=0.378  Sum_probs=58.1

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC-------cc--------------EE-EeeCC---cEEE-
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH-------VP--------------IV-ECHVG---ALIT-  211 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~-------~~--------------Lv-~c~~~---~lv~-  211 (342)
                      +|.  +.||+|+||+||+|....+  .||||+++.......       .+              +. .+.+.   ++|+ 
T Consensus         2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E   81 (363)
T cd05628           2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIME   81 (363)
T ss_pred             CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEc
Confidence            455  8999999999999998754  999999865321100       00              22 22222   3333 


Q ss_pred             -E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC
Q 039505          212 -I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK  243 (342)
Q Consensus       212 -m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~  243 (342)
                       +                          ++.||+|||+   .+|+||||||+|||++.+
T Consensus        82 ~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~---~givHrDlKp~NILi~~~  137 (363)
T cd05628          82 FLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQ---LGFIHRDIKPDNLLLDSK  137 (363)
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCC
Confidence             1                          8899999999   999999999999999988

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.69  E-value=6.1e-17  Score=154.33  Aligned_cols=167  Identities=17%  Similarity=0.174  Sum_probs=104.4

Q ss_pred             hhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC--c----c-----------EE----EeeCC-------
Q 039505          160 TNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH--V----P-----------IV----ECHVG-------  207 (342)
Q Consensus       160 t~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~--~----~-----------Lv----~c~~~-------  207 (342)
                      .++|.  +.||+|+||.||++....+  .||||++........  .    +           ++    ++...       
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~   99 (359)
T cd07876          20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ   99 (359)
T ss_pred             hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence            35565  8999999999999998654  999999865421111  0    1           22    22111       


Q ss_pred             --cEEE--E-----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc----
Q 039505          208 --ALIT--I-----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH----  254 (342)
Q Consensus       208 --~lv~--m-----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~----  254 (342)
                        ++++  +                       +++||+|||+   .+|+||||||+|||++.+  .++.+++....    
T Consensus       100 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~  176 (359)
T cd07876         100 DVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN  176 (359)
T ss_pred             eeEEEEeCCCcCHHHHHhccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEecCCCccccccC
Confidence              2332  1                       8999999999   999999999999999988  44444443221    


Q ss_pred             -cccccccCcceee--------------------------cCCCCcccccccc-cccccc-----------------ccc
Q 039505          255 -MSTTIAGTAGFLN--------------------------TKNPVISKSIENG-NSHLRD-----------------KST  289 (342)
Q Consensus       255 -~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~-~~~l~~-----------------~~~  289 (342)
                       ......||+.|+|                          ||+.||....... ...+..                 ...
T Consensus       177 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (359)
T cd07876         177 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNY  256 (359)
T ss_pred             ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence             1123567888888                          8888886542110 000000                 000


Q ss_pred             c--cccCCC----------------CCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          290 V--DLSFKG----------------EFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       290 ~--d~~l~~----------------~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      .  .+...+                .........+.+++.+|++.+|++|||+.|+++
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  314 (359)
T cd07876         257 VENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALR  314 (359)
T ss_pred             HhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhc
Confidence            0  000000                001112345789999999999999999999986

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.69  E-value=1.1e-16  Score=146.71  Aligned_cols=166  Identities=17%  Similarity=0.207  Sum_probs=105.5

Q ss_pred             cccCcCCCeeEEEEEECCC------eEEEEEccCCCCCCCc-----c--------------EE-EeeCC--cEEE--E--
Q 039505          165 RVPYKGGFITVYHGQLVKS------EVAMKMLSPSSSQGHV-----P--------------IV-ECHVG--ALIT--I--  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~------~vAVK~l~~~~~~~~~-----~--------------Lv-~c~~~--~lv~--m--  212 (342)
                      +.||+|+||+||+|.+...      .+|+|.+.........     +              ++ +|...  .+++  +  
T Consensus        13 ~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~   92 (279)
T cd05057          13 KVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLSSQVQLITQLMPL   92 (279)
T ss_pred             ceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCceEEEEecCCC
Confidence            7899999999999987532      5899988765432111     1              33 44433  3333  1  


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCccc--------c
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHMS--------T  257 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~~--------~  257 (342)
                                               +++||+|||+   .+++||||||+||+++++  .++.+++......        .
T Consensus        93 g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~  169 (279)
T cd05057          93 GCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEE---KRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAE  169 (279)
T ss_pred             CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCEEecccCcceEEEcCCCeEEECCCcccccccCcccceecC
Confidence                                     8999999999   999999999999999887  3444433221110        0


Q ss_pred             ccccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHH
Q 039505          258 TIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIA  310 (342)
Q Consensus       258 ~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~  310 (342)
                      ...++..|++                          | |+.|++......   +.+ .+... .....+..+...+.+++
T Consensus       170 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~-~~~~~-~~~~~~~~~~~~~~~~~  244 (279)
T cd05057         170 GGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE---IPD-LLEKG-ERLPQPPICTIDVYMVL  244 (279)
T ss_pred             CCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH---HHH-HHhCC-CCCCCCCCCCHHHHHHH
Confidence            1112344555                          5 788876543221   111 01110 00111222345688899


Q ss_pred             HHcccccCCCCCCHHHHHHHHHhccCCC
Q 039505          311 MASVSSKVNRRPLMNQVVMVREQGNGSR  338 (342)
Q Consensus       311 ~~Cl~~~P~~RPsm~eV~~~L~~i~~~~  338 (342)
                      .+||..+|.+||++.++++.|+.+....
T Consensus       245 ~~~l~~~p~~Rp~~~~l~~~l~~~~~~~  272 (279)
T cd05057         245 VKCWMIDAESRPTFKELINEFSKMARDP  272 (279)
T ss_pred             HHHcCCChhhCCCHHHHHHHHHHHHhCC
Confidence            9999999999999999999999875543

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.69  E-value=1.4e-17  Score=145.53  Aligned_cols=167  Identities=18%  Similarity=0.173  Sum_probs=111.7

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc------------------EE-------------------Eee
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP------------------IV-------------------ECH  205 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~------------------Lv-------------------~c~  205 (342)
                      +.||+|||+.||.++.-.+  .+|+|++.....++.+.                  ++                   |..
T Consensus        27 ~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~  106 (302)
T KOG2345|consen   27 RLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYYK  106 (302)
T ss_pred             eeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeehhc
Confidence            8999999999999985444  99999998766333322                  11                   222


Q ss_pred             CC-cEEE---E------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCccc-----
Q 039505          206 VG-ALIT---I------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHMS-----  256 (342)
Q Consensus       206 ~~-~lv~---m------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~~-----  256 (342)
                      .+ ++.+   +                  +++||++||+ ..++.+||||||.|||+.++  ..+++++..+...     
T Consensus       107 ~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~-~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~  185 (302)
T KOG2345|consen  107 RGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHE-KEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEG  185 (302)
T ss_pred             cccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhc-cCCcccccCCCcceeEecCCCceEEEeccCccccceEeec
Confidence            22 1100   0                  9999999998 33579999999999999996  4444444332211     


Q ss_pred             ----------cccccCcceee-----------------------------cCCCCcccccccccccccccccccccCCCC
Q 039505          257 ----------TTIAGTAGFLN-----------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGE  297 (342)
Q Consensus       257 ----------~~~~Gt~~y~a-----------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~  297 (342)
                                ....-|..|.|                             .|..||+...+..  .-+...+..+.+.-+
T Consensus       186 ~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~G--gSlaLAv~n~q~s~P  263 (302)
T KOG2345|consen  186 SRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQG--GSLALAVQNAQISIP  263 (302)
T ss_pred             hHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcC--CeEEEeeeccccccC
Confidence                      11235666766                             6788887654432  112233334333322


Q ss_pred             CChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhc
Q 039505          298 FDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQG  334 (342)
Q Consensus       298 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i  334 (342)
                      ......+.+.+++.+|++.||.+||++.+++..++.+
T Consensus       264 ~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L  300 (302)
T KOG2345|consen  264 NSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL  300 (302)
T ss_pred             CCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence            2333567799999999999999999999999988765

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.69  E-value=3.9e-17  Score=155.81  Aligned_cols=79  Identities=29%  Similarity=0.344  Sum_probs=58.2

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC-------cc--------------EE-EeeCC---cEEE-
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH-------VP--------------IV-ECHVG---ALIT-  211 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~-------~~--------------Lv-~c~~~---~lv~-  211 (342)
                      +|.  +.||+|+||+||+|+...+  .||||++........       .+              +. ++..+   ++|+ 
T Consensus         2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E   81 (364)
T cd05599           2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIME   81 (364)
T ss_pred             CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEEC
Confidence            455  8999999999999998754  999999975321000       01              22 22222   3332 


Q ss_pred             -E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC
Q 039505          212 -I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK  243 (342)
Q Consensus       212 -m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~  243 (342)
                       +                          ++.||+|||+   .+|+||||||+|||++.+
T Consensus        82 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~  137 (364)
T cd05599          82 YLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHK---LGYIHRDIKPDNLLLDAK  137 (364)
T ss_pred             CCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCC
Confidence             1                          8899999999   999999999999999988

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.68  E-value=6.5e-17  Score=154.00  Aligned_cols=160  Identities=19%  Similarity=0.224  Sum_probs=111.6

Q ss_pred             hccC-cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc-----------------EE----EeeCC---cEEE--
Q 039505          161 NNFE-RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP-----------------IV----ECHVG---ALIT--  211 (342)
Q Consensus       161 ~~f~-~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~-----------------Lv----~c~~~---~lv~--  211 (342)
                      .-|. ++||+|.||+||-|.++.+  .||||++.+..-...++                 ++    .|...   +.|+  
T Consensus       565 Qif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEK  644 (888)
T KOG4236|consen  565 QIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEK  644 (888)
T ss_pred             HhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehh
Confidence            4455 8999999999999998765  99999998764333322                 33    22222   3333  


Q ss_pred             E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-----CccccCCCCCc-----
Q 039505          212 I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-----SRISPVEGGTH-----  254 (342)
Q Consensus       212 m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-----a~~~~~~~~~~-----  254 (342)
                      |                           |+.||.|||.   ++|+|+||||+||||.+.     .|++++++..-     
T Consensus       645 l~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~---knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks  721 (888)
T KOG4236|consen  645 LHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHF---KNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS  721 (888)
T ss_pred             hcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhh---cceeeccCCchheeeccCCCCCceeeccccceeecchhh
Confidence            2                           8889999999   999999999999999987     56777666532     


Q ss_pred             cccccccCcceee--------------------------cCCCCcccccccccccccc-cccccccCCCCCChHHHHHHH
Q 039505          255 MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRD-KSTVDLSFKGEFDIISVGKAV  307 (342)
Q Consensus       255 ~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~l~~~~~~~~~~~l~  307 (342)
                      ....++||+.|+|                          +|..||..+.+-.  +-++ ...+-|   .....+.....+
T Consensus       722 FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIn--dQIQNAaFMyP---p~PW~eis~~Ai  796 (888)
T KOG4236|consen  722 FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDIN--DQIQNAAFMYP---PNPWSEISPEAI  796 (888)
T ss_pred             hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchh--HHhhccccccC---CCchhhcCHHHH
Confidence            2345899999999                          8899988754322  1111 222222   222334445578


Q ss_pred             HHHHHcccccCCCCCCHHHHH
Q 039505          308 EIAMASVSSKVNRRPLMNQVV  328 (342)
Q Consensus       308 ~l~~~Cl~~~P~~RPsm~eV~  328 (342)
                      +++...++..-++|.|..+.+
T Consensus       797 dlIn~LLqVkm~kRysvdk~l  817 (888)
T KOG4236|consen  797 DLINNLLQVKMRKRYSVDKSL  817 (888)
T ss_pred             HHHHHHHHHHHHHhcchHhhc
Confidence            888888898889999887654

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.68  E-value=2.7e-17  Score=154.29  Aligned_cols=152  Identities=18%  Similarity=0.209  Sum_probs=97.0

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC---cc-------------------EE-EeeCC---cEEE--E--
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH---VP-------------------IV-ECHVG---ALIT--I--  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~---~~-------------------Lv-~c~~~---~lv~--m--  212 (342)
                      ++||+|+||.||+|+....  .||+|++........   ..                   +. .+...   ++|+  +  
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            4799999999999998754  899999864321100   00                   22 22222   3333  1  


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------cccccc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIA  260 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~  260 (342)
                                              +++||+|||+   .+|+||||||+|||++.+  .++.+++....      ......
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  157 (321)
T cd05603          81 GELFFHLQRERCFLEPRARFYAAEVASAIGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFC  157 (321)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCcccccc
Confidence                                    8999999999   999999999999999988  44444432211      122356


Q ss_pred             cCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcc
Q 039505          261 GTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASV  314 (342)
Q Consensus       261 Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl  314 (342)
                      ||+.|+|                          ||+.||.......   +. ..+....+  ..+......+.+++.+|+
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~-~~i~~~~~--~~~~~~~~~~~~li~~~l  231 (321)
T cd05603         158 GTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQ---MY-DNILHKPL--QLPGGKTVAACDLLVGLL  231 (321)
T ss_pred             CCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHH---HH-HHHhcCCC--CCCCCCCHHHHHHHHHHc
Confidence            8899998                          7777775432111   00 11111111  112233455889999999


Q ss_pred             cccCCCCCCHH
Q 039505          315 SSKVNRRPLMN  325 (342)
Q Consensus       315 ~~~P~~RPsm~  325 (342)
                      +.+|++||+..
T Consensus       232 ~~~p~~R~~~~  242 (321)
T cd05603         232 HKDQRRRLGAK  242 (321)
T ss_pred             cCCHhhcCCCC
Confidence            99999999753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.68  E-value=4.8e-17  Score=149.36  Aligned_cols=158  Identities=23%  Similarity=0.238  Sum_probs=98.2

Q ss_pred             cCcCCCeeEEEEEECCC--eEEEEEccCCCCCC---C----cc-----------EE----EeeCC---cEEE--E-----
Q 039505          167 PYKGGFITVYHGQLVKS--EVAMKMLSPSSSQG---H----VP-----------IV----ECHVG---ALIT--I-----  212 (342)
Q Consensus       167 lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~---~----~~-----------Lv----~c~~~---~lv~--m-----  212 (342)
                      ||+|+||.||+++....  .+|+|++.......   .    .+           ++    .+..+   ++++  +     
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            79999999999998754  99999986432111   0    01           22    22222   2333  1     


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-----cccccccC
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-----MSTTIAGT  262 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-----~~~~~~Gt  262 (342)
                                             ++.||+|||+   .+|+||||||+||+++++  .++.+++....     ......|+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~  157 (277)
T cd05607          81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHS---MDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGT  157 (277)
T ss_pred             HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHH---CCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCC
Confidence                                   8899999999   999999999999999988  34444332211     11224678


Q ss_pred             cceee--------------------------cCCCCccccccccc-ccccccccccccCCCCCChHHHHHHHHHHHHccc
Q 039505          263 AGFLN--------------------------TKNPVISKSIENGN-SHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVS  315 (342)
Q Consensus       263 ~~y~a--------------------------tG~~P~~~~~~~~~-~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~  315 (342)
                      ..|+|                          ||+.|+........ ..+. .......+.. .......++.+++..||+
T Consensus       158 ~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~li~~~L~  235 (277)
T cd05607         158 NGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELK-RRTLEDEVKF-EHQNFTEESKDICRLFLA  235 (277)
T ss_pred             CCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHH-HHhhcccccc-ccccCCHHHHHHHHHHhc
Confidence            88887                          88888764322110 0010 1111111110 011234458899999999


Q ss_pred             ccCCCCCCHHHHHH
Q 039505          316 SKVNRRPLMNQVVM  329 (342)
Q Consensus       316 ~~P~~RPsm~eV~~  329 (342)
                      .+|++||+++|+++
T Consensus       236 ~~P~~R~~~~~~~~  249 (277)
T cd05607         236 KKPEDRLGSREKND  249 (277)
T ss_pred             cCHhhCCCCccchh
Confidence            99999999977653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.68  E-value=2.6e-16  Score=147.10  Aligned_cols=100  Identities=18%  Similarity=0.205  Sum_probs=65.4

Q ss_pred             cccCcCCCeeEEEEEECC---C-eEEEEEccCCCCCC--Ccc--------------EE-Ee-eCC----cEEE--E----
Q 039505          165 RVPYKGGFITVYHGQLVK---S-EVAMKMLSPSSSQG--HVP--------------IV-EC-HVG----ALIT--I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~---~-~vAVK~l~~~~~~~--~~~--------------Lv-~c-~~~----~lv~--m----  212 (342)
                      +.||+|+||+||+|+..+   + .||+|.+.......  .++              +. .+ ...    ++++  +    
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~~l   86 (317)
T cd07868           7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDL   86 (317)
T ss_pred             cccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCCCH
Confidence            789999999999999753   2 89999986542111  111              22 11 111    1221  0    


Q ss_pred             ------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC------CccccCCCCCc--
Q 039505          213 ------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK------SRISPVEGGTH--  254 (342)
Q Consensus       213 ------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~------a~~~~~~~~~~--  254 (342)
                                                    ++.||+|||+   .+|+||||||+|||++.+      .++.+++....  
T Consensus        87 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~  163 (317)
T cd07868          87 WHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN  163 (317)
T ss_pred             HHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccC
Confidence                                          7899999999   999999999999999532      44444433211  


Q ss_pred             -------cccccccCcceee
Q 039505          255 -------MSTTIAGTAGFLN  267 (342)
Q Consensus       255 -------~~~~~~Gt~~y~a  267 (342)
                             ......||+.|+|
T Consensus       164 ~~~~~~~~~~~~~~t~~y~a  183 (317)
T cd07868         164 SPLKPLADLDPVVVTFWYRA  183 (317)
T ss_pred             CCCccccccCCccccccccC
Confidence                   1123567888888

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.68  E-value=4.4e-17  Score=153.23  Aligned_cols=155  Identities=19%  Similarity=0.169  Sum_probs=97.6

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc---c-------------------EE-EeeCC---cEEE--E--
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV---P-------------------IV-ECHVG---ALIT--I--  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~---~-------------------Lv-~c~~~---~lv~--m--  212 (342)
                      ++||+|+||+||+|....+  .+|||++.........   .                   +. .+...   ++++  +  
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            4799999999999998654  9999998653211000   0                   22 22222   3333  1  


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc------cccccc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH------MSTTIA  260 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~------~~~~~~  260 (342)
                                              +++||+|||+   .+|+||||||+|||++++.  ++.+++....      ......
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~---~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~  157 (325)
T cd05604          81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHS---INIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFC  157 (325)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCccccc
Confidence                                    8999999999   9999999999999999883  4444432211      123356


Q ss_pred             cCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcc
Q 039505          261 GTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASV  314 (342)
Q Consensus       261 Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl  314 (342)
                      ||+.|+|                          ||+.||.......   +. ..+....+  .........+.+++.+|+
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~---~~-~~~~~~~~--~~~~~~~~~~~~ll~~ll  231 (325)
T cd05604         158 GTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAE---MY-DNILHKPL--VLRPGASLTAWSILEELL  231 (325)
T ss_pred             CChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHH---HH-HHHHcCCc--cCCCCCCHHHHHHHHHHh
Confidence            8999998                          7777775432111   00 01111111  011123345778899999


Q ss_pred             cccCCCCCCHHHHH
Q 039505          315 SSKVNRRPLMNQVV  328 (342)
Q Consensus       315 ~~~P~~RPsm~eV~  328 (342)
                      +.+|.+||++++.+
T Consensus       232 ~~~p~~R~~~~~~~  245 (325)
T cd05604         232 EKDRQRRLGAKEDF  245 (325)
T ss_pred             ccCHHhcCCCCCCH
Confidence            99999999876433

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.68  E-value=7.4e-17  Score=142.86  Aligned_cols=158  Identities=18%  Similarity=0.249  Sum_probs=107.8

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc-------EE-EeeCC-cEEE--------------E-------
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP-------IV-ECHVG-ALIT--------------I-------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~-------Lv-~c~~~-~lv~--------------m-------  212 (342)
                      ..||.|+-|.|+|++.+.+  .+|||.+..........       ++ .|.+- ++|-              |       
T Consensus        98 ~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~C~  177 (391)
T KOG0983|consen   98 GDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMSTCA  177 (391)
T ss_pred             HhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHHHH
Confidence            6799999999999999875  99999998765443333       22 22221 1111              1       


Q ss_pred             ----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-----cccccccCc
Q 039505          213 ----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-----MSTTIAGTA  263 (342)
Q Consensus       213 ----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-----~~~~~~Gt~  263 (342)
                                            +..||.||.+  .++|||||+||+|||+|+.  -|+++++-...     ..+..+|.+
T Consensus       178 ekLlkrik~piPE~ilGk~tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtrsAGC~  255 (391)
T KOG0983|consen  178 EKLLKRIKGPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTRSAGCA  255 (391)
T ss_pred             HHHHHHhcCCchHHhhhhhHHHHHHHHHHHHH--hcceeecccCccceEEccCCCEEeecccccceeecccccccccCCc
Confidence                                  7789999988  4889999999999999998  44555443321     224467999


Q ss_pred             ceee-----------------------------cCCCCccccccccccccccccccc---ccCCCCCChHHHHHHHHHHH
Q 039505          264 GFLN-----------------------------TKNPVISKSIENGNSHLRDKSTVD---LSFKGEFDIISVGKAVEIAM  311 (342)
Q Consensus       264 ~y~a-----------------------------tG~~P~~~~~~~~~~~l~~~~~~d---~~l~~~~~~~~~~~l~~l~~  311 (342)
                      .|||                             ||+.|+....-+.  ... ..+++   |.+++.  ......+.++..
T Consensus       256 ~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdF--e~l-tkvln~ePP~L~~~--~gFSp~F~~fv~  330 (391)
T KOG0983|consen  256 AYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDF--EVL-TKVLNEEPPLLPGH--MGFSPDFQSFVK  330 (391)
T ss_pred             cccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccH--HHH-HHHHhcCCCCCCcc--cCcCHHHHHHHH
Confidence            9999                             8999988743222  000 11121   333322  114456888889


Q ss_pred             HcccccCCCCCCHHHHHH
Q 039505          312 ASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       312 ~Cl~~~P~~RPsm~eV~~  329 (342)
                      .|+++|+.+||.-.++++
T Consensus       331 ~CL~kd~r~RP~Y~~Ll~  348 (391)
T KOG0983|consen  331 DCLTKDHRKRPKYNKLLE  348 (391)
T ss_pred             HHhhcCcccCcchHHHhc
Confidence            999999999999887654

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.68  E-value=9.5e-17  Score=144.70  Aligned_cols=157  Identities=20%  Similarity=0.200  Sum_probs=101.6

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc-----------------EE----EeeCC---cEEE--E----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP-----------------IV----ECHVG---ALIT--I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~-----------------Lv----~c~~~---~lv~--m----  212 (342)
                      +.||+|++|.||+|....+  .|++|.+..........                 ++    ++...   ++++  +    
T Consensus         6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   85 (256)
T cd08529           6 NKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENGD   85 (256)
T ss_pred             EEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCCCCc
Confidence            8899999999999998754  99999986542221111                 22    22222   3333  1    


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------cccccc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIA  260 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~  260 (342)
                                              ++.||.|||+   .+++||||||+||+++++  .++.+++....      ......
T Consensus        86 L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~---~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~  162 (256)
T cd08529          86 LHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHS---KKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIV  162 (256)
T ss_pred             HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEeCCCCEEEcccccceeccCccchhhccc
Confidence                                    8899999999   899999999999999987  34443332111      112245


Q ss_pred             cCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcc
Q 039505          261 GTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASV  314 (342)
Q Consensus       261 Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl  314 (342)
                      |++.|+|                          ||+.|+.......   ... .+... .....+......+.+++.+||
T Consensus       163 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~-~~~~~-~~~~~~~~~~~~~~~~i~~~l  237 (256)
T cd08529         163 GTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA---LIL-KIIRG-VFPPVSQMYSQQLAQLIDQCL  237 (256)
T ss_pred             cCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH---HHH-HHHcC-CCCCCccccCHHHHHHHHHHc
Confidence            7777777                          7888876543211   010 01110 011112233456889999999


Q ss_pred             cccCCCCCCHHHHHH
Q 039505          315 SSKVNRRPLMNQVVM  329 (342)
Q Consensus       315 ~~~P~~RPsm~eV~~  329 (342)
                      +.+|++||++.++++
T Consensus       238 ~~~p~~Rp~~~~ll~  252 (256)
T cd08529         238 TKDYRQRPDTFQLLR  252 (256)
T ss_pred             cCCcccCcCHHHHhh
Confidence            999999999999986

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.68  E-value=4.7e-17  Score=153.29  Aligned_cols=154  Identities=19%  Similarity=0.181  Sum_probs=94.3

Q ss_pred             cCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc------------------------EE-EeeCC---cEEE--E--
Q 039505          167 PYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP------------------------IV-ECHVG---ALIT--I--  212 (342)
Q Consensus       167 lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~------------------------Lv-~c~~~---~lv~--m--  212 (342)
                      ||+|+||+||+|+....  .||||++.........+                        +. .+...   ++|+  +  
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            79999999999998754  99999986431110000                        11 11111   2222  1  


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------cccccc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIA  260 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~  260 (342)
                                              +++||+|||+   .+|+||||||+|||++.+  .++.+++....      .....+
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  157 (330)
T cd05586          81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHK---YDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFC  157 (330)
T ss_pred             ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCcc
Confidence                                    8999999999   999999999999999988  44444433211      122356


Q ss_pred             cCcceee---------------------------cCCCCcccccccccccccc-cccccccCCCCCChHHHHHHHHHHHH
Q 039505          261 GTAGFLN---------------------------TKNPVISKSIENGNSHLRD-KSTVDLSFKGEFDIISVGKAVEIAMA  312 (342)
Q Consensus       261 Gt~~y~a---------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~l~~~~~~~~~~~l~~l~~~  312 (342)
                      ||+.|+|                           ||+.||.......   +.. ....+..+..   ......+.+++.+
T Consensus       158 gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~---~~~~i~~~~~~~~~---~~~~~~~~~li~~  231 (330)
T cd05586         158 GTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQ---MYRNIAFGKVRFPK---NVLSDEGRQFVKG  231 (330)
T ss_pred             CCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHH---HHHHHHcCCCCCCC---ccCCHHHHHHHHH
Confidence            8889988                           6666665432111   000 0000111111   1123457788999


Q ss_pred             cccccCCCCCC----HHHHHH
Q 039505          313 SVSSKVNRRPL----MNQVVM  329 (342)
Q Consensus       313 Cl~~~P~~RPs----m~eV~~  329 (342)
                      ||+.+|++||+    +.++++
T Consensus       232 ~L~~~P~~R~~~~~~~~~ll~  252 (330)
T cd05586         232 LLNRNPQHRLGAHRDAVELKE  252 (330)
T ss_pred             HcCCCHHHCCCCCCCHHHHhc
Confidence            99999999984    555543

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.68  E-value=8.5e-17  Score=147.45  Aligned_cols=161  Identities=16%  Similarity=0.178  Sum_probs=99.3

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc--------------------EE-EeeCC---cEEE--
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP--------------------IV-ECHVG---ALIT--  211 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~--------------------Lv-~c~~~---~lv~--  211 (342)
                      +|.  +.||+|+||.||+|....+  .||+|+++.........                    ++ +|..+   ++++  
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~   81 (283)
T cd06617           2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEV   81 (283)
T ss_pred             CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhh
Confidence            455  7899999999999998754  99999987653221111                    22 33332   3333  


Q ss_pred             E-----------------------------ehhhhhhhhccCCC-CeeeCCCCcceEEecCC--CccccCCCCCcc----
Q 039505          212 I-----------------------------PKEGLEYLHQGLKH-PIIQRDMKSTNILLNEK--SRISPVEGGTHM----  255 (342)
Q Consensus       212 m-----------------------------ia~gL~yLH~~~~~-~IiHrDlKp~NILLd~~--a~~~~~~~~~~~----  255 (342)
                      +                             ++.||+|||+   . +++||||||+||+++.+  .++.+++.....    
T Consensus        82 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~  158 (283)
T cd06617          82 MDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHS---KLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSV  158 (283)
T ss_pred             hcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeeccccccccccc
Confidence            2                             8899999998   5 89999999999999987  344443322111    


Q ss_pred             -ccccccCcceee------------------------------cCCCCcccccccccccccc-cccccccCCCCCChHHH
Q 039505          256 -STTIAGTAGFLN------------------------------TKNPVISKSIENGNSHLRD-KSTVDLSFKGEFDIISV  303 (342)
Q Consensus       256 -~~~~~Gt~~y~a------------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~l~~~~~~~~~  303 (342)
                       .....|+..|+|                              ||+.|+....... ..+.. .....+.+.   .....
T Consensus       159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~  234 (283)
T cd06617         159 AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPF-QQLKQVVEEPSPQLP---AEKFS  234 (283)
T ss_pred             ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCH-HHHHHHHhcCCCCCC---ccccC
Confidence             111345555655                              5666654321110 00000 000111111   11234


Q ss_pred             HHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          304 GKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       304 ~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ..+.+++.+||+.+|++||++.++++
T Consensus       235 ~~l~~li~~~l~~~p~~Rp~~~~il~  260 (283)
T cd06617         235 PEFQDFVNKCLKKNYKERPNYPELLQ  260 (283)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhc
Confidence            56889999999999999999999985

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.68  E-value=1.1e-18  Score=152.26  Aligned_cols=158  Identities=19%  Similarity=0.215  Sum_probs=106.3

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCC--CCcc---------------EE-----EeeCC--cEEE--E----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQ--GHVP---------------IV-----ECHVG--ALIT--I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~--~~~~---------------Lv-----~c~~~--~lv~--m----  212 (342)
                      ++||+|.|+.||++.+..+  .+|+|+++.....  +.++               ++     +-+++  ++||  |    
T Consensus        17 e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m~G~d   96 (355)
T KOG0033|consen   17 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGE   96 (355)
T ss_pred             HHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecccchH
Confidence            8999999999999987655  8888887654221  1111               22     22233  6777  4    


Q ss_pred             ----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-----CccccCCCC-----Cccccccc
Q 039505          213 ----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-----SRISPVEGG-----THMSTTIA  260 (342)
Q Consensus       213 ----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-----a~~~~~~~~-----~~~~~~~~  260 (342)
                                            |+++|.|+|.   .+|||||+||+|+||...     .|+.+++..     .......+
T Consensus        97 l~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~---n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~~G~~  173 (355)
T KOG0033|consen   97 LFEDIVAREFYSEADASHCIQQILEALAYCHS---NGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAWHGFA  173 (355)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeeeeccCCCceeecccceEEEeCCcccccccc
Confidence                                  8899999999   999999999999999876     234333322     22334478


Q ss_pred             cCcceee--------------------------cCCCCccccccc-ccccccccccccccCCCCCChHHHHHHHHHHHHc
Q 039505          261 GTAGFLN--------------------------TKNPVISKSIEN-GNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMAS  313 (342)
Q Consensus       261 Gt~~y~a--------------------------tG~~P~~~~~~~-~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~C  313 (342)
                      |||+|||                          .|.+||.+.... ..+.+.+   -+-.+.+.......++..+|+.++
T Consensus       174 GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~---g~yd~~~~~w~~is~~Ak~LvrrM  250 (355)
T KOG0033|consen  174 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKA---GAYDYPSPEWDTVTPEAKSLIRRM  250 (355)
T ss_pred             CCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhc---cccCCCCcccCcCCHHHHHHHHHH
Confidence            9999999                          889998874322 1111111   111122222333445578899999


Q ss_pred             ccccCCCCCCHHHHH
Q 039505          314 VSSKVNRRPLMNQVV  328 (342)
Q Consensus       314 l~~~P~~RPsm~eV~  328 (342)
                      +..||.+|.|+.|.+
T Consensus       251 L~~dP~kRIta~EAL  265 (355)
T KOG0033|consen  251 LTVNPKKRITADEAL  265 (355)
T ss_pred             hccChhhhccHHHHh
Confidence            999999999998865

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.68  E-value=6.3e-17  Score=148.85  Aligned_cols=158  Identities=25%  Similarity=0.259  Sum_probs=98.9

Q ss_pred             cCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC-------cc-----------EE----EeeCC---cEEE--E-----
Q 039505          167 PYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH-------VP-----------IV----ECHVG---ALIT--I-----  212 (342)
Q Consensus       167 lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~-------~~-----------Lv----~c~~~---~lv~--m-----  212 (342)
                      ||+|+||+||++.....  .||||++........       .+           ++    ++...   ++++  +     
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            79999999999998644  899999865321111       01           11    12221   2222  1     


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------ccccc
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTI  259 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~  259 (342)
                                               ++.||+|||+   .+|+||||||+||+++++  .++.+++....      .....
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~  157 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQ---RRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGY  157 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcccccc
Confidence                                     8899999999   999999999999999987  34444332211      11234


Q ss_pred             ccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHc
Q 039505          260 AGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMAS  313 (342)
Q Consensus       260 ~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~C  313 (342)
                      .||+.|+|                          ||+.||..........-....+.....  ..+......+.+++..|
T Consensus       158 ~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~  235 (280)
T cd05608         158 AGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSV--TYPDKFSPASKSFCEAL  235 (280)
T ss_pred             CCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCC--CCcccCCHHHHHHHHHH
Confidence            68888988                          788887654321100000011111111  12223445688999999


Q ss_pred             ccccCCCCC-----CHHHHHH
Q 039505          314 VSSKVNRRP-----LMNQVVM  329 (342)
Q Consensus       314 l~~~P~~RP-----sm~eV~~  329 (342)
                      |+.+|++||     ++.++++
T Consensus       236 l~~~P~~R~~~~~~~~~~~l~  256 (280)
T cd05608         236 LAKDPEKRLGFRDGNCDGLRT  256 (280)
T ss_pred             hcCCHHHhcCCCCCCHHHHhc
Confidence            999999999     6677764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.68  E-value=9.1e-17  Score=151.76  Aligned_cols=105  Identities=22%  Similarity=0.333  Sum_probs=70.7

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC-----cc--------------EE-EeeCC---cEEE--
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH-----VP--------------IV-ECHVG---ALIT--  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~-----~~--------------Lv-~c~~~---~lv~--  211 (342)
                      ++|+  +.||+|+||.||++.+..+  .+|+|.+........     .+              ++ +|..+   ++++  
T Consensus         5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   84 (333)
T cd06650           5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH   84 (333)
T ss_pred             hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEec
Confidence            4555  8999999999999998755  899998875432111     11              23 33333   3333  


Q ss_pred             E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc----ccccc
Q 039505          212 I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH----MSTTI  259 (342)
Q Consensus       212 m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~----~~~~~  259 (342)
                      +                          ++.||.|||+.  .+|+||||||+|||++++  .++.+++....    .....
T Consensus        85 ~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~--~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~  162 (333)
T cd06650          85 MDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF  162 (333)
T ss_pred             CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhccccC
Confidence            1                          88999999972  479999999999999987  44444433221    11234


Q ss_pred             ccCcceee
Q 039505          260 AGTAGFLN  267 (342)
Q Consensus       260 ~Gt~~y~a  267 (342)
                      .||..|+|
T Consensus       163 ~~~~~y~a  170 (333)
T cd06650         163 VGTRSYMS  170 (333)
T ss_pred             CCCccccC
Confidence            68888887

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.68  E-value=1.1e-16  Score=152.74  Aligned_cols=105  Identities=22%  Similarity=0.276  Sum_probs=71.4

Q ss_pred             hhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc------------EE-EeeCC---cEEE--E-----
Q 039505          160 TNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP------------IV-ECHVG---ALIT--I-----  212 (342)
Q Consensus       160 t~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~------------Lv-~c~~~---~lv~--m-----  212 (342)
                      ..+|.  +.||+|+||.||+|.....  .||+|+...........            ++ ++..+   ++|+  +     
T Consensus        65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~  144 (357)
T PHA03209         65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGTTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYSSDLY  144 (357)
T ss_pred             hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccCCcHH
Confidence            34566  8999999999999998765  89999754332110000            33 33332   2222  1     


Q ss_pred             ---------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-----cccccccCcc
Q 039505          213 ---------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-----MSTTIAGTAG  264 (342)
Q Consensus       213 ---------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-----~~~~~~Gt~~  264 (342)
                                           ++.||.|||+   .+|+||||||+|||++.+  .++.+++....     ......||+.
T Consensus       145 ~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~  221 (357)
T PHA03209        145 TYLTKRSRPLPIDQALIIEKQILEGLRYLHA---QRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLAGTVE  221 (357)
T ss_pred             HHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEecCccccccccCccccccccccc
Confidence                                 8999999999   899999999999999988  44444433221     1123568888


Q ss_pred             eee
Q 039505          265 FLN  267 (342)
Q Consensus       265 y~a  267 (342)
                      |+|
T Consensus       222 y~a  224 (357)
T PHA03209        222 TNA  224 (357)
T ss_pred             ccC
Confidence            988

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.68  E-value=6.9e-17  Score=148.93  Aligned_cols=160  Identities=23%  Similarity=0.236  Sum_probs=100.3

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC-------cc--------------EE-EeeCC---cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH-------VP--------------IV-ECHVG---ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~-------~~--------------Lv-~c~~~---~lv~--m---  212 (342)
                      +.||+|+||+||+|.+..+  .+|+|.+........       .+              +. .+..+   ++++  +   
T Consensus         6 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~   85 (285)
T cd05632           6 RVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNGG   85 (285)
T ss_pred             EEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEeccCc
Confidence            7899999999999998654  899999865421111       11              11 22222   2333  1   


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-----cccccc
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-----MSTTIA  260 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-----~~~~~~  260 (342)
                                               ++.||.|||+   .+|+||||||+||+++++  .++.+++....     ......
T Consensus        86 ~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~---~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~  162 (285)
T cd05632          86 DLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHR---ENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGRV  162 (285)
T ss_pred             cHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccCCC
Confidence                                     8899999999   999999999999999987  44444443211     112246


Q ss_pred             cCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcc
Q 039505          261 GTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASV  314 (342)
Q Consensus       261 Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl  314 (342)
                      |+..|+|                          ||+.||...........+...+....  ..........+.+++..|+
T Consensus       163 g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l  240 (285)
T cd05632         163 GTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETE--EVYSAKFSEEAKSICKMLL  240 (285)
T ss_pred             CCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccc--cccCccCCHHHHHHHHHHc
Confidence            7888877                          78888865432210000001111110  1112223445788999999


Q ss_pred             cccCCCCCC-----HHHHHH
Q 039505          315 SSKVNRRPL-----MNQVVM  329 (342)
Q Consensus       315 ~~~P~~RPs-----m~eV~~  329 (342)
                      +.+|++||+     +.+++.
T Consensus       241 ~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05632         241 TKDPKQRLGCQEEGAGEVKR  260 (285)
T ss_pred             cCCHhHcCCCcccChHHHHc
Confidence            999999999     566654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.68  E-value=7.9e-17  Score=151.44  Aligned_cols=156  Identities=23%  Similarity=0.295  Sum_probs=99.7

Q ss_pred             cccCcCCCeeEEEEEEC----CC-eEEEEEccCCCC---CC-C----cc--------------EE-EeeCC---cEEE--
Q 039505          165 RVPYKGGFITVYHGQLV----KS-EVAMKMLSPSSS---QG-H----VP--------------IV-ECHVG---ALIT--  211 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~----~~-~vAVK~l~~~~~---~~-~----~~--------------Lv-~c~~~---~lv~--  211 (342)
                      +.||+|+||.||+++..    .+ .||||+++....   .. .    .+              ++ ++..+   ++++  
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            57999999999999863    23 899999865321   00 0    01              22 22222   3333  


Q ss_pred             E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCC------cccc
Q 039505          212 I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGT------HMST  257 (342)
Q Consensus       212 m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~------~~~~  257 (342)
                      +                          +++||+|||+   .+|+||||||+|||++.+  .++.+++...      ....
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  158 (323)
T cd05584          82 LSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQ---QGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTH  158 (323)
T ss_pred             CCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCccc
Confidence            1                          8899999999   999999999999999988  4444443221      1122


Q ss_pred             ccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHH
Q 039505          258 TIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAM  311 (342)
Q Consensus       258 ~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~  311 (342)
                      ...||+.|+|                          ||+.||.......  . . ..+.....  ..+......+.+++.
T Consensus       159 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~--~-~-~~~~~~~~--~~~~~~~~~~~~li~  232 (323)
T cd05584         159 TFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKK--T-I-DKILKGKL--NLPPYLTPEARDLLK  232 (323)
T ss_pred             ccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHH--H-H-HHHHcCCC--CCCCCCCHHHHHHHH
Confidence            3578999988                          7888876543211  0 0 11111111  112223445789999


Q ss_pred             HcccccCCCCC-----CHHHHHH
Q 039505          312 ASVSSKVNRRP-----LMNQVVM  329 (342)
Q Consensus       312 ~Cl~~~P~~RP-----sm~eV~~  329 (342)
                      +|++.+|++||     ++.++++
T Consensus       233 ~~l~~~p~~R~~~~~~~~~~l~~  255 (323)
T cd05584         233 KLLKRNPSSRLGAGPGDAAEVQS  255 (323)
T ss_pred             HHcccCHhHcCCCCCCCHHHHhc
Confidence            99999999999     7777654

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.68  E-value=8.8e-17  Score=149.75  Aligned_cols=117  Identities=15%  Similarity=0.154  Sum_probs=75.0

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCcc--------ccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHM--------STTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~~--------~~~~~Gt~~y~a---------------  267 (342)
                      ++.||+|||+   .+++||||||+|||++++.  ++.+++.....        .....++..|+|               
T Consensus       149 i~~aL~~lH~---~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv  225 (307)
T cd05098         149 VARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV  225 (307)
T ss_pred             HHHHHHHHHH---CCcccccccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHH
Confidence            6789999999   9999999999999999883  44433322110        011123356776               


Q ss_pred             -----------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhcc
Q 039505          268 -----------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       268 -----------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                                 | |+.|+.......   +..  .+......+.+......+.+++.+||+.+|++||+|.+|++.|+++.
T Consensus       226 wslG~~l~el~~~g~~p~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~  300 (307)
T cd05098         226 WSFGVLLWEIFTLGGSPYPGVPVEE---LFK--LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL  300 (307)
T ss_pred             HHHHHHHHHHHcCCCCCCCcCCHHH---HHH--HHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence                       4 667765432111   110  11111111222334556888999999999999999999999999876


Q ss_pred             CC
Q 039505          336 GS  337 (342)
Q Consensus       336 ~~  337 (342)
                      ..
T Consensus       301 ~~  302 (307)
T cd05098         301 AL  302 (307)
T ss_pred             HH
Confidence            53

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.68  E-value=9.1e-17  Score=155.21  Aligned_cols=102  Identities=21%  Similarity=0.220  Sum_probs=70.8

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc--------------EE-EeeCC---cEEE--E----
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP--------------IV-ECHVG---ALIT--I----  212 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~--------------Lv-~c~~~---~lv~--m----  212 (342)
                      ++|+  +.||+|+||.||+|....+  .||+|.......  ..|              +. ++...   ++++  +    
T Consensus        92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~~~~--~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~~~L  169 (391)
T PHA03212         92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQRGGT--ATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYKTDL  169 (391)
T ss_pred             CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhhhhh--HHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCCCCH
Confidence            3466  8999999999999998755  899997653221  111              33 23222   3332  1    


Q ss_pred             ---------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-------cccccccC
Q 039505          213 ---------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-------MSTTIAGT  262 (342)
Q Consensus       213 ---------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-------~~~~~~Gt  262 (342)
                                           +++||+|||+   .+|+||||||+|||++.+  .++.+++....       ......||
T Consensus       170 ~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~---~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt  246 (391)
T PHA03212        170 YCYLAAKRNIAICDILAIERSVLRAIQYLHE---NRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWAGT  246 (391)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHhEEEcCCCCEEEEeCCcccccccccccccccccCc
Confidence                                 8899999999   899999999999999987  44555443211       11235789


Q ss_pred             cceee
Q 039505          263 AGFLN  267 (342)
Q Consensus       263 ~~y~a  267 (342)
                      +.|+|
T Consensus       247 ~~y~a  251 (391)
T PHA03212        247 IATNA  251 (391)
T ss_pred             cCCCC
Confidence            99988

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.68  E-value=2.1e-16  Score=143.86  Aligned_cols=163  Identities=19%  Similarity=0.221  Sum_probs=102.7

Q ss_pred             cccCcCCCeeEEEEEECC--C-eEEEEEccCCCCCCC------c-------------------c----EE-EeeCC---c
Q 039505          165 RVPYKGGFITVYHGQLVK--S-EVAMKMLSPSSSQGH------V-------------------P----IV-ECHVG---A  208 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~--~-~vAVK~l~~~~~~~~------~-------------------~----Lv-~c~~~---~  208 (342)
                      +.||+|+||.||+|.+..  + .+|+|.+........      .                   .    ++ +|..+   +
T Consensus         6 ~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~   85 (269)
T cd08528           6 EHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLENDRLY   85 (269)
T ss_pred             hhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCCeEE
Confidence            789999999999999876  3 899998864321110      0                   0    22 33332   3


Q ss_pred             EEE--E------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc
Q 039505          209 LIT--I------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH  254 (342)
Q Consensus       209 lv~--m------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~  254 (342)
                      +++  +                              ++.||.|||+.  .+++||||||+||+++++  .++.+++....
T Consensus        86 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~--~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~  163 (269)
T cd08528          86 IVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKE--KRIVHRDLTPNNIMLGEDDKVTITDFGLAKQ  163 (269)
T ss_pred             EEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccC--CceeecCCCHHHEEECCCCcEEEecccceee
Confidence            333  1                              88899999962  679999999999999988  34444332211


Q ss_pred             -----cccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHH
Q 039505          255 -----MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISV  303 (342)
Q Consensus       255 -----~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~  303 (342)
                           ......|+..|++                          +|+.|+.......   .. ..+.+............
T Consensus       164 ~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~---~~-~~~~~~~~~~~~~~~~~  239 (269)
T cd08528         164 KQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLS---LA-TKIVEAVYEPLPEGMYS  239 (269)
T ss_pred             cccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHH---HH-HHHhhccCCcCCcccCC
Confidence                 1122456666666                          7877775432111   00 11111111111111234


Q ss_pred             HHHHHHHHHcccccCCCCCCHHHHHHHHHh
Q 039505          304 GKAVEIAMASVSSKVNRRPLMNQVVMVREQ  333 (342)
Q Consensus       304 ~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~  333 (342)
                      ..+.+++.+||+.+|++||++.||.++++.
T Consensus       240 ~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~  269 (269)
T cd08528         240 EDVTDVITSCLTPDAEARPDIIQVSAMISD  269 (269)
T ss_pred             HHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence            568889999999999999999999998863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.68  E-value=8.9e-17  Score=146.87  Aligned_cols=113  Identities=13%  Similarity=0.134  Sum_probs=72.8

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCCCc--cccCCCCCc--------cccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSR--ISPVEGGTH--------MSTTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~--~~~~~~~~~--------~~~~~~Gt~~y~a---------------  267 (342)
                      ++.||.|||+   .+++||||||+|||++++..  +.+++....        ......++..|+|               
T Consensus       128 i~~~l~~lH~---~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di  204 (277)
T cd05032         128 IADGMAYLAA---KKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDV  204 (277)
T ss_pred             HHHHHHHHHh---CCccccccChheEEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccch
Confidence            7889999999   99999999999999998833  333322111        1112345666776               


Q ss_pred             -----------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHh
Q 039505          268 -----------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQ  333 (342)
Q Consensus       268 -----------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~  333 (342)
                                 | |+.|+.......   +.. .+.+... ...+......+.+++.+||+.+|++|||+.++++.|++
T Consensus       205 ~slG~il~el~t~g~~p~~~~~~~~---~~~-~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  277 (277)
T cd05032         205 WSFGVVLWEMATLAEQPYQGLSNEE---VLK-FVIDGGH-LDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD  277 (277)
T ss_pred             HHHHHHHHHhhccCCCCCccCCHHH---HHH-HHhcCCC-CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence                       4 666665432211   000 0011111 11222345668899999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.68  E-value=4.6e-17  Score=156.12  Aligned_cols=165  Identities=18%  Similarity=0.212  Sum_probs=101.7

Q ss_pred             HhhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC-------cc-----------E---E-EeeCC---cE
Q 039505          159 VTNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH-------VP-----------I---V-ECHVG---AL  209 (342)
Q Consensus       159 at~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~-------~~-----------L---v-~c~~~---~l  209 (342)
                      ..++|.  +.||+|+||.||+++...+  .+|+|++........       .+           +   . .+..+   ++
T Consensus        41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l  120 (370)
T cd05621          41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM  120 (370)
T ss_pred             CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence            345566  8999999999999998765  899999864211110       01           2   2 22222   33


Q ss_pred             EE--E-------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------
Q 039505          210 IT--I-------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------  254 (342)
Q Consensus       210 v~--m-------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------  254 (342)
                      |+  +                         ++.||+|||+   .+|+||||||+|||++++  .++.+++....      
T Consensus       121 v~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~---~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~  197 (370)
T cd05621         121 VMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGM  197 (370)
T ss_pred             EEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEEecccceecccCCc
Confidence            33  1                         8899999999   999999999999999987  45555443221      


Q ss_pred             -cccccccCcceee------------------------------cCCCCccccccccccccccccccccc--CCCCCChH
Q 039505          255 -MSTTIAGTAGFLN------------------------------TKNPVISKSIENGNSHLRDKSTVDLS--FKGEFDII  301 (342)
Q Consensus       255 -~~~~~~Gt~~y~a------------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~--l~~~~~~~  301 (342)
                       ......||++|+|                              ||+.||.......  .+  ..+.+..  +.-+....
T Consensus       198 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~--~~--~~i~~~~~~~~~p~~~~  273 (370)
T cd05621         198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVG--TY--SKIMDHKNSLNFPEDVE  273 (370)
T ss_pred             eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHH--HH--HHHHhCCcccCCCCccc
Confidence             1123568999988                              6777775432211  00  1111111  11111112


Q ss_pred             HHHHHHHHHHHcccccCCC--CCCHHHHHHH
Q 039505          302 SVGKAVEIAMASVSSKVNR--RPLMNQVVMV  330 (342)
Q Consensus       302 ~~~~l~~l~~~Cl~~~P~~--RPsm~eV~~~  330 (342)
                      ....+.+++..|++.++.+  ||++.|+++.
T Consensus       274 ~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h  304 (370)
T cd05621         274 ISKHAKNLICAFLTDREVRLGRNGVEEIKQH  304 (370)
T ss_pred             CCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence            2445677778888755543  8899998764

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.68  E-value=1.4e-16  Score=143.89  Aligned_cols=160  Identities=16%  Similarity=0.230  Sum_probs=99.8

Q ss_pred             cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCC---cc--------------EE-EeeCC---cEEE--E--------
Q 039505          165 RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGH---VP--------------IV-ECHVG---ALIT--I--------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~---~~--------------Lv-~c~~~---~lv~--m--------  212 (342)
                      +.||+|+||.||+|.+.++ .+|+|.+........   .+              ++ ++...   .+++  +        
T Consensus        10 ~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~   89 (256)
T cd05112          10 QEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDY   89 (256)
T ss_pred             eeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCCcHHHH
Confidence            8899999999999998766 999999875432111   01              22 22222   2222  1        


Q ss_pred             -------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc-------ccccccCcc
Q 039505          213 -------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM-------STTIAGTAG  264 (342)
Q Consensus       213 -------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~-------~~~~~Gt~~  264 (342)
                                         ++.||+|||+   .+++||||||+||+++.+  .++.+++.....       .....++.+
T Consensus        90 ~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~  166 (256)
T cd05112          90 LRAQRGKFSQETLLGMCLDVCEGMAYLES---SNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVK  166 (256)
T ss_pred             HHhCccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccccceEEEcCCCeEEECCCcceeecccCcccccCCCccchh
Confidence                               7899999999   899999999999999987  344443322110       011223445


Q ss_pred             eee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHccccc
Q 039505          265 FLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSK  317 (342)
Q Consensus       265 y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~  317 (342)
                      |+|                          + |+.|+.......   +.+ .+ ........+......+.+++.+||+.+
T Consensus       167 ~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~---~~~-~~-~~~~~~~~~~~~~~~~~~l~~~~l~~~  241 (256)
T cd05112         167 WSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE---VVE-TI-NAGFRLYKPRLASQSVYELMQHCWKER  241 (256)
T ss_pred             hcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH---HHH-HH-hCCCCCCCCCCCCHHHHHHHHHHcccC
Confidence            665                          4 777775432211   111 00 000000011123456889999999999


Q ss_pred             CCCCCCHHHHHHHHH
Q 039505          318 VNRRPLMNQVVMVRE  332 (342)
Q Consensus       318 P~~RPsm~eV~~~L~  332 (342)
                      |++|||+.+|++.|.
T Consensus       242 p~~Rp~~~~~l~~l~  256 (256)
T cd05112         242 PEDRPSFSLLLHQLA  256 (256)
T ss_pred             hhhCCCHHHHHHhhC
Confidence            999999999998873

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.68  E-value=5.5e-17  Score=160.77  Aligned_cols=157  Identities=14%  Similarity=0.162  Sum_probs=102.0

Q ss_pred             cccCcCCCeeEEEEEECC--C-eEEEEEccCCCCCCCc----c--------------EE-EeeCC---cEEE--E-----
Q 039505          165 RVPYKGGFITVYHGQLVK--S-EVAMKMLSPSSSQGHV----P--------------IV-ECHVG---ALIT--I-----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~--~-~vAVK~l~~~~~~~~~----~--------------Lv-~c~~~---~lv~--m-----  212 (342)
                      ++||+|+||.||+|....  + .||+|.+.........    +              ++ +|..+   ++|+  +     
T Consensus        73 ~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L  152 (478)
T PTZ00267         73 TLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDL  152 (478)
T ss_pred             EEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCCCCCH
Confidence            899999999999998653  3 7888876543221110    1              22 33222   3333  1     


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc--------ccc
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH--------MST  257 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~--------~~~  257 (342)
                                               ++.||+|||+   .+|+||||||+|||++.+  .++.+++....        ...
T Consensus       153 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~~~  229 (478)
T PTZ00267        153 NKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHS---RKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVAS  229 (478)
T ss_pred             HHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcccccccc
Confidence                                     8899999999   999999999999999988  45555443321        123


Q ss_pred             ccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHH
Q 039505          258 TIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAM  311 (342)
Q Consensus       258 ~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~  311 (342)
                      ..+||++|+|                          ||+.|+.......   +.. .+..... ...+......+.+++.
T Consensus       230 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~---~~~-~~~~~~~-~~~~~~~s~~~~~li~  304 (478)
T PTZ00267        230 SFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQRE---IMQ-QVLYGKY-DPFPCPVSSGMKALLD  304 (478)
T ss_pred             ccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH---HHH-HHHhCCC-CCCCccCCHHHHHHHH
Confidence            3569999998                          8888886543211   110 0111111 0112223456889999


Q ss_pred             HcccccCCCCCCHHHHHH
Q 039505          312 ASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       312 ~Cl~~~P~~RPsm~eV~~  329 (342)
                      .||+.+|++||++.+++.
T Consensus       305 ~~L~~dP~~Rps~~~~l~  322 (478)
T PTZ00267        305 PLLSKNPALRPTTQQLLH  322 (478)
T ss_pred             HHhccChhhCcCHHHHHh
Confidence            999999999999999864

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.68  E-value=5.6e-17  Score=155.39  Aligned_cols=162  Identities=17%  Similarity=0.131  Sum_probs=98.9

Q ss_pred             cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCCC--c----c--------------EE-EeeCC--------cEEE--
Q 039505          165 RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQGH--V----P--------------IV-ECHVG--------ALIT--  211 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~~--~----~--------------Lv-~c~~~--------~lv~--  211 (342)
                      +.||+|+||.||++.... + .||||++........  +    +              ++ ++...        ++++  
T Consensus         6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~   85 (372)
T cd07853           6 RPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTEL   85 (372)
T ss_pred             ceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEeec
Confidence            889999999999999764 4 999999865321110  0    1              22 22211        2222  


Q ss_pred             E-------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-------ccc
Q 039505          212 I-------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-------MST  257 (342)
Q Consensus       212 m-------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-------~~~  257 (342)
                      +                         +++||+|||+   .+|+||||||+|||++++  .++.+++....       ...
T Consensus        86 ~~~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~~~~  162 (372)
T cd07853          86 MQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHS---AGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMT  162 (372)
T ss_pred             cccCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHHEEECCCCCEEeccccceeecccCccccCC
Confidence            1                         8899999999   999999999999999988  34444332211       112


Q ss_pred             ccccCcceee---------------------------cCCCCcccccccc-cccccc------------------cccc-
Q 039505          258 TIAGTAGFLN---------------------------TKNPVISKSIENG-NSHLRD------------------KSTV-  290 (342)
Q Consensus       258 ~~~Gt~~y~a---------------------------tG~~P~~~~~~~~-~~~l~~------------------~~~~-  290 (342)
                      ...+|..|+|                           ||+.||....... ...+.+                  ..+. 
T Consensus       163 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~  242 (372)
T cd07853         163 QEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILR  242 (372)
T ss_pred             CCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHh
Confidence            2356777776                           8888876543211 000000                  0000 


Q ss_pred             cccCCC------CCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          291 DLSFKG------EFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       291 d~~l~~------~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      .+.-..      .........+.+++.+|++.||++|||+.|+++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  287 (372)
T cd07853         243 GPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALA  287 (372)
T ss_pred             CCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence            000000      011122456789999999999999999999985

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.67  E-value=1.5e-16  Score=145.79  Aligned_cols=157  Identities=22%  Similarity=0.280  Sum_probs=101.0

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc-------------------EE-EeeCC---cEEE--E-----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP-------------------IV-ECHVG---ALIT--I-----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~---~lv~--m-----  212 (342)
                      +.||+|+||.||+|.+..+  .||+|.++........+                   ++ ++..+   ++|+  +     
T Consensus        10 ~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   89 (277)
T cd06642          10 ERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGGSA   89 (277)
T ss_pred             HHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccCCCcH
Confidence            7899999999999988654  89999987543221111                   11 22222   3333  1     


Q ss_pred             --------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc------ccccccCcc
Q 039505          213 --------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM------STTIAGTAG  264 (342)
Q Consensus       213 --------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~------~~~~~Gt~~  264 (342)
                                          +++||.|||+   .+++|+||+|+||+++++  .++.+++.....      .....|+..
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  166 (277)
T cd06642          90 LDLLKPGPLEETYIATILREILKGLDYLHS---ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPF  166 (277)
T ss_pred             HHHhhcCCCCHHHHHHHHHHHHHHHHHHhc---CCeeccCCChheEEEeCCCCEEEccccccccccCcchhhhcccCccc
Confidence                                8899999999   999999999999999987  344443322111      112356777


Q ss_pred             eee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccC
Q 039505          265 FLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKV  318 (342)
Q Consensus       265 y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P  318 (342)
                      |+|                          ||+.|+.......  ..   ..+...............+.+++.+||+.+|
T Consensus       167 y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  241 (277)
T cd06642         167 WMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR--VL---FLIPKNSPPTLEGQYSKPFKEFVEACLNKDP  241 (277)
T ss_pred             ccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh--HH---hhhhcCCCCCCCcccCHHHHHHHHHHccCCc
Confidence            776                          7888876432221  00   0111111111222344568899999999999


Q ss_pred             CCCCCHHHHHH
Q 039505          319 NRRPLMNQVVM  329 (342)
Q Consensus       319 ~~RPsm~eV~~  329 (342)
                      ++||+|.++++
T Consensus       242 ~~Rp~~~~il~  252 (277)
T cd06642         242 RFRPTAKELLK  252 (277)
T ss_pred             ccCcCHHHHHH
Confidence            99999999986

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.67  E-value=6.3e-17  Score=155.19  Aligned_cols=76  Identities=24%  Similarity=0.267  Sum_probs=55.8

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC-------cc--------------EE-EeeCC---cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH-------VP--------------IV-ECHVG---ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~-------~~--------------Lv-~c~~~---~lv~--m---  212 (342)
                      +.||+|+||+||+++...+  .||||++........       .+              +. .+.++   ++|+  +   
T Consensus         7 ~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g   86 (376)
T cd05598           7 KTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGG   86 (376)
T ss_pred             EEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCCCCC
Confidence            8899999999999998755  999999864321000       00              22 22222   2232  1   


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK  243 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~  243 (342)
                                             ++.||+|||+   .+|+||||||+|||++.+
T Consensus        87 ~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nill~~~  137 (376)
T cd05598          87 DMMSLLIRLGIFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRD  137 (376)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHEEECCC
Confidence                                   7899999999   999999999999999987

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.67  E-value=1.5e-16  Score=143.66  Aligned_cols=158  Identities=18%  Similarity=0.202  Sum_probs=99.3

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc-------------------EE-EeeCC---cEEE--E-----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP-------------------IV-ECHVG---ALIT--I-----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~---~lv~--m-----  212 (342)
                      +.||+|+||.||++....+  .+|+|.++........+                   +. .+..+   ++++  +     
T Consensus         6 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l   85 (255)
T cd08219           6 RVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGGDL   85 (255)
T ss_pred             EEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCCCcH
Confidence            7899999999999998754  99999886432211111                   22 22222   2222  1     


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCcc------cccccc
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHM------STTIAG  261 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~~------~~~~~G  261 (342)
                                             ++.||.|||+   .+|+|+||||+||+++++.  ++.+++.....      .....|
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  162 (255)
T cd08219          86 MQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHE---KRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYVG  162 (255)
T ss_pred             HHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEECCCCcEEEcccCcceeecccccccccccC
Confidence                                   8999999999   9999999999999999873  33333221111      112456


Q ss_pred             Ccceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHccc
Q 039505          262 TAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVS  315 (342)
Q Consensus       262 t~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~  315 (342)
                      ++.|+|                          +|+.|+.......   ... .+..... ...+......+.+++.+||+
T Consensus       163 ~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~---~~~-~~~~~~~-~~~~~~~~~~~~~li~~~l~  237 (255)
T cd08219         163 TPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKN---LIL-KVCQGSY-KPLPSHYSYELRSLIKQMFK  237 (255)
T ss_pred             CccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHH---HHH-HHhcCCC-CCCCcccCHHHHHHHHHHHh
Confidence            666766                          7888876533211   000 0000000 11122233457889999999


Q ss_pred             ccCCCCCCHHHHHHH
Q 039505          316 SKVNRRPLMNQVVMV  330 (342)
Q Consensus       316 ~~P~~RPsm~eV~~~  330 (342)
                      .+|++||++.+++..
T Consensus       238 ~~P~~Rp~~~~il~~  252 (255)
T cd08219         238 RNPRSRPSATTILSR  252 (255)
T ss_pred             CCcccCCCHHHHhhc
Confidence            999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.67  E-value=1.7e-16  Score=147.00  Aligned_cols=115  Identities=11%  Similarity=0.172  Sum_probs=69.6

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCcc--------ccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHM--------STTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~~--------~~~~~Gt~~y~a---------------  267 (342)
                      ++.||+|||+   .+++||||||+|||++++.  ++.+++.....        .....+++.|++               
T Consensus       139 i~~al~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di  215 (296)
T cd05095         139 IASGMKYLSS---LNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDV  215 (296)
T ss_pred             HHHHHHHHHH---CCeecccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhh
Confidence            7889999999   8999999999999999873  33333322111        011122344554               


Q ss_pred             -----------c--CCCCcccccccccccccc--ccccc---ccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          268 -----------T--KNPVISKSIENGNSHLRD--KSTVD---LSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       268 -----------t--G~~P~~~~~~~~~~~l~~--~~~~d---~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                                 |  |..|+.......   ++.  .+...   .......+..+...+.+++.+||+.+|++||+|.+|++
T Consensus       216 wSlG~~l~el~~~~~~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~  292 (296)
T cd05095         216 WAFGVTLWEILTLCKEQPYSQLSDEQ---VIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA  292 (296)
T ss_pred             hHHHHHHHHHHHhCCCCCccccChHH---HHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence                       2  555554322111   000  00000   00001112234467889999999999999999999999


Q ss_pred             HHHh
Q 039505          330 VREQ  333 (342)
Q Consensus       330 ~L~~  333 (342)
                      .|++
T Consensus       293 ~l~~  296 (296)
T cd05095         293 TLLE  296 (296)
T ss_pred             HHhC
Confidence            9864

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.67  E-value=1.8e-16  Score=144.46  Aligned_cols=162  Identities=16%  Similarity=0.199  Sum_probs=100.6

Q ss_pred             cccCcCCCeeEEEEEECC----C-eEEEEEccCCCCCCCcc-------------------EE-EeeCC---cEEE--E--
Q 039505          165 RVPYKGGFITVYHGQLVK----S-EVAMKMLSPSSSQGHVP-------------------IV-ECHVG---ALIT--I--  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~----~-~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~---~lv~--m--  212 (342)
                      +.||+|+||.||+|.+..    . .+|+|.++........+                   +. ++..+   ++++  +  
T Consensus        10 ~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   89 (267)
T cd05066          10 KVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMEN   89 (267)
T ss_pred             eeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCC
Confidence            899999999999998741    2 79999987543211110                   22 33332   3333  1  


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCccc---------
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHMS---------  256 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~~~---------  256 (342)
                                               ++.||+|||+   .+++||||||+|||++++.  ++.+++......         
T Consensus        90 ~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~  166 (267)
T cd05066          90 GSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTT  166 (267)
T ss_pred             CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeehhhchhcEEECCCCeEEeCCCCcccccccccceeeec
Confidence                                     7899999999   9999999999999999883  333332211100         


Q ss_pred             cccccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHH
Q 039505          257 TTIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEI  309 (342)
Q Consensus       257 ~~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l  309 (342)
                      ....++..|++                          + |+.|+.......   ... .+.+. ...+.+...+..+.++
T Consensus       167 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~---~~~-~~~~~-~~~~~~~~~~~~~~~l  241 (267)
T cd05066         167 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD---VIK-AIEEG-YRLPAPMDCPAALHQL  241 (267)
T ss_pred             CCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH---HHH-HHhCC-CcCCCCCCCCHHHHHH
Confidence            11112345665                          3 777765432111   000 00000 0111122334568899


Q ss_pred             HHHcccccCCCCCCHHHHHHHHHhc
Q 039505          310 AMASVSSKVNRRPLMNQVVMVREQG  334 (342)
Q Consensus       310 ~~~Cl~~~P~~RPsm~eV~~~L~~i  334 (342)
                      +.+|++.+|++||+|.++++.|+++
T Consensus       242 i~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         242 MLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             HHHHcccCchhCCCHHHHHHHHHhh
Confidence            9999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.67  E-value=1.6e-16  Score=150.63  Aligned_cols=117  Identities=13%  Similarity=0.128  Sum_probs=73.1

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc--------cccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH--------MSTTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~--------~~~~~~Gt~~y~a---------------  267 (342)
                      +++||+|||+   .+|+||||||+|||++++  .++.+++....        ......++..|+|               
T Consensus       188 i~~al~~lH~---~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di  264 (343)
T cd05103         188 VAKGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV  264 (343)
T ss_pred             HHHHHHHHHh---CCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCCCchhhH
Confidence            7789999999   999999999999999987  44444432211        0111234455766               


Q ss_pred             -----------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhcc
Q 039505          268 -----------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       268 -----------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                                 + |..|+.......  .+..  .+........+......+.+++..||+.+|++|||+.||++.|+.+-
T Consensus       265 ~slG~~l~el~~~g~~p~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~  340 (343)
T cd05103         265 WSFGVLLWEIFSLGASPYPGVKIDE--EFCR--RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL  340 (343)
T ss_pred             HHHHHHHHHHHHCCCCCCCCccccH--HHHH--HHhccCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence                       2 666665432111  0000  00000001111112345889999999999999999999999998875


Q ss_pred             C
Q 039505          336 G  336 (342)
Q Consensus       336 ~  336 (342)
                      .
T Consensus       341 ~  341 (343)
T cd05103         341 Q  341 (343)
T ss_pred             h
Confidence            4

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.67  E-value=7.9e-17  Score=145.58  Aligned_cols=161  Identities=16%  Similarity=0.216  Sum_probs=100.8

Q ss_pred             cccCcCCCeeEEEEEECCCeEEEEEccCCCCCC--Ccc--------------EE-EeeCC--cEEE--E-----------
Q 039505          165 RVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQG--HVP--------------IV-ECHVG--ALIT--I-----------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~~vAVK~l~~~~~~~--~~~--------------Lv-~c~~~--~lv~--m-----------  212 (342)
                      +.||+|+||.||+|...+..||+|.++......  ..+              +. ++...  ++++  +           
T Consensus        12 ~~lg~g~~g~v~~~~~~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~   91 (254)
T cd05083          12 EIIGEGEFGAVLQGEYTGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILHNGLYIVMELMSKGNLVNFLRT   91 (254)
T ss_pred             eeeccCCCCceEecccCCCceEEEeecCcchHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCcEEEEECCCCCCHHHHHHh
Confidence            899999999999998655599999986542110  001              22 22222  2222  1           


Q ss_pred             -----------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCccc---cccccCcceee---
Q 039505          213 -----------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHMS---TTIAGTAGFLN---  267 (342)
Q Consensus       213 -----------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~~---~~~~Gt~~y~a---  267 (342)
                                       ++.||.|||+   .+++||||||+||+++.+  .++.+++......   .....+..|+|   
T Consensus        92 ~~~~~~~~~~~~~~~~qi~~al~~lH~---~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~y~~pe~  168 (254)
T cd05083          92 RGRALVSVIQLLQFSLDVAEGMEYLES---KKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKWTAPEA  168 (254)
T ss_pred             cCcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCcEEECCCccceeccccCCCCCCCceecCHHH
Confidence                             8899999999   999999999999999987  3444443222111   11222344554   


Q ss_pred             -----------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCC
Q 039505          268 -----------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPL  323 (342)
Q Consensus       268 -----------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs  323 (342)
                                             + |+.|+.......   +.  +.+........+...+..+.+++.+||+.+|++||+
T Consensus       169 ~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~  243 (254)
T cd05083         169 LKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE---VK--ECVEKGYRMEPPEGCPADVYVLMTSCWETEPKKRPS  243 (254)
T ss_pred             hccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHH---HH--HHHhCCCCCCCCCcCCHHHHHHHHHHcCCChhhCcC
Confidence                                   4 777775443211   00  011111111112234456889999999999999999


Q ss_pred             HHHHHHHHHh
Q 039505          324 MNQVVMVREQ  333 (342)
Q Consensus       324 m~eV~~~L~~  333 (342)
                      +.++++.|++
T Consensus       244 ~~~l~~~l~~  253 (254)
T cd05083         244 FHKLREKLEK  253 (254)
T ss_pred             HHHHHHHHcc
Confidence            9999998864

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.67  E-value=7.3e-17  Score=148.26  Aligned_cols=172  Identities=17%  Similarity=0.217  Sum_probs=107.3

Q ss_pred             CHHHHHHHhhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC---cc---------------EE-Eee---
Q 039505          152 ALELSLRVTNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH---VP---------------IV-ECH---  205 (342)
Q Consensus       152 ~~~~l~~at~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~---~~---------------Lv-~c~---  205 (342)
                      .++.+..++++|.  +.||+|+||.||++.....  .+|+|+++.......   .+               ++ +|.   
T Consensus         9 ~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~   88 (286)
T cd06638           9 IFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKD   88 (286)
T ss_pred             EeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecc
Confidence            3455556777887  8999999999999998655  899998865321110   01               22 331   


Q ss_pred             --CC---cEEE--E------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--Ccc
Q 039505          206 --VG---ALIT--I------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRI  246 (342)
Q Consensus       206 --~~---~lv~--m------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~  246 (342)
                        .+   ++++  +                              +++||.|||+   .+++||||||+||+++++  .++
T Consensus        89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~~~kl  165 (286)
T cd06638          89 VKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHV---NKTIHRDVKGNNILLTTEGGVKL  165 (286)
T ss_pred             cCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHh---CCccccCCCHHhEEECCCCCEEE
Confidence              11   3333  1                              7899999999   899999999999999988  344


Q ss_pred             ccCCCCCc------cccccccCcceee-------------------------------cCCCCcccccccccccccc-cc
Q 039505          247 SPVEGGTH------MSTTIAGTAGFLN-------------------------------TKNPVISKSIENGNSHLRD-KS  288 (342)
Q Consensus       247 ~~~~~~~~------~~~~~~Gt~~y~a-------------------------------tG~~P~~~~~~~~~~~l~~-~~  288 (342)
                      .+++....      ......|++.|+|                               ||+.|+.......  .+.. ..
T Consensus       166 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~--~~~~~~~  243 (286)
T cd06638         166 VDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMR--ALFKIPR  243 (286)
T ss_pred             ccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhH--HHhhccc
Confidence            44333211      1122456776766                               5666655432111  1000 00


Q ss_pred             cccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHH
Q 039505          289 TVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMV  330 (342)
Q Consensus       289 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~  330 (342)
                      ...+.+.  .+......+.+++.+||+.+|++|||+.|+++.
T Consensus       244 ~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  283 (286)
T cd06638         244 NPPPTLH--QPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH  283 (286)
T ss_pred             cCCCccc--CCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence            0001110  111123458899999999999999999999864

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.67  E-value=1.5e-16  Score=151.99  Aligned_cols=168  Identities=15%  Similarity=0.163  Sum_probs=104.9

Q ss_pred             hhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc------c-----------E---E-Eee-CC------
Q 039505          160 TNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV------P-----------I---V-ECH-VG------  207 (342)
Q Consensus       160 t~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~------~-----------L---v-~c~-~~------  207 (342)
                      .++|.  +.||+|+||.||++.....  .||||++.........      +           +   + .+. ..      
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~  102 (364)
T cd07875          23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  102 (364)
T ss_pred             hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence            34566  8999999999999998654  8999998754221110      1           2   2 111 11      


Q ss_pred             --cEEE--E-----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc----
Q 039505          208 --ALIT--I-----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH----  254 (342)
Q Consensus       208 --~lv~--m-----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~----  254 (342)
                        ++|+  +                       +++||+|||+   .+|+||||||+|||++.+  .++.+++....    
T Consensus       103 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~  179 (364)
T cd07875         103 DVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS  179 (364)
T ss_pred             eEEEEEeCCCCCHHHHHHhcCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEECCCCcEEEEeCCCccccCCC
Confidence              2333  1                       8899999999   999999999999999988  44444443221    


Q ss_pred             -cccccccCcceee--------------------------cCCCCcccccccc-cccccc-----------------ccc
Q 039505          255 -MSTTIAGTAGFLN--------------------------TKNPVISKSIENG-NSHLRD-----------------KST  289 (342)
Q Consensus       255 -~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~-~~~l~~-----------------~~~  289 (342)
                       ......||..|+|                          ||+.||....... ...++.                 ...
T Consensus       180 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (364)
T cd07875         180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTY  259 (364)
T ss_pred             CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHH
Confidence             1123568888988                          8998886543111 000000                 000


Q ss_pred             cc--ccCC----------------CCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHH
Q 039505          290 VD--LSFK----------------GEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMV  330 (342)
Q Consensus       290 ~d--~~l~----------------~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~  330 (342)
                      +.  +...                ..........+.+++.+|++.||++|||+.|+++.
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h  318 (364)
T cd07875         260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH  318 (364)
T ss_pred             HhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence            00  0000                00011123457899999999999999999999863

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.67  E-value=1.6e-16  Score=144.88  Aligned_cols=163  Identities=18%  Similarity=0.259  Sum_probs=100.2

Q ss_pred             CcccCcCCCeeEEEEEECCC-----eEEEEEccCCCCCCCcc-------------------EE-EeeCC---cEEE--E-
Q 039505          164 ERVPYKGGFITVYHGQLVKS-----EVAMKMLSPSSSQGHVP-------------------IV-ECHVG---ALIT--I-  212 (342)
Q Consensus       164 ~~~lG~G~fG~Vykg~~~~~-----~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~---~lv~--m-  212 (342)
                      .+.||+|+||.||+|.+...     .||||.++.........                   +. ++..+   ++++  + 
T Consensus         9 ~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~   88 (269)
T cd05065           9 EEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFME   88 (269)
T ss_pred             EeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEecCC
Confidence            38999999999999998542     59999987542211100                   22 33332   3333  1 


Q ss_pred             --------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCccc--------
Q 039505          213 --------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHMS--------  256 (342)
Q Consensus       213 --------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~~~--------  256 (342)
                                                ++.||+|||+   .+++||||||+||+++.+.  ++.+++......        
T Consensus        89 ~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~---~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~  165 (269)
T cd05065          89 NGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTY  165 (269)
T ss_pred             CCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccChheEEEcCCCcEEECCCccccccccCcccccc
Confidence                                      7899999999   9999999999999999873  333332211100        


Q ss_pred             c-cccc--Ccceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHH
Q 039505          257 T-TIAG--TAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKA  306 (342)
Q Consensus       257 ~-~~~G--t~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l  306 (342)
                      . ...|  +..|+|                          + |+.|+.......   +..  .+........+.+++..+
T Consensus       166 ~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~---~~~--~i~~~~~~~~~~~~~~~~  240 (269)
T cd05065         166 TSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD---VIN--AIEQDYRLPPPMDCPTAL  240 (269)
T ss_pred             ccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHH---HHH--HHHcCCcCCCcccCCHHH
Confidence            0 0111  234555                          3 666665432111   000  000001111123345568


Q ss_pred             HHHHHHcccccCCCCCCHHHHHHHHHhc
Q 039505          307 VEIAMASVSSKVNRRPLMNQVVMVREQG  334 (342)
Q Consensus       307 ~~l~~~Cl~~~P~~RPsm~eV~~~L~~i  334 (342)
                      .+++..||+.+|++||++.+|+..|+.+
T Consensus       241 ~~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         241 HQLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            8999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.67  E-value=1.4e-16  Score=145.35  Aligned_cols=164  Identities=13%  Similarity=0.140  Sum_probs=103.9

Q ss_pred             cccCcCCCeeEEEEEECC----C-eEEEEEccCCCCCCCcc-------------------EE-EeeCC--cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVK----S-EVAMKMLSPSSSQGHVP-------------------IV-ECHVG--ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~----~-~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~--~lv~--m---  212 (342)
                      +.||+|+||.||+|.+.+    . .||||...........+                   ++ +|...  ++++  +   
T Consensus        12 ~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~lv~e~~~~~   91 (270)
T cd05056          12 RCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITENPVWIVMELAPLG   91 (270)
T ss_pred             eeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCCCcEEEEEcCCCC
Confidence            899999999999998643    2 79999887554211111                   22 34333  3332  1   


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc-------cccc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM-------STTI  259 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~-------~~~~  259 (342)
                                              ++.||+|||+   .+++||||||+|||++.+  .++.+++.....       ....
T Consensus        92 ~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~  168 (270)
T cd05056          92 ELRSYLQVNKYSLDLASLILYSYQLSTALAYLES---KRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKG  168 (270)
T ss_pred             cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccChheEEEecCCCeEEccCceeeecccccceecCCC
Confidence                                    8999999999   999999999999999987  344433322110       1112


Q ss_pred             ccCcceee---------------------------cCCCCcccccccccccccc-cccccccCCCCCChHHHHHHHHHHH
Q 039505          260 AGTAGFLN---------------------------TKNPVISKSIENGNSHLRD-KSTVDLSFKGEFDIISVGKAVEIAM  311 (342)
Q Consensus       260 ~Gt~~y~a---------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~l~~~~~~~~~~~l~~l~~  311 (342)
                      .++..|+|                           +|+.||.......  .+.. ......    ..+......+.+++.
T Consensus       169 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~--~~~~~~~~~~~----~~~~~~~~~~~~li~  242 (270)
T cd05056         169 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNND--VIGRIENGERL----PMPPNCPPTLYSLMT  242 (270)
T ss_pred             CccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHH--HHHHHHcCCcC----CCCCCCCHHHHHHHH
Confidence            23345655                           3777765443221  0000 000001    112233456888999


Q ss_pred             HcccccCCCCCCHHHHHHHHHhccCC
Q 039505          312 ASVSSKVNRRPLMNQVVMVREQGNGS  337 (342)
Q Consensus       312 ~Cl~~~P~~RPsm~eV~~~L~~i~~~  337 (342)
                      +|+..+|++|||+.+++..|+++...
T Consensus       243 ~~l~~~P~~Rpt~~~~~~~l~~~~~~  268 (270)
T cd05056         243 KCWAYDPSKRPRFTELKAQLSDILQE  268 (270)
T ss_pred             HHcCCChhhCcCHHHHHHHHHHHHhc
Confidence            99999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.67  E-value=1.7e-16  Score=145.91  Aligned_cols=165  Identities=17%  Similarity=0.148  Sum_probs=103.8

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc-------------------EE-EeeCC---cEEE--E-----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP-------------------IV-ECHVG---ALIT--I-----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~---~lv~--m-----  212 (342)
                      +.||+|+||+||++....+  .||+|++..........                   ++ +|...   ++++  +     
T Consensus        11 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   90 (284)
T cd06620          11 SDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSL   90 (284)
T ss_pred             HHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecCCCCCH
Confidence            8899999999999998754  89999886543221111                   22 33322   3343  1     


Q ss_pred             ---------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc----cccccccCcce
Q 039505          213 ---------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH----MSTTIAGTAGF  265 (342)
Q Consensus       213 ---------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~----~~~~~~Gt~~y  265 (342)
                                           ++.||.|||+.  ++++||||||+||+++++.  ++.+++....    ......|+..|
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~~~~~~~~  168 (284)
T cd06620          91 DRIYKKGGPIPVEILGKIAVAVVEGLTYLYNV--HRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADTFVGTSTY  168 (284)
T ss_pred             HHHHHhccCCCHHHHHHHHHHHHHHHHHHHHh--cCeeccCCCHHHEEECCCCcEEEccCCcccchhhhccCccccCccc
Confidence                                 88999999972  5799999999999999883  3333332211    11224577777


Q ss_pred             ee--------------------------cCCCCcccccccc-----cccccc--cccccccCCCCCChHHHHHHHHHHHH
Q 039505          266 LN--------------------------TKNPVISKSIENG-----NSHLRD--KSTVDLSFKGEFDIISVGKAVEIAMA  312 (342)
Q Consensus       266 ~a--------------------------tG~~P~~~~~~~~-----~~~l~~--~~~~d~~l~~~~~~~~~~~l~~l~~~  312 (342)
                      +|                          ||+.|+.......     ...+..  ..+................+.+++.+
T Consensus       169 ~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  248 (284)
T cd06620         169 MSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDA  248 (284)
T ss_pred             CCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHH
Confidence            76                          8999987543310     000000  11111111111111244568899999


Q ss_pred             cccccCCCCCCHHHHHHHH
Q 039505          313 SVSSKVNRRPLMNQVVMVR  331 (342)
Q Consensus       313 Cl~~~P~~RPsm~eV~~~L  331 (342)
                      |++.+|++|||+.|++++.
T Consensus       249 ~l~~dp~~Rpt~~e~~~~~  267 (284)
T cd06620         249 CLLKDPTERPTPQQLCAMP  267 (284)
T ss_pred             HhcCCcccCcCHHHHhcCc
Confidence            9999999999999999864

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.67  E-value=3e-16  Score=143.80  Aligned_cols=158  Identities=20%  Similarity=0.223  Sum_probs=102.8

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC-c----c--------------EE-EeeCC---cEEE--E-----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH-V----P--------------IV-ECHVG---ALIT--I-----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~-~----~--------------Lv-~c~~~---~lv~--m-----  212 (342)
                      +.||+|+||.||+|.+..+  .||+|.+........ .    +              ++ +|..+   ++|+  +     
T Consensus        10 ~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   89 (277)
T cd06640          10 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSA   89 (277)
T ss_pred             hhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCCCCcH
Confidence            7899999999999998654  999999875432110 0    0              33 33333   4444  1     


Q ss_pred             --------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCcc--ccCCCCCc------cccccccCcc
Q 039505          213 --------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI--SPVEGGTH------MSTTIAGTAG  264 (342)
Q Consensus       213 --------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~~--~~~~~~~~------~~~~~~Gt~~  264 (342)
                                          ++.||+|||+   .+++|+||+|+||+++.+.++  .+++....      ......++..
T Consensus        90 ~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~---~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  166 (277)
T cd06640          90 LDLLRAGPFDEFQIATMLKEILKGLDYLHS---EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPF  166 (277)
T ss_pred             HHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCccCcCCChhhEEEcCCCCEEEcccccceeccCCccccccccCccc
Confidence                                7899999999   999999999999999987333  33222111      1112345666


Q ss_pred             eee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccC
Q 039505          265 FLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKV  318 (342)
Q Consensus       265 y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P  318 (342)
                      |+|                          ||+.|+........     ...................+.+++.+||+.+|
T Consensus       167 y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  241 (277)
T cd06640         167 WMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV-----LFLIPKNNPPTLTGEFSKPFKEFIDACLNKDP  241 (277)
T ss_pred             ccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH-----hhhhhcCCCCCCchhhhHHHHHHHHHHcccCc
Confidence            666                          78888765432210     01111111122334456678899999999999


Q ss_pred             CCCCCHHHHHHH
Q 039505          319 NRRPLMNQVVMV  330 (342)
Q Consensus       319 ~~RPsm~eV~~~  330 (342)
                      ++||++.+++..
T Consensus       242 ~~Rp~~~~il~~  253 (277)
T cd06640         242 SFRPTAKELLKH  253 (277)
T ss_pred             ccCcCHHHHHhC
Confidence            999999999754

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.67  E-value=3.5e-16  Score=141.72  Aligned_cols=163  Identities=18%  Similarity=0.283  Sum_probs=103.2

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC--c-------c-----------E---E-EeeCC---cE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH--V-------P-----------I---V-ECHVG---AL  209 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~--~-------~-----------L---v-~c~~~---~l  209 (342)
                      ++|.  +.||+|++|.||+|....+  .||+|.+........  .       +           +   . ++...   ++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            3565  8999999999999997654  999999865422110  0       0           2   2 33332   33


Q ss_pred             EE--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCcc----
Q 039505          210 IT--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHM----  255 (342)
Q Consensus       210 v~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~~----  255 (342)
                      ++  +                          ++.||.|||+   .+|+||||||+||+++++.  ++.+++.....    
T Consensus        82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~  158 (263)
T cd06625          82 FMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTIC  158 (263)
T ss_pred             EEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceeccccc
Confidence            33  1                          8889999999   9999999999999999873  33333221110    


Q ss_pred             ---c--cccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHH
Q 039505          256 ---S--TTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVG  304 (342)
Q Consensus       256 ---~--~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~  304 (342)
                         .  ....|+..|+|                          ||+.|+.......  ...  ...........+.....
T Consensus       159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~  234 (263)
T cd06625         159 SSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMA--AIF--KIATQPTNPQLPSHVSP  234 (263)
T ss_pred             cccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHH--HHH--HHhccCCCCCCCccCCH
Confidence               0  12346667776                          7888876432211  000  01111111122333445


Q ss_pred             HHHHHHHHcccccCCCCCCHHHHHHH
Q 039505          305 KAVEIAMASVSSKVNRRPLMNQVVMV  330 (342)
Q Consensus       305 ~l~~l~~~Cl~~~P~~RPsm~eV~~~  330 (342)
                      .+.+++.+||..+|++|||+.++++.
T Consensus       235 ~~~~li~~~l~~~p~~Rpt~~~ll~~  260 (263)
T cd06625         235 DARNFLRRTFVENAKKRPSAEELLRH  260 (263)
T ss_pred             HHHHHHHHHhhcCcccCCCHHHHhhC
Confidence            68889999999999999999999863

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.67  E-value=7.2e-17  Score=155.21  Aligned_cols=76  Identities=24%  Similarity=0.262  Sum_probs=56.4

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-------c--------------EE-EeeCC---cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-------P--------------IV-ECHVG---ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-------~--------------Lv-~c~~~---~lv~--m---  212 (342)
                      +.||+|+||+||+|+....  .||||++.........       +              +. .+..+   ++|+  +   
T Consensus         7 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~gg   86 (382)
T cd05625           7 KTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGG   86 (382)
T ss_pred             EEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCCCC
Confidence            8999999999999998655  8999998653211000       0              22 22222   3333  1   


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK  243 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~  243 (342)
                                             ++.||+|||+   .+|+||||||+|||++.+
T Consensus        87 ~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~---~~ivHrDlKp~NILl~~~  137 (382)
T cd05625          87 DMMSLLIRMGIFPEDLARFYIAELTCAVESVHK---MGFIHRDIKPDNILIDRD  137 (382)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCC
Confidence                                   7889999999   899999999999999987

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.67  E-value=2.3e-16  Score=152.90  Aligned_cols=115  Identities=16%  Similarity=0.185  Sum_probs=74.7

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc--------cccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH--------MSTTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~--------~~~~~~Gt~~y~a---------------  267 (342)
                      ++.||+|||+   .+|+||||||+|||++++  .++.+++....        ......++..|+|               
T Consensus       248 i~~aL~~LH~---~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv  324 (401)
T cd05107         248 VANGMEFLAS---KNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDV  324 (401)
T ss_pred             HHHHHHHHhc---CCcCcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHH
Confidence            5779999999   999999999999999987  44444433211        0112345677887               


Q ss_pred             -----------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhc
Q 039505          268 -----------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQG  334 (342)
Q Consensus       268 -----------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i  334 (342)
                                 + |+.|+.......  .+  .+.+........+......+.+++.+||+.+|++||++.+|++.|+.+
T Consensus       325 wslGvil~e~l~~g~~P~~~~~~~~--~~--~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~  399 (401)
T cd05107         325 WSFGILLWEIFTLGGTPYPELPMNE--QF--YNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL  399 (401)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCchH--HH--HHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence                       3 666665432111  00  011111111112223445688999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.67  E-value=1.2e-17  Score=161.67  Aligned_cols=160  Identities=19%  Similarity=0.218  Sum_probs=107.9

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc-------------------------------EE-EeeCCc--
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP-------------------------------IV-ECHVGA--  208 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~-------------------------------Lv-~c~~~~--  208 (342)
                      ..||.|+||.|||+..+.+  ..|-|++...+......                               |+ ||.+|.  
T Consensus        38 GELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAVD  117 (1187)
T KOG0579|consen   38 GELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAVD  117 (1187)
T ss_pred             hhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchHh
Confidence            6789999999999998877  67788886654333222                               45 777761  


Q ss_pred             ---EEE---E-----------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------cccccccCc
Q 039505          209 ---LIT---I-----------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIAGTA  263 (342)
Q Consensus       209 ---lv~---m-----------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~Gt~  263 (342)
                         +-.   +           ++.||.|||+   ..|||||||..|||++-+  .|+.+++....      ....+.|||
T Consensus       118 aimlEL~r~LtE~QIqvvc~q~ldALn~LHs---~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDsFIGTP  194 (1187)
T KOG0579|consen  118 AIMLELGRVLTEDQIQVVCYQVLDALNWLHS---QNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDSFIGTP  194 (1187)
T ss_pred             HHHHHhccccchHHHHHHHHHHHHHHHHHhh---cchhhhhccccceEEEecCcEeeecccccccchhHHhhhccccCCc
Confidence               111   1           8899999999   999999999999999887  44454443322      224588999


Q ss_pred             ceee--------cCCCCcccccccc--ccccccc-----------------cc--cc-ccCCCCCChHHHHHHHHHHHHc
Q 039505          264 GFLN--------TKNPVISKSIENG--NSHLRDK-----------------ST--VD-LSFKGEFDIISVGKAVEIAMAS  313 (342)
Q Consensus       264 ~y~a--------tG~~P~~~~~~~~--~~~l~~~-----------------~~--~d-~~l~~~~~~~~~~~l~~l~~~C  313 (342)
                      +|||        .--.||+...+..  .-.++..                 .+  -+ |.+.  .+......+.++...|
T Consensus       195 YWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLl--qPS~Ws~~F~DfLk~c  272 (1187)
T KOG0579|consen  195 YWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLL--QPSHWSRSFSDFLKRC  272 (1187)
T ss_pred             ccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCccc--CcchhhhHHHHHHHHH
Confidence            9999        3446777654321  1122220                 00  01 1111  1334455688899999


Q ss_pred             ccccCCCCCCHHHHHH
Q 039505          314 VSSKVNRRPLMNQVVM  329 (342)
Q Consensus       314 l~~~P~~RPsm~eV~~  329 (342)
                      +..+|..||++.++++
T Consensus       273 L~Knp~~Rp~aaqll~  288 (1187)
T KOG0579|consen  273 LVKNPRNRPPAAQLLK  288 (1187)
T ss_pred             HhcCCccCCCHHHHhh
Confidence            9999999999999864

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.67  E-value=4.2e-17  Score=161.33  Aligned_cols=185  Identities=18%  Similarity=0.241  Sum_probs=125.3

Q ss_pred             CCCHHHHHHHhhccC-----------cccCcCCCeeEEEEEECC--C---eEEEEEccCCCCCCCcc-------------
Q 039505          150 NNALELSLRVTNNFE-----------RVPYKGGFITVYHGQLVK--S---EVAMKMLSPSSSQGHVP-------------  200 (342)
Q Consensus       150 ~~~~~~l~~at~~f~-----------~~lG~G~fG~Vykg~~~~--~---~vAVK~l~~~~~~~~~~-------------  200 (342)
                      .++||+--+|...|.           ++||.|.||+||+|+++-  .   .||||.++....+..+.             
T Consensus       609 P~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFd  688 (996)
T KOG0196|consen  609 PHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFD  688 (996)
T ss_pred             CccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCC
Confidence            356666555555553           699999999999999853  2   89999998775443322             


Q ss_pred             ------------------EE--EeeCC------------cEEE----E---ehhhhhhhhccCCCCeeeCCCCcceEEec
Q 039505          201 ------------------IV--ECHVG------------ALIT----I---PKEGLEYLHQGLKHPIIQRDMKSTNILLN  241 (342)
Q Consensus       201 ------------------Lv--~c~~~------------~lv~----m---ia~gL~yLH~~~~~~IiHrDlKp~NILLd  241 (342)
                                        ++  |...+            +-+.    |   ||.|+.||-+   .+.|||||-..|||++
T Consensus       689 HPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsd---m~YVHRDLAARNILVN  765 (996)
T KOG0196|consen  689 HPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSD---MNYVHRDLAARNILVN  765 (996)
T ss_pred             CCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhh---cCchhhhhhhhheeec
Confidence                              11  22222            0011    1   9999999999   9999999999999999


Q ss_pred             CC--CccccCCCCCcc-------cccccc--Ccceee---------------------------cCCCCccccccccccc
Q 039505          242 EK--SRISPVEGGTHM-------STTIAG--TAGFLN---------------------------TKNPVISKSIENGNSH  283 (342)
Q Consensus       242 ~~--a~~~~~~~~~~~-------~~~~~G--t~~y~a---------------------------tG~~P~~~~~~~~~~~  283 (342)
                      .+  .|+.+++.+.-.       .++.-|  .+.|.|                           .|.+|+.++.....  
T Consensus       766 snLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdV--  843 (996)
T KOG0196|consen  766 SNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV--  843 (996)
T ss_pred             cceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHH--
Confidence            99  444443322110       011111  122333                           78888887654331  


Q ss_pred             ccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccCCCCCCC
Q 039505          284 LRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNGSRITIK  342 (342)
Q Consensus       284 l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~~~~~~k  342 (342)
                         .+.++...+-+.+.+|+..+.+|++.||+++-.+||.+.||+..|..+-.+...+|
T Consensus       844 ---IkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~SLk  899 (996)
T KOG0196|consen  844 ---IKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNSLK  899 (996)
T ss_pred             ---HHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchhhc
Confidence               12233344445578899999999999999999999999999999998866554443

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.67  E-value=1.7e-16  Score=147.32  Aligned_cols=170  Identities=16%  Similarity=0.193  Sum_probs=104.2

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-----c--------------EE-EeeCC---cEEE--E-----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-----P--------------IV-ECHVG---ALIT--I-----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-----~--------------Lv-~c~~~---~lv~--m-----  212 (342)
                      +.||+|+||.||+|....+  .||+|.+.........     +              +. ++...   ++++  +     
T Consensus        12 ~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~~~l~   91 (301)
T cd07873          12 DKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLK   91 (301)
T ss_pred             eEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEeccccCHH
Confidence            7899999999999998754  8999998754322211     1              22 33222   3333  1     


Q ss_pred             ---------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------cccccccCc
Q 039505          213 ---------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIAGTA  263 (342)
Q Consensus       213 ---------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~Gt~  263 (342)
                                           +++||+|||+   .+|+||||||+|||++++  .++.+++....      ......+++
T Consensus        92 ~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~  168 (301)
T cd07873          92 QYLDDCGNSINMHNVKLFLFQLLRGLNYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVVTL  168 (301)
T ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcccccceee
Confidence                                 8899999999   999999999999999988  34444332211      111234556


Q ss_pred             ceee---------------------------cCCCCcccccccc-cc-----------cccc-----ccccc---ccCCC
Q 039505          264 GFLN---------------------------TKNPVISKSIENG-NS-----------HLRD-----KSTVD---LSFKG  296 (342)
Q Consensus       264 ~y~a---------------------------tG~~P~~~~~~~~-~~-----------~l~~-----~~~~d---~~l~~  296 (342)
                      .|+|                           ||+.|+....... ..           ..+.     .+...   +....
T Consensus       169 ~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (301)
T cd07873         169 WYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRA  248 (301)
T ss_pred             cccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCcccc
Confidence            6665                           8998886543211 00           0000     00000   00000


Q ss_pred             C----CChHHHHHHHHHHHHcccccCCCCCCHHHHHH--HHHhccCC
Q 039505          297 E----FDIISVGKAVEIAMASVSSKVNRRPLMNQVVM--VREQGNGS  337 (342)
Q Consensus       297 ~----~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~--~L~~i~~~  337 (342)
                      +    ........+.+++.+|++.+|.+|||+.|+++  .++.+.+.
T Consensus       249 ~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~~~  295 (301)
T cd07873         249 DCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLGER  295 (301)
T ss_pred             ccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccch
Confidence            0    01122345788999999999999999999986  45544443

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.67  E-value=1.4e-16  Score=146.54  Aligned_cols=162  Identities=17%  Similarity=0.131  Sum_probs=98.8

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-----c---------------EE-EeeCC---cEEE--E----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-----P---------------IV-ECHVG---ALIT--I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-----~---------------Lv-~c~~~---~lv~--m----  212 (342)
                      +.||+|+||.||++....+  .+|+|.+.........     +               ++ ++...   .+++  +    
T Consensus        10 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~~~l   89 (288)
T cd06616          10 GEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMDISL   89 (288)
T ss_pred             HHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecccCCH
Confidence            7899999999999998754  9999998754322111     0               22 22222   2222  1    


Q ss_pred             --------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-----ccccc
Q 039505          213 --------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-----MSTTI  259 (342)
Q Consensus       213 --------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-----~~~~~  259 (342)
                                                ++.||+|||+.  .+++||||||+||+++.+  .++.+++....     .....
T Consensus        90 ~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~  167 (288)
T cd06616          90 DKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEE--LKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAKTRD  167 (288)
T ss_pred             HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc--CCeeccCCCHHHEEEccCCcEEEeecchhHHhccCCccccc
Confidence                                      78899999972  589999999999999987  33443322111     01122


Q ss_pred             ccCcceee-----------------------------cCCCCcccccccccccccc-cccccccCCCCCChHHHHHHHHH
Q 039505          260 AGTAGFLN-----------------------------TKNPVISKSIENGNSHLRD-KSTVDLSFKGEFDIISVGKAVEI  309 (342)
Q Consensus       260 ~Gt~~y~a-----------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~l~~~~~~~~~~~l~~l  309 (342)
                      .|+..|+|                             ||+.|+....... ..+.+ .....+.+...........+.++
T Consensus       168 ~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  246 (288)
T cd06616         168 AGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVF-DQLTQVVKGDPPILSNSEEREFSPSFVNF  246 (288)
T ss_pred             cCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHH-HHHhhhcCCCCCcCCCcCCCccCHHHHHH
Confidence            34555544                             6777775432110 00000 00111222222223345668899


Q ss_pred             HHHcccccCCCCCCHHHHHH
Q 039505          310 AMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       310 ~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      +.+||+.+|++|||+.+|+.
T Consensus       247 i~~~l~~~p~~Rpt~~~i~~  266 (288)
T cd06616         247 INLCLIKDESKRPKYKELLE  266 (288)
T ss_pred             HHHHccCChhhCcCHHHHhc
Confidence            99999999999999999985

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.66  E-value=1.2e-16  Score=151.31  Aligned_cols=105  Identities=24%  Similarity=0.273  Sum_probs=69.6

Q ss_pred             hhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC------cc-----------E---E-EeeCC-------
Q 039505          160 TNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH------VP-----------I---V-ECHVG-------  207 (342)
Q Consensus       160 t~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~------~~-----------L---v-~c~~~-------  207 (342)
                      .+.|.  +.||+|+||+||+|....+  .||||++........      .+           +   + ++...       
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   93 (343)
T cd07878          14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFN   93 (343)
T ss_pred             hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccC
Confidence            34555  8899999999999998654  899999875421110      11           1   1 11110       


Q ss_pred             --cEEE--E------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc---
Q 039505          208 --ALIT--I------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH---  254 (342)
Q Consensus       208 --~lv~--m------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~---  254 (342)
                        ++++  +                        +++||+|||+   .+|+||||||+|||++++  .++.+++....   
T Consensus        94 ~~~~~~~~~~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~  170 (343)
T cd07878          94 EVYLVTNLMGADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDCELRILDFGLARQADD  170 (343)
T ss_pred             cEEEEeecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCChhhEEECCCCCEEEcCCccceecCC
Confidence              1221  1                        8999999999   999999999999999988  44444433221   


Q ss_pred             cccccccCcceee
Q 039505          255 MSTTIAGTAGFLN  267 (342)
Q Consensus       255 ~~~~~~Gt~~y~a  267 (342)
                      ......||..|+|
T Consensus       171 ~~~~~~~t~~y~a  183 (343)
T cd07878         171 EMTGYVATRWYRA  183 (343)
T ss_pred             CcCCccccccccC
Confidence            1123467888877

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.66  E-value=3.2e-16  Score=144.20  Aligned_cols=167  Identities=16%  Similarity=0.139  Sum_probs=98.5

Q ss_pred             cccCcCCCeeEEEEEEC-----CC-eEEEEEccCCCCCCCcc-------------------EE-EeeCC-----cEEE--
Q 039505          165 RVPYKGGFITVYHGQLV-----KS-EVAMKMLSPSSSQGHVP-------------------IV-ECHVG-----ALIT--  211 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~-----~~-~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~-----~lv~--  211 (342)
                      +.||+|+||.||++.+.     .+ .||+|.++........+                   +. +|...     .+++  
T Consensus        10 ~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~   89 (284)
T cd05079          10 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEF   89 (284)
T ss_pred             eecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEEEEEc
Confidence            78999999999999853     23 89999987543221111                   22 33221     2333  


Q ss_pred             E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc--------
Q 039505          212 I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH--------  254 (342)
Q Consensus       212 m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~--------  254 (342)
                      +                           ++.||+|||+   .+++||||||+||+++++  .++.+++....        
T Consensus        90 ~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~  166 (284)
T cd05079          90 LPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYY  166 (284)
T ss_pred             cCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccchheEEEcCCCCEEECCCccccccccCccce
Confidence            1                           8999999999   999999999999999988  33333332211        


Q ss_pred             -cccccccCcceee--------------------------cCCCCccccccccc--------ccccc--cccccccCCCC
Q 039505          255 -MSTTIAGTAGFLN--------------------------TKNPVISKSIENGN--------SHLRD--KSTVDLSFKGE  297 (342)
Q Consensus       255 -~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~--------~~l~~--~~~~d~~l~~~  297 (342)
                       ......|+..|+|                          |++.|.........        .....  .+.+......+
T Consensus       167 ~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (284)
T cd05079         167 TVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLP  246 (284)
T ss_pred             eecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccCC
Confidence             0112344555666                          22222111000000        00000  00000000111


Q ss_pred             CChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhc
Q 039505          298 FDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQG  334 (342)
Q Consensus       298 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i  334 (342)
                      .+......+.+++.+||+.+|++||++.++++.|+++
T Consensus       247 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         247 RPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence            1223456789999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.66  E-value=3.8e-17  Score=147.52  Aligned_cols=160  Identities=22%  Similarity=0.308  Sum_probs=102.8

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc------c--------------EE-EeeCC---cEEE--E----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV------P--------------IV-ECHVG---ALIT--I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~------~--------------Lv-~c~~~---~lv~--m----  212 (342)
                      +.||+|+||+||++.....  .+|+|++.........      +              ++ +....   ++++  +    
T Consensus         5 ~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~~~   84 (260)
T PF00069_consen    5 KKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPGGS   84 (260)
T ss_dssp             EEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETTEB
T ss_pred             EEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccccccc
Confidence            7899999999999999876  8999999876432211      1              22 22212   2222  1    


Q ss_pred             ----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCC------ccccccccC
Q 039505          213 ----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGT------HMSTTIAGT  262 (342)
Q Consensus       213 ----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~------~~~~~~~Gt  262 (342)
                                            +++||+|||+   .+|+||||||+||+++++.  ++.+++...      .......++
T Consensus        85 L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~---~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~  161 (260)
T PF00069_consen   85 LQDYLQKNKPLSEEEILKIAYQILEALAYLHS---KGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNPFVGT  161 (260)
T ss_dssp             HHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHH---TTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSSSSSS
T ss_pred             cccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccccccccccc
Confidence                                  8999999999   9999999999999999773  344333321      122335678


Q ss_pred             cceee---------------------------cCCCCcccccccccccccc---cccccccCCCCCChHHHHHHHHHHHH
Q 039505          263 AGFLN---------------------------TKNPVISKSIENGNSHLRD---KSTVDLSFKGEFDIISVGKAVEIAMA  312 (342)
Q Consensus       263 ~~y~a---------------------------tG~~P~~~~~~~~~~~l~~---~~~~d~~l~~~~~~~~~~~l~~l~~~  312 (342)
                      ..|+|                           +|+.|+.............   .........  ........+.+++..
T Consensus       162 ~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~  239 (260)
T PF00069_consen  162 PEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQ--QSREKSEELRDLIKK  239 (260)
T ss_dssp             GGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTT--SHTTSHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccccccccccc--ccchhHHHHHHHHHH
Confidence            88877                           7777777541111001110   000000000  001112678899999


Q ss_pred             cccccCCCCCCHHHHHH
Q 039505          313 SVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       313 Cl~~~P~~RPsm~eV~~  329 (342)
                      ||+.+|++||++.++++
T Consensus       240 ~l~~~p~~R~~~~~l~~  256 (260)
T PF00069_consen  240 MLSKDPEQRPSAEELLK  256 (260)
T ss_dssp             HSSSSGGGSTTHHHHHT
T ss_pred             HccCChhHCcCHHHHhc
Confidence            99999999999999875

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.66  E-value=3.4e-16  Score=149.76  Aligned_cols=161  Identities=24%  Similarity=0.257  Sum_probs=114.5

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc----------------------------------EE--EeeC
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP----------------------------------IV--ECHV  206 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~----------------------------------Lv--~c~~  206 (342)
                      +.||+|.||.||+++.+.+  .+|+|.+++........                                  ++  +|.+
T Consensus        41 ~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~G  120 (382)
T KOG0032|consen   41 RELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVMELCEG  120 (382)
T ss_pred             hhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEecCC
Confidence            8999999999999999874  99999998775543321                                  22  5554


Q ss_pred             C-----cE-E-E--E--------ehhhhhhhhccCCCCeeeCCCCcceEEecCC----CccccCCCCCc-------cccc
Q 039505          207 G-----AL-I-T--I--------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK----SRISPVEGGTH-------MSTT  258 (342)
Q Consensus       207 ~-----~l-v-~--m--------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~----a~~~~~~~~~~-------~~~~  258 (342)
                      +     .+ . |  .        +++++.|||+   .+|+||||||+|+|+...    +++...+++..       ....
T Consensus       121 GeLfd~i~~~~~sE~da~~~~~~il~av~~lH~---~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~~~~~  197 (382)
T KOG0032|consen  121 GELFDRIVKKHYSERDAAGIIRQILEAVKYLHS---LGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGERLHT  197 (382)
T ss_pred             chHHHHHHHccCCHHHHHHHHHHHHHHHHHHHh---CCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCceEee
Confidence            4     11 1 3  1        8999999999   999999999999999876    24444344322       2345


Q ss_pred             cccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHH
Q 039505          259 IAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMA  312 (342)
Q Consensus       259 ~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~  312 (342)
                      ++||++|+|                          +|.+||....+..  ........+.....+........+.+++..
T Consensus       198 ~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~--~~~~i~~~~~~f~~~~w~~is~~akd~i~~  275 (382)
T KOG0032|consen  198 IVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFE--IFLAILRGDFDFTSEPWDDISESAKDFIRK  275 (382)
T ss_pred             ecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhH--HHHHHHcCCCCCCCCCccccCHHHHHHHHH
Confidence            899999999                          8889988766433  111111112223333444456678899999


Q ss_pred             cccccCCCCCCHHHHHHH
Q 039505          313 SVSSKVNRRPLMNQVVMV  330 (342)
Q Consensus       313 Cl~~~P~~RPsm~eV~~~  330 (342)
                      ++..+|.+|+|+.++++.
T Consensus       276 ll~~dp~~R~ta~~~L~H  293 (382)
T KOG0032|consen  276 LLEFDPRKRLTAAQALQH  293 (382)
T ss_pred             hcccCcccCCCHHHHhcC
Confidence            999999999999999873

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.66  E-value=4.5e-16  Score=144.44  Aligned_cols=159  Identities=19%  Similarity=0.190  Sum_probs=102.0

Q ss_pred             cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCCCcc------------------EE-EeeCC---cEEE--E------
Q 039505          165 RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQGHVP------------------IV-ECHVG---ALIT--I------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~~~~------------------Lv-~c~~~---~lv~--m------  212 (342)
                      +.||+|+||.||+|.... + .||+|.+..........                  ++ +|..+   ++++  +      
T Consensus        25 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~  104 (297)
T cd06656          25 EKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT  104 (297)
T ss_pred             eeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecccCCCCHH
Confidence            789999999999999754 4 99999987543221111                  33 33333   4443  1      


Q ss_pred             -------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------cccccccCcce
Q 039505          213 -------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIAGTAGF  265 (342)
Q Consensus       213 -------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~Gt~~y  265 (342)
                                         ++.||.|||+   .+++||||||+|||++.+  .++.+++....      ......|++.|
T Consensus       105 ~~~~~~~~~~~~~~~~~~~l~~~L~~LH~---~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y  181 (297)
T cd06656         105 DVVTETCMDEGQIAAVCRECLQALDFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYW  181 (297)
T ss_pred             HHHHhCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEECcCccceEccCCccCcCcccCCccc
Confidence                               7899999999   899999999999999987  34444332211      11224567777


Q ss_pred             ee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCC
Q 039505          266 LN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVN  319 (342)
Q Consensus       266 ~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~  319 (342)
                      ++                          ||+.|+.......  .+... ..........+......+.+++.+||+.+|+
T Consensus       182 ~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  258 (297)
T cd06656         182 MAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR--ALYLI-ATNGTPELQNPERLSAVFRDFLNRCLEMDVD  258 (297)
T ss_pred             cCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcch--heeee-ccCCCCCCCCccccCHHHHHHHHHHccCChh
Confidence            76                          8888886543221  11000 0000000111222334577899999999999


Q ss_pred             CCCCHHHHHH
Q 039505          320 RRPLMNQVVM  329 (342)
Q Consensus       320 ~RPsm~eV~~  329 (342)
                      +||++.++++
T Consensus       259 ~Rps~~~il~  268 (297)
T cd06656         259 RRGSAKELLQ  268 (297)
T ss_pred             hCcCHHHHhc
Confidence            9999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.66  E-value=3.7e-16  Score=140.78  Aligned_cols=160  Identities=21%  Similarity=0.230  Sum_probs=102.8

Q ss_pred             cccCcCCCeeEEEEEECC----C-eEEEEEccCCCCCCCcc-------------------------------EE--EeeC
Q 039505          165 RVPYKGGFITVYHGQLVK----S-EVAMKMLSPSSSQGHVP-------------------------------IV--ECHV  206 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~----~-~vAVK~l~~~~~~~~~~-------------------------------Lv--~c~~  206 (342)
                      +.||+|+||.||+|....    . .||+|.++.........                               ++  ||..
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            479999999999999863    4 99999998765432111                               22  4432


Q ss_pred             C-------cE---------EEE-----------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc---
Q 039505          207 G-------AL---------ITI-----------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH---  254 (342)
Q Consensus       207 ~-------~l---------v~m-----------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~---  254 (342)
                      +       ..         ..+           +++||+|||+   .+++||||||+||+++++  .++.+++....   
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~  157 (262)
T cd00192          81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS---KKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD  157 (262)
T ss_pred             CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHc---CCcccCccCcceEEECCCCcEEEccccccccccc
Confidence            2       00         011           7899999999   999999999999999998  33333322211   


Q ss_pred             -----cccccccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHH
Q 039505          255 -----MSTTIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIIS  302 (342)
Q Consensus       255 -----~~~~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~  302 (342)
                           ......++..|+|                          + |+.|+.......   +.+ .+.+. .....+...
T Consensus       158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~-~~~~~-~~~~~~~~~  232 (262)
T cd00192         158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEE---VLE-YLRKG-YRLPKPEYC  232 (262)
T ss_pred             ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHH---HHH-HHHcC-CCCCCCccC
Confidence                 1122446667776                          4 577766542211   111 11111 111122333


Q ss_pred             HHHHHHHHHHcccccCCCCCCHHHHHHHHH
Q 039505          303 VGKAVEIAMASVSSKVNRRPLMNQVVMVRE  332 (342)
Q Consensus       303 ~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~  332 (342)
                      ..++.+++.+||+.+|++|||+.|+++.|+
T Consensus       233 ~~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         233 PDELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             ChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence            566889999999999999999999998874

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.66  E-value=4.5e-16  Score=141.37  Aligned_cols=158  Identities=18%  Similarity=0.286  Sum_probs=101.3

Q ss_pred             cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCCc----------c--------------EE-EeeCC---cEEE--E-
Q 039505          165 RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGHV----------P--------------IV-ECHVG---ALIT--I-  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~~----------~--------------Lv-~c~~~---~lv~--m-  212 (342)
                      +.||+|+||+||+|...++ .+|||.+.........          +              ++ +|...   ++++  + 
T Consensus         6 ~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~   85 (265)
T cd06631           6 EVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEFVP   85 (265)
T ss_pred             ceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEEecCC
Confidence            7899999999999988766 8999988754321110          0              23 44433   3333  1 


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc-----------
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH-----------  254 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~-----------  254 (342)
                                               ++.||+|||+   .+|+|+||||+||+++++.  ++.+++....           
T Consensus        86 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  162 (265)
T cd06631          86 GGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHN---NCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHS  162 (265)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHhEEECCCCeEEeccchhhHhhhhcccccccc
Confidence                                     8899999999   8999999999999999873  3333221110           


Q ss_pred             -cccccccCcceee--------------------------cCCCCccccccccc-ccccccccccccCCCCCChHHHHHH
Q 039505          255 -MSTTIAGTAGFLN--------------------------TKNPVISKSIENGN-SHLRDKSTVDLSFKGEFDIISVGKA  306 (342)
Q Consensus       255 -~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~-~~l~~~~~~d~~l~~~~~~~~~~~l  306 (342)
                       ......|+..|+|                          ||+.|+........ ..+.......+.+    +......+
T Consensus       163 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~  238 (265)
T cd06631         163 NMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRL----PDSFSAAA  238 (265)
T ss_pred             ccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCC----CCCCCHHH
Confidence             1112456777776                          88888865432110 0000011111222    22334557


Q ss_pred             HHHHHHcccccCCCCCCHHHHHH
Q 039505          307 VEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       307 ~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      .+++.+||+.+|++||++.+++.
T Consensus       239 ~~~i~~~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         239 IDFVTSCLTRDQHERPSALQLLR  261 (265)
T ss_pred             HHHHHHHhcCCcccCCCHHHHhc
Confidence            88999999999999999999875

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.66  E-value=1.6e-16  Score=145.92  Aligned_cols=113  Identities=11%  Similarity=0.080  Sum_probs=71.9

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc--------ccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM--------STTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~--------~~~~~Gt~~y~a---------------  267 (342)
                      ++.||+|||+   .+++||||||+|||++++  .++.+++.....        .....+++.|+|               
T Consensus       131 i~~al~~LH~---~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di  207 (280)
T cd05092         131 IASGMVYLAS---LHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDI  207 (280)
T ss_pred             HHHHHHHHHH---CCeecccccHhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhH
Confidence            7789999999   999999999999999988  344433322110        111233556766               


Q ss_pred             -----------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHh
Q 039505          268 -----------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQ  333 (342)
Q Consensus       268 -----------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~  333 (342)
                                 | |+.|+.......   ... .+... .....+......+.+++.+||+.+|++||++.+|.+.|++
T Consensus       208 ~slG~il~el~~~g~~p~~~~~~~~---~~~-~~~~~-~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~  280 (280)
T cd05092         208 WSFGVVLWEIFTYGKQPWYQLSNTE---AIE-CITQG-RELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA  280 (280)
T ss_pred             HHHHHHHHHHHcCCCCCCccCCHHH---HHH-HHHcC-ccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence                       5 777765432211   000 00010 0011122334568899999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.66  E-value=2.3e-16  Score=145.33  Aligned_cols=113  Identities=13%  Similarity=0.112  Sum_probs=70.3

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCcc--------ccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHM--------STTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~~--------~~~~~Gt~~y~a---------------  267 (342)
                      ++.||+|||+   .+++||||||+||+++++.  ++.+++.....        .....++..|+|               
T Consensus       139 i~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv  215 (288)
T cd05050         139 VAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDV  215 (288)
T ss_pred             HHHHHHHHHh---CCeecccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHH
Confidence            6789999999   8999999999999999883  44443322110        111223445665               


Q ss_pred             -----------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHh
Q 039505          268 -----------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQ  333 (342)
Q Consensus       268 -----------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~  333 (342)
                                 + |..|+.......   +. ..+.+.... ..+.....++.+++.+||+.+|++|||+.|+++.|++
T Consensus       216 ~slG~il~el~~~~~~p~~~~~~~~---~~-~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         216 WAYGVVLWEIFSYGMQPYYGMAHEE---VI-YYVRDGNVL-SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR  288 (288)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCCHHH---HH-HHHhcCCCC-CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence                       2 555553321111   00 001111111 1122344668999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.66  E-value=3.3e-16  Score=141.55  Aligned_cols=161  Identities=15%  Similarity=0.140  Sum_probs=101.5

Q ss_pred             cccCcCCCeeEEEEEECC-C----eEEEEEccCCCCCC-Ccc---------------E---E-EeeCC--cEEE-E----
Q 039505          165 RVPYKGGFITVYHGQLVK-S----EVAMKMLSPSSSQG-HVP---------------I---V-ECHVG--ALIT-I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~-~----~vAVK~l~~~~~~~-~~~---------------L---v-~c~~~--~lv~-m----  212 (342)
                      ++||+|++|.||+|.+.. +    .||||.+....... .+.               +   + .+...  ++++ +    
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~   80 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLTHPLMMVTELAPLG   80 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcCCeEEEEEEecCCC
Confidence            478999999999999854 2    69999998765421 111               1   1 11111  2222 1    


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc---------c
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM---------S  256 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~---------~  256 (342)
                                               +++||+|||+   .+++||||||+||+++.+  .++.+++.....         .
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~  157 (257)
T cd05040          81 SLLDRLRKDALGHFLISTLCDYAVQIANGMRYLES---KRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVME  157 (257)
T ss_pred             cHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHh---CCccccccCcccEEEecCCEEEeccccccccccccccceecc
Confidence                                     8999999999   999999999999999988  334433322111         1


Q ss_pred             cccccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHH
Q 039505          257 TTIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEI  309 (342)
Q Consensus       257 ~~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l  309 (342)
                      ....++.+|+|                          | |+.|+.......   +.. .+.........+...+..+.++
T Consensus       158 ~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~l  233 (257)
T cd05040         158 EHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ---ILK-KIDKEGERLERPEACPQDIYNV  233 (257)
T ss_pred             cCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH---HHH-HHHhcCCcCCCCccCCHHHHHH
Confidence            12345667776                          5 788875432211   000 0000000011122334568899


Q ss_pred             HHHcccccCCCCCCHHHHHHHHH
Q 039505          310 AMASVSSKVNRRPLMNQVVMVRE  332 (342)
Q Consensus       310 ~~~Cl~~~P~~RPsm~eV~~~L~  332 (342)
                      +.+|++.+|++||++.++++.|.
T Consensus       234 i~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         234 MLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             HHHHCCCCcccCCCHHHHHHHhc
Confidence            99999999999999999999885

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.66  E-value=2.5e-16  Score=142.90  Aligned_cols=161  Identities=17%  Similarity=0.193  Sum_probs=100.9

Q ss_pred             cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCC---cc--------------EE-EeeCC--cEEE--E---------
Q 039505          165 RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGH---VP--------------IV-ECHVG--ALIT--I---------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~---~~--------------Lv-~c~~~--~lv~--m---------  212 (342)
                      +.||+|+||.||++.+..+ .+|+|.+........   .+              +. ++...  ++++  +         
T Consensus        12 ~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~~   91 (260)
T cd05073          12 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFL   91 (260)
T ss_pred             eEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcCCCeEEEEEeCCCCcHHHHH
Confidence            8999999999999998776 899998875432111   11              11 11112  2222  1         


Q ss_pred             -------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc-------cccccccCcc
Q 039505          213 -------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH-------MSTTIAGTAG  264 (342)
Q Consensus       213 -------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~-------~~~~~~Gt~~  264 (342)
                                         ++.||+|||+   .+++||||||+||+++.+.  ++.+++....       ......++..
T Consensus        92 ~~~~~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~  168 (260)
T cd05073          92 KSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIK  168 (260)
T ss_pred             HhCCccccCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccCCccccc
Confidence                               8999999999   8999999999999999883  3333221110       0011223344


Q ss_pred             eee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHccccc
Q 039505          265 FLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSK  317 (342)
Q Consensus       265 y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~  317 (342)
                      |+|                          | |+.|+.......   +..  .+......+........+.+++.+|++.+
T Consensus       169 y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~i~~~l~~~  243 (260)
T cd05073         169 WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE---VIR--ALERGYRMPRPENCPEELYNIMMRCWKNR  243 (260)
T ss_pred             ccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHH---HHH--HHhCCCCCCCcccCCHHHHHHHHHHcccC
Confidence            555                          5 777776432211   000  00001111112233456889999999999


Q ss_pred             CCCCCCHHHHHHHHHh
Q 039505          318 VNRRPLMNQVVMVREQ  333 (342)
Q Consensus       318 P~~RPsm~eV~~~L~~  333 (342)
                      |++||++.++.+.|+.
T Consensus       244 p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         244 PEERPTFEYIQSVLDD  259 (260)
T ss_pred             cccCcCHHHHHHHHhc
Confidence            9999999999999975

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.66  E-value=4.7e-16  Score=143.03  Aligned_cols=159  Identities=23%  Similarity=0.279  Sum_probs=98.9

Q ss_pred             ccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc--c-------------------EE----EeeCC---cEEE--E-
Q 039505          166 VPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV--P-------------------IV----ECHVG---ALIT--I-  212 (342)
Q Consensus       166 ~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~--~-------------------Lv----~c~~~---~lv~--m-  212 (342)
                      +||+|+||.||++.....  .+|+|.+.........  .                   ++    ++..+   ++++  + 
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            489999999999998654  9999988654321111  0                   11    22222   3333  1 


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc----ccccccc
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH----MSTTIAG  261 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~----~~~~~~G  261 (342)
                                               ++.||+|||+   .+|+||||||+|||++++  .++.+++....    ......|
T Consensus        81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  157 (279)
T cd05633          81 GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG  157 (279)
T ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcCC
Confidence                                     7899999999   999999999999999987  34444332211    1122457


Q ss_pred             Ccceee---------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcc
Q 039505          262 TAGFLN---------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASV  314 (342)
Q Consensus       262 t~~y~a---------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl  314 (342)
                      +..|+|                           ||+.||..........+..   .........+......+.+++..|+
T Consensus       158 ~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~li~~~l  234 (279)
T cd05633         158 THGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR---MTLTVNVELPDSFSPELKSLLEGLL  234 (279)
T ss_pred             CcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHH---HhhcCCcCCccccCHHHHHHHHHHh
Confidence            777876                           6777775432211000000   0001111122233456788899999


Q ss_pred             cccCCCCC-----CHHHHHHH
Q 039505          315 SSKVNRRP-----LMNQVVMV  330 (342)
Q Consensus       315 ~~~P~~RP-----sm~eV~~~  330 (342)
                      +.+|++||     +++|+++.
T Consensus       235 ~~~p~~R~~~~~~~~~~~~~h  255 (279)
T cd05633         235 QRDVSKRLGCLGRGAQEVKEH  255 (279)
T ss_pred             cCCHHHhcCCCCCCHHHHHhC
Confidence            99999999     58888763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.66  E-value=3.7e-17  Score=146.13  Aligned_cols=151  Identities=23%  Similarity=0.271  Sum_probs=101.2

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc------------------EE----EeeCC---cEEE-
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP------------------IV----ECHVG---ALIT-  211 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~------------------Lv----~c~~~---~lv~-  211 (342)
                      +|.  +.||.|+||.|...+.+.+  .+|+|++++...-..+.                  ++    -|.+.   ++|+ 
T Consensus        45 dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvme  124 (355)
T KOG0616|consen   45 DFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVME  124 (355)
T ss_pred             hhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEe
Confidence            355  8999999999999998766  99999998764222111                  33    22222   3333 


Q ss_pred             -E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc---ccccc
Q 039505          212 -I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH---MSTTI  259 (342)
Q Consensus       212 -m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~---~~~~~  259 (342)
                       .                          |+.||+|||+   ..|++|||||+|||||.+  -++.++++...   .+.+.
T Consensus       125 yv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~---~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~Tl  201 (355)
T KOG0616|consen  125 YVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHS---LDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTWTL  201 (355)
T ss_pred             ccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHh---cCeeeccCChHHeeeccCCcEEEEeccceEEecCcEEEe
Confidence             1                          8889999999   999999999999999999  56666666533   34558


Q ss_pred             ccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHc
Q 039505          260 AGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMAS  313 (342)
Q Consensus       260 ~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~C  313 (342)
                      ||||.|+|                          .|.+||.......   +. .+++...+.  ++......+.+|+...
T Consensus       202 CGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~---iY-~KI~~~~v~--fP~~fs~~~kdLl~~L  275 (355)
T KOG0616|consen  202 CGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQ---IY-EKILEGKVK--FPSYFSSDAKDLLKKL  275 (355)
T ss_pred             cCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHH---HH-HHHHhCccc--CCcccCHHHHHHHHHH
Confidence            99999999                          8899987665421   11 112221111  1222223356666677


Q ss_pred             ccccCCCC
Q 039505          314 VSSKVNRR  321 (342)
Q Consensus       314 l~~~P~~R  321 (342)
                      ++.|-.+|
T Consensus       276 L~vD~t~R  283 (355)
T KOG0616|consen  276 LQVDLTKR  283 (355)
T ss_pred             HhhhhHhh
Confidence            77777777

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.66  E-value=8.4e-17  Score=153.77  Aligned_cols=82  Identities=30%  Similarity=0.357  Sum_probs=63.8

Q ss_pred             HhhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc------------------EE--EeeCC-----cE
Q 039505          159 VTNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP------------------IV--ECHVG-----AL  209 (342)
Q Consensus       159 at~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~------------------Lv--~c~~~-----~l  209 (342)
                      ..++|.  .+||+|+||.||.|+-+++  .+|+|+++++.-....+                  ++  ||.-.     +|
T Consensus       139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL  218 (550)
T KOG0605|consen  139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL  218 (550)
T ss_pred             CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence            346677  8999999999999998876  99999998875333322                  44  44322     44


Q ss_pred             EE-E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC
Q 039505          210 IT-I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK  243 (342)
Q Consensus       210 v~-m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~  243 (342)
                      |+ +                           .+.|++-+|.   .++|||||||+|+|||..
T Consensus       219 iMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~---~gyIHRDIKPdNlLiD~~  277 (550)
T KOG0605|consen  219 IMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQ---LGYIHRDIKPDNLLIDAK  277 (550)
T ss_pred             EEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHH---cCcccccCChhheeecCC
Confidence            44 1                           5568899999   999999999999999988

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.66  E-value=4e-16  Score=142.22  Aligned_cols=114  Identities=16%  Similarity=0.137  Sum_probs=71.5

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc--------ccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM--------STTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~--------~~~~~Gt~~y~a---------------  267 (342)
                      ++.||+|||+   .+|+||||||+||+++++  .++.+++.....        .....+++.|++               
T Consensus       122 i~~~l~~lH~---~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi  198 (273)
T cd05074         122 IASGMEYLSS---KNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDV  198 (273)
T ss_pred             HHHHHHHHHh---CCEeecccchhhEEEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhh
Confidence            7899999999   899999999999999987  333333322111        011123344443               


Q ss_pred             -----------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhc
Q 039505          268 -----------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQG  334 (342)
Q Consensus       268 -----------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i  334 (342)
                                 + |++|+.......   +.. .+..... ...+......+.+++.+||+.+|++||++.++++.|+++
T Consensus       199 ~slG~il~el~~~g~~p~~~~~~~~---~~~-~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         199 WAFGVTMWEIMTRGQTPYAGVENSE---IYN-YLIKGNR-LKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             HHHHHHHHHHhhCCCCCCCCCCHHH---HHH-HHHcCCc-CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence                       4 667665432211   000 0000000 011123445789999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.66  E-value=2.9e-17  Score=164.39  Aligned_cols=166  Identities=15%  Similarity=0.180  Sum_probs=120.0

Q ss_pred             cCcccCcCCCeeEEEEEECCC-------eEEEEEccCCCCCCCc-c------------------EE-EeeCC---cEEE-
Q 039505          163 FERVPYKGGFITVYHGQLVKS-------EVAMKMLSPSSSQGHV-P------------------IV-ECHVG---ALIT-  211 (342)
Q Consensus       163 f~~~lG~G~fG~Vykg~~~~~-------~vAVK~l~~~~~~~~~-~------------------Lv-~c~~~---~lv~-  211 (342)
                      |.+.||+|+||+||+|+..+.       .||||.++.......+ +                  |+ .|.++   ++|| 
T Consensus       490 ~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFE  569 (774)
T KOG1026|consen  490 FKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVFE  569 (774)
T ss_pred             ehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEE
Confidence            448999999999999986432       7999999887655222 1                  66 88877   5665 


Q ss_pred             -E----------------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--Ccccc
Q 039505          212 -I----------------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISP  248 (342)
Q Consensus       212 -m----------------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~  248 (342)
                       |                                        ||.|++||-+   +.+|||||-..|+|+.++  .|+.+
T Consensus       570 Ym~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~---~~FVHRDLATRNCLVge~l~VKIsD  646 (774)
T KOG1026|consen  570 YMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSS---HHFVHRDLATRNCLVGENLVVKISD  646 (774)
T ss_pred             ecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CcccccchhhhhceeccceEEEecc
Confidence             5                                        9999999999   999999999999999999  55555


Q ss_pred             CCCCCccc--------cccccCcceee---------------------------cCCCCccccccccccccccccccccc
Q 039505          249 VEGGTHMS--------TTIAGTAGFLN---------------------------TKNPVISKSIENGNSHLRDKSTVDLS  293 (342)
Q Consensus       249 ~~~~~~~~--------~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~  293 (342)
                      ++.....-        ....=.+.||+                           .|+.|+........   + ..+.+.+
T Consensus       647 fGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EV---I-e~i~~g~  722 (774)
T KOG1026|consen  647 FGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEV---I-ECIRAGQ  722 (774)
T ss_pred             cccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHH---H-HHHHcCC
Confidence            44332110        01112356776                           67777776554321   0 1112222


Q ss_pred             CCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccC
Q 039505          294 FKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNG  336 (342)
Q Consensus       294 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~  336 (342)
                      + -+.+..++.++.+|++.||+.+|++||+++||-..|+....
T Consensus       723 l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~  764 (774)
T KOG1026|consen  723 L-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQ  764 (774)
T ss_pred             c-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHh
Confidence            3 34677888999999999999999999999999999987644

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.65  E-value=8.6e-17  Score=165.59  Aligned_cols=114  Identities=23%  Similarity=0.244  Sum_probs=72.9

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCC------------------------ccccccccCccee
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGT------------------------HMSTTIAGTAGFL  266 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~------------------------~~~~~~~Gt~~y~  266 (342)
                      |++||.|+|+   .+||||||||.||+||++  .++.+++...                        ...+..+||.-|+
T Consensus       706 IlEGLaYIH~---~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYv  782 (1351)
T KOG1035|consen  706 ILEGLAYIHD---QGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYV  782 (1351)
T ss_pred             HHHHHHHHHh---CceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeee
Confidence            9999999999   999999999999999987  3333322111                        1224578999999


Q ss_pred             e------cCCCCcccccccccccccc-----------------cccccccCCCC--CChHHHHHHHHHHHHcccccCCCC
Q 039505          267 N------TKNPVISKSIENGNSHLRD-----------------KSTVDLSFKGE--FDIISVGKAVEIAMASVSSKVNRR  321 (342)
Q Consensus       267 a------tG~~P~~~~~~~~~~~l~~-----------------~~~~d~~l~~~--~~~~~~~~l~~l~~~Cl~~~P~~R  321 (342)
                      |      ++..+++...+.-..-++-                 ..+.++.++.+  ...+....-.+++.++++.||.+|
T Consensus       783 APEll~~~~~~~Yn~KiDmYSLGIVlFEM~yPF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kR  862 (1351)
T KOG1035|consen  783 APELLSDTSSNKYNSKIDMYSLGIVLFEMLYPFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKR  862 (1351)
T ss_pred             cHHHhcccccccccchhhhHHHHHHHHHHhccCCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccC
Confidence            9      3333454332211000000                 23334444333  223333445678889999999999


Q ss_pred             CCHHHHHH
Q 039505          322 PLMNQVVM  329 (342)
Q Consensus       322 Psm~eV~~  329 (342)
                      ||+.|++.
T Consensus       863 PtA~eLL~  870 (1351)
T KOG1035|consen  863 PTATELLN  870 (1351)
T ss_pred             CCHHHHhh
Confidence            99999874

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.65  E-value=2.8e-16  Score=144.14  Aligned_cols=162  Identities=19%  Similarity=0.176  Sum_probs=97.8

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc------c--------------EE-EeeCC---cEEE--E----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV------P--------------IV-ECHVG---ALIT--I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~------~--------------Lv-~c~~~---~lv~--m----  212 (342)
                      +.||+|++|.||+|+...+  .||||+++........      +              +. ++..+   ++|+  +    
T Consensus         6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~l   85 (285)
T cd07861           6 EKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLSMDL   85 (285)
T ss_pred             eEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCCCCH
Confidence            7899999999999998754  9999998754322110      1              22 33222   2222  1    


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------cccccc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIA  260 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~  260 (342)
                                              +++||+|||+   .+|+||||||+||+++++  .++.+++....      ......
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~  162 (285)
T cd07861          86 KKYLDSLPKGQYMDAELVKSYLYQILQGILFCHS---RRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTHEV  162 (285)
T ss_pred             HHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEEcCCCcEEECcccceeecCCCcccccCCc
Confidence                                    8999999999   999999999999999988  33443332111      111224


Q ss_pred             cCcceee---------------------------cCCCCcccccccc-c-----------ccccc--------ccccccc
Q 039505          261 GTAGFLN---------------------------TKNPVISKSIENG-N-----------SHLRD--------KSTVDLS  293 (342)
Q Consensus       261 Gt~~y~a---------------------------tG~~P~~~~~~~~-~-----------~~l~~--------~~~~d~~  293 (342)
                      +++.|+|                           ||+.|+....... .           ...+.        ....+..
T Consensus       163 ~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (285)
T cd07861         163 VTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKW  242 (285)
T ss_pred             ccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhcccc
Confidence            4566665                           7888876432110 0           00000        0000000


Q ss_pred             CC---CCCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          294 FK---GEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       294 l~---~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ..   .........++.+++.+||+.+|++|||+.+|+.
T Consensus       243 ~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~  281 (285)
T cd07861         243 KKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN  281 (285)
T ss_pred             CcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence            00   0001112345778999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.65  E-value=2.5e-16  Score=152.37  Aligned_cols=166  Identities=19%  Similarity=0.187  Sum_probs=106.3

Q ss_pred             cccCcCCCeeEEEEEECCC------eEEEEEccCCCCCCCcc---------------------EE-EeeCC---cEEE-E
Q 039505          165 RVPYKGGFITVYHGQLVKS------EVAMKMLSPSSSQGHVP---------------------IV-ECHVG---ALIT-I  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~------~vAVK~l~~~~~~~~~~---------------------Lv-~c~~~---~lv~-m  212 (342)
                      ++||+|+||.||+|++...      .||||..+.........                     ++ .|...   ++|. +
T Consensus       163 kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmEl  242 (474)
T KOG0194|consen  163 KKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVMEL  242 (474)
T ss_pred             ceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEEe
Confidence            8999999999999998542      38999988633111111                     22 22222   2222 1


Q ss_pred             ----------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCccccc----
Q 039505          213 ----------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHMSTT----  258 (342)
Q Consensus       213 ----------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~~~~----  258 (342)
                                                  +|+||+|||+   .++|||||-..|+|++.+  .|+.+++........    
T Consensus       243 ~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~---k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~~  319 (474)
T KOG0194|consen  243 CNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHS---KNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMKK  319 (474)
T ss_pred             cCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHH---CCCcchhHhHHHheecCCCeEEeCccccccCCcceeecc
Confidence                                        9999999999   999999999999999997  466666554332100    


Q ss_pred             --cccCcceee---------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHH
Q 039505          259 --IAGTAGFLN---------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEI  309 (342)
Q Consensus       259 --~~Gt~~y~a---------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l  309 (342)
                        ..-...|+|                           .|..|+.+......    ...++-...+...+...+..+..+
T Consensus       320 ~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v----~~kI~~~~~r~~~~~~~p~~~~~~  395 (474)
T KOG0194|consen  320 FLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEV----KAKIVKNGYRMPIPSKTPKELAKV  395 (474)
T ss_pred             ccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHH----HHHHHhcCccCCCCCCCHHHHHHH
Confidence              011244555                           34445444322110    012212122222334556667788


Q ss_pred             HHHcccccCCCCCCHHHHHHHHHhccCC
Q 039505          310 AMASVSSKVNRRPLMNQVVMVREQGNGS  337 (342)
Q Consensus       310 ~~~Cl~~~P~~RPsm~eV~~~L~~i~~~  337 (342)
                      ...||..+|++||+|.++.+.|+.+...
T Consensus       396 ~~~c~~~~p~~R~tm~~i~~~l~~~~~~  423 (474)
T KOG0194|consen  396 MKQCWKKDPEDRPTMSTIKKKLEALEKK  423 (474)
T ss_pred             HHHhccCChhhccCHHHHHHHHHHHHhc
Confidence            8899999999999999999999987654

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.65  E-value=1.6e-16  Score=152.57  Aligned_cols=79  Identities=29%  Similarity=0.305  Sum_probs=57.4

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC-------cc--------------EE-EeeCC---cEEE-
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH-------VP--------------IV-ECHVG---ALIT-  211 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~-------~~--------------Lv-~c~~~---~lv~-  211 (342)
                      +|.  +.||+|+||+||++....+  .||||++........       .+              +. ++.++   ++|+ 
T Consensus         2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E   81 (377)
T cd05629           2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIME   81 (377)
T ss_pred             CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEe
Confidence            455  8899999999999998655  999999864321000       00              22 22222   3333 


Q ss_pred             -E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC
Q 039505          212 -I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK  243 (342)
Q Consensus       212 -m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~  243 (342)
                       +                          ++.||+|||+   .+|+||||||+|||++.+
T Consensus        82 ~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~---~givHrDlkp~NIll~~~  137 (377)
T cd05629          82 FLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHK---LGFIHRDIKPDNILIDRG  137 (377)
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCC
Confidence             1                          8899999999   999999999999999987

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.65  E-value=9e-16  Score=139.46  Aligned_cols=156  Identities=20%  Similarity=0.285  Sum_probs=100.3

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC-------------cc--------------EE-EeeCC---cEEE
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH-------------VP--------------IV-ECHVG---ALIT  211 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~-------------~~--------------Lv-~c~~~---~lv~  211 (342)
                      ..||+|+||.||+|.....  .+|+|.+........             .+              ++ ++.+.   .+++
T Consensus         6 ~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   85 (267)
T cd06628           6 ALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHLNIFL   85 (267)
T ss_pred             ceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccEEEE
Confidence            7899999999999987654  999998865433221             00              22 33322   3333


Q ss_pred             --E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCcc------
Q 039505          212 --I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHM------  255 (342)
Q Consensus       212 --m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~~------  255 (342)
                        +                          ++.||+|||+   .+++||||||+||+++++.  ++.+++.....      
T Consensus        86 e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~---~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~  162 (267)
T cd06628          86 EYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHN---RGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLS  162 (267)
T ss_pred             EecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHh---cCcccccCCHHHEEEcCCCCEEecccCCCccccccccc
Confidence              1                          8899999999   8999999999999999883  33333221110      


Q ss_pred             ------ccccccCcceee--------------------------cCCCCcccccccccccccc-cccccccCCCCCChHH
Q 039505          256 ------STTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRD-KSTVDLSFKGEFDIIS  302 (342)
Q Consensus       256 ------~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~l~~~~~~~~  302 (342)
                            .....|+..|+|                          ||+.|+.......  .+.. .....+.+    +...
T Consensus       163 ~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~----~~~~  236 (267)
T cd06628         163 TKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ--AIFKIGENASPEI----PSNI  236 (267)
T ss_pred             CCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHH--HHHHHhccCCCcC----Cccc
Confidence                  011346667766                          7888876542211  1110 11112222    2233


Q ss_pred             HHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          303 VGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       303 ~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ...+.+++.+||+.+|++||++.||++
T Consensus       237 ~~~~~~li~~~l~~~p~~Rp~~~~il~  263 (267)
T cd06628         237 SSEAIDFLEKTFEIDHNKRPTAAELLK  263 (267)
T ss_pred             CHHHHHHHHHHccCCchhCcCHHHHhh
Confidence            456888999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.65  E-value=1.4e-16  Score=152.85  Aligned_cols=169  Identities=17%  Similarity=0.157  Sum_probs=103.4

Q ss_pred             HHHHHhhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCC--C-----cc--------------EE-EeeCC-
Q 039505          155 LSLRVTNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQG--H-----VP--------------IV-ECHVG-  207 (342)
Q Consensus       155 ~l~~at~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~--~-----~~--------------Lv-~c~~~-  207 (342)
                      ++....++|.  +.||+|+||.||++....+  .+|+|++.......  .     ++              +. .+..+ 
T Consensus        37 ~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~  116 (371)
T cd05622          37 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR  116 (371)
T ss_pred             hcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC
Confidence            3444456777  8999999999999999765  89999986421100  0     00              22 22222 


Q ss_pred             --cEEE--E-------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc--
Q 039505          208 --ALIT--I-------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH--  254 (342)
Q Consensus       208 --~lv~--m-------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~--  254 (342)
                        ++|+  +                         ++.||+|||+   .+|+||||||+|||++.+  .++.+++....  
T Consensus       117 ~~~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~  193 (371)
T cd05622         117 YLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN  193 (371)
T ss_pred             EEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHEEECCCCCEEEEeCCceeEcC
Confidence              2222  1                         8899999999   999999999999999988  44444443211  


Q ss_pred             -----cccccccCcceee------------------------------cCCCCccccccccccccccccccc--ccCCCC
Q 039505          255 -----MSTTIAGTAGFLN------------------------------TKNPVISKSIENGNSHLRDKSTVD--LSFKGE  297 (342)
Q Consensus       255 -----~~~~~~Gt~~y~a------------------------------tG~~P~~~~~~~~~~~l~~~~~~d--~~l~~~  297 (342)
                           ......||+.|+|                              ||+.||.......   .. ..+..  ..+.-.
T Consensus       194 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~---~~-~~i~~~~~~~~~~  269 (371)
T cd05622         194 KEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG---TY-SKIMNHKNSLTFP  269 (371)
T ss_pred             cCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHH---HH-HHHHcCCCcccCC
Confidence                 1224568999988                              6777765432211   00 11111  011111


Q ss_pred             CChHHHHHHHHHHHHcccccCCC--CCCHHHHHHH
Q 039505          298 FDIISVGKAVEIAMASVSSKVNR--RPLMNQVVMV  330 (342)
Q Consensus       298 ~~~~~~~~l~~l~~~Cl~~~P~~--RPsm~eV~~~  330 (342)
                      ........+.+++..|++..+.+  ||++.++.+.
T Consensus       270 ~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h  304 (371)
T cd05622         270 DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH  304 (371)
T ss_pred             CcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence            11233455778888999844433  7788888764

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.65  E-value=4.3e-16  Score=142.69  Aligned_cols=100  Identities=22%  Similarity=0.294  Sum_probs=71.5

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCC-CCcc--------------------EE-EeeCC---------cEEE
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQ-GHVP--------------------IV-ECHVG---------ALIT  211 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~-~~~~--------------------Lv-~c~~~---------~lv~  211 (342)
                      +.||+|+||+||+|+...+  .||+|++.....+ +...                    |. .+...         .+||
T Consensus        17 eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvf   96 (323)
T KOG0594|consen   17 EKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVF   96 (323)
T ss_pred             HHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEE
Confidence            6799999999999998654  9999999877542 2211                    23 33321         3555


Q ss_pred             --E-----------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCc--cccCCCCCc----
Q 039505          212 --I-----------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSR--ISPVEGGTH----  254 (342)
Q Consensus       212 --m-----------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~--~~~~~~~~~----  254 (342)
                        +                             +++||+|||+   ++|+||||||.|||++++..  +.+++.+..    
T Consensus        97 e~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~---~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip  173 (323)
T KOG0594|consen   97 EFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHS---HGILHRDLKPQNLLISSSGVLKLADFGLARAFSIP  173 (323)
T ss_pred             EeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCcceEEECCCCcEeeeccchHHHhcCC
Confidence              2                             8899999999   99999999999999999943  444332221    


Q ss_pred             --cccccccCcceee
Q 039505          255 --MSTTIAGTAGFLN  267 (342)
Q Consensus       255 --~~~~~~Gt~~y~a  267 (342)
                        .-+..++|.+|.|
T Consensus       174 ~~~yt~evvTlWYRa  188 (323)
T KOG0594|consen  174 MRTYTPEVVTLWYRA  188 (323)
T ss_pred             cccccccEEEeeccC
Confidence              1233568888888

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.65  E-value=2e-16  Score=150.90  Aligned_cols=79  Identities=30%  Similarity=0.380  Sum_probs=57.6

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-------c-----------EE----EeeCC---cEEE-
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-------P-----------IV----ECHVG---ALIT-  211 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-------~-----------Lv----~c~~~---~lv~-  211 (342)
                      +|.  +.||+|+||+||++....+  .||||+++........       +           ++    .+...   ++|+ 
T Consensus         2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E   81 (360)
T cd05627           2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIME   81 (360)
T ss_pred             CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence            455  8999999999999998754  9999998643211100       0           22    22222   3333 


Q ss_pred             -E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC
Q 039505          212 -I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK  243 (342)
Q Consensus       212 -m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~  243 (342)
                       +                          ++.||+|||+   .+|+||||||+|||++.+
T Consensus        82 ~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~---~givHrDLkp~NIli~~~  137 (360)
T cd05627          82 FLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQ---LGFIHRDIKPDNLLLDAK  137 (360)
T ss_pred             CCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCC
Confidence             1                          8899999999   999999999999999987

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.65  E-value=4.5e-16  Score=146.42  Aligned_cols=77  Identities=18%  Similarity=0.330  Sum_probs=56.4

Q ss_pred             cccCcC--CCeeEEEEEECCC--eEEEEEccCCCCCCCc------c-----------E---E-EeeCC---cEEE--E--
Q 039505          165 RVPYKG--GFITVYHGQLVKS--EVAMKMLSPSSSQGHV------P-----------I---V-ECHVG---ALIT--I--  212 (342)
Q Consensus       165 ~~lG~G--~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~------~-----------L---v-~c~~~---~lv~--m--  212 (342)
                      ++||+|  +|++||++....+  .||||+++........      +           +   . +|..+   ++|+  +  
T Consensus         4 ~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~   83 (327)
T cd08227           4 TVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAY   83 (327)
T ss_pred             hhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccCC
Confidence            689999  7899999998655  8999999765321111      0           2   2 23222   3332  1  


Q ss_pred             --------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC
Q 039505          213 --------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS  244 (342)
Q Consensus       213 --------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a  244 (342)
                                                ++.||+|||+   .+|+||||||+|||++.+.
T Consensus        84 ~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiH~dlkp~Nil~~~~~  138 (327)
T cd08227          84 GSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDG  138 (327)
T ss_pred             CcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCChhhEEEecCC
Confidence                                      8899999999   9999999999999999873

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.65  E-value=5.8e-16  Score=141.22  Aligned_cols=160  Identities=17%  Similarity=0.228  Sum_probs=98.1

Q ss_pred             cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCCCc--------------c--------------EE-EeeCC---cEE
Q 039505          165 RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQGHV--------------P--------------IV-ECHVG---ALI  210 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~~~--------------~--------------Lv-~c~~~---~lv  210 (342)
                      +.||+|+||.||+|.... + .||+|.++........              +              ++ +|...   ++|
T Consensus         7 ~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   86 (272)
T cd06629           7 ELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEYLSIF   86 (272)
T ss_pred             ceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCceEEE
Confidence            789999999999998764 4 8999988643211100              0              23 44333   333


Q ss_pred             E--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------
Q 039505          211 T--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------  254 (342)
Q Consensus       211 ~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------  254 (342)
                      +  +                          ++.||.|||+   .+++||||||+||+++++  .++.+++....      
T Consensus        87 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~  163 (272)
T cd06629          87 LEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHS---KGILHRDLKADNLLVDADGICKISDFGISKKSDDIYD  163 (272)
T ss_pred             EecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhh---CCeeecCCChhhEEEcCCCeEEEeecccccccccccc
Confidence            3  1                          8899999999   899999999999999987  33333222111      


Q ss_pred             --cccccccCcceee----------------------------cCCCCcccccccccccccc--cccccccCCCCCChHH
Q 039505          255 --MSTTIAGTAGFLN----------------------------TKNPVISKSIENGNSHLRD--KSTVDLSFKGEFDIIS  302 (342)
Q Consensus       255 --~~~~~~Gt~~y~a----------------------------tG~~P~~~~~~~~~~~l~~--~~~~d~~l~~~~~~~~  302 (342)
                        ......|+..|+|                            +|+.|+.......  .+.+  .....+.+........
T Consensus       164 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  241 (272)
T cd06629         164 NDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIA--AMFKLGNKRSAPPIPPDVSMNL  241 (272)
T ss_pred             ccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHH--HHHHhhccccCCcCCccccccC
Confidence              0112345555655                            6666664322111  0100  0111111111122233


Q ss_pred             HHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          303 VGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       303 ~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ...+.+++..||+.+|++||++.+|++
T Consensus       242 ~~~~~~li~~~l~~~p~~Rps~~~il~  268 (272)
T cd06629         242 SPVALDFLNACFTINPDNRPTARELLQ  268 (272)
T ss_pred             CHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence            466888999999999999999999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.65  E-value=9.3e-16  Score=143.08  Aligned_cols=100  Identities=19%  Similarity=0.209  Sum_probs=65.3

Q ss_pred             cccCcCCCeeEEEEEECCC----eEEEEEccCCCCCC--Ccc--------------EE-EeeC--C---cEEE--E----
Q 039505          165 RVPYKGGFITVYHGQLVKS----EVAMKMLSPSSSQG--HVP--------------IV-ECHV--G---ALIT--I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~----~vAVK~l~~~~~~~--~~~--------------Lv-~c~~--~---~lv~--m----  212 (342)
                      ..||+|+||+||+|+..++    .||+|.+.......  ..+              +. ++..  +   ++++  +    
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~~l   86 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEHDL   86 (317)
T ss_pred             eEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCCcH
Confidence            6899999999999997642    89999987543211  111              22 2211  1   2222  1    


Q ss_pred             ------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecC----C--CccccCCCCCc--
Q 039505          213 ------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNE----K--SRISPVEGGTH--  254 (342)
Q Consensus       213 ------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~----~--a~~~~~~~~~~--  254 (342)
                                                    +++||+|||+   .+|+||||||+|||++.    +  .++.+++....  
T Consensus        87 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~  163 (317)
T cd07867          87 WHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN  163 (317)
T ss_pred             HHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccC
Confidence                                          8899999999   99999999999999943    2  34444433211  


Q ss_pred             -------cccccccCcceee
Q 039505          255 -------MSTTIAGTAGFLN  267 (342)
Q Consensus       255 -------~~~~~~Gt~~y~a  267 (342)
                             ......||+.|+|
T Consensus       164 ~~~~~~~~~~~~~~t~~y~a  183 (317)
T cd07867         164 SPLKPLADLDPVVVTFWYRA  183 (317)
T ss_pred             CCcccccccCcceecccccC
Confidence                   1123467888887

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.65  E-value=4.7e-16  Score=145.39  Aligned_cols=116  Identities=15%  Similarity=0.156  Sum_probs=73.1

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCcc--------ccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHM--------STTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~~--------~~~~~Gt~~y~a---------------  267 (342)
                      ++.||.|||+   .+++||||||+|||++++.  ++.+++.....        .....++..|+|               
T Consensus       143 i~~aL~~lH~---~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di  219 (314)
T cd05099         143 VARGMEYLES---RRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDV  219 (314)
T ss_pred             HHHHHHHHHH---CCeeeccccceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchh
Confidence            7789999999   9999999999999999884  33333322111        011123345766               


Q ss_pred             -----------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhcc
Q 039505          268 -----------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       268 -----------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                                 | |..|+.......   +..  .+........+.....++.+++.+||+.+|++|||+.++++.|+++.
T Consensus       220 wslG~~l~el~~~g~~p~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~  294 (314)
T cd05099         220 WSFGILMWEIFTLGGSPYPGIPVEE---LFK--LLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVL  294 (314)
T ss_pred             hHHHHHHHHHHhCCCCCCCCCCHHH---HHH--HHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence                       3 566654332111   000  00000011122334456889999999999999999999999999876


Q ss_pred             C
Q 039505          336 G  336 (342)
Q Consensus       336 ~  336 (342)
                      .
T Consensus       295 ~  295 (314)
T cd05099         295 A  295 (314)
T ss_pred             H
Confidence            4

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.65  E-value=9.3e-16  Score=138.96  Aligned_cols=160  Identities=24%  Similarity=0.266  Sum_probs=100.3

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc----------------EE----EeeCC---cEEE--E-----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP----------------IV----ECHVG---ALIT--I-----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~----------------Lv----~c~~~---~lv~--m-----  212 (342)
                      +.||.|+||+||+|....+  .+|+|++..........                ++    .+..+   ++++  +     
T Consensus         7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l   86 (267)
T cd06610           7 EVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSL   86 (267)
T ss_pred             eeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccCCCcH
Confidence            8899999999999997654  89999987543221110                22    12111   2222  1     


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc----------cc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH----------MS  256 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~----------~~  256 (342)
                                              ++.||+|||+   .+++||||||+||+++++.  ++.+++....          ..
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~---~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~  163 (267)
T cd06610          87 LDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHS---NGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVR  163 (267)
T ss_pred             HHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcccccccc
Confidence                                    8899999999   9999999999999999883  3333221110          11


Q ss_pred             cccccCcceee---------------------------cCCCCcccccccccccccc-cccccccCCCCC-ChHHHHHHH
Q 039505          257 TTIAGTAGFLN---------------------------TKNPVISKSIENGNSHLRD-KSTVDLSFKGEF-DIISVGKAV  307 (342)
Q Consensus       257 ~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~l~~~~-~~~~~~~l~  307 (342)
                      ....|+..|++                           ||+.|+.......  .+.+ .....+.+.... .......+.
T Consensus       164 ~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (267)
T cd06610         164 KTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK--VLMLTLQNDPPSLETGADYKKYSKSFR  241 (267)
T ss_pred             ccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh--hHHHHhcCCCCCcCCccccccccHHHH
Confidence            22356777776                           7888876543221  1111 001111111111 123345688


Q ss_pred             HHHHHcccccCCCCCCHHHHHH
Q 039505          308 EIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       308 ~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      +++..||+.+|++||++.++++
T Consensus       242 ~li~~~l~~~p~~Rp~~~~ll~  263 (267)
T cd06610         242 KMISLCLQKDPSKRPTAEELLK  263 (267)
T ss_pred             HHHHHHcCCChhhCcCHHHHhh
Confidence            9999999999999999999875

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.65  E-value=3e-16  Score=145.34  Aligned_cols=161  Identities=16%  Similarity=0.147  Sum_probs=98.8

Q ss_pred             cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCCCcc--------------------EE-EeeCC---cEEE--E----
Q 039505          165 RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQGHVP--------------------IV-ECHVG---ALIT--I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~~~~--------------------Lv-~c~~~---~lv~--m----  212 (342)
                      +.||+|+||.||+|.+.. + .||||.++.........                    ++ +|..+   ++++  +    
T Consensus        21 ~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~l  100 (296)
T cd06618          21 GEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMSTCL  100 (296)
T ss_pred             eEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeeccCcCH
Confidence            899999999999999986 4 99999997543221110                    23 44333   3333  1    


Q ss_pred             ----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-----cccccccCc
Q 039505          213 ----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-----MSTTIAGTA  263 (342)
Q Consensus       213 ----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-----~~~~~~Gt~  263 (342)
                                            +++||+|||+.  .+|+||||||+||+++++  .++.+++....     ......++.
T Consensus       101 ~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~  178 (296)
T cd06618         101 DKLLKRIQGPIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKTRSAGCA  178 (296)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhh--CCEecCCCcHHHEEEcCCCCEEECccccchhccCCCcccCCCCCc
Confidence                                  88999999972  589999999999999988  34444332211     011123445


Q ss_pred             ceee------------------------------cCCCCcccccccccccccccccccccCCC-CCChHHHHHHHHHHHH
Q 039505          264 GFLN------------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKG-EFDIISVGKAVEIAMA  312 (342)
Q Consensus       264 ~y~a------------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~-~~~~~~~~~l~~l~~~  312 (342)
                      .|+|                              +|+.|+.......  ... ..+.+..... ........++.+++.+
T Consensus       179 ~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~  255 (296)
T cd06618         179 AYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEF--EVL-TKILQEEPPSLPPNEGFSPDFCSFVDL  255 (296)
T ss_pred             cccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHH--HHH-HHHhcCCCCCCCCCCCCCHHHHHHHHH
Confidence            5544                              6777765422111  000 0111111100 1111234568899999


Q ss_pred             cccccCCCCCCHHHHHHH
Q 039505          313 SVSSKVNRRPLMNQVVMV  330 (342)
Q Consensus       313 Cl~~~P~~RPsm~eV~~~  330 (342)
                      ||+.+|++||++.++++.
T Consensus       256 ~l~~~p~~Rp~~~~il~~  273 (296)
T cd06618         256 CLTKDHRKRPKYRELLQH  273 (296)
T ss_pred             HccCChhhCCCHHHHhcC
Confidence            999999999999999753

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.64  E-value=2.1e-16  Score=145.72  Aligned_cols=172  Identities=20%  Similarity=0.192  Sum_probs=106.9

Q ss_pred             CCHHHHHHHhhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC---cc---------------EE-EeeCC
Q 039505          151 NALELSLRVTNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH---VP---------------IV-ECHVG  207 (342)
Q Consensus       151 ~~~~~l~~at~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~---~~---------------Lv-~c~~~  207 (342)
                      ++.+++.+++++|.  +.||+|+||.||++....+  .+|+|++........   .+               ++ +|...
T Consensus        12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~   91 (291)
T cd06639          12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKA   91 (291)
T ss_pred             hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence            44566677788888  8999999999999998654  899999865321100   00               22 33211


Q ss_pred             --------cEEE--E------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--Cc
Q 039505          208 --------ALIT--I------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SR  245 (342)
Q Consensus       208 --------~lv~--m------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~  245 (342)
                              ++++  +                              ++.||+|||+   .+++||||||+||+++++  .+
T Consensus        92 ~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~nili~~~~~~k  168 (291)
T cd06639          92 DKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHN---NRIIHRDVKGNNILLTTEGGVK  168 (291)
T ss_pred             cccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCCEE
Confidence                    2222  1                              7889999999   899999999999999987  34


Q ss_pred             cccCCCCCc------cccccccCcceee-------------------------------cCCCCcccccccccccccc-c
Q 039505          246 ISPVEGGTH------MSTTIAGTAGFLN-------------------------------TKNPVISKSIENGNSHLRD-K  287 (342)
Q Consensus       246 ~~~~~~~~~------~~~~~~Gt~~y~a-------------------------------tG~~P~~~~~~~~~~~l~~-~  287 (342)
                      +.+++....      ......|+..|+|                               ||+.|+.......  .+.. .
T Consensus       169 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~--~~~~~~  246 (291)
T cd06639         169 LVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVK--TLFKIP  246 (291)
T ss_pred             EeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHH--HHHHHh
Confidence            443332211      1112345555555                               6666665432211  1100 0


Q ss_pred             ccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          288 STVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       288 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ....+.+.  .+......+.+++.+||+.+|++||++.|+++
T Consensus       247 ~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~  286 (291)
T cd06639         247 RNPPPTLL--HPEKWCRSFNHFISQCLIKDFEARPSVTHLLE  286 (291)
T ss_pred             cCCCCCCC--cccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            00001111  11223345889999999999999999999975

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.64  E-value=4.8e-16  Score=140.39  Aligned_cols=161  Identities=15%  Similarity=0.158  Sum_probs=101.4

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc-----------------EE----Eee-CC----cEEE--E--
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP-----------------IV----ECH-VG----ALIT--I--  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~-----------------Lv----~c~-~~----~lv~--m--  212 (342)
                      +.||+|+||.||++....+  .+|+|+++.........                 ++    ++. ..    ++++  +  
T Consensus         6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~   85 (265)
T cd08217           6 ETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEG   85 (265)
T ss_pred             eeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhccC
Confidence            7899999999999987654  89999986543211110                 22    221 11    2222  1  


Q ss_pred             ----------------------------ehhhhhhhhccC--CCCeeeCCCCcceEEecCCC--ccccCCCCCcc-----
Q 039505          213 ----------------------------PKEGLEYLHQGL--KHPIIQRDMKSTNILLNEKS--RISPVEGGTHM-----  255 (342)
Q Consensus       213 ----------------------------ia~gL~yLH~~~--~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~~-----  255 (342)
                                                  ++.||+|||..+  ..+++||||||+||+++++.  ++.+++.....     
T Consensus        86 ~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~  165 (265)
T cd08217          86 GDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSS  165 (265)
T ss_pred             CCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccccCCcc
Confidence                                        889999999322  38999999999999999873  33333221110     


Q ss_pred             -ccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHH
Q 039505          256 -STTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVE  308 (342)
Q Consensus       256 -~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~  308 (342)
                       .....|+..|+|                          +|+.|+.......   +.+ .+.+. .....+......+.+
T Consensus       166 ~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~---~~~-~~~~~-~~~~~~~~~~~~~~~  240 (265)
T cd08217         166 FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQ---LAS-KIKEG-KFRRIPYRYSSELNE  240 (265)
T ss_pred             cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHH---HHH-HHhcC-CCCCCccccCHHHHH
Confidence             122456777776                          7888877543111   111 11111 111223334456889


Q ss_pred             HHHHcccccCCCCCCHHHHHHH
Q 039505          309 IAMASVSSKVNRRPLMNQVVMV  330 (342)
Q Consensus       309 l~~~Cl~~~P~~RPsm~eV~~~  330 (342)
                      ++.+|++.+|++||++.+|++.
T Consensus       241 l~~~~l~~~p~~Rp~~~~il~~  262 (265)
T cd08217         241 VIKSMLNVDPDKRPSTEELLQL  262 (265)
T ss_pred             HHHHHccCCcccCCCHHHHhhC
Confidence            9999999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.64  E-value=5.7e-16  Score=141.53  Aligned_cols=158  Identities=22%  Similarity=0.283  Sum_probs=100.9

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-----c--------------EE-EeeCC---cEEE--E-----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-----P--------------IV-ECHVG---ALIT--I-----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-----~--------------Lv-~c~~~---~lv~--m-----  212 (342)
                      +.||.|+||.||+|....+  .||+|.+.........     +              +. ++.++   ++++  +     
T Consensus         7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   86 (274)
T cd06609           7 ECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSC   86 (274)
T ss_pred             hhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeCCCcH
Confidence            7899999999999998754  9999998754321110     0              22 33222   3443  1     


Q ss_pred             --------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc------cccccccCcc
Q 039505          213 --------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH------MSTTIAGTAG  264 (342)
Q Consensus       213 --------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~------~~~~~~Gt~~  264 (342)
                                          ++.||.|||+   .+++||||+|+||+++++.  ++.+++....      ......|++.
T Consensus        87 ~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~  163 (274)
T cd06609          87 LDLLKPGKLDETYIAFILREVLLGLEYLHE---EGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFVGTPF  163 (274)
T ss_pred             HHHHhhcCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEcccccceeecccccccccccCCcc
Confidence                                8899999999   8999999999999999883  3333222111      1122456777


Q ss_pred             eee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccC
Q 039505          265 FLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKV  318 (342)
Q Consensus       265 y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P  318 (342)
                      |++                          ||+.|+...........+ .....+.+...   .....+.+++.+||..+|
T Consensus       164 y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~l~~~l~~~p  239 (274)
T cd06609         164 WMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLI-PKNNPPSLEGN---KFSKPFKDFVSLCLNKDP  239 (274)
T ss_pred             ccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHh-hhcCCCCCccc---ccCHHHHHHHHHHhhCCh
Confidence            776                          888888654322100000 01111111111   134458889999999999


Q ss_pred             CCCCCHHHHHH
Q 039505          319 NRRPLMNQVVM  329 (342)
Q Consensus       319 ~~RPsm~eV~~  329 (342)
                      ++|||++++++
T Consensus       240 ~~Rpt~~~il~  250 (274)
T cd06609         240 KERPSAKELLK  250 (274)
T ss_pred             hhCcCHHHHhh
Confidence            99999999975

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.64  E-value=3.4e-16  Score=151.69  Aligned_cols=164  Identities=13%  Similarity=0.158  Sum_probs=116.3

Q ss_pred             cccCcCCCeeEEEEEEC---CC---eEEEEEccCCCCCCCcc-------------------EE-EeeCC--cEEE-E---
Q 039505          165 RVPYKGGFITVYHGQLV---KS---EVAMKMLSPSSSQGHVP-------------------IV-ECHVG--ALIT-I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~---~~---~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~--~lv~-m---  212 (342)
                      ++||+|.||.||+|...   .+   .||||..+.+...+..+                   |+ .|.+.  .+|+ +   
T Consensus       395 r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P~WivmEL~~~  474 (974)
T KOG4257|consen  395 RLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQPMWIVMELAPL  474 (974)
T ss_pred             HhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeeccceeEEEecccc
Confidence            79999999999999863   23   79999998865444343                   77 88776  4444 2   


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCccc-------cc
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHMS-------TT  258 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~~-------~~  258 (342)
                                               ++.||+|||+   .+.|||||-..|||+...  .|+.+++.+....       +.
T Consensus       475 GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeS---krfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS~  551 (974)
T KOG4257|consen  475 GELREYLQQNKDSLPLRTLTLYCYQICTALAYLES---KRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKASR  551 (974)
T ss_pred             hhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHh---hchhhhhhhhhheeecCcceeeecccchhhhccccchhhccc
Confidence                                     8999999999   999999999999999988  5555554332211       11


Q ss_pred             cccCcceee---------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHH
Q 039505          259 IAGTAGFLN---------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAM  311 (342)
Q Consensus       259 ~~Gt~~y~a---------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~  311 (342)
                      ..-.+-|||                           -|..||.......  -   ...+...-+.+.++.|+..+..++.
T Consensus       552 ~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsD--V---I~~iEnGeRlP~P~nCPp~LYslms  626 (974)
T KOG4257|consen  552 GKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSD--V---IGHIENGERLPCPPNCPPALYSLMS  626 (974)
T ss_pred             cccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccc--e---EEEecCCCCCCCCCCCChHHHHHHH
Confidence            122234555                           6777776543322  0   1112222233456778888999999


Q ss_pred             HcccccCCCCCCHHHHHHHHHhccC
Q 039505          312 ASVSSKVNRRPLMNQVVMVREQGNG  336 (342)
Q Consensus       312 ~Cl~~~P~~RPsm~eV~~~L~~i~~  336 (342)
                      +||+.+|.+||.+.|+...|+.+..
T Consensus       627 kcWayeP~kRPrftei~~~lsdv~q  651 (974)
T KOG4257|consen  627 KCWAYEPSKRPRFTEIKAILSDVLQ  651 (974)
T ss_pred             HHhccCcccCCcHHHHHHHHHHHHH
Confidence            9999999999999999988877643

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.64  E-value=9.7e-16  Score=150.79  Aligned_cols=101  Identities=25%  Similarity=0.285  Sum_probs=70.3

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc--------------EE-EeeCC---cEEE--E-----
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP--------------IV-ECHVG---ALIT--I-----  212 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~--------------Lv-~c~~~---~lv~--m-----  212 (342)
                      +|.  +.||+|+||.||+|.+...  .||||.......  ..+              ++ +|..+   ++++  +     
T Consensus       170 gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~~~~--~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~~~L~  247 (461)
T PHA03211        170 GFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWYASS--VHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYRSDLY  247 (461)
T ss_pred             CeEEEEEEccCCCeEEEEEEECCCCCEEEEecccccCH--HHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccCCCHH
Confidence            455  8899999999999999765  899996432211  111              33 43333   3333  1     


Q ss_pred             ---------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc--------ccccccc
Q 039505          213 ---------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH--------MSTTIAG  261 (342)
Q Consensus       213 ---------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~--------~~~~~~G  261 (342)
                                           +++||+|||+   .+|+||||||+|||++.+  .++.+++....        ......|
T Consensus       248 ~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~G  324 (461)
T PHA03211        248 TYLGARLRPLGLAQVTAVARQLLSAIDYIHG---EGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAG  324 (461)
T ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCEEECcCCHHHEEECCCCCEEEcccCCceecccccccccccccCC
Confidence                                 8899999999   999999999999999987  44444433211        1123569


Q ss_pred             Ccceee
Q 039505          262 TAGFLN  267 (342)
Q Consensus       262 t~~y~a  267 (342)
                      |..|+|
T Consensus       325 T~~Y~A  330 (461)
T PHA03211        325 TVDTNA  330 (461)
T ss_pred             CcCCcC
Confidence            999998

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.64  E-value=1.1e-15  Score=139.07  Aligned_cols=158  Identities=19%  Similarity=0.278  Sum_probs=97.8

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCC--Cc-------c-----------EE----EeeC--C---c
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQG--HV-------P-----------IV----ECHV--G---A  208 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~--~~-------~-----------Lv----~c~~--~---~  208 (342)
                      +|.  +.||+|+||.||+|....+  .||+|++.......  .+       +           ++    ++..  .   .
T Consensus         3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   82 (266)
T cd06651           3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT   82 (266)
T ss_pred             CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence            555  8999999999999998654  99999886542211  10       1           32    2222  1   2


Q ss_pred             EEE--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc----
Q 039505          209 LIT--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH----  254 (342)
Q Consensus       209 lv~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~----  254 (342)
                      +++  +                          +++||+|||+   .+|+||||||+||+++.+  .++.+++....    
T Consensus        83 l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~---~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~  159 (266)
T cd06651          83 IFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTI  159 (266)
T ss_pred             EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccCCCccccccc
Confidence            232  1                          8899999999   899999999999999987  34444332211    


Q ss_pred             -----cccccccCcceee--------------------------cCCCCcccccccccccccc--cccccccCCCCCChH
Q 039505          255 -----MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRD--KSTVDLSFKGEFDII  301 (342)
Q Consensus       255 -----~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~--~~~~d~~l~~~~~~~  301 (342)
                           ......++.+|+|                          ||+.|+.......  .+..  .....+.+    +..
T Consensus       160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~--~~~~~~~~~~~~~~----~~~  233 (266)
T cd06651         160 CMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMA--AIFKIATQPTNPQL----PSH  233 (266)
T ss_pred             cccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHH--HHHHHhcCCCCCCC----chh
Confidence                 0112446777777                          7888876432111  1100  11111222    222


Q ss_pred             HHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          302 SVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       302 ~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ....+.+++ .||..+|++||+|+||++
T Consensus       234 ~~~~~~~li-~~~~~~p~~Rp~~~eil~  260 (266)
T cd06651         234 ISEHARDFL-GCIFVEARHRPSAEELLR  260 (266)
T ss_pred             cCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence            233344554 788899999999999975

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.64  E-value=6.8e-16  Score=145.60  Aligned_cols=116  Identities=16%  Similarity=0.152  Sum_probs=74.2

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc--------ccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM--------STTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~--------~~~~~Gt~~y~a---------------  267 (342)
                      +++||+|||+   .+++||||||+|||++++  .++.+++.....        .....++..|+|               
T Consensus       143 i~~al~~LH~---~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di  219 (334)
T cd05100         143 VARGMEYLAS---QKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV  219 (334)
T ss_pred             HHHHHHHHHH---CCeeccccccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhh
Confidence            7789999999   999999999999999987  344443322110        111223456776               


Q ss_pred             -----------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhcc
Q 039505          268 -----------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       268 -----------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                                 + |..|+.......   +.  ..+......+.+......+.+++.+||+.+|++||+|.|+++.|+.+.
T Consensus       220 ~slG~il~el~~~g~~p~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~  294 (334)
T cd05100         220 WSFGVLLWEIFTLGGSPYPGIPVEE---LF--KLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVL  294 (334)
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCHHH---HH--HHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence                       3 566654432111   00  001011111122334456889999999999999999999999999886


Q ss_pred             C
Q 039505          336 G  336 (342)
Q Consensus       336 ~  336 (342)
                      .
T Consensus       295 ~  295 (334)
T cd05100         295 T  295 (334)
T ss_pred             h
Confidence            3

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.64  E-value=1.1e-15  Score=139.63  Aligned_cols=158  Identities=20%  Similarity=0.264  Sum_probs=100.3

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc----------------------EE-EeeCC---cEEE--E--
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP----------------------IV-ECHVG---ALIT--I--  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~----------------------Lv-~c~~~---~lv~--m--  212 (342)
                      +.||+|+||.||+|.+...  .||+|.++........+                      ++ +|..+   ++++  +  
T Consensus         7 ~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~~~   86 (277)
T cd06917           7 ELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAEG   86 (277)
T ss_pred             hheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecCCC
Confidence            7899999999999998544  99999986542211100                      22 33333   3333  1  


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCcc--ccCCCCCc------ccccccc
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI--SPVEGGTH------MSTTIAG  261 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~~--~~~~~~~~------~~~~~~G  261 (342)
                                             +++||.|||+   .+|+||||+|+||+++++..+  .+++....      ......|
T Consensus        87 ~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  163 (277)
T cd06917          87 GSVRTLMKAGPIAEKYISVIIREVLVALKYIHK---VGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVG  163 (277)
T ss_pred             CcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCccccccccC
Confidence                                   8899999999   999999999999999988333  33221111      1122356


Q ss_pred             Ccceee---------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcc
Q 039505          262 TAGFLN---------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASV  314 (342)
Q Consensus       262 t~~y~a---------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl  314 (342)
                      +..|+|                           +|+.|+............ .....+.+...   .....+.+++.+||
T Consensus       164 ~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~i~~~l  239 (277)
T cd06917         164 TPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLI-PKSKPPRLEDN---GYSKLLREFVAACL  239 (277)
T ss_pred             CcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhcc-ccCCCCCCCcc---cCCHHHHHHHHHHc
Confidence            667766                           788887654321100000 01111112111   13456889999999


Q ss_pred             cccCCCCCCHHHHHH
Q 039505          315 SSKVNRRPLMNQVVM  329 (342)
Q Consensus       315 ~~~P~~RPsm~eV~~  329 (342)
                      +.+|++||++.+++.
T Consensus       240 ~~~p~~R~~~~~il~  254 (277)
T cd06917         240 DEEPKERLSAEELLK  254 (277)
T ss_pred             CCCcccCcCHHHHhh
Confidence            999999999999975

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.64  E-value=2.4e-17  Score=154.58  Aligned_cols=163  Identities=26%  Similarity=0.275  Sum_probs=107.9

Q ss_pred             HHHHHh-hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc------------------EE---EeeCC-
Q 039505          155 LSLRVT-NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP------------------IV---ECHVG-  207 (342)
Q Consensus       155 ~l~~at-~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~------------------Lv---~c~~~-  207 (342)
                      |++..| +.|+  ++||+||||.||-++.+.+  .+|.|++.+......+.                  +|   |..+. 
T Consensus       178 E~qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTk  257 (591)
T KOG0986|consen  178 ELQPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETK  257 (591)
T ss_pred             HhhhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCC
Confidence            344455 5677  9999999999999998876  89999886543211111                  22   33332 


Q ss_pred             ---cEEE--E----------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCC
Q 039505          208 ---ALIT--I----------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGG  252 (342)
Q Consensus       208 ---~lv~--m----------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~  252 (342)
                         .||.  |                            |+.||++||+   .+||.||+||+|||||++  .|+.+.+..
T Consensus       258 d~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~---~~iVYRDLKPeNILLDd~GhvRISDLGLA  334 (591)
T KOG0986|consen  258 DALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHR---RRIVYRDLKPENILLDDHGHVRISDLGLA  334 (591)
T ss_pred             CceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHh---cceeeccCChhheeeccCCCeEeeccceE
Confidence               4444  3                            8899999999   999999999999999998  444443322


Q ss_pred             Cc-----cccccccCcceee--------------------------cCCCCcccccccccccccccccccccCC---CCC
Q 039505          253 TH-----MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFK---GEF  298 (342)
Q Consensus       253 ~~-----~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~---~~~  298 (342)
                      ..     ....-+||.||||                          -|+.||....+...     .+-+|.+..   .++
T Consensus       335 vei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk-----~eEvdrr~~~~~~ey  409 (591)
T KOG0986|consen  335 VEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVK-----REEVDRRTLEDPEEY  409 (591)
T ss_pred             EecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhh-----HHHHHHHHhcchhhc
Confidence            21     1223489999999                          67777665433221     223333332   224


Q ss_pred             ChHHHHHHHHHHHHcccccCCCCCCHH
Q 039505          299 DIISVGKAVEIAMASVSSKVNRRPLMN  325 (342)
Q Consensus       299 ~~~~~~~l~~l~~~Cl~~~P~~RPsm~  325 (342)
                      +....+++.++....+++||++|-..+
T Consensus       410 ~~kFS~eakslc~~LL~Kdp~~RLGcr  436 (591)
T KOG0986|consen  410 SDKFSEEAKSLCEGLLTKDPEKRLGCR  436 (591)
T ss_pred             ccccCHHHHHHHHHHHccCHHHhccCC
Confidence            444556677787788899999996543

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.64  E-value=9.5e-16  Score=138.42  Aligned_cols=158  Identities=13%  Similarity=0.212  Sum_probs=94.9

Q ss_pred             cccCcCCCeeEEEEEECCC------------eEEEEEccCCCCCCCc---c--------------EE-EeeCC--cEEE-
Q 039505          165 RVPYKGGFITVYHGQLVKS------------EVAMKMLSPSSSQGHV---P--------------IV-ECHVG--ALIT-  211 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~------------~vAVK~l~~~~~~~~~---~--------------Lv-~c~~~--~lv~-  211 (342)
                      +.||+|+||.||+|.+...            .+++|.+.........   +              ++ +|...  ++++ 
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e   80 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVRDENIMVEE   80 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEecCCcEEEEE
Confidence            4689999999999998643            3788887654432111   0              33 44322  3333 


Q ss_pred             -E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC---------ccccCCCCCc
Q 039505          212 -I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS---------RISPVEGGTH  254 (342)
Q Consensus       212 -m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a---------~~~~~~~~~~  254 (342)
                       +                           ++.||+|||+   .+|+||||||+|||++.+.         ++.+++....
T Consensus        81 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~  157 (259)
T cd05037          81 YVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLED---KKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPIT  157 (259)
T ss_pred             cCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhh---CCeecccCccceEEEecCccccCCceeEEeCCCCcccc
Confidence             1                           8999999999   9999999999999998763         3333332221


Q ss_pred             c--ccccccCcceee----------------------------c-CCCCcccccccccccccccccccccCCCCCChHHH
Q 039505          255 M--STTIAGTAGFLN----------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISV  303 (342)
Q Consensus       255 ~--~~~~~Gt~~y~a----------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~  303 (342)
                      .  .....++..|+|                            + |..|+.......   .. ....++.   ..+....
T Consensus       158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~---~~-~~~~~~~---~~~~~~~  230 (259)
T cd05037         158 VLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSE---KE-RFYQDQH---RLPMPDC  230 (259)
T ss_pred             cccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchh---HH-HHHhcCC---CCCCCCc
Confidence            1  112344555655                            2 233332221000   00 0000000   0111112


Q ss_pred             HHHHHHHHHcccccCCCCCCHHHHHHHHH
Q 039505          304 GKAVEIAMASVSSKVNRRPLMNQVVMVRE  332 (342)
Q Consensus       304 ~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~  332 (342)
                      ..+.+++.+||..+|++|||+.+|++.|+
T Consensus       231 ~~~~~li~~~l~~~p~~Rpt~~~il~~l~  259 (259)
T cd05037         231 AELANLINQCWTYDPTKRPSFRAILRDLN  259 (259)
T ss_pred             hHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            56889999999999999999999998873

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.64  E-value=8.3e-16  Score=143.40  Aligned_cols=167  Identities=15%  Similarity=0.146  Sum_probs=101.3

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC-----cc--------------EE-EeeCC---cEEE--E
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH-----VP--------------IV-ECHVG---ALIT--I  212 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~-----~~--------------Lv-~c~~~---~lv~--m  212 (342)
                      +|.  +.||+|+||.||++.+..+  .+|+|.+........     .+              ++ +|..+   ++++  +
T Consensus         2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~   81 (308)
T cd06615           2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHM   81 (308)
T ss_pred             CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeecc
Confidence            455  8899999999999998755  899998865422111     01              22 33322   3333  1


Q ss_pred             --------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc----cccccc
Q 039505          213 --------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH----MSTTIA  260 (342)
Q Consensus       213 --------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~----~~~~~~  260 (342)
                                                +++||.|||+.  .+++||||||+|||++++  .++.+++....    ......
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~  159 (308)
T cd06615          82 DGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV  159 (308)
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhh--CCEEECCCChHHEEEecCCcEEEccCCCcccccccccccCC
Confidence                                      88999999972  589999999999999988  34444332211    112345


Q ss_pred             cCcceee--------------------------cCCCCcccccccccccccc---cccccc-------------------
Q 039505          261 GTAGFLN--------------------------TKNPVISKSIENGNSHLRD---KSTVDL-------------------  292 (342)
Q Consensus       261 Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~---~~~~d~-------------------  292 (342)
                      |+..|+|                          ||+.|+..........+..   ....++                   
T Consensus       160 ~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (308)
T cd06615         160 GTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAI  239 (308)
T ss_pred             CCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhhH
Confidence            6777766                          8888875432111001110   000000                   


Q ss_pred             ------cC---CCCC-ChHHHHHHHHHHHHcccccCCCCCCHHHHHHH
Q 039505          293 ------SF---KGEF-DIISVGKAVEIAMASVSSKVNRRPLMNQVVMV  330 (342)
Q Consensus       293 ------~l---~~~~-~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~  330 (342)
                            ..   .... .......+.+++.+||+.+|++|||+.+|++.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  287 (308)
T cd06615         240 FELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH  287 (308)
T ss_pred             HHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                  00   0000 00123458899999999999999999999865

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.64  E-value=5.2e-16  Score=141.19  Aligned_cols=113  Identities=15%  Similarity=0.156  Sum_probs=71.1

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCCC-------ccccCCCCCcc--------ccccccCcceee----------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS-------RISPVEGGTHM--------STTIAGTAGFLN----------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a-------~~~~~~~~~~~--------~~~~~Gt~~y~a----------  267 (342)
                      ++.||+|||+   .+++|+||||+||+++.+.       ++.+++.....        .....++..|+|          
T Consensus       115 l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  191 (269)
T cd05044         115 VAKGCVYLEQ---MHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFT  191 (269)
T ss_pred             HHHHHHHHHh---CCcccCCCChheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccCHHHHccCCcc
Confidence            7889999999   8999999999999999753       33333221110        111233455665          


Q ss_pred             ----------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHH
Q 039505          268 ----------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMV  330 (342)
Q Consensus       268 ----------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~  330 (342)
                                      | |+.|+.......   ..  ..++.......+...+..+.+++.+||+.+|++||++.+|++.
T Consensus       192 ~~~Dv~slG~il~ellt~g~~p~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~  266 (269)
T cd05044         192 TQSDVWSFGVLMWEILTLGQQPYPALNNQE---VL--QHVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEI  266 (269)
T ss_pred             cchhHHHHHHHHHHHHHcCCCCCcccCHHH---HH--HHHhcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence                            4 777765432111   00  0011111111223345668899999999999999999999999


Q ss_pred             HHh
Q 039505          331 REQ  333 (342)
Q Consensus       331 L~~  333 (342)
                      |++
T Consensus       267 l~~  269 (269)
T cd05044         267 LQN  269 (269)
T ss_pred             HhC
Confidence            874

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.64  E-value=1.1e-15  Score=143.18  Aligned_cols=161  Identities=21%  Similarity=0.223  Sum_probs=100.4

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-------c--------------EE-EeeCC---cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-------P--------------IV-ECHVG---ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-------~--------------Lv-~c~~~---~lv~--m---  212 (342)
                      +.||+|+||.||+|+...+  .||+|++........+       +              ++ +|..+   ++++  +   
T Consensus        31 ~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g~  110 (317)
T cd06635          31 REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCLGS  110 (317)
T ss_pred             heeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCCCCC
Confidence            7899999999999998654  9999998754322111       0              22 44333   3333  1   


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc--cccccccCcce
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH--MSTTIAGTAGF  265 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~--~~~~~~Gt~~y  265 (342)
                                             ++.||.|||+   .+|+||||||+||+++.+.  ++.+++....  ......|++.|
T Consensus       111 l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~---~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~y  187 (317)
T cd06635         111 ASDLLEVHKKPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVGTPYW  187 (317)
T ss_pred             HHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcccEEECCCCCEEEecCCCccccCCcccccCCccc
Confidence                                   7899999999   9999999999999999873  3333322111  11123455556


Q ss_pred             ee-----------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccc
Q 039505          266 LN-----------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSS  316 (342)
Q Consensus       266 ~a-----------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~  316 (342)
                      +|                             +|+.|+.......  .+  ..+................+.+++.+||+.
T Consensus       188 ~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  263 (317)
T cd06635         188 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS--AL--YHIAQNESPTLQSNEWSDYFRNFVDSCLQK  263 (317)
T ss_pred             cChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHH--HH--HHHHhccCCCCCCccccHHHHHHHHHHccC
Confidence            55                             6666654432111  00  001111111111222344588899999999


Q ss_pred             cCCCCCCHHHHHHHHH
Q 039505          317 KVNRRPLMNQVVMVRE  332 (342)
Q Consensus       317 ~P~~RPsm~eV~~~L~  332 (342)
                      +|++||++.+|++.+-
T Consensus       264 ~p~~Rpt~~~il~~~~  279 (317)
T cd06635         264 IPQDRPTSEELLKHMF  279 (317)
T ss_pred             CcccCcCHHHHHhChh
Confidence            9999999999987543

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.64  E-value=8e-16  Score=138.86  Aligned_cols=157  Identities=20%  Similarity=0.259  Sum_probs=100.4

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc------c-----------EE----Eee-CC---cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV------P-----------IV----ECH-VG---ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~------~-----------Lv----~c~-~~---~lv~--m---  212 (342)
                      +.||+|++|.||++....+  .||+|++.........      +           ++    .+. ..   ++++  +   
T Consensus         6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~   85 (257)
T cd08223           6 RVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCEGG   85 (257)
T ss_pred             EEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecccCCC
Confidence            7899999999999998755  8999998654321111      0           22    221 11   2333  1   


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCcc--ccCCCCC------cccccc
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI--SPVEGGT------HMSTTI  259 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~~--~~~~~~~------~~~~~~  259 (342)
                                               ++.||+|||+   .+++||||||+||+++++..+  .+++...      ......
T Consensus        86 ~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~---~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~  162 (257)
T cd08223          86 DLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHE---KHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMASTL  162 (257)
T ss_pred             cHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCchhEEEecCCcEEEecccceEEecccCCccccc
Confidence                                     8889999999   899999999999999987333  3222111      111234


Q ss_pred             ccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHc
Q 039505          260 AGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMAS  313 (342)
Q Consensus       260 ~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~C  313 (342)
                      .|++.|+|                          ||+.|++......   ... ......+ ...+......+.+++.+|
T Consensus       163 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~---~~~-~~~~~~~-~~~~~~~~~~~~~li~~~  237 (257)
T cd08223         163 IGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNS---LVY-RIIEGKL-PPMPKDYSPELGELIATM  237 (257)
T ss_pred             cCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH---HHH-HHHhcCC-CCCccccCHHHHHHHHHH
Confidence            57777777                          7887776432111   000 0111011 112233445688999999


Q ss_pred             ccccCCCCCCHHHHHH
Q 039505          314 VSSKVNRRPLMNQVVM  329 (342)
Q Consensus       314 l~~~P~~RPsm~eV~~  329 (342)
                      ++.+|++||++.++++
T Consensus       238 l~~~p~~Rp~~~~~l~  253 (257)
T cd08223         238 LSKRPEKRPSVKSILR  253 (257)
T ss_pred             hccCcccCCCHHHHhc
Confidence            9999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.64  E-value=9.9e-16  Score=142.65  Aligned_cols=159  Identities=21%  Similarity=0.234  Sum_probs=98.6

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-------c--------------EE-EeeCC---cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-------P--------------IV-ECHVG---ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-------~--------------Lv-~c~~~---~lv~--m---  212 (342)
                      +.||+|+||+||+|....+  .||+|++.........       +              +. +|..+   ++|+  +   
T Consensus        21 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~g~  100 (307)
T cd06607          21 REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCLGS  100 (307)
T ss_pred             eeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHHhhCCC
Confidence            7899999999999998644  9999998644322111       1              22 44333   3333  1   


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCcc--ccccccCcce
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHM--STTIAGTAGF  265 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~~--~~~~~Gt~~y  265 (342)
                                             ++.||.|||+   .+|+||||+|+||+++++.  ++.+++.....  .....|+..|
T Consensus       101 l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~---~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~~~~~~~y  177 (307)
T cd06607         101 ASDILEVHKKPLQEVEIAAICHGALQGLAYLHS---HERIHRDIKAGNILLTEPGTVKLADFGSASLVSPANSFVGTPYW  177 (307)
T ss_pred             HHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEECCCCCEEEeecCcceecCCCCCccCCccc
Confidence                                   8899999999   8999999999999999883  33333222111  1123455555


Q ss_pred             ee-----------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccc
Q 039505          266 LN-----------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSS  316 (342)
Q Consensus       266 ~a-----------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~  316 (342)
                      +|                             ||+.|+.......  ...  .+................+.+++.+||+.
T Consensus       178 ~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~li~~~l~~  253 (307)
T cd06607         178 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS--ALY--HIAQNDSPTLSSNDWSDYFRNFVDSCLQK  253 (307)
T ss_pred             cCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHH--HHH--HHhcCCCCCCCchhhCHHHHHHHHHHhcC
Confidence            55                             6666654332111  000  00000000111223445688999999999


Q ss_pred             cCCCCCCHHHHHHH
Q 039505          317 KVNRRPLMNQVVMV  330 (342)
Q Consensus       317 ~P~~RPsm~eV~~~  330 (342)
                      +|++||++.+|+..
T Consensus       254 ~p~~Rp~~~~il~~  267 (307)
T cd06607         254 IPQDRPSSEELLKH  267 (307)
T ss_pred             ChhhCcCHHHHhcC
Confidence            99999999999763

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.63  E-value=6.4e-16  Score=141.81  Aligned_cols=171  Identities=21%  Similarity=0.224  Sum_probs=105.5

Q ss_pred             CHHHHHHHhhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc---c------------EE----EeeC--
Q 039505          152 ALELSLRVTNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV---P------------IV----ECHV--  206 (342)
Q Consensus       152 ~~~~l~~at~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~---~------------Lv----~c~~--  206 (342)
                      ++.++..+.+.|.  +.||+|+||.||+|.....  .+|+|++.........   +            ++    ++..  
T Consensus         7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~   86 (282)
T cd06636           7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKS   86 (282)
T ss_pred             hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhccc
Confidence            4555556667777  8999999999999998654  8999988654211110   0            22    2210  


Q ss_pred             ----C---cEEE--E----------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCc--cc
Q 039505          207 ----G---ALIT--I----------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSR--IS  247 (342)
Q Consensus       207 ----~---~lv~--m----------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~--~~  247 (342)
                          .   ++++  +                            +++||+|||+   .+|+||||||+||+++++..  +.
T Consensus        87 ~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dl~~~nili~~~~~~~l~  163 (282)
T cd06636          87 PPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHA---HKVIHRDIKGQNVLLTENAEVKLV  163 (282)
T ss_pred             ccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEe
Confidence                1   2222  1                            8899999999   99999999999999998843  33


Q ss_pred             cCCCCCc------cccccccCcceee-------------------------------cCCCCcccccccccccccccccc
Q 039505          248 PVEGGTH------MSTTIAGTAGFLN-------------------------------TKNPVISKSIENGNSHLRDKSTV  290 (342)
Q Consensus       248 ~~~~~~~------~~~~~~Gt~~y~a-------------------------------tG~~P~~~~~~~~~~~l~~~~~~  290 (342)
                      +++....      ......|++.|+|                               ||+.|+.......  .+.  ...
T Consensus       164 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~--~~~--~~~  239 (282)
T cd06636         164 DFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMR--ALF--LIP  239 (282)
T ss_pred             eCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHh--hhh--hHh
Confidence            3322211      1122456666665                               5666664332111  000  000


Q ss_pred             cccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          291 DLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       291 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ...............+.+++.+||+.+|.+||++.|+++
T Consensus       240 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~  278 (282)
T cd06636         240 RNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK  278 (282)
T ss_pred             hCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence            000001111223456889999999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.63  E-value=2.4e-16  Score=163.02  Aligned_cols=167  Identities=19%  Similarity=0.247  Sum_probs=117.3

Q ss_pred             CcccCcCCCeeEEEEEECCC-------eEEEEEccCCCCCCCcc-------------------EE-EeeCC---cEEE--
Q 039505          164 ERVPYKGGFITVYHGQLVKS-------EVAMKMLSPSSSQGHVP-------------------IV-ECHVG---ALIT--  211 (342)
Q Consensus       164 ~~~lG~G~fG~Vykg~~~~~-------~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~---~lv~--  211 (342)
                      .+.||+|+||.||.|...+.       .||||.++........+                   ++ .|...   +++.  
T Consensus       697 ~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~ley  776 (1025)
T KOG1095|consen  697 LRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILLEY  776 (1025)
T ss_pred             eeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEehh
Confidence            38999999999999998653       39999998775444333                   55 56554   3333  


Q ss_pred             E---------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCccc
Q 039505          212 I---------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHMS  256 (342)
Q Consensus       212 m---------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~~  256 (342)
                      |                                 ||+|+.||++   .+.|||||-..|+||++.  +|+.+++.....-
T Consensus       777 M~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~---~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy  853 (1025)
T KOG1095|consen  777 MEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES---KHFVHRDLAARNCLLDERRVVKIADFGLARDIY  853 (1025)
T ss_pred             cccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh---CCCcCcchhhhheeecccCcEEEcccchhHhhh
Confidence            5                                 9999999999   999999999999999999  6666655433111


Q ss_pred             c----cccc----Ccceee---------------------------cCCCCcccccccccccccccccccccCCCCCChH
Q 039505          257 T----TIAG----TAGFLN---------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDII  301 (342)
Q Consensus       257 ~----~~~G----t~~y~a---------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~  301 (342)
                      .    ...|    -..|||                           -|..||...........    ++... +-+.+..
T Consensus       854 ~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~----~~~gg-RL~~P~~  928 (1025)
T KOG1095|consen  854 DKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLD----VLEGG-RLDPPSY  928 (1025)
T ss_pred             hchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHH----HHhCC-ccCCCCC
Confidence            0    0111    245777                           67777776543321110    11111 2234667


Q ss_pred             HHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccCCC
Q 039505          302 SVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNGSR  338 (342)
Q Consensus       302 ~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~~~  338 (342)
                      |+..+.+++..||+.+|++||++..+++.++.+....
T Consensus       929 CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~  965 (1025)
T KOG1095|consen  929 CPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAA  965 (1025)
T ss_pred             CChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhh
Confidence            8888999999999999999999999999888876543

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.63  E-value=9.7e-16  Score=148.04  Aligned_cols=165  Identities=15%  Similarity=0.163  Sum_probs=101.7

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC----eEEEEEccCCCCCCCcc--------------EE-EeeCC---cEEE--E---
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS----EVAMKMLSPSSSQGHVP--------------IV-ECHVG---ALIT--I---  212 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~----~vAVK~l~~~~~~~~~~--------------Lv-~c~~~---~lv~--m---  212 (342)
                      .|.  +.||+|+||.||+|...+.    .||||.+...... ..+              ++ ++...   ++++  +   
T Consensus        93 ~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~~~-~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  171 (392)
T PHA03207         93 QYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGKTP-GREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYKCD  171 (392)
T ss_pred             ceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccccH-HHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcCCC
Confidence            355  8999999999999986432    7999998654321 112              23 22222   2322  1   


Q ss_pred             ----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc--------cccccc
Q 039505          213 ----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH--------MSTTIA  260 (342)
Q Consensus       213 ----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~--------~~~~~~  260 (342)
                                            ++.||+|||+   .+|+||||||+|||++.+  .++.+++....        ......
T Consensus       172 l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~---~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~  248 (392)
T PHA03207        172 LFTYVDRSGPLPLEQAITIQRRLLEALAYLHG---RGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWS  248 (392)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEccCccccccCcccccccccccc
Confidence                                  8899999999   999999999999999988  44444332211        112356


Q ss_pred             cCcceee--------------------------cCCCCcccccccc----cccccc-cc-------------------cc
Q 039505          261 GTAGFLN--------------------------TKNPVISKSIENG----NSHLRD-KS-------------------TV  290 (342)
Q Consensus       261 Gt~~y~a--------------------------tG~~P~~~~~~~~----~~~l~~-~~-------------------~~  290 (342)
                      ||+.|+|                          +|+.|+.......    ...++. ..                   ..
T Consensus       249 gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (392)
T PHA03207        249 GTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQY  328 (392)
T ss_pred             cccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhh
Confidence            8999988                          8888886543211    000000 00                   00


Q ss_pred             cccCCCCCC-------hHHHHHHHHHHHHcccccCCCCCCHHHHHHH
Q 039505          291 DLSFKGEFD-------IISVGKAVEIAMASVSSKVNRRPLMNQVVMV  330 (342)
Q Consensus       291 d~~l~~~~~-------~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~  330 (342)
                      .......+.       ......+.+++.+|++.+|++|||+.|++..
T Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~  375 (392)
T PHA03207        329 AIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL  375 (392)
T ss_pred             cccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence            000000000       0112356778899999999999999999853

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.63  E-value=6.5e-16  Score=155.63  Aligned_cols=52  Identities=21%  Similarity=0.305  Sum_probs=40.3

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC---CccccCCCCCc-------cccccccCcceee
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK---SRISPVEGGTH-------MSTTIAGTAGFLN  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~---a~~~~~~~~~~-------~~~~~~Gt~~y~a  267 (342)
                      +++||+|||+   .+|+||||||+|||++++   .++.+++....       ......||+.|+|
T Consensus       264 ll~aL~yLH~---~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~A  325 (566)
T PLN03225        264 ILFALDGLHS---TGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAA  325 (566)
T ss_pred             HHHHHHHHHH---CCEEeCcCCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccC
Confidence            6789999999   999999999999999864   56666554422       1234678899998

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.63  E-value=1.7e-15  Score=138.96  Aligned_cols=76  Identities=21%  Similarity=0.308  Sum_probs=57.4

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCC-CCc-----c--------------EE-EeeCC---cEEE--E----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQ-GHV-----P--------------IV-ECHVG---ALIT--I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~-~~~-----~--------------Lv-~c~~~---~lv~--m----  212 (342)
                      ..||+|+||.||+|.....  .||+|++...... ...     +              ++ ++..+   .+++  +    
T Consensus         7 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~   86 (286)
T cd07847           7 SKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHTV   86 (286)
T ss_pred             eeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEeccCccH
Confidence            7899999999999998754  9999998654321 111     1              22 33333   3333  2    


Q ss_pred             ----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC
Q 039505          213 ----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK  243 (342)
Q Consensus       213 ----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~  243 (342)
                                            ++.||+|||+   .+++||||||+||+++.+
T Consensus        87 l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~---~~i~H~dl~p~nil~~~~  136 (286)
T cd07847          87 LNELEKNPRGVPEHLIKKIIWQTLQAVNFCHK---HNCIHRDVKPENILITKQ  136 (286)
T ss_pred             HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCChhhEEEcCC
Confidence                                  8899999999   999999999999999987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.63  E-value=4.2e-16  Score=145.04  Aligned_cols=165  Identities=15%  Similarity=0.192  Sum_probs=102.8

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-------c--------------EE-EeeCC---cEEE-
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-------P--------------IV-ECHVG---ALIT-  211 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-------~--------------Lv-~c~~~---~lv~-  211 (342)
                      +|.  +.||+|+||.||++.....  .||+|.+.........       +              ++ .+..+   ++++ 
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (305)
T cd05609           2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME   81 (305)
T ss_pred             CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence            455  8999999999999998765  8999998765321111       1              22 22222   3444 


Q ss_pred             -E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc--------
Q 039505          212 -I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH--------  254 (342)
Q Consensus       212 -m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~--------  254 (342)
                       +                          +++||+|||+   .+++||||||+||+++.+  .++.+++....        
T Consensus        82 ~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~  158 (305)
T cd05609          82 YVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHN---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTN  158 (305)
T ss_pred             cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHEEECCCCCEEEeeCCCccccCcCcccc
Confidence             2                          7799999999   899999999999999987  33433332110        


Q ss_pred             -------------cccccccCcceee--------------------------cCCCCcccccccc-cccccccccccccC
Q 039505          255 -------------MSTTIAGTAGFLN--------------------------TKNPVISKSIENG-NSHLRDKSTVDLSF  294 (342)
Q Consensus       255 -------------~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~-~~~l~~~~~~d~~l  294 (342)
                                   ......|+..|+|                          ||+.|+....... ...........+..
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  238 (305)
T cd05609         159 LYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEG  238 (305)
T ss_pred             ccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCc
Confidence                         0011346677777                          7888876432111 00000011111111


Q ss_pred             CCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHh
Q 039505          295 KGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQ  333 (342)
Q Consensus       295 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~  333 (342)
                          .......+.+++.+||+.+|++||++.++.+.|+.
T Consensus       239 ----~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~  273 (305)
T cd05609         239 ----DEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH  273 (305)
T ss_pred             ----cccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence                11234558899999999999999997666665554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.63  E-value=9.7e-16  Score=140.45  Aligned_cols=158  Identities=20%  Similarity=0.265  Sum_probs=99.8

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc----------------E---E-EeeCC---cEEE--E-----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP----------------I---V-ECHVG---ALIT--I-----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~----------------L---v-~c~~~---~lv~--m-----  212 (342)
                      +.||+|+||.||+|.....  .||||.+..........                +   + ++..+   ++|+  +     
T Consensus        10 ~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l   89 (277)
T cd06641          10 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSA   89 (277)
T ss_pred             eeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCCCCcH
Confidence            7899999999999987644  99999886543211101                2   2 23332   3333  1     


Q ss_pred             --------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCcc------ccccccCcc
Q 039505          213 --------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHM------STTIAGTAG  264 (342)
Q Consensus       213 --------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~~------~~~~~Gt~~  264 (342)
                                          ++.|+.|||+   .+++|+||||+||+++.+.  ++.+++.....      .....|+.+
T Consensus        90 ~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  166 (277)
T cd06641          90 LDLLEPGPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF  166 (277)
T ss_pred             HHHHhcCCCCHHHHHHHHHHHHHHHHHHcc---CCeecCCCCHHhEEECCCCCEEEeecccceecccchhhhccccCCcc
Confidence                                8899999999   9999999999999999883  33333322111      112346666


Q ss_pred             eee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccC
Q 039505          265 FLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKV  318 (342)
Q Consensus       265 y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P  318 (342)
                      |++                          ||+.|+.......   ..  ..+...............+.+++.+||+.+|
T Consensus       167 y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p  241 (277)
T cd06641         167 WMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMK---VL--FLIPKNNPPTLEGNYSKPLKEFVEACLNKEP  241 (277)
T ss_pred             ccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHH---HH--HHHhcCCCCCCCcccCHHHHHHHHHHccCCh
Confidence            666                          7777775432211   00  0011111111222334558889999999999


Q ss_pred             CCCCCHHHHHHH
Q 039505          319 NRRPLMNQVVMV  330 (342)
Q Consensus       319 ~~RPsm~eV~~~  330 (342)
                      ++||++.++++.
T Consensus       242 ~~Rp~~~~~l~~  253 (277)
T cd06641         242 SFRPTAKELLKH  253 (277)
T ss_pred             hhCcCHHHHHhC
Confidence            999999999873

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.63  E-value=9.3e-16  Score=140.83  Aligned_cols=158  Identities=18%  Similarity=0.196  Sum_probs=98.1

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc------------------EE-EeeCC---cEEE--E------
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP------------------IV-ECHVG---ALIT--I------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~------------------Lv-~c~~~---~lv~--m------  212 (342)
                      +.||+|+||.||+|.....  .+|+|.+..........                  ++ +|..+   ++++  +      
T Consensus        11 ~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l~   90 (282)
T cd06643          11 GELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVD   90 (282)
T ss_pred             hhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCCcHH
Confidence            7799999999999998765  88999986543211111                  22 33322   3333  1      


Q ss_pred             ---------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc------cccccccCc
Q 039505          213 ---------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH------MSTTIAGTA  263 (342)
Q Consensus       213 ---------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~------~~~~~~Gt~  263 (342)
                                           +++||.|||+   .+++||||||+|||++.+.  ++.+++....      ......|+.
T Consensus        91 ~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~---~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~  167 (282)
T cd06643          91 AVMLELERPLTEPQIRVVCKQTLEALNYLHE---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTP  167 (282)
T ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEccCCCEEEccccccccccccccccccccccc
Confidence                                 8899999999   9999999999999999873  3333332211      112245666


Q ss_pred             ceee-------------------------------cCCCCcccccccccccccc-cccccccCCCCCChHHHHHHHHHHH
Q 039505          264 GFLN-------------------------------TKNPVISKSIENGNSHLRD-KSTVDLSFKGEFDIISVGKAVEIAM  311 (342)
Q Consensus       264 ~y~a-------------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~l~~~~~~~~~~~l~~l~~  311 (342)
                      .|+|                               +|++|+.......  .... .....+.+  ..+......+.+++.
T Consensus       168 ~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~li~  243 (282)
T cd06643         168 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMR--VLLKIAKSEPPTL--AQPSRWSSEFKDFLK  243 (282)
T ss_pred             cccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHH--HHHHHhhcCCCCC--CCccccCHHHHHHHH
Confidence            6666                               5666654332111  0000 00001111  112223456889999


Q ss_pred             HcccccCCCCCCHHHHHH
Q 039505          312 ASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       312 ~Cl~~~P~~RPsm~eV~~  329 (342)
                      +||+.+|++||++.++++
T Consensus       244 ~~l~~~p~~Rp~~~~il~  261 (282)
T cd06643         244 KCLEKNVDARWTTTQLLQ  261 (282)
T ss_pred             HHccCChhhCcCHHHHhc
Confidence            999999999999999875

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.63  E-value=2.9e-16  Score=148.29  Aligned_cols=173  Identities=17%  Similarity=0.220  Sum_probs=104.0

Q ss_pred             hhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-----c-----------EE----EeeCC--------
Q 039505          160 TNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-----P-----------IV----ECHVG--------  207 (342)
Q Consensus       160 t~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-----~-----------Lv----~c~~~--------  207 (342)
                      +++|.  +.||+|+||.||+|....+  .||||+++........     +           ++    ++...        
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   83 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV   83 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence            45666  8999999999999987644  9999998643221110     1           22    22211        


Q ss_pred             cEEE--E------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-----
Q 039505          208 ALIT--I------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-----  254 (342)
Q Consensus       208 ~lv~--m------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-----  254 (342)
                      ++++  +                        +++||+|||+   .+|+||||||+|||++.+  .++.+++....     
T Consensus        84 ~lv~e~~~~~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~  160 (336)
T cd07849          84 YIVQELMETDLYKLIKTQHLSNDHIQYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEH  160 (336)
T ss_pred             EEEehhcccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEECcccceeeccccc
Confidence            2332  1                        7899999999   999999999999999987  33333322111     


Q ss_pred             ----cccccccCcceee---------------------------cCCCCcccccccc-cccccc----------cccccc
Q 039505          255 ----MSTTIAGTAGFLN---------------------------TKNPVISKSIENG-NSHLRD----------KSTVDL  292 (342)
Q Consensus       255 ----~~~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~-~~~l~~----------~~~~d~  292 (342)
                          ......||..|+|                           ||+.|+....... ...+..          ..+.+.
T Consensus       161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (336)
T cd07849         161 DHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISL  240 (336)
T ss_pred             cccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhch
Confidence                0112356777777                           7888875432100 000000          000000


Q ss_pred             c-------CC--CCCC-----hHHHHHHHHHHHHcccccCCCCCCHHHHHHH--HHhcc
Q 039505          293 S-------FK--GEFD-----IISVGKAVEIAMASVSSKVNRRPLMNQVVMV--REQGN  335 (342)
Q Consensus       293 ~-------l~--~~~~-----~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~--L~~i~  335 (342)
                      .       ..  ...+     .....++.+++.+||+.+|++|||+.|+++.  ++...
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~  299 (336)
T cd07849         241 RARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH  299 (336)
T ss_pred             hhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence            0       00  0000     1123458899999999999999999999865  54443

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.63  E-value=4.1e-16  Score=141.29  Aligned_cols=162  Identities=20%  Similarity=0.262  Sum_probs=99.0

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-------c---------------EE-EeeCC---cEEE--E--
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-------P---------------IV-ECHVG---ALIT--I--  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-------~---------------Lv-~c~~~---~lv~--m--  212 (342)
                      +.||+|+||.||+|.....  .||||.+.........       +               +. ++..+   ++++  +  
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            4689999999999998654  9999998654211100       0               22 33222   3332  1  


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc--ccccccCcc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM--STTIAGTAG  264 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~--~~~~~Gt~~  264 (342)
                                              +++||.|||+   .+++||||+|+||+++++  .++.+++.....  .....|+..
T Consensus        82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~  158 (260)
T cd05611          82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQ---RGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPD  158 (260)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEeecccceeccccccCCCCcC
Confidence                                    8899999999   899999999999999987  334433322111  122345556


Q ss_pred             eee--------------------------cCCCCcccccccccccccc-cccccccCCCCCChHHHHHHHHHHHHccccc
Q 039505          265 FLN--------------------------TKNPVISKSIENGNSHLRD-KSTVDLSFKGEFDIISVGKAVEIAMASVSSK  317 (342)
Q Consensus       265 y~a--------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~  317 (342)
                      |++                          ||+.|+.......   +.. ...................+.+++.+||+.+
T Consensus       159 y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~  235 (260)
T cd05611         159 YLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA---VFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMD  235 (260)
T ss_pred             ccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHH---HHHHHHhcccCCCCcccccCCHHHHHHHHHHccCC
Confidence            655                          7888876543221   111 0000011111111223456889999999999


Q ss_pred             CCCCCCHHHHHHHHH
Q 039505          318 VNRRPLMNQVVMVRE  332 (342)
Q Consensus       318 P~~RPsm~eV~~~L~  332 (342)
                      |++||++.++.+.|+
T Consensus       236 p~~R~~~~~~~~~l~  250 (260)
T cd05611         236 PAKRLGANGYQEIKS  250 (260)
T ss_pred             HHHccCCCcHHHHHc
Confidence            999998765555443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.63  E-value=8.2e-16  Score=142.68  Aligned_cols=159  Identities=18%  Similarity=0.196  Sum_probs=101.2

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc------------------EE-EeeCC---cEEE--E------
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP------------------IV-ECHVG---ALIT--I------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~------------------Lv-~c~~~---~lv~--m------  212 (342)
                      +.||.|+||.||+|.....  .||+|.+..........                  ++ ++..+   ++++  +      
T Consensus        25 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~  104 (296)
T cd06655          25 EKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLT  104 (296)
T ss_pred             EEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCCCcHH
Confidence            7899999999999987544  99999987543222111                  22 33333   3343  1      


Q ss_pred             -------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc------cccccccCcce
Q 039505          213 -------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH------MSTTIAGTAGF  265 (342)
Q Consensus       213 -------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~------~~~~~~Gt~~y  265 (342)
                                         ++.||+|||+   .+++||||||+||+++.+.  ++.+++....      ......|+..|
T Consensus       105 ~~~~~~~l~~~~~~~i~~~l~~al~~LH~---~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y  181 (296)
T cd06655         105 DVVTETCMDEAQIAAVCRECLQALEFLHA---NQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYW  181 (296)
T ss_pred             HHHHhcCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccchhcccccccCCCcCCCccc
Confidence                               7899999999   9999999999999999873  3333332111      11224577778


Q ss_pred             ee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCC
Q 039505          266 LN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVN  319 (342)
Q Consensus       266 ~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~  319 (342)
                      +|                          ||+.|+...........+... ..+.+  ..+......+.+++.+||+.+|+
T Consensus       182 ~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~li~~~l~~dp~  258 (296)
T cd06655         182 MAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GTPEL--QNPEKLSPIFRDFLNRCLEMDVE  258 (296)
T ss_pred             cCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-CCccc--CCcccCCHHHHHHHHHHhhcChh
Confidence            77                          788887654321100000000 00111  11222344578899999999999


Q ss_pred             CCCCHHHHHH
Q 039505          320 RRPLMNQVVM  329 (342)
Q Consensus       320 ~RPsm~eV~~  329 (342)
                      +||++.+++.
T Consensus       259 ~Rpt~~~il~  268 (296)
T cd06655         259 KRGSAKELLQ  268 (296)
T ss_pred             hCCCHHHHhh
Confidence            9999999984

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.63  E-value=9.2e-16  Score=138.25  Aligned_cols=157  Identities=16%  Similarity=0.173  Sum_probs=99.4

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc--------------------EE--EeeCC--cEEE--E----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP--------------------IV--ECHVG--ALIT--I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~--------------------Lv--~c~~~--~lv~--m----  212 (342)
                      +.||+|+||.||++.....  .+|||.+..........                    +.  ++..+  .+++  +    
T Consensus         6 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~   85 (256)
T cd08220           6 RVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPGGT   85 (256)
T ss_pred             EEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecCCCCC
Confidence            7899999999999998655  99999987543211110                    11  11111  2332  1    


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC---CccccCCCCCcc-----ccccc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK---SRISPVEGGTHM-----STTIA  260 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~---a~~~~~~~~~~~-----~~~~~  260 (342)
                                              +++||+|||+   .+++||||||+||+++++   .++.+++.....     .....
T Consensus        86 L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~  162 (256)
T cd08220          86 LAEYIQKRCNSLLDEDTILHFFVQILLALHHVHT---KLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYTVV  162 (256)
T ss_pred             HHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCccccccc
Confidence                                    8999999999   999999999999999865   345444332211     12245


Q ss_pred             cCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcc
Q 039505          261 GTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASV  314 (342)
Q Consensus       261 Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl  314 (342)
                      |+..|+|                          ||+.|+.......   .. ....... ....+......+.+++..||
T Consensus       163 ~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~---~~-~~~~~~~-~~~~~~~~~~~l~~li~~~l  237 (256)
T cd08220         163 GTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPA---LV-LKIMSGT-FAPISDRYSPDLRQLILSML  237 (256)
T ss_pred             cCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHH---HH-HHHHhcC-CCCCCCCcCHHHHHHHHHHc
Confidence            7777777                          5666654432111   00 0011100 01112223456889999999


Q ss_pred             cccCCCCCCHHHHHH
Q 039505          315 SSKVNRRPLMNQVVM  329 (342)
Q Consensus       315 ~~~P~~RPsm~eV~~  329 (342)
                      +.+|++|||+.|+++
T Consensus       238 ~~~p~~Rpt~~~ll~  252 (256)
T cd08220         238 NLDPSKRPQLSQIMA  252 (256)
T ss_pred             cCChhhCCCHHHHhh
Confidence            999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.63  E-value=1.3e-15  Score=140.55  Aligned_cols=82  Identities=24%  Similarity=0.344  Sum_probs=60.1

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC------cc--------------EE-Eee-C--C--cEEE--E--
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH------VP--------------IV-ECH-V--G--ALIT--I--  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~------~~--------------Lv-~c~-~--~--~lv~--m--  212 (342)
                      +.||+|+||.||+|....+  .+|+|.++.......      .+              +. ++. .  .  ++++  +  
T Consensus        11 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~~~~   90 (293)
T cd07843          11 NRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVEH   90 (293)
T ss_pred             hhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEehhcCc
Confidence            8999999999999998754  899999975432211      11              22 332 2  1  3433  1  


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccC
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPV  249 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~  249 (342)
                                              ++.||+|||+   .+++||||||+||+++++  .++.++
T Consensus        91 ~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~~l~d~  150 (293)
T cd07843          91 DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHD---NWILHRDLKTSNLLLNNRGILKICDF  150 (293)
T ss_pred             CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCcEEEeec
Confidence                                    8899999999   899999999999999987  444443

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.63  E-value=1.5e-15  Score=139.99  Aligned_cols=82  Identities=27%  Similarity=0.433  Sum_probs=60.8

Q ss_pred             HhhccC--cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCCCc-----c-----------E---E-EeeCC---cEEE
Q 039505          159 VTNNFE--RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQGHV-----P-----------I---V-ECHVG---ALIT  211 (342)
Q Consensus       159 at~~f~--~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~~~-----~-----------L---v-~c~~~---~lv~  211 (342)
                      ++++|.  +.||+|+||.||+|.... + .||+|++.........     +           +   . ++..+   ++++
T Consensus         3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   82 (291)
T cd07870           3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF   82 (291)
T ss_pred             ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence            455666  899999999999998764 3 9999998755332211     1           2   2 33222   3333


Q ss_pred             --E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC
Q 039505          212 --I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK  243 (342)
Q Consensus       212 --m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~  243 (342)
                        +                          +++||.|||+   .+|+||||||+|||++.+
T Consensus        83 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nil~~~~  139 (291)
T cd07870          83 EYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHG---QHILHRDLKPQNLLISYL  139 (291)
T ss_pred             ecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEEcCC
Confidence              1                          8899999999   899999999999999987

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.63  E-value=1.9e-15  Score=138.00  Aligned_cols=113  Identities=11%  Similarity=0.085  Sum_probs=69.3

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-------cccccccCcceee----------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-------MSTTIAGTAGFLN----------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-------~~~~~~Gt~~y~a----------------  267 (342)
                      +++||+|||+   .+|+||||||+||+++.+  .++.+.+....       ......++..|++                
T Consensus       126 l~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~  202 (275)
T cd05046         126 IALGMDHLSN---ARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVW  202 (275)
T ss_pred             HHHHHHHhhh---cCcccCcCccceEEEeCCCcEEEcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHH
Confidence            8899999999   899999999999999987  33333222111       0111234455665                


Q ss_pred             ----------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHH
Q 039505          268 ----------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVRE  332 (342)
Q Consensus       268 ----------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~  332 (342)
                                + |..|+.......   ++. ......+....+......+.+++.+||+.+|++||++.|++..|+
T Consensus       203 slG~~l~~l~~~~~~p~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         203 SFGVLMWEVFTQGELPFYGLSDEE---VLN-RLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             HHHHHHHHHHhCCCCCccccchHH---HHH-HHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence                      3 555554322111   010 000011111112234456889999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.63  E-value=4.6e-16  Score=142.83  Aligned_cols=162  Identities=19%  Similarity=0.206  Sum_probs=97.9

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC------cc--------------EE-EeeCC---cEEE--E----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH------VP--------------IV-ECHVG---ALIT--I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~------~~--------------Lv-~c~~~---~lv~--m----  212 (342)
                      +.||+|+||.||+|.+.++  .||+|++........      .+              +. +|..+   ++++  +    
T Consensus         7 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   86 (286)
T cd07846           7 GLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHTV   86 (286)
T ss_pred             eeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCCccH
Confidence            8999999999999999754  999999865432211      11              11 22222   3332  1    


Q ss_pred             ----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------cccccccC
Q 039505          213 ----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIAGT  262 (342)
Q Consensus       213 ----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~Gt  262 (342)
                                            +++||+|||+   .+++||||+|+||+++++  .++.+++....      ......++
T Consensus        87 l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  163 (286)
T cd07846          87 LDDLEKYPNGLDESRVRKYLFQILRGIEFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYVAT  163 (286)
T ss_pred             HHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccCcccce
Confidence                                  8999999999   899999999999999988  33333322111      11123355


Q ss_pred             cceee---------------------------cCCCCcccccccc-ccccc-------c--------cc----cccccCC
Q 039505          263 AGFLN---------------------------TKNPVISKSIENG-NSHLR-------D--------KS----TVDLSFK  295 (342)
Q Consensus       263 ~~y~a---------------------------tG~~P~~~~~~~~-~~~l~-------~--------~~----~~d~~l~  295 (342)
                      ..|+|                           ||++|+....... ...+.       .        ..    ...+...
T Consensus       164 ~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (286)
T cd07846         164 RWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVK  243 (286)
T ss_pred             eeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhcccccccc
Confidence            55555                           7877775332100 00000       0        00    0001110


Q ss_pred             CC-----CChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          296 GE-----FDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       296 ~~-----~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ..     ........+.+++.+||+.+|++||++.++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  282 (286)
T cd07846         244 EIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH  282 (286)
T ss_pred             CcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence            00     01123456889999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.63  E-value=4.2e-16  Score=141.43  Aligned_cols=100  Identities=24%  Similarity=0.312  Sum_probs=71.2

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc------c-----------------EE-EeeCC--cEEE--E--
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV------P-----------------IV-ECHVG--ALIT--I--  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~------~-----------------Lv-~c~~~--~lv~--m--  212 (342)
                      +.|++|+||.||+|+.+.+  .||+|+++......--      +                 ++ -|.-.  ++|+  +  
T Consensus        82 nrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~Eh  161 (419)
T KOG0663|consen   82 NRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVEH  161 (419)
T ss_pred             hhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHHHh
Confidence            8999999999999999876  8999999876522111      1                 11 11111  2222  1  


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------cccccc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIA  260 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~  260 (342)
                                              +++|++|||.   ..|+|||||++|+|++..  -|+.+++....      .-+..+
T Consensus       162 DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~---~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~~T~lV  238 (419)
T KOG0663|consen  162 DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHD---NWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKPYTPLV  238 (419)
T ss_pred             hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhh---ceeEecccchhheeeccCCcEEecccchhhhhcCCcccCcceE
Confidence                                    8899999999   999999999999999998  44554443322      124467


Q ss_pred             cCcceee
Q 039505          261 GTAGFLN  267 (342)
Q Consensus       261 Gt~~y~a  267 (342)
                      -|.+|.|
T Consensus       239 VTLWYRa  245 (419)
T KOG0663|consen  239 VTLWYRA  245 (419)
T ss_pred             EEeeecC
Confidence            7888988

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.63  E-value=5.5e-16  Score=143.60  Aligned_cols=159  Identities=17%  Similarity=0.177  Sum_probs=100.4

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc------------------EE-EeeCC---cEEE--E------
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP------------------IV-ECHVG---ALIT--I------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~------------------Lv-~c~~~---~lv~--m------  212 (342)
                      ..||+|+||.||++....+  .||||.+........+.                  ++ .+..+   ++++  +      
T Consensus        28 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~  107 (292)
T cd06658          28 IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALT  107 (292)
T ss_pred             hcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHH
Confidence            5789999999999988654  99999986543221111                  12 22222   3333  1      


Q ss_pred             -------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------cccccccCcce
Q 039505          213 -------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIAGTAGF  265 (342)
Q Consensus       213 -------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~Gt~~y  265 (342)
                                         ++.||+|||+   .+|+||||||+||+++++  .++.+++....      ......|+..|
T Consensus       108 ~~~~~~~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y  184 (292)
T cd06658         108 DIVTHTRMNEEQIATVCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYW  184 (292)
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecCccc
Confidence                               8899999999   899999999999999987  44444332211      11224577778


Q ss_pred             ee--------------------------cCCCCcccccccccccccc-cccccccCCCCCChHHHHHHHHHHHHcccccC
Q 039505          266 LN--------------------------TKNPVISKSIENGNSHLRD-KSTVDLSFKGEFDIISVGKAVEIAMASVSSKV  318 (342)
Q Consensus       266 ~a--------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P  318 (342)
                      +|                          +|+.|+.......  .+.. .....+.+...  ......+.+++..||+.+|
T Consensus       185 ~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~P  260 (292)
T cd06658         185 MAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ--AMRRIRDNLPPRVKDS--HKVSSVLRGFLDLMLVREP  260 (292)
T ss_pred             cCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhcCCCccccc--cccCHHHHHHHHHHccCCh
Confidence            77                          7888876432211  0000 11112222111  1223457788889999999


Q ss_pred             CCCCCHHHHHHH
Q 039505          319 NRRPLMNQVVMV  330 (342)
Q Consensus       319 ~~RPsm~eV~~~  330 (342)
                      ++|||+.++++.
T Consensus       261 ~~Rpt~~~il~~  272 (292)
T cd06658         261 SQRATAQELLQH  272 (292)
T ss_pred             hHCcCHHHHhhC
Confidence            999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.62  E-value=5.9e-16  Score=142.08  Aligned_cols=160  Identities=18%  Similarity=0.227  Sum_probs=99.1

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC--c----c--------------EE-EeeCC---cEEE--E----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH--V----P--------------IV-ECHVG---ALIT--I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~--~----~--------------Lv-~c~~~---~lv~--m----  212 (342)
                      +.||+|+||.||+|.+..+  .||||+++.......  .    +              ++ ++..+   ++++  +    
T Consensus         7 ~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~   86 (288)
T cd07833           7 GVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVERTL   86 (288)
T ss_pred             EEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecCCCCH
Confidence            7899999999999998755  999999875422111  0    0              22 33222   3333  1    


Q ss_pred             ----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-------ccccccc
Q 039505          213 ----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-------MSTTIAG  261 (342)
Q Consensus       213 ----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-------~~~~~~G  261 (342)
                                            ++.||+|||+   .+++||||||+||+++++  .++.+++....       ......+
T Consensus        87 l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~  163 (288)
T cd07833          87 LELLEASPGGLPPDAVRSYIWQLLQAIAYCHS---HNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVA  163 (288)
T ss_pred             HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccccCccc
Confidence                                  8999999999   899999999999999988  33333322111       1112345


Q ss_pred             Ccceee---------------------------cCCCCcccccccccccccc------------cc--cccccCCC----
Q 039505          262 TAGFLN---------------------------TKNPVISKSIENGNSHLRD------------KS--TVDLSFKG----  296 (342)
Q Consensus       262 t~~y~a---------------------------tG~~P~~~~~~~~~~~l~~------------~~--~~d~~l~~----  296 (342)
                      +..|+|                           +|+.|+.......  .+..            ..  ..++....    
T Consensus       164 ~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (288)
T cd07833         164 TRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDID--QLYLIQKCLGPLPPSHQELFSSNPRFAGVAFP  241 (288)
T ss_pred             ccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCCHHHhhhcccCccccccccC
Confidence            555655                           7777775432110  0000            00  00000000    


Q ss_pred             ----------CCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          297 ----------EFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       297 ----------~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                                .++.....++.+++.+||..+|++||++.+++.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         242 EPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             CCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence                      011122566899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.62  E-value=7.5e-16  Score=141.63  Aligned_cols=160  Identities=19%  Similarity=0.229  Sum_probs=97.2

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC-----cc--------------------------EE--EeeCC--
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH-----VP--------------------------IV--ECHVG--  207 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~-----~~--------------------------Lv--~c~~~--  207 (342)
                      +.||+|+||.||++.+...  .||+|.+........     .+                          ++  ||..+  
T Consensus         7 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l   86 (286)
T cd06622           7 DELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAGSL   86 (286)
T ss_pred             hhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecCCCCH
Confidence            8899999999999998744  999998865321111     01                          12  44332  


Q ss_pred             --c--E-----EE-E---------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc----cccccccC
Q 039505          208 --A--L-----IT-I---------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH----MSTTIAGT  262 (342)
Q Consensus       208 --~--l-----v~-m---------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~----~~~~~~Gt  262 (342)
                        +  -     .+ .         ++.||.|||+.  .+|+||||||+||+++.+.  ++.+++....    ......|+
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~  164 (286)
T cd06622          87 DKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKTNIGC  164 (286)
T ss_pred             HHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCccccCCCc
Confidence              0  0     00 0         88999999962  5899999999999999873  3333332211    11223455


Q ss_pred             cceee--------------------------------cCCCCcccccccccccccc-cccccccCCCCCChHHHHHHHHH
Q 039505          263 AGFLN--------------------------------TKNPVISKSIENGNSHLRD-KSTVDLSFKGEFDIISVGKAVEI  309 (342)
Q Consensus       263 ~~y~a--------------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~l~~~~~~~~~~~l~~l  309 (342)
                      .+|+|                                ||+.|+.......  .... ..+.+.. ....+......+.++
T Consensus       165 ~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~l  241 (286)
T cd06622         165 QSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN--IFAQLSAIVDGD-PPTLPSGYSDDAQDF  241 (286)
T ss_pred             cCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh--HHHHHHHHhhcC-CCCCCcccCHHHHHH
Confidence            55554                                6666664322111  0000 1111111 112233345668899


Q ss_pred             HHHcccccCCCCCCHHHHHH
Q 039505          310 AMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       310 ~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      +.+||+.+|++||++.+++.
T Consensus       242 i~~~l~~~p~~Rp~~~~l~~  261 (286)
T cd06622         242 VAKCLNKIPNRRPTYAQLLE  261 (286)
T ss_pred             HHHHcccCcccCCCHHHHhc
Confidence            99999999999999999986

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.62  E-value=1.4e-15  Score=136.85  Aligned_cols=159  Identities=18%  Similarity=0.268  Sum_probs=99.3

Q ss_pred             cccCcCCCeeEEEEEECC-----C-eEEEEEccCCCCCCCcc-------------------EE-EeeCC---cEEE--E-
Q 039505          165 RVPYKGGFITVYHGQLVK-----S-EVAMKMLSPSSSQGHVP-------------------IV-ECHVG---ALIT--I-  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~-----~-~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~---~lv~--m-  212 (342)
                      +.||+|+||.||++.+..     . .||+|.+..........                   ++ ++...   ++++  + 
T Consensus         5 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~~~   84 (258)
T smart00219        5 KKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYME   84 (258)
T ss_pred             ceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEeccC
Confidence            789999999999999875     3 89999997654321111                   22 33322   2222  1 


Q ss_pred             ---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCccc-------
Q 039505          213 ---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHMS-------  256 (342)
Q Consensus       213 ---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~~~-------  256 (342)
                                                 ++.||+|||+   .+++||||||+||+++++.  ++.+++......       
T Consensus        85 ~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~---~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~  161 (258)
T smart00219       85 GGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLES---KNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKK  161 (258)
T ss_pred             CCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhc---CCeeecccccceEEEccCCeEEEcccCCceeccccccccc
Confidence                                       7889999999   8999999999999999883  333332221110       


Q ss_pred             cccccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHH
Q 039505          257 TTIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEI  309 (342)
Q Consensus       257 ~~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l  309 (342)
                      ....+++.|+|                          + |+.|+.......   +.+ .+.. ......+......+.++
T Consensus       162 ~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~---~~~-~~~~-~~~~~~~~~~~~~~~~~  236 (258)
T smart00219      162 KGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEE---VLE-YLKK-GYRLPKPENCPPEIYKL  236 (258)
T ss_pred             ccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHH-HHhc-CCCCCCCCcCCHHHHHH
Confidence            01224566665                          3 566665422111   110 0000 00111122245568889


Q ss_pred             HHHcccccCCCCCCHHHHHHHH
Q 039505          310 AMASVSSKVNRRPLMNQVVMVR  331 (342)
Q Consensus       310 ~~~Cl~~~P~~RPsm~eV~~~L  331 (342)
                      +.+|+..+|++|||+.|+++.|
T Consensus       237 i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      237 MLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             HHHHCcCChhhCcCHHHHHhhC
Confidence            9999999999999999998764

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.62  E-value=2.2e-15  Score=136.89  Aligned_cols=161  Identities=19%  Similarity=0.294  Sum_probs=100.1

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC-c---------c-----------E---E-EeeCC---cEEE--E
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH-V---------P-----------I---V-ECHVG---ALIT--I  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~-~---------~-----------L---v-~c~~~---~lv~--m  212 (342)
                      +.||+|+||.||+|....+  .||+|++........ .         +           +   + +|.++   .+++  +
T Consensus         6 ~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e~~   85 (268)
T cd06630           6 QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWM   85 (268)
T ss_pred             ceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEEecc
Confidence            7899999999999987544  999999875431110 0         0           2   2 33322   3333  1


Q ss_pred             --------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC---CccccCCCCCcc--------
Q 039505          213 --------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK---SRISPVEGGTHM--------  255 (342)
Q Consensus       213 --------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~---a~~~~~~~~~~~--------  255 (342)
                                                ++.||.|||+   .+++||||||+||+++.+   .++.+++.....        
T Consensus        86 ~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~---~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~  162 (268)
T cd06630          86 AGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHE---NQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAG  162 (268)
T ss_pred             CCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEcccccccccccccccCC
Confidence                                      8999999999   899999999999999866   233333322110        


Q ss_pred             --ccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHH
Q 039505          256 --STTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAV  307 (342)
Q Consensus       256 --~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~  307 (342)
                        .....|+..|+|                          +|+.|+...........+ ............+......+.
T Consensus       163 ~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  241 (268)
T cd06630         163 EFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALI-FKIASATTAPSIPEHLSPGLR  241 (268)
T ss_pred             ccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHH-HHHhccCCCCCCchhhCHHHH
Confidence              112356777777                          777777543211100000 000000111222333446688


Q ss_pred             HHHHHcccccCCCCCCHHHHHH
Q 039505          308 EIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       308 ~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      +++.+|++.+|++||++.+++.
T Consensus       242 ~~i~~~l~~~p~~R~~~~~ll~  263 (268)
T cd06630         242 DVTLRCLELQPEDRPPSRELLK  263 (268)
T ss_pred             HHHHHHcCCCcccCcCHHHHhc
Confidence            9999999999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.62  E-value=3.2e-15  Score=134.72  Aligned_cols=158  Identities=17%  Similarity=0.214  Sum_probs=99.6

Q ss_pred             cccCcCCCeeEEEEEEC-CC-eEEEEEccCCCCCCC-c----c------------------EE-EeeCC---cEEE--E-
Q 039505          165 RVPYKGGFITVYHGQLV-KS-EVAMKMLSPSSSQGH-V----P------------------IV-ECHVG---ALIT--I-  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~-~~-~vAVK~l~~~~~~~~-~----~------------------Lv-~c~~~---~lv~--m-  212 (342)
                      +.||+|+||.||+|... ++ .|++|.+........ +    .                  +. ++..+   ++++  + 
T Consensus         6 ~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (258)
T cd06632           6 ELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELVP   85 (258)
T ss_pred             ceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEEecC
Confidence            78999999999999987 44 999999865432110 0    0                  23 34333   3333  1 


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-----cccccc
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-----MSTTIA  260 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-----~~~~~~  260 (342)
                                               +++||+|||+   .+++|+||||+||+++.+  .++.+++....     ......
T Consensus        86 ~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~  162 (258)
T cd06632          86 GGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHD---RNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSFK  162 (258)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccceeccccccccccC
Confidence                                     8899999999   899999999999999988  34433322111     012234


Q ss_pred             cCcceee---------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHc
Q 039505          261 GTAGFLN---------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMAS  313 (342)
Q Consensus       261 Gt~~y~a---------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~C  313 (342)
                      |+..|++                           +|+.|+.......  .+..  ..........+......+.+++.+|
T Consensus       163 ~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~li~~~  238 (258)
T cd06632         163 GSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVA--AVFK--IGRSKELPPIPDHLSDEAKDFILKC  238 (258)
T ss_pred             CCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHH--HHHH--HHhcccCCCcCCCcCHHHHHHHHHH
Confidence            6666665                           7777775543111  1110  0000000111222345578899999


Q ss_pred             ccccCCCCCCHHHHHH
Q 039505          314 VSSKVNRRPLMNQVVM  329 (342)
Q Consensus       314 l~~~P~~RPsm~eV~~  329 (342)
                      |+.+|++||++.+++.
T Consensus       239 l~~~p~~Rp~~~~~l~  254 (258)
T cd06632         239 LQRDPSLRPTAAELLE  254 (258)
T ss_pred             hhcCcccCcCHHHHhc
Confidence            9999999999999875

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.62  E-value=1.9e-15  Score=139.26  Aligned_cols=77  Identities=29%  Similarity=0.478  Sum_probs=58.2

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC-----cc--------------EE-EeeCC---cEEE--E-----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH-----VP--------------IV-ECHVG---ALIT--I-----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~-----~~--------------Lv-~c~~~---~lv~--m-----  212 (342)
                      +.||+|++|.||+|.....  .||||.+........     .+              +. ++..+   ++|+  +     
T Consensus        11 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~L~   90 (291)
T cd07844          11 DKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLDTDLK   90 (291)
T ss_pred             EEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCCCCHH
Confidence            7899999999999998744  999999875432211     11              22 33333   3443  1     


Q ss_pred             ---------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC
Q 039505          213 ---------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS  244 (342)
Q Consensus       213 ---------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a  244 (342)
                                           +++||.|||+   .+|+||||||+||+++.+.
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~dl~p~nil~~~~~  140 (291)
T cd07844          91 QYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQ---RRVLHRDLKPQNLLISERG  140 (291)
T ss_pred             HHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCHHHEEEcCCC
Confidence                                 8999999999   8999999999999999883

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.62  E-value=6.4e-16  Score=146.39  Aligned_cols=181  Identities=18%  Similarity=0.175  Sum_probs=107.9

Q ss_pred             HHHHHHHh----hccC--cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCCC------cc--------------EE-E
Q 039505          153 LELSLRVT----NNFE--RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQGH------VP--------------IV-E  203 (342)
Q Consensus       153 ~~~l~~at----~~f~--~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~~------~~--------------Lv-~  203 (342)
                      .+|+.+++    ++|.  +.||+|+||.||+|.... + .||||++........      .+              +. +
T Consensus         3 ~~~~~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~   82 (342)
T cd07879           3 REEVNKTVWELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDV   82 (342)
T ss_pred             hhhhhhhhhccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhhe
Confidence            34555554    5665  899999999999999764 4 999999865321111      11              22 2


Q ss_pred             eeCC---------cEEE--E-----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--Cccc
Q 039505          204 CHVG---------ALIT--I-----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRIS  247 (342)
Q Consensus       204 c~~~---------~lv~--m-----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~  247 (342)
                      +...         +++.  +                       +++||+|||+   .+|+||||||+||+++.+  .++.
T Consensus        83 ~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dlkp~NIll~~~~~~kL~  159 (342)
T cd07879          83 FTSAVSGDEFQDFYLVMPYMQTDLQKIMGHPLSEDKVQYLVYQMLCGLKYIHS---AGIIHRDLKPGNLAVNEDCELKIL  159 (342)
T ss_pred             ecccccCCCCceEEEEecccccCHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEe
Confidence            2211         2222  1                       8899999999   899999999999999988  3444


Q ss_pred             cCCCCCcc---ccccccCcceee---------------------------cCCCCcccccccc-cccccc----------
Q 039505          248 PVEGGTHM---STTIAGTAGFLN---------------------------TKNPVISKSIENG-NSHLRD----------  286 (342)
Q Consensus       248 ~~~~~~~~---~~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~-~~~l~~----------  286 (342)
                      +++.....   .....++..|+|                           +|+.||....... ...++.          
T Consensus       160 dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  239 (342)
T cd07879         160 DFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFV  239 (342)
T ss_pred             eCCCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence            43322111   112345666665                           7888886532110 000000          


Q ss_pred             --------ccccc--ccCCCC-C---ChHHHHHHHHHHHHcccccCCCCCCHHHHHHH--HHhccC
Q 039505          287 --------KSTVD--LSFKGE-F---DIISVGKAVEIAMASVSSKVNRRPLMNQVVMV--REQGNG  336 (342)
Q Consensus       287 --------~~~~d--~~l~~~-~---~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~--L~~i~~  336 (342)
                              ....+  +..... .   .......+.+++.+||+.+|++||++.+++..  ++..+.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~  305 (342)
T cd07879         240 QKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD  305 (342)
T ss_pred             HHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence                    00000  000000 0   00123457899999999999999999999843  555543

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.62  E-value=1.3e-15  Score=138.53  Aligned_cols=160  Identities=16%  Similarity=0.230  Sum_probs=96.2

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc----c-----------EE----EeeCC---cEEE--E------
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV----P-----------IV----ECHVG---ALIT--I------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~----~-----------Lv----~c~~~---~lv~--m------  212 (342)
                      +.||+|+||.||+|+...+  .||+|.++........    +           ++    .+..+   ++++  +      
T Consensus        15 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~   94 (267)
T cd06645          15 QRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQ   94 (267)
T ss_pred             HHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCcHH
Confidence            8899999999999998654  9999998755322111    1           22    11111   2222  1      


Q ss_pred             --------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCcc--ccCCCCCc------cccccccCcc
Q 039505          213 --------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI--SPVEGGTH------MSTTIAGTAG  264 (342)
Q Consensus       213 --------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~~--~~~~~~~~------~~~~~~Gt~~  264 (342)
                                          ++.||.|||+   .+++|+||||+||+++.+..+  .+++....      ......|+..
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  171 (267)
T cd06645          95 DIYHVTGPLSESQIAYVSRETLQGLYYLHS---KGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSFIGTPY  171 (267)
T ss_pred             HHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECcceeeeEccCcccccccccCccc
Confidence                                8899999999   899999999999999987433  33222111      1122457777


Q ss_pred             eee-----------------------------cCCCCccccccccc-ccccccccccccCCCCCChHHHHHHHHHHHHcc
Q 039505          265 FLN-----------------------------TKNPVISKSIENGN-SHLRDKSTVDLSFKGEFDIISVGKAVEIAMASV  314 (342)
Q Consensus       265 y~a-----------------------------tG~~P~~~~~~~~~-~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl  314 (342)
                      |+|                             +|+.|+........ ..........+....  .......+.+++.+|+
T Consensus       172 y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l  249 (267)
T cd06645         172 WMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKD--KMKWSNSFHHFVKMAL  249 (267)
T ss_pred             ccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccc--cCCCCHHHHHHHHHHc
Confidence            776                             55555533221110 000000011111110  0112345788999999


Q ss_pred             cccCCCCCCHHHHHH
Q 039505          315 SSKVNRRPLMNQVVM  329 (342)
Q Consensus       315 ~~~P~~RPsm~eV~~  329 (342)
                      +.+|++||++.++++
T Consensus       250 ~~~P~~R~~~~~ll~  264 (267)
T cd06645         250 TKNPKKRPTAEKLLQ  264 (267)
T ss_pred             cCCchhCcCHHHHhc
Confidence            999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.62  E-value=1.4e-15  Score=141.97  Aligned_cols=158  Identities=18%  Similarity=0.192  Sum_probs=99.5

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc---------------------EE-EeeCC---cEEE-E----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP---------------------IV-ECHVG---ALIT-I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~---------------------Lv-~c~~~---~lv~-m----  212 (342)
                      +.||+|+||+||+|...+.  .+|+|.+..........                     ++ .+..+   ++++ .    
T Consensus         7 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~   86 (316)
T cd05574           7 KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYCPGG   86 (316)
T ss_pred             eeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEecCCC
Confidence            7899999999999998764  99999997654321000                     11 22222   2222 1    


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCc--cccCCCCCc-----------
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSR--ISPVEGGTH-----------  254 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~--~~~~~~~~~-----------  254 (342)
                                               +++||+|||+   .+++||||||+||+++.+..  +.+++....           
T Consensus        87 ~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~  163 (316)
T cd05574          87 ELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHL---LGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKA  163 (316)
T ss_pred             CHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChHHeEEcCCCCEEEeecchhhcccccccccccc
Confidence                                     8899999999   99999999999999998732  222221100           


Q ss_pred             ------------------------cccccccCcceee--------------------------cCCCCcccccccccccc
Q 039505          255 ------------------------MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHL  284 (342)
Q Consensus       255 ------------------------~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l  284 (342)
                                              ......||..|+|                          +|+.|+.......  .+
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~--~~  241 (316)
T cd05574         164 LRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDE--TF  241 (316)
T ss_pred             cccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHH--HH
Confidence                                    0112356777877                          7888876543221  11


Q ss_pred             cccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCC----HHHHHH
Q 039505          285 RDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPL----MNQVVM  329 (342)
Q Consensus       285 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs----m~eV~~  329 (342)
                        .++.+..............+.+++.+||+.+|++||+    +.|++.
T Consensus       242 --~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~  288 (316)
T cd05574         242 --SNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ  288 (316)
T ss_pred             --HHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence              1111111111111114566889999999999999999    666654

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.62  E-value=1.9e-16  Score=163.99  Aligned_cols=156  Identities=21%  Similarity=0.236  Sum_probs=107.8

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC--cc------------------------------EE--EeeCC-
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH--VP------------------------------IV--ECHVG-  207 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~--~~------------------------------Lv--~c~~~-  207 (342)
                      ..||.|.||.||-|...++  ..|||.++.......  +.                              +.  ||.++ 
T Consensus      1241 ~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~Gs 1320 (1509)
T KOG4645|consen 1241 NFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGGS 1320 (1509)
T ss_pred             cccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccCc
Confidence            7899999999999987665  899998876643311  11                              22  77776 


Q ss_pred             ---cEEE------E--------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCccccCCCCCccc------------cc
Q 039505          208 ---ALIT------I--------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTHMS------------TT  258 (342)
Q Consensus       208 ---~lv~------m--------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~~~~~~~~~~~~------------~~  258 (342)
                         .+..      |        ++.|++|||+   ++||||||||+||+|+.++-+...+++++..            ..
T Consensus      1321 La~ll~~gri~dE~vt~vyt~qll~gla~LH~---~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~ 1397 (1509)
T KOG4645|consen 1321 LASLLEHGRIEDEMVTRVYTKQLLEGLAYLHE---HGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQS 1397 (1509)
T ss_pred             HHHHHHhcchhhhhHHHHHHHHHHHHHHHHHh---cCceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHHh
Confidence               1111      1        8999999999   9999999999999999995333333332211            23


Q ss_pred             cccCcceee-----------------------------cCCCCccccccccccccc-c-cccccccCCCCCChHHHHHHH
Q 039505          259 IAGTAGFLN-----------------------------TKNPVISKSIENGNSHLR-D-KSTVDLSFKGEFDIISVGKAV  307 (342)
Q Consensus       259 ~~Gt~~y~a-----------------------------tG~~P~~~~~~~~~~~l~-~-~~~~d~~l~~~~~~~~~~~l~  307 (342)
                      ..||+.|||                             ||++|+.....+.  .+. . ...-.|.+    +.....+-.
T Consensus      1398 ~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~--aIMy~V~~gh~Pq~----P~~ls~~g~ 1471 (1509)
T KOG4645|consen 1398 MMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEW--AIMYHVAAGHKPQI----PERLSSEGR 1471 (1509)
T ss_pred             hcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchh--HHHhHHhccCCCCC----chhhhHhHH
Confidence            679999999                             9999988765443  111 0 11112222    333445567


Q ss_pred             HHHHHcccccCCCCCCHHHHHH
Q 039505          308 EIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       308 ~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      +.+-.|++.||++|.++.|+++
T Consensus      1472 dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1472 DFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred             HHHHHHHhcCchhhhHHHHHHH
Confidence            7888999999999998887765

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.62  E-value=1.9e-15  Score=139.25  Aligned_cols=172  Identities=18%  Similarity=0.166  Sum_probs=105.6

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc-------------------EE-EeeCC-----cEEE-
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP-------------------IV-ECHVG-----ALIT-  211 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~-----~lv~-  211 (342)
                      +|.  +.||.|++|.||+|.....  .+|+|.+..........                   ++ +|...     ++++ 
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e   81 (287)
T cd06621           2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAME   81 (287)
T ss_pred             ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEE
Confidence            455  7899999999999998655  99999987543221111                   22 33221     3333 


Q ss_pred             -E------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc----
Q 039505          212 -I------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH----  254 (342)
Q Consensus       212 -m------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~----  254 (342)
                       +                              +++||+|||+   .+++|+||+|+||+++++  .++.+++....    
T Consensus        82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~  158 (287)
T cd06621          82 YCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHS---RKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNS  158 (287)
T ss_pred             ecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecCCeEEEeecccccccccc
Confidence             1                              8899999999   999999999999999988  33333332111    


Q ss_pred             cccccccCcceee--------------------------cCCCCcccccccc--cccccc--cccccccCCCCCC--hHH
Q 039505          255 MSTTIAGTAGFLN--------------------------TKNPVISKSIENG--NSHLRD--KSTVDLSFKGEFD--IIS  302 (342)
Q Consensus       255 ~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~--~~~l~~--~~~~d~~l~~~~~--~~~  302 (342)
                      ......++..|+|                          ||+.|+.......  ...+..  .....+.+.....  ...
T Consensus       159 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (287)
T cd06621         159 LAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKW  238 (287)
T ss_pred             ccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCch
Confidence            1112345566665                          8888887552210  001111  0111111111111  123


Q ss_pred             HHHHHHHHHHcccccCCCCCCHHHHHH--HHHhccC
Q 039505          303 VGKAVEIAMASVSSKVNRRPLMNQVVM--VREQGNG  336 (342)
Q Consensus       303 ~~~l~~l~~~Cl~~~P~~RPsm~eV~~--~L~~i~~  336 (342)
                      ...+.+++.+||+.+|++|||+.|+++  .+.....
T Consensus       239 ~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~  274 (287)
T cd06621         239 SEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQMK  274 (287)
T ss_pred             HHHHHHHHHHHcCCCcccCCCHHHHHhCcccccccc
Confidence            456889999999999999999999986  4444333

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.62  E-value=1.8e-16  Score=139.91  Aligned_cols=161  Identities=21%  Similarity=0.159  Sum_probs=109.0

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc-----------------EE-----EeeCC-cEEE---E----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP-----------------IV-----ECHVG-ALIT---I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~-----------------Lv-----~c~~~-~lv~---m----  212 (342)
                      ..||.|+||+|+|-.++..  ..|||++.....+..+.                 ++     ...+| +.+.   |    
T Consensus        70 g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~Sl  149 (361)
T KOG1006|consen   70 GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDISL  149 (361)
T ss_pred             HHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhhhH
Confidence            6899999999999998755  99999998765432222                 22     12233 3333   2    


Q ss_pred             --------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-----ccccc
Q 039505          213 --------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-----MSTTI  259 (342)
Q Consensus       213 --------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-----~~~~~  259 (342)
                                                ...||.||-..  ..|||||+||+|||||..  .|+++++-..+     ..+..
T Consensus       150 DklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~--lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT~d  227 (361)
T KOG1006|consen  150 DKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEE--LKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKTVD  227 (361)
T ss_pred             HHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHH--hhhhhccCChhheEEecCCCEeeecccchHhHHHHHHhhhc
Confidence                                      67899999984  789999999999999988  45555543322     22446


Q ss_pred             ccCcceee----------------------------cCCCCcccccccccccccccccccccC-CCC-CChHHHHHHHHH
Q 039505          260 AGTAGFLN----------------------------TKNPVISKSIENGNSHLRDKSTVDLSF-KGE-FDIISVGKAVEI  309 (342)
Q Consensus       260 ~Gt~~y~a----------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l-~~~-~~~~~~~~l~~l  309 (342)
                      +|...|||                            ||+.|+....... .++.+...-||.. ..+ ...+....+.+.
T Consensus       228 aGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svf-eql~~Vv~gdpp~l~~~~~~~~~s~~~~~f  306 (361)
T KOG1006|consen  228 AGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVF-EQLCQVVIGDPPILLFDKECVHYSFSMVRF  306 (361)
T ss_pred             cCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHH-HHHHHHHcCCCCeecCcccccccCHHHHHH
Confidence            78888998                            8999988764321 1222122223322 111 123345668888


Q ss_pred             HHHcccccCCCCCCHHHHH
Q 039505          310 AMASVSSKVNRRPLMNQVV  328 (342)
Q Consensus       310 ~~~Cl~~~P~~RPsm~eV~  328 (342)
                      +..|+.++...||...++.
T Consensus       307 intCl~Kd~~~Rpky~~Lk  325 (361)
T KOG1006|consen  307 INTCLIKDRSDRPKYDDLK  325 (361)
T ss_pred             HHHHhhcccccCcchhhhh
Confidence            8999999999999988764

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.62  E-value=1.7e-15  Score=136.49  Aligned_cols=162  Identities=19%  Similarity=0.220  Sum_probs=102.6

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCC--Ccc--------------EE-EeeCC---cEEE--E--
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQG--HVP--------------IV-ECHVG---ALIT--I--  212 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~--~~~--------------Lv-~c~~~---~lv~--m--  212 (342)
                      ++|.  +.||+|+||.||+|.+..+  .+|+|.++......  .++              ++ ++...   ++++  +  
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~   82 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGA   82 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCC
Confidence            3455  8899999999999999764  99999987543100  000              22 22222   2333  1  


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------ccccc
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTI  259 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~  259 (342)
                                               +++||.|||+   .+++||||+|+||+++++  .++.+++....      .....
T Consensus        83 ~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~  159 (256)
T cd06612          83 GSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHS---NKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTV  159 (256)
T ss_pred             CcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEECCCCcEEEcccccchhcccCccccccc
Confidence                                     8899999999   899999999999999988  34444332211      11223


Q ss_pred             ccCcceee--------------------------cCCCCcccccccccccccc-cccccccCCCCCChHHHHHHHHHHHH
Q 039505          260 AGTAGFLN--------------------------TKNPVISKSIENGNSHLRD-KSTVDLSFKGEFDIISVGKAVEIAMA  312 (342)
Q Consensus       260 ~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~l~~~~~~~~~~~l~~l~~~  312 (342)
                      .|+..|+|                          ||+.|+.......  .... .....+.+  ..+......+.+++.+
T Consensus       160 ~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~  235 (256)
T cd06612         160 IGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMR--AIFMIPNKPPPTL--SDPEKWSPEFNDFVKK  235 (256)
T ss_pred             cCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhh--hhhhhccCCCCCC--CchhhcCHHHHHHHHH
Confidence            46777776                          7888876543221  0000 00000111  1122233568889999


Q ss_pred             cccccCCCCCCHHHHHH
Q 039505          313 SVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       313 Cl~~~P~~RPsm~eV~~  329 (342)
                      ||+.+|++|||+.||+.
T Consensus       236 ~l~~~P~~Rps~~~il~  252 (256)
T cd06612         236 CLVKDPEERPSAIQLLQ  252 (256)
T ss_pred             HHhcChhhCcCHHHHhc
Confidence            99999999999999975

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.61  E-value=1.8e-15  Score=139.72  Aligned_cols=158  Identities=18%  Similarity=0.194  Sum_probs=97.2

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc------------------EE-Eee-CC--cEEE--E------
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP------------------IV-ECH-VG--ALIT--I------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~------------------Lv-~c~-~~--~lv~--m------  212 (342)
                      +.||+|+||.||+|+....  .+|+|.+..........                  +. .+. ++  ++++  +      
T Consensus        18 ~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~   97 (292)
T cd06644          18 GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVD   97 (292)
T ss_pred             heecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCCCCcHH
Confidence            7899999999999998764  89999987553221111                  22 222 22  3333  1      


Q ss_pred             ---------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------cccccccCc
Q 039505          213 ---------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIAGTA  263 (342)
Q Consensus       213 ---------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~Gt~  263 (342)
                                           ++.||+|||+   .+++||||||+||+++.+  .++.+++....      ......++.
T Consensus        98 ~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~  174 (292)
T cd06644          98 AIMLELDRGLTEPQIQVICRQMLEALQYLHS---MKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFIGTP  174 (292)
T ss_pred             HHHHhhcCCCCHHHHHHHHHHHHHHHHHHhc---CCeeecCCCcceEEEcCCCCEEEccCccceeccccccccceecCCc
Confidence                                 8899999999   999999999999999877  34444332211      111234555


Q ss_pred             ceee-------------------------------cCCCCcccccccccccccc-cccccccCCCCCChHHHHHHHHHHH
Q 039505          264 GFLN-------------------------------TKNPVISKSIENGNSHLRD-KSTVDLSFKGEFDIISVGKAVEIAM  311 (342)
Q Consensus       264 ~y~a-------------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~l~~~~~~~~~~~l~~l~~  311 (342)
                      .|+|                               ||+.|+.......  .... .....+..  ..+......+.+++.
T Consensus       175 ~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~li~  250 (292)
T cd06644         175 YWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR--VLLKIAKSEPPTL--SQPSKWSMEFRDFLK  250 (292)
T ss_pred             cccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHH--HHHHHhcCCCccC--CCCcccCHHHHHHHH
Confidence            5555                               5555554322110  0000 00001111  112223346888999


Q ss_pred             HcccccCCCCCCHHHHHH
Q 039505          312 ASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       312 ~Cl~~~P~~RPsm~eV~~  329 (342)
                      +||+.+|++||++.++++
T Consensus       251 ~~l~~~p~~Rp~~~~il~  268 (292)
T cd06644         251 TALDKHPETRPSAAQLLE  268 (292)
T ss_pred             HHhcCCcccCcCHHHHhc
Confidence            999999999999999975

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.61  E-value=7.8e-16  Score=141.09  Aligned_cols=163  Identities=18%  Similarity=0.208  Sum_probs=99.5

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc----c--------------EE-EeeCC---cEEE--E
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV----P--------------IV-ECHVG---ALIT--I  212 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~----~--------------Lv-~c~~~---~lv~--m  212 (342)
                      ++|.  +.||+|+||.||+|.+...  .+|+|.+.........    +              ++ .+...   ++++  +
T Consensus         5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (280)
T cd06611           5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFC   84 (280)
T ss_pred             hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeecc
Confidence            3455  7899999999999998654  9999998654321111    1              22 22222   2332  1


Q ss_pred             ---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc------ccc
Q 039505          213 ---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH------MST  257 (342)
Q Consensus       213 ---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~------~~~  257 (342)
                                                 ++.||.|||+   .+|+||||||+||+++.+.  ++.+++....      ...
T Consensus        85 ~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~  161 (280)
T cd06611          85 DGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHS---HKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRD  161 (280)
T ss_pred             CCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEECCCCCEEEccCccchhhcccccccc
Confidence                                       8899999999   8999999999999999873  3333221111      112


Q ss_pred             ccccCcceee-------------------------------cCCCCcccccccccccccc-cccccccCCCCCChHHHHH
Q 039505          258 TIAGTAGFLN-------------------------------TKNPVISKSIENGNSHLRD-KSTVDLSFKGEFDIISVGK  305 (342)
Q Consensus       258 ~~~Gt~~y~a-------------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~l~~~~~~~~~~~  305 (342)
                      ...|++.|++                               +|+.|+.......  .+.. .....+.+  ..+......
T Consensus       162 ~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~  237 (280)
T cd06611         162 TFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMR--VLLKILKSEPPTL--DQPSKWSSS  237 (280)
T ss_pred             eeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHH--HHHHHhcCCCCCc--CCcccCCHH
Confidence            2346666655                               6666665432111  0000 00000111  111223345


Q ss_pred             HHHHHHHcccccCCCCCCHHHHHHH
Q 039505          306 AVEIAMASVSSKVNRRPLMNQVVMV  330 (342)
Q Consensus       306 l~~l~~~Cl~~~P~~RPsm~eV~~~  330 (342)
                      +.+++..||+.+|++||++.++++.
T Consensus       238 ~~~li~~~l~~~p~~Rps~~~il~~  262 (280)
T cd06611         238 FNDFLKSCLVKDPDDRPTAAELLKH  262 (280)
T ss_pred             HHHHHHHHhccChhhCcCHHHHhcC
Confidence            7889999999999999999999753

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.61  E-value=1.9e-15  Score=138.82  Aligned_cols=157  Identities=24%  Similarity=0.287  Sum_probs=98.4

Q ss_pred             ccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-------c--------------EE----EeeCC---cEEE--E-
Q 039505          166 VPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-------P--------------IV----ECHVG---ALIT--I-  212 (342)
Q Consensus       166 ~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-------~--------------Lv----~c~~~---~lv~--m-  212 (342)
                      +||+|+||.||++.....  .||+|.+.........       +              ++    ++...   ++|+  + 
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            589999999999987654  9999998654221110       0              11    22222   3333  1 


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc----ccccccc
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH----MSTTIAG  261 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~----~~~~~~G  261 (342)
                                               +++||+|||+   .+|+||||||+||+++++  .++.+++....    ......|
T Consensus        81 g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~  157 (278)
T cd05606          81 GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG  157 (278)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCcCC
Confidence                                     8899999999   899999999999999988  33444332211    1122457


Q ss_pred             Ccceee---------------------------cCCCCcccccccccccccc-cccccccCCCCCChHHHHHHHHHHHHc
Q 039505          262 TAGFLN---------------------------TKNPVISKSIENGNSHLRD-KSTVDLSFKGEFDIISVGKAVEIAMAS  313 (342)
Q Consensus       262 t~~y~a---------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~l~~~~~~~~~~~l~~l~~~C  313 (342)
                      +..|+|                           ||+.|+............. ....++.+    +......+.+++.+|
T Consensus       158 ~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~s~~~~~li~~~  233 (278)
T cd05606         158 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVEL----PDSFSPELRSLLEGL  233 (278)
T ss_pred             CcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCCC----CCcCCHHHHHHHHHH
Confidence            777776                           6777776442111000000 11111222    222345688999999


Q ss_pred             ccccCCCCC-----CHHHHHH
Q 039505          314 VSSKVNRRP-----LMNQVVM  329 (342)
Q Consensus       314 l~~~P~~RP-----sm~eV~~  329 (342)
                      +..+|++||     ++.++++
T Consensus       234 l~~~p~~R~~~~~~~~~~ll~  254 (278)
T cd05606         234 LQRDVNRRLGCLGRGAQEVKE  254 (278)
T ss_pred             hhcCHHhccCCCCCCHHHHHh
Confidence            999999999     8989874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.61  E-value=3.2e-17  Score=146.83  Aligned_cols=158  Identities=19%  Similarity=0.210  Sum_probs=110.0

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCC--Ccc--------------------------EE--EeeCC----c
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQG--HVP--------------------------IV--ECHVG----A  208 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~--~~~--------------------------Lv--~c~~~----~  208 (342)
                      ..||+|+||.|||+.++..  .||||.+.....-.  .++                          ++  ||-.+    .
T Consensus        39 ~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI  118 (502)
T KOG0574|consen   39 GKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGSISDI  118 (502)
T ss_pred             HHhcCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCcHHHH
Confidence            7899999999999998765  99999987654211  011                          22  44433    0


Q ss_pred             EEE----E-----------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCccc------cccccCcce
Q 039505          209 LIT----I-----------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHMS------TTIAGTAGF  265 (342)
Q Consensus       209 lv~----m-----------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~~------~~~~Gt~~y  265 (342)
                      +..    +           .+.||+|||.   ..-||||||..||||+.+  |++.+++...+.+      .++.||+.|
T Consensus       119 ~R~R~K~L~E~EIs~iL~~TLKGL~YLH~---~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVIGTPFW  195 (502)
T KOG0574|consen  119 MRARRKPLSEQEISAVLRDTLKGLQYLHD---LKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVIGTPFW  195 (502)
T ss_pred             HHHhcCCccHHHHHHHHHHHHhHHHHHHH---HHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCccccCccc
Confidence            000    0           6789999999   888999999999999988  7888776654433      447899999


Q ss_pred             ee--------------------------cCCCCcccccccccccccccccccccCCC--CCChHHHHHHHHHHHHccccc
Q 039505          266 LN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKG--EFDIISVGKAVEIAMASVSSK  317 (342)
Q Consensus       266 ~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~--~~~~~~~~~l~~l~~~Cl~~~  317 (342)
                      ||                          -|++|+.......  .+   -++....++  .-+......+-+.+..|+-++
T Consensus       196 MAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMR--AI---FMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~  270 (502)
T KOG0574|consen  196 MAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMR--AI---FMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKK  270 (502)
T ss_pred             ccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccc--ee---EeccCCCCCCCCChHhhhhHHHHHHHHHhcCC
Confidence            99                          6888887654332  11   111111111  123444566889999999999


Q ss_pred             CCCCCCHHHHHHH
Q 039505          318 VNRRPLMNQVVMV  330 (342)
Q Consensus       318 P~~RPsm~eV~~~  330 (342)
                      |++|-|+.++++.
T Consensus       271 PE~R~TA~~L~~H  283 (502)
T KOG0574|consen  271 PEERKTALRLCEH  283 (502)
T ss_pred             HHHHHHHHHHhhh
Confidence            9999999887653

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.61  E-value=1.9e-15  Score=139.61  Aligned_cols=165  Identities=14%  Similarity=0.180  Sum_probs=99.9

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC------cc--------------EE-EeeCC---cEEE--
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH------VP--------------IV-ECHVG---ALIT--  211 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~------~~--------------Lv-~c~~~---~lv~--  211 (342)
                      +|.  +.||+|++|+||+|....+  .||+|++........      .+              +. ++..+   ++|+  
T Consensus         3 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   82 (294)
T PLN00009          3 QYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEY   82 (294)
T ss_pred             ceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEec
Confidence            454  7899999999999998744  899999865432211      01              22 33332   3333  


Q ss_pred             E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC---CccccCCCCCc------c
Q 039505          212 I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK---SRISPVEGGTH------M  255 (342)
Q Consensus       212 m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~---a~~~~~~~~~~------~  255 (342)
                      +                           ++.||+|||+   .+++||||||+||+++.+   .++.+++....      .
T Consensus        83 ~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~  159 (294)
T PLN00009         83 LDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHS---HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRT  159 (294)
T ss_pred             ccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCcceEEEECCCCEEEEcccccccccCCCccc
Confidence            1                           8899999999   899999999999999854   24444332211      1


Q ss_pred             ccccccCcceee---------------------------cCCCCcccccccc-cccccc------cc------------c
Q 039505          256 STTIAGTAGFLN---------------------------TKNPVISKSIENG-NSHLRD------KS------------T  289 (342)
Q Consensus       256 ~~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~-~~~l~~------~~------------~  289 (342)
                      .....+++.|+|                           ||+.|+....... ...+..      ..            .
T Consensus       160 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (294)
T PLN00009        160 FTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKS  239 (294)
T ss_pred             cccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhh
Confidence            112345556655                           8888876432111 000000      00            0


Q ss_pred             ccccCCCC----CChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          290 VDLSFKGE----FDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       290 ~d~~l~~~----~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      .-+.....    .......++.+++.+|++.+|++||++.++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~  283 (294)
T PLN00009        240 AFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE  283 (294)
T ss_pred             hcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence            00000000    01112345788999999999999999999985

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.61  E-value=1.2e-15  Score=137.62  Aligned_cols=157  Identities=15%  Similarity=0.192  Sum_probs=99.0

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc------c--------------EE-EeeCC---cEEE--E----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV------P--------------IV-ECHVG---ALIT--I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~------~--------------Lv-~c~~~---~lv~--m----  212 (342)
                      +.||+|+||.||+|.....  .+|+|.+.........      +              ++ .|..+   ++++  +    
T Consensus         6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   85 (257)
T cd08225           6 KKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGGD   85 (257)
T ss_pred             EEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCCCCc
Confidence            7899999999999998754  8999998654211110      1              12 22222   2333  1    


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC---ccccCCCCCc------ccccc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS---RISPVEGGTH------MSTTI  259 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a---~~~~~~~~~~------~~~~~  259 (342)
                                              +++||+|||+   .+++|+||||+||+++++.   ++.+++....      .....
T Consensus        86 L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~  162 (257)
T cd08225          86 LMKRINRQRGVLFSEDQILSWFVQISLGLKHIHD---RKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYTC  162 (257)
T ss_pred             HHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEcCCCCeEEecccccchhccCCccccccc
Confidence                                    8899999999   8999999999999999872   3444332211      11123


Q ss_pred             ccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHc
Q 039505          260 AGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMAS  313 (342)
Q Consensus       260 ~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~C  313 (342)
                      .|++.|+|                          +|+.|+.......   .+ ........ ..........+.+++.+|
T Consensus       163 ~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~---~~-~~~~~~~~-~~~~~~~~~~~~~~i~~~  237 (257)
T cd08225         163 VGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQ---LV-LKICQGYF-APISPNFSRDLRSLISQL  237 (257)
T ss_pred             CCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH---HH-HHHhcccC-CCCCCCCCHHHHHHHHHH
Confidence            57777776                          6777765432111   00 01111111 111122334688899999


Q ss_pred             ccccCCCCCCHHHHHH
Q 039505          314 VSSKVNRRPLMNQVVM  329 (342)
Q Consensus       314 l~~~P~~RPsm~eV~~  329 (342)
                      |+.+|++|||+.+++.
T Consensus       238 l~~~p~~Rpt~~~ll~  253 (257)
T cd08225         238 FKVSPRDRPSITSILK  253 (257)
T ss_pred             hccChhhCcCHHHHhh
Confidence            9999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.61  E-value=1.1e-15  Score=137.98  Aligned_cols=157  Identities=15%  Similarity=0.145  Sum_probs=99.3

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc--c------------------EE-EeeCC---cEEE--E----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV--P------------------IV-ECHVG---ALIT--I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~--~------------------Lv-~c~~~---~lv~--m----  212 (342)
                      +.||+|+||.||++....+  .||+|.+.........  +                  +. ++...   ++++  +    
T Consensus         6 ~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~   85 (256)
T cd08218           6 KKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGGD   85 (256)
T ss_pred             EEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecCCCCc
Confidence            7899999999999988654  9999998653221110  0                  22 22222   3333  1    


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc------ccccc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM------STTIA  260 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~------~~~~~  260 (342)
                                              ++.||.|||+   .+++|+||+|+|||++.+  .++.+++.....      .....
T Consensus        86 l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~  162 (256)
T cd08218          86 LYKKINAQRGVLFPEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELARTCI  162 (256)
T ss_pred             HHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhhhcc
Confidence                                    8899999999   899999999999999987  334433322111      11234


Q ss_pred             cCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcc
Q 039505          261 GTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASV  314 (342)
Q Consensus       261 Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl  314 (342)
                      |++.|+|                          ||+.|+.......   .+ ..+..... ...+......+.+++.+||
T Consensus       163 ~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~---~~-~~~~~~~~-~~~~~~~~~~~~~li~~~l  237 (256)
T cd08218         163 GTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKN---LV-LKIIRGSY-PPVSSHYSYDLRNLVSQLF  237 (256)
T ss_pred             CCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHH---HH-HHHhcCCC-CCCcccCCHHHHHHHHHHh
Confidence            6677776                          6776665432111   00 00111111 1122233456889999999


Q ss_pred             cccCCCCCCHHHHHH
Q 039505          315 SSKVNRRPLMNQVVM  329 (342)
Q Consensus       315 ~~~P~~RPsm~eV~~  329 (342)
                      +.+|++||+|.+|++
T Consensus       238 ~~~p~~Rp~~~~vl~  252 (256)
T cd08218         238 KRNPRDRPSVNSILE  252 (256)
T ss_pred             hCChhhCcCHHHHhh
Confidence            999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.61  E-value=1.5e-15  Score=139.36  Aligned_cols=76  Identities=25%  Similarity=0.422  Sum_probs=56.6

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc------c--------------EE-EeeCC---cEEE--E----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV------P--------------IV-ECHVG---ALIT--I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~------~--------------Lv-~c~~~---~lv~--m----  212 (342)
                      +.||+|++|.||+|.....  .||||+++........      +              ++ ++.++   ++++  +    
T Consensus         6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~l   85 (284)
T cd07860           6 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL   85 (284)
T ss_pred             eeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccccCH
Confidence            7899999999999998654  9999998754322111      1              22 22222   2222  1    


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK  243 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~  243 (342)
                                             +++||+|||+   .+++||||||+||+++++
T Consensus        86 ~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~---~~i~H~~l~p~nill~~~  136 (284)
T cd07860          86 KKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE  136 (284)
T ss_pred             HHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCC
Confidence                                   8899999999   899999999999999988

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.61  E-value=1e-15  Score=149.53  Aligned_cols=100  Identities=21%  Similarity=0.219  Sum_probs=71.6

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc-----------------------EE--EeeCC--cEEE-E--
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP-----------------------IV--ECHVG--ALIT-I--  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~-----------------------Lv--~c~~~--~lv~-m--  212 (342)
                      ++||+|+||.|-||+...+  .||||+++....-..++                       +.  +...+  ++|+ |  
T Consensus       192 e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfELL~  271 (586)
T KOG0667|consen  192 EVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFELLS  271 (586)
T ss_pred             EEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeeehhhh
Confidence            7999999999999998776  99999998764221111                       33  22222  7777 3  


Q ss_pred             --------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC----CccccCCCCCccccc---c
Q 039505          213 --------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK----SRISPVEGGTHMSTT---I  259 (342)
Q Consensus       213 --------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~----a~~~~~~~~~~~~~~---~  259 (342)
                                                |+.||.+||+   .+|||+||||+||||.+-    -|+++++.+......   .
T Consensus       272 ~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~---l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vytY  348 (586)
T KOG0667|consen  272 TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHE---LGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVYTY  348 (586)
T ss_pred             hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCChhheeeccCCcCceeEEecccccccCCcceee
Confidence                                      8999999999   999999999999999876    566666554333222   3


Q ss_pred             ccCcceee
Q 039505          260 AGTAGFLN  267 (342)
Q Consensus       260 ~Gt~~y~a  267 (342)
                      .-+..|.|
T Consensus       349 iQSRfYRA  356 (586)
T KOG0667|consen  349 IQSRFYRA  356 (586)
T ss_pred             eecccccc
Confidence            34445555

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.61  E-value=4.1e-15  Score=141.41  Aligned_cols=167  Identities=14%  Similarity=0.123  Sum_probs=102.5

Q ss_pred             hhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC------cc--------------EE-EeeCC-------
Q 039505          160 TNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH------VP--------------IV-ECHVG-------  207 (342)
Q Consensus       160 t~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~------~~--------------Lv-~c~~~-------  207 (342)
                      .+.|.  +.||+|+||.||+|....+  .||||++........      .+              ++ ++...       
T Consensus        15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   94 (353)
T cd07850          15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQ   94 (353)
T ss_pred             hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccC
Confidence            35566  8999999999999998644  999999864321111      01              22 22110       


Q ss_pred             --cEEE--E-----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCcc---
Q 039505          208 --ALIT--I-----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHM---  255 (342)
Q Consensus       208 --~lv~--m-----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~~---  255 (342)
                        ++|+  +                       ++.||+|||+   .+|+||||||+||+++.+.  ++.+++.....   
T Consensus        95 ~~~lv~e~~~~~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~  171 (353)
T cd07850          95 DVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS  171 (353)
T ss_pred             cEEEEEeccCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccCccceeCCCC
Confidence              2333  1                       8899999999   8999999999999999883  44443322111   


Q ss_pred             --ccccccCcceee--------------------------cCCCCcccccccc-cccccc--------------------
Q 039505          256 --STTIAGTAGFLN--------------------------TKNPVISKSIENG-NSHLRD--------------------  286 (342)
Q Consensus       256 --~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~-~~~l~~--------------------  286 (342)
                        .....|+..|+|                          +|+.|+....... ...+..                    
T Consensus       172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (353)
T cd07850         172 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNY  251 (353)
T ss_pred             CCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHH
Confidence              122356777877                          8888875432100 000000                    


Q ss_pred             ------------cccccccC----CCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          287 ------------KSTVDLSF----KGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       287 ------------~~~~d~~l----~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                                  .+.....+    ....+......+.+++.+|++.+|++|||+.|++.
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~  310 (353)
T cd07850         252 VENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ  310 (353)
T ss_pred             hhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence                        00000000    00001123456789999999999999999999984

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.61  E-value=2.3e-15  Score=141.72  Aligned_cols=76  Identities=22%  Similarity=0.362  Sum_probs=54.3

Q ss_pred             cccCcC--CCeeEEEEEECC-C-eEEEEEccCCCCCCCc-c-------------------EE-EeeCC---cEEE--E--
Q 039505          165 RVPYKG--GFITVYHGQLVK-S-EVAMKMLSPSSSQGHV-P-------------------IV-ECHVG---ALIT--I--  212 (342)
Q Consensus       165 ~~lG~G--~fG~Vykg~~~~-~-~vAVK~l~~~~~~~~~-~-------------------Lv-~c~~~---~lv~--m--  212 (342)
                      ..||+|  +||+||++++.. + .||||++......... +                   +. ++..+   ++++  +  
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~   83 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY   83 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence            356666  999999999854 4 9999998754322110 0                   22 33222   3332  1  


Q ss_pred             --------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC
Q 039505          213 --------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK  243 (342)
Q Consensus       213 --------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~  243 (342)
                                                ++.||+|||+   .+|+||||||+|||++.+
T Consensus        84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivHrDlkp~Nill~~~  137 (328)
T cd08226          84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQ---NGYIHRNIKASHILISGD  137 (328)
T ss_pred             CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEeCC
Confidence                                      7999999999   899999999999999977

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.60  E-value=2.2e-15  Score=136.60  Aligned_cols=158  Identities=18%  Similarity=0.185  Sum_probs=99.2

Q ss_pred             cCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc--c-------------------EE-EeeCC---cEEE--E-----
Q 039505          167 PYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV--P-------------------IV-ECHVG---ALIT--I-----  212 (342)
Q Consensus       167 lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~--~-------------------Lv-~c~~~---~lv~--m-----  212 (342)
                      ||+|+||.||+|+....  .+|+|++.........  +                   ++ .+..+   ++++  +     
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            79999999999998754  9999998754322111  0                   22 33333   3333  1     


Q ss_pred             ---------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCccc-----cccccCcc
Q 039505          213 ---------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHMS-----TTIAGTAG  264 (342)
Q Consensus       213 ---------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~~-----~~~~Gt~~  264 (342)
                                           +++||+|||+   .+++|+||||+||+++.+  .++.+++......     ....|+..
T Consensus        81 ~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~  157 (262)
T cd05572          81 WTILRDRGLFDEYTARFYIACVVLAFEYLHN---RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPE  157 (262)
T ss_pred             HHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcC
Confidence                                 8899999999   999999999999999988  3444333222111     12346666


Q ss_pred             eee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccC
Q 039505          265 FLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKV  318 (342)
Q Consensus       265 y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P  318 (342)
                      |++                          +|+.|+.....+.. .+. ..+.+.......+......+.+++.+||+.+|
T Consensus       158 ~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p  235 (262)
T cd05572         158 YVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPM-EIY-NDILKGNGKLEFPNYIDKAAKDLIKQLLRRNP  235 (262)
T ss_pred             ccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHH-HHH-HHHhccCCCCCCCcccCHHHHHHHHHHccCCh
Confidence            776                          78888765442110 011 11111111112222335668999999999999


Q ss_pred             CCCCC-----HHHHHH
Q 039505          319 NRRPL-----MNQVVM  329 (342)
Q Consensus       319 ~~RPs-----m~eV~~  329 (342)
                      ++||+     +.|+++
T Consensus       236 ~~R~~~~~~~~~~l~~  251 (262)
T cd05572         236 EERLGNLKGGIKDIKK  251 (262)
T ss_pred             hhCcCCcccCHHHHhc
Confidence            99999     566554

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.60  E-value=1.2e-15  Score=144.00  Aligned_cols=100  Identities=23%  Similarity=0.298  Sum_probs=67.7

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCC--CCC-----cc-----------E---E-EeeCC---cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSS--QGH-----VP-----------I---V-ECHVG---ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~--~~~-----~~-----------L---v-~c~~~---~lv~--m---  212 (342)
                      +.||+|+||+||++.+..+  .+|+|++.....  ...     .+           +   . ++...   ++|+  +   
T Consensus         7 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~~~g   86 (332)
T cd05623           7 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYVGG   86 (332)
T ss_pred             EEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEeccCCC
Confidence            8899999999999998765  899999854210  000     00           1   1 22222   3333  1   


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-------ccccc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-------MSTTI  259 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-------~~~~~  259 (342)
                                              ++.||+|||+   .+|+||||||+|||++.+  .++.+++....       .....
T Consensus        87 ~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~---~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~~~~  163 (332)
T cd05623          87 DLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVA  163 (332)
T ss_pred             cHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEeecchheecccCCcceeccc
Confidence                                    7899999999   999999999999999987  44444432211       11225


Q ss_pred             ccCcceee
Q 039505          260 AGTAGFLN  267 (342)
Q Consensus       260 ~Gt~~y~a  267 (342)
                      .||+.|+|
T Consensus       164 ~gt~~y~a  171 (332)
T cd05623         164 VGTPDYIS  171 (332)
T ss_pred             ccCccccC
Confidence            68888887

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.60  E-value=3.1e-15  Score=135.30  Aligned_cols=161  Identities=17%  Similarity=0.195  Sum_probs=98.3

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc------------------EE-EeeCC---cEEE--E------
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP------------------IV-ECHVG---ALIT--I------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~------------------Lv-~c~~~---~lv~--m------  212 (342)
                      +.||+|+||.||+|....+  .+|+|.+........+.                  +. +...+   ++++  +      
T Consensus         9 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l~   88 (262)
T cd06613           9 QRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQ   88 (262)
T ss_pred             EEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCCCCcHH
Confidence            7899999999999998654  89999987654332111                  22 22222   2222  1      


Q ss_pred             ---------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc------cccccccCc
Q 039505          213 ---------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH------MSTTIAGTA  263 (342)
Q Consensus       213 ---------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~------~~~~~~Gt~  263 (342)
                                           ++.||+|||+   .+++|+||||+||+++++.  ++.+++....      ......++.
T Consensus        89 ~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~  165 (262)
T cd06613          89 DIYQVTRGPLSELQIAYVCRETLKGLAYLHE---TGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFIGTP  165 (262)
T ss_pred             HHHHhhccCCCHHHHHHHHHHHHHHHHHHHh---CCceecCCChhhEEECCCCCEEECccccchhhhhhhhccccccCCc
Confidence                                 7999999999   8999999999999999883  3333322111      111234555


Q ss_pred             ceee-----------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcc
Q 039505          264 GFLN-----------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASV  314 (342)
Q Consensus       264 ~y~a-----------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl  314 (342)
                      .|+|                             ||+.|+..................+.. ..........+.+++.+||
T Consensus       166 ~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l  244 (262)
T cd06613         166 YWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPK-LKDKEKWSPVFHDFIKKCL  244 (262)
T ss_pred             cccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCcc-ccchhhhhHHHHHHHHHHc
Confidence            5555                             666666543211100000011011111 0112233456889999999


Q ss_pred             cccCCCCCCHHHHHH
Q 039505          315 SSKVNRRPLMNQVVM  329 (342)
Q Consensus       315 ~~~P~~RPsm~eV~~  329 (342)
                      +.+|.+|||+.+|+.
T Consensus       245 ~~~p~~Rpt~~~il~  259 (262)
T cd06613         245 TKDPKKRPTATKLLQ  259 (262)
T ss_pred             CCChhhCCCHHHHhc
Confidence            999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.60  E-value=2.5e-15  Score=138.67  Aligned_cols=165  Identities=18%  Similarity=0.186  Sum_probs=97.6

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC------cc---------------EE-EeeCC--------
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH------VP---------------IV-ECHVG--------  207 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~------~~---------------Lv-~c~~~--------  207 (342)
                      +|+  +.||+|+||.||+|.+..+  .||||++........      .+               +. ++...        
T Consensus         2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~   81 (295)
T cd07837           2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSL   81 (295)
T ss_pred             CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceE
Confidence            455  8899999999999998754  999998765432110      11               12 22110        


Q ss_pred             cEEE--E------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecC-C--CccccCCCC
Q 039505          208 ALIT--I------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNE-K--SRISPVEGG  252 (342)
Q Consensus       208 ~lv~--m------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~-~--a~~~~~~~~  252 (342)
                      ++++  +                              +++||+|||+   .+|+||||||+||+++. +  .++.+++..
T Consensus        82 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~~~nil~~~~~~~~kl~dfg~~  158 (295)
T cd07837          82 YLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHK---HGVMHRDLKPQNLLVDKQKGLLKIADLGLG  158 (295)
T ss_pred             EEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEecCCCeEEEeecccc
Confidence            1222  1                              8899999999   99999999999999998 4  444443322


Q ss_pred             Ccc------ccccccCcceee---------------------------cCCCCcccccccc-cccccc----------cc
Q 039505          253 THM------STTIAGTAGFLN---------------------------TKNPVISKSIENG-NSHLRD----------KS  288 (342)
Q Consensus       253 ~~~------~~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~-~~~l~~----------~~  288 (342)
                      ...      .....+++.|+|                           ||+.|+....... ...+..          ..
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (295)
T cd07837         159 RAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPG  238 (295)
T ss_pred             eecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcc
Confidence            110      011234455555                           7777775432111 000000          00


Q ss_pred             c---c----cccCCCC----CChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          289 T---V----DLSFKGE----FDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       289 ~---~----d~~l~~~----~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      .   .    -+.....    .......++.+++.+||+.+|++||++.|++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~  290 (295)
T cd07837         239 VSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT  290 (295)
T ss_pred             hhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence            0   0    0000000    00123455889999999999999999999874

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.60  E-value=1.9e-15  Score=138.49  Aligned_cols=162  Identities=15%  Similarity=0.211  Sum_probs=99.0

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc-------------------EE-EeeCC---cEEE--E-----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP-------------------IV-ECHVG---ALIT--I-----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~---~lv~--m-----  212 (342)
                      +.||+|++|.||+|+...+  .||||+++........+                   +. +|...   ++++  +     
T Consensus         6 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~l~   85 (284)
T cd07836           6 EKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMDKDLK   85 (284)
T ss_pred             eeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCCccHH
Confidence            8899999999999998754  89999987654322111                   33 33332   3333  1     


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------ccccccc
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIAG  261 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~G  261 (342)
                                             +++||+|||+   .+++||||||+||+++++  .++.+++....      ......+
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~  162 (284)
T cd07836          86 KYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHE---NRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNEVV  162 (284)
T ss_pred             HHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccccccccc
Confidence                                   8899999999   899999999999999987  33333221110      1112334


Q ss_pred             Ccceee---------------------------cCCCCcccccccc-cccccc----------ccccc-ccCCCC-----
Q 039505          262 TAGFLN---------------------------TKNPVISKSIENG-NSHLRD----------KSTVD-LSFKGE-----  297 (342)
Q Consensus       262 t~~y~a---------------------------tG~~P~~~~~~~~-~~~l~~----------~~~~d-~~l~~~-----  297 (342)
                      +..|++                           ||+.|+....... ...+..          ..+.+ +.+...     
T Consensus       163 ~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (284)
T cd07836         163 TLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYP  242 (284)
T ss_pred             cccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCC
Confidence            555554                           7888876443211 000000          00000 000000     


Q ss_pred             ------CChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          298 ------FDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       298 ------~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                            ........+.+++.+|++.+|.+||++.++++
T Consensus       243 ~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  280 (284)
T cd07836         243 PQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ  280 (284)
T ss_pred             hHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence                  01122345788999999999999999999874

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.60  E-value=3.3e-15  Score=135.27  Aligned_cols=159  Identities=18%  Similarity=0.217  Sum_probs=97.4

Q ss_pred             cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCC--Ccc------------------EE-EeeCC---cEEE--E----
Q 039505          165 RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQG--HVP------------------IV-ECHVG---ALIT--I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~--~~~------------------Lv-~c~~~---~lv~--m----  212 (342)
                      +.||+|+||.||+|.... + .||+|.++......  ...                  ++ .+...   ++++  +    
T Consensus         6 ~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~   85 (264)
T cd06626           6 NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGGT   85 (264)
T ss_pred             eEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecCCCCc
Confidence            789999999999999864 4 99999987664320  100                  22 22222   3333  1    


Q ss_pred             ----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc----------ccc
Q 039505          213 ----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM----------STT  258 (342)
Q Consensus       213 ----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~----------~~~  258 (342)
                                            +++||+|||+   .+|+|+||||+||+++++  .++.+++.....          ...
T Consensus        86 L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~  162 (264)
T cd06626          86 LEELLEHGRILDEHVIRVYTLQLLEGLAYLHS---HGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQS  162 (264)
T ss_pred             HHHHHhhcCCCChHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccccC
Confidence                                  8999999999   999999999999999987  333333211110          001


Q ss_pred             cccCcceee-----------------------------cCCCCcccccccccccccc-cccccccCCCCCChHHHHHHHH
Q 039505          259 IAGTAGFLN-----------------------------TKNPVISKSIENGNSHLRD-KSTVDLSFKGEFDIISVGKAVE  308 (342)
Q Consensus       259 ~~Gt~~y~a-----------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~l~~~~~~~~~~~l~~  308 (342)
                      ..++..|++                             +|+.||........ .... .....+.++.  .......+.+
T Consensus       163 ~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~  239 (264)
T cd06626         163 LAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQ-IMFHVGAGHKPPIPD--SLQLSPEGKD  239 (264)
T ss_pred             CcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHH-HHHHHhcCCCCCCCc--ccccCHHHHH
Confidence            234455554                             67777754321110 0000 1111111211  1112455778


Q ss_pred             HHHHcccccCCCCCCHHHHHH
Q 039505          309 IAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       309 l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ++.+||+.+|++||++.+++.
T Consensus       240 li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         240 FLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             HHHHHccCCcccCCCHHHHhc
Confidence            999999999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.60  E-value=2.3e-15  Score=157.07  Aligned_cols=169  Identities=15%  Similarity=0.156  Sum_probs=105.4

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc------c--------------EE-Ee-eCC----cEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV------P--------------IV-EC-HVG----ALI  210 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~------~--------------Lv-~c-~~~----~lv  210 (342)
                      ++|.  +.||+|+||+||+|+....  .||+|.+.........      +              ++ ++ ...    ++|
T Consensus        13 ~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIV   92 (1021)
T PTZ00266         13 NEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYIL   92 (1021)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEE
Confidence            4455  8999999999999998766  8999998754322111      0              22 22 111    222


Q ss_pred             E--E------------------------------ehhhhhhhhccCC----CCeeeCCCCcceEEecCC-----------
Q 039505          211 T--I------------------------------PKEGLEYLHQGLK----HPIIQRDMKSTNILLNEK-----------  243 (342)
Q Consensus       211 ~--m------------------------------ia~gL~yLH~~~~----~~IiHrDlKp~NILLd~~-----------  243 (342)
                      +  +                              |+.||+|||+...    .+||||||||+||||+.+           
T Consensus        93 MEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~  172 (1021)
T PTZ00266         93 MEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQA  172 (1021)
T ss_pred             EeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccc
Confidence            2  1                              8899999998321    459999999999999752           


Q ss_pred             --------CccccCCCCCc-----cccccccCcceee----------------------------cCCCCcccccccccc
Q 039505          244 --------SRISPVEGGTH-----MSTTIAGTAGFLN----------------------------TKNPVISKSIENGNS  282 (342)
Q Consensus       244 --------a~~~~~~~~~~-----~~~~~~Gt~~y~a----------------------------tG~~P~~~~~~~~~~  282 (342)
                              .++.+++....     ......||+.|+|                            ||+.||.......  
T Consensus       173 ~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~--  250 (1021)
T PTZ00266        173 NNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFS--  250 (1021)
T ss_pred             cccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHH--
Confidence                    34444443321     1123568999987                            7888876432211  


Q ss_pred             cccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHH--HHHHhc
Q 039505          283 HLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVV--MVREQG  334 (342)
Q Consensus       283 ~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~--~~L~~i  334 (342)
                      .++..-...+.+..   ......+.+++..||+.+|.+||++.|++  ..+..+
T Consensus       251 qli~~lk~~p~lpi---~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i  301 (1021)
T PTZ00266        251 QLISELKRGPDLPI---KGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNV  301 (1021)
T ss_pred             HHHHHHhcCCCCCc---CCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence            11110000111111   11234588899999999999999999998  445433

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.60  E-value=2.7e-15  Score=139.31  Aligned_cols=159  Identities=16%  Similarity=0.171  Sum_probs=100.3

Q ss_pred             cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCCCcc------------------EE-EeeCC---cEEE--E------
Q 039505          165 RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQGHVP------------------IV-ECHVG---ALIT--I------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~~~~------------------Lv-~c~~~---~lv~--m------  212 (342)
                      ..||+|+||.||++.... + .||+|.+..........                  ++ ++..+   ++++  +      
T Consensus        27 ~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~  106 (297)
T cd06659          27 IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALT  106 (297)
T ss_pred             hhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHH
Confidence            579999999999998764 4 99999986543222111                  22 22222   3332  1      


Q ss_pred             -------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc------cccccccCcce
Q 039505          213 -------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH------MSTTIAGTAGF  265 (342)
Q Consensus       213 -------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~------~~~~~~Gt~~y  265 (342)
                                         ++.||+|||+   .+++||||||+||+++.+.  ++.+++....      ......|+..|
T Consensus       107 ~~~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y  183 (297)
T cd06659         107 DIVSQTRLNEEQIATVCESVLQALCYLHS---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYW  183 (297)
T ss_pred             HHHhhcCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceecCccc
Confidence                               8899999999   8999999999999999883  3333332111      11234677888


Q ss_pred             ee--------------------------cCCCCcccccccccccccc-cccccccCCCCCChHHHHHHHHHHHHcccccC
Q 039505          266 LN--------------------------TKNPVISKSIENGNSHLRD-KSTVDLSFKGEFDIISVGKAVEIAMASVSSKV  318 (342)
Q Consensus       266 ~a--------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P  318 (342)
                      +|                          +|+.|+.......  .+.. .....+..  .........+.+++..|++.+|
T Consensus       184 ~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~l~~~i~~~l~~~P  259 (297)
T cd06659         184 MAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQ--AMKRLRDSPPPKL--KNAHKISPVLRDFLERMLTREP  259 (297)
T ss_pred             cCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHhccCCCCc--cccCCCCHHHHHHHHHHhcCCc
Confidence            87                          7888876432211  0000 00000001  0111223457889999999999


Q ss_pred             CCCCCHHHHHHH
Q 039505          319 NRRPLMNQVVMV  330 (342)
Q Consensus       319 ~~RPsm~eV~~~  330 (342)
                      ++||++.++++.
T Consensus       260 ~~Rps~~~ll~~  271 (297)
T cd06659         260 QERATAQELLDH  271 (297)
T ss_pred             ccCcCHHHHhhC
Confidence            999999999873

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.60  E-value=1.2e-14  Score=140.09  Aligned_cols=166  Identities=14%  Similarity=0.209  Sum_probs=116.8

Q ss_pred             cCcccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCC-cc------------------EE-EeeCC---cEE--EE----
Q 039505          163 FERVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGH-VP------------------IV-ECHVG---ALI--TI----  212 (342)
Q Consensus       163 f~~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~-~~------------------Lv-~c~~~---~lv--~m----  212 (342)
                      |.+.||+|.||.|..|..... .||||.++....... ++                  |+ .|..+   .++  ||    
T Consensus       542 ~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnGD  621 (807)
T KOG1094|consen  542 FKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENGD  621 (807)
T ss_pred             hhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcCc
Confidence            448999999999999999887 999999988764433 21                  66 67554   222  23    


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc--------cccc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH--------MSTT  258 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~--------~~~~  258 (342)
                                              ||.||+||.+   .++|||||.+.|+|+|++  .|+.+++....        ....
T Consensus       622 LnqFl~aheapt~~t~~~vsi~tqiasgmaYLes---~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr  698 (807)
T KOG1094|consen  622 LNQFLSAHELPTAETAPGVSICTQIASGMAYLES---LNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGR  698 (807)
T ss_pred             HHHHHHhccCcccccchhHHHHHHHHHHHHHHHh---hchhhccccccceeecCcccEEecCcccccccccCCceeeecc
Confidence                                    8999999999   999999999999999999  66666543321        1122


Q ss_pred             cccCcceee----------------------------cCCCCcccccccccccccc--cccccccC---CCCCChHHHHH
Q 039505          259 IAGTAGFLN----------------------------TKNPVISKSIENGNSHLRD--KSTVDLSF---KGEFDIISVGK  305 (342)
Q Consensus       259 ~~Gt~~y~a----------------------------tG~~P~~~~~~~~~~~l~~--~~~~d~~l---~~~~~~~~~~~  305 (342)
                      .+-.+.|||                            +...|+....++.   +++  .++++..-   -...+..|+..
T Consensus       699 ~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~---vven~~~~~~~~~~~~~l~~P~~cp~~  775 (807)
T KOG1094|consen  699 AVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ---VVENAGEFFRDQGRQVVLSRPPACPQG  775 (807)
T ss_pred             eeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHH---HHHhhhhhcCCCCcceeccCCCcCcHH
Confidence            334467887                            5566666543321   111  12222111   11235567778


Q ss_pred             HHHHHHHcccccCCCCCCHHHHHHHHHhc
Q 039505          306 AVEIAMASVSSKVNRRPLMNQVVMVREQG  334 (342)
Q Consensus       306 l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i  334 (342)
                      +.++++.||..+-++||+++++...|++.
T Consensus       776 lyelml~Cw~~es~~RPsFe~lh~~lq~~  804 (807)
T KOG1094|consen  776 LYELMLRCWRRESEQRPSFEQLHLFLQED  804 (807)
T ss_pred             HHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence            99999999999999999999999888764

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.60  E-value=2.4e-15  Score=142.03  Aligned_cols=168  Identities=17%  Similarity=0.211  Sum_probs=102.0

Q ss_pred             hhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC------cc---------------EE-EeeCC-----c
Q 039505          160 TNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH------VP---------------IV-ECHVG-----A  208 (342)
Q Consensus       160 t~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~------~~---------------Lv-~c~~~-----~  208 (342)
                      .++|.  +.||+|+||.||+|....+  .+|||++........      .+               ++ +|...     +
T Consensus         6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~   85 (337)
T cd07852           6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY   85 (337)
T ss_pred             hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence            34555  8999999999999998754  899998854211100      00               22 33221     3


Q ss_pred             EEE--E------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------
Q 039505          209 LIT--I------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------  254 (342)
Q Consensus       209 lv~--m------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------  254 (342)
                      +|+  +                        ++.||+|||+   .+|+||||||+||+++++  .++.+++....      
T Consensus        86 lv~e~~~~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~  162 (337)
T cd07852          86 LVFEYMETDLHAVIRANILEDVHKRYIMYQLLKALKYIHS---GNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEE  162 (337)
T ss_pred             EEecccccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccchhccccccc
Confidence            333  1                        8899999999   999999999999999988  34443322110      


Q ss_pred             -----cccccccCcceee---------------------------cCCCCcccccccc-cccccc---------------
Q 039505          255 -----MSTTIAGTAGFLN---------------------------TKNPVISKSIENG-NSHLRD---------------  286 (342)
Q Consensus       255 -----~~~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~-~~~l~~---------------  286 (342)
                           ......|+..|+|                           ||+.|+....... ...+..               
T Consensus       163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (337)
T cd07852         163 NPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKS  242 (337)
T ss_pred             cccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHh
Confidence                 1122456777776                           7888775432110 000000               


Q ss_pred             ---cccccccCC------CCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHH
Q 039505          287 ---KSTVDLSFK------GEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMV  330 (342)
Q Consensus       287 ---~~~~d~~l~------~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~  330 (342)
                         ..+++....      ..........+.+++.+||+.+|++|||+.++++.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~  295 (337)
T cd07852         243 PFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH  295 (337)
T ss_pred             hhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence               000100000      00011134568899999999999999999999854

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.60  E-value=4.1e-15  Score=138.71  Aligned_cols=159  Identities=21%  Similarity=0.215  Sum_probs=97.6

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-------c--------------EE-EeeCC---cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-------P--------------IV-ECHVG---ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-------~--------------Lv-~c~~~---~lv~--m---  212 (342)
                      +.||+|+||.||+|....+  .+|+|.+.........       +              +. ++...   ++|+  +   
T Consensus        21 ~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  100 (308)
T cd06634          21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGS  100 (308)
T ss_pred             HheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEccCCC
Confidence            7899999999999998654  8999998643211110       1              22 33333   3333  1   


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc--cccccccCcce
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH--MSTTIAGTAGF  265 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~--~~~~~~Gt~~y  265 (342)
                                             ++.||.|||+   .+++||||||+||+++.+.  ++.+++....  ......|++.|
T Consensus       101 l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~y  177 (308)
T cd06634         101 ASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYW  177 (308)
T ss_pred             HHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHhEEECCCCcEEECCcccceeecCcccccCCccc
Confidence                                   7899999999   8999999999999999873  3333322211  11223455556


Q ss_pred             ee-----------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccc
Q 039505          266 LN-----------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSS  316 (342)
Q Consensus       266 ~a-----------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~  316 (342)
                      +|                             ||+.|+.......  ..  ..+................+.+++.+||+.
T Consensus       178 ~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  253 (308)
T cd06634         178 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS--AL--YHIAQNESPALQSGHWSEYFRNFVDSCLQK  253 (308)
T ss_pred             cCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH--HH--HHHhhcCCCCcCcccccHHHHHHHHHHhhC
Confidence            55                             5666654322111  00  000000000111123345588899999999


Q ss_pred             cCCCCCCHHHHHHH
Q 039505          317 KVNRRPLMNQVVMV  330 (342)
Q Consensus       317 ~P~~RPsm~eV~~~  330 (342)
                      +|++||++.+++..
T Consensus       254 ~P~~Rp~~~~ll~~  267 (308)
T cd06634         254 IPQDRPTSEVLLKH  267 (308)
T ss_pred             CcccCCCHHHHhhC
Confidence            99999999999865

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.60  E-value=1.5e-15  Score=143.39  Aligned_cols=103  Identities=22%  Similarity=0.305  Sum_probs=69.2

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-------c--------------EE-EeeCC---cEEE-
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-------P--------------IV-ECHVG---ALIT-  211 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-------~--------------Lv-~c~~~---~lv~-  211 (342)
                      +|.  +.||+|+||+||+++...+  .||+|++.........       +              +. ++...   ++|+ 
T Consensus         2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~E   81 (331)
T cd05624           2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMD   81 (331)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence            444  8899999999999998765  8999998642111000       0              22 22222   3333 


Q ss_pred             -E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-------
Q 039505          212 -I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-------  254 (342)
Q Consensus       212 -m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-------  254 (342)
                       +                           ++.||+|||+   .+|+||||||+|||++.+  .++.+++....       
T Consensus        82 y~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~---~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~  158 (331)
T cd05624          82 YYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQ---LHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTV  158 (331)
T ss_pred             CCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCce
Confidence             1                           7899999999   999999999999999987  44444432211       


Q ss_pred             cccccccCcceee
Q 039505          255 MSTTIAGTAGFLN  267 (342)
Q Consensus       255 ~~~~~~Gt~~y~a  267 (342)
                      ......||++|+|
T Consensus       159 ~~~~~~gt~~y~a  171 (331)
T cd05624         159 QSSVAVGTPDYIS  171 (331)
T ss_pred             eeccccCCcccCC
Confidence            1122468888887

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.60  E-value=2.7e-15  Score=136.07  Aligned_cols=161  Identities=16%  Similarity=0.179  Sum_probs=100.4

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc-------------------EE-EeeCC---cEEE--E-----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP-------------------IV-ECHVG---ALIT--I-----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~---~lv~--m-----  212 (342)
                      +.||+|+||.||++.+...  .+|+|.+..........                   +. .|..+   ++++  +     
T Consensus         7 ~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   86 (265)
T cd06605           7 GELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSL   86 (265)
T ss_pred             HHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCCCcH
Confidence            7899999999999999754  89999987654321111                   11 22221   2222  1     


Q ss_pred             ----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCcc----ccccccCcc
Q 039505          213 ----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHM----STTIAGTAG  264 (342)
Q Consensus       213 ----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~~----~~~~~Gt~~  264 (342)
                                            +++||+|||+.  .+++||||||+||+++++.  ++.+++.....    .....|+..
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~--~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~  164 (265)
T cd06605          87 DKILKEVQGRIPERILGKIAVAVLKGLTYLHEK--HKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFVGTSS  164 (265)
T ss_pred             HHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCC--CCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhcccCChh
Confidence                                  78999999983  6899999999999999984  33333222111    111456677


Q ss_pred             eee--------------------------cCCCCcccccccccccccc--cccccccCCCCCChH-HHHHHHHHHHHccc
Q 039505          265 FLN--------------------------TKNPVISKSIENGNSHLRD--KSTVDLSFKGEFDII-SVGKAVEIAMASVS  315 (342)
Q Consensus       265 y~a--------------------------tG~~P~~~~~~~~~~~l~~--~~~~d~~l~~~~~~~-~~~~l~~l~~~Cl~  315 (342)
                      |+|                          ||+.|+........ ...+  ........ ...+.. ....+.+++..||.
T Consensus       165 y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~  242 (265)
T cd06605         165 YMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPD-GIFELLQYIVNEPP-PRLPSGKFSPDFQDFVNLCLI  242 (265)
T ss_pred             ccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccc-cHHHHHHHHhcCCC-CCCChhhcCHHHHHHHHHHcC
Confidence            776                          78888765421110 1111  11111111 011111 44558899999999


Q ss_pred             ccCCCCCCHHHHHH
Q 039505          316 SKVNRRPLMNQVVM  329 (342)
Q Consensus       316 ~~P~~RPsm~eV~~  329 (342)
                      .+|++|||+.+++.
T Consensus       243 ~~p~~Rpt~~~ll~  256 (265)
T cd06605         243 KDPRERPSYKELLE  256 (265)
T ss_pred             CCchhCcCHHHHhh
Confidence            99999999999875

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.60  E-value=1.6e-15  Score=143.09  Aligned_cols=100  Identities=21%  Similarity=0.279  Sum_probs=67.3

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC-------cc--------------EE-EeeCC---cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH-------VP--------------IV-ECHVG---ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~-------~~--------------Lv-~c~~~---~lv~--m---  212 (342)
                      +.||+|+||+||+++....  .||||++........       .+              +. ++..+   ++|+  +   
T Consensus         7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~   86 (331)
T cd05597           7 KVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYVGG   86 (331)
T ss_pred             EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEecCCCC
Confidence            8899999999999998754  999999864211000       00              22 22222   2222  1   


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-------ccccc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-------MSTTI  259 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-------~~~~~  259 (342)
                                              ++.||+|||+   .+|+||||||+|||++.+  .++.+++....       .....
T Consensus        87 ~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  163 (331)
T cd05597          87 DLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQ---LGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVA  163 (331)
T ss_pred             cHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCccccce
Confidence                                    8899999999   999999999999999987  44444432211       11124


Q ss_pred             ccCcceee
Q 039505          260 AGTAGFLN  267 (342)
Q Consensus       260 ~Gt~~y~a  267 (342)
                      .||+.|+|
T Consensus       164 ~gt~~y~a  171 (331)
T cd05597         164 VGTPDYIS  171 (331)
T ss_pred             eccccccC
Confidence            58888877

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.59  E-value=2.5e-15  Score=137.77  Aligned_cols=162  Identities=15%  Similarity=0.174  Sum_probs=98.3

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC-cc-------------------EE-EeeCC---cEEE--E----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH-VP-------------------IV-ECHVG---ALIT--I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~-~~-------------------Lv-~c~~~---~lv~--m----  212 (342)
                      +.||+|+||.||+|.+..+  .||||++........ .+                   ++ ++..+   ++|+  +    
T Consensus         6 ~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L   85 (286)
T cd07832           6 GRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYMPSDL   85 (286)
T ss_pred             eecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecccCCCH
Confidence            7899999999999998644  999999876542111 11                   22 22222   3333  1    


Q ss_pred             ----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-------ccccccc
Q 039505          213 ----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-------MSTTIAG  261 (342)
Q Consensus       213 ----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-------~~~~~~G  261 (342)
                                            +++||+|||+   .+++|+||||+||+++.+  .++.+++....       ......|
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  162 (286)
T cd07832          86 SEVLRDEERPLPEAQVKSYMRMLLKGVAYMHA---NGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVA  162 (286)
T ss_pred             HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccccccC
Confidence                                  8899999999   999999999999999987  33333321111       1122356


Q ss_pred             Ccceee---------------------------cCCCCcccccccc-cccccc-------------------cccccccC
Q 039505          262 TAGFLN---------------------------TKNPVISKSIENG-NSHLRD-------------------KSTVDLSF  294 (342)
Q Consensus       262 t~~y~a---------------------------tG~~P~~~~~~~~-~~~l~~-------------------~~~~d~~l  294 (342)
                      +..|+|                           ||++|+....+.. ...+..                   ..+..+.-
T Consensus       163 ~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (286)
T cd07832         163 TRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPES  242 (286)
T ss_pred             cccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCC
Confidence            666665                           7766664332111 000000                   00000000


Q ss_pred             C----CCCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          295 K----GEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       295 ~----~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      .    .....+....+.+++.+|++.+|++||++++++.
T Consensus       243 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~  281 (286)
T cd07832         243 KPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR  281 (286)
T ss_pred             CcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            0    0001122367889999999999999999999975

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.59  E-value=1e-15  Score=152.61  Aligned_cols=156  Identities=21%  Similarity=0.254  Sum_probs=106.3

Q ss_pred             cccCcCCCee-EEEEEECCCeEEEEEccCCCCC-CCcc------------EE--EeeCC--cEEE--E------------
Q 039505          165 RVPYKGGFIT-VYHGQLVKSEVAMKMLSPSSSQ-GHVP------------IV--ECHVG--ALIT--I------------  212 (342)
Q Consensus       165 ~~lG~G~fG~-Vykg~~~~~~vAVK~l~~~~~~-~~~~------------Lv--~c~~~--~lv~--m------------  212 (342)
                      +++|.|+.|+ ||+|...+.+||||++-..... ..+|            +|  ||.+.  ...|  +            
T Consensus       515 eilG~Gs~Gt~Vf~G~ye~R~VAVKrll~e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~sL~dlie  594 (903)
T KOG1027|consen  515 EILGYGSNGTVVFRGVYEGREVAVKRLLEEFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCACSLQDLIE  594 (903)
T ss_pred             HHcccCCCCcEEEEEeeCCceehHHHHhhHhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhhhHHHHHh
Confidence            7899999985 8999998889999998655321 1111            66  88876  4444  1            


Q ss_pred             --------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-------CccccCCCC-------C--ccc
Q 039505          213 --------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-------SRISPVEGG-------T--HMS  256 (342)
Q Consensus       213 --------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-------a~~~~~~~~-------~--~~~  256 (342)
                                          +++||++||+   .+||||||||.||||+..       |++.+++..       +  ...
T Consensus       595 ~~~~d~~~~~~i~~~~~l~q~~~GlaHLHs---l~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~  671 (903)
T KOG1027|consen  595 SSGLDVEMQSDIDPISVLSQIASGLAHLHS---LKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRL  671 (903)
T ss_pred             ccccchhhcccccHHHHHHHHHHHHHHHHh---cccccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcc
Confidence                                8899999999   999999999999999983       334333321       1  112


Q ss_pred             cccccCcceee---------------------------cCCCCcccccccccccccc-cccccccCCCCCChHHHHHHHH
Q 039505          257 TTIAGTAGFLN---------------------------TKNPVISKSIENGNSHLRD-KSTVDLSFKGEFDIISVGKAVE  308 (342)
Q Consensus       257 ~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~l~~~~~~~~~~~l~~  308 (342)
                      ....||-||+|                           -|+.||........ +++. ..-++ .+..  ..++  ...+
T Consensus       672 s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~-NIl~~~~~L~-~L~~--~~d~--eA~d  745 (903)
T KOG1027|consen  672 SGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA-NILTGNYTLV-HLEP--LPDC--EAKD  745 (903)
T ss_pred             cCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhh-hhhcCcccee-eecc--CchH--HHHH
Confidence            34789999999                           45888876543321 2221 00111 1111  1112  5788


Q ss_pred             HHHHcccccCCCCCCHHHHHH
Q 039505          309 IAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       309 l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      |+.+++..+|..||++.+|+.
T Consensus       746 LI~~ml~~dP~~RPsa~~VL~  766 (903)
T KOG1027|consen  746 LISRMLNPDPQLRPSATDVLN  766 (903)
T ss_pred             HHHHhcCCCcccCCCHHHHhC
Confidence            999999999999999999863

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.59  E-value=4e-15  Score=137.58  Aligned_cols=77  Identities=25%  Similarity=0.408  Sum_probs=58.0

Q ss_pred             cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCC---C--C----cc--------------EE-EeeCC---cEEE--E-
Q 039505          165 RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQ---G--H----VP--------------IV-ECHVG---ALIT--I-  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~---~--~----~~--------------Lv-~c~~~---~lv~--m-  212 (342)
                      +.||+|+||.||+|.... + .||||.+......   .  .    .+              ++ ++...   ++|+  + 
T Consensus         6 ~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (298)
T cd07841           6 KKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVFEFME   85 (298)
T ss_pred             eeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEEcccC
Confidence            789999999999999864 4 9999999765432   0  0    01              22 33222   3333  1 


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS  244 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a  244 (342)
                                               +++||+|||+   .+|+||||||+||+++.+.
T Consensus        86 ~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nill~~~~  139 (298)
T cd07841          86 TDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHS---NWILHRDLKPNNLLIASDG  139 (298)
T ss_pred             CCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCChhhEEEcCCC
Confidence                                     8999999999   8999999999999999883

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.59  E-value=2.4e-15  Score=137.90  Aligned_cols=162  Identities=14%  Similarity=0.159  Sum_probs=97.4

Q ss_pred             cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCCC------cc--------------EE-EeeCC---cEEE--E----
Q 039505          165 RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQGH------VP--------------IV-ECHVG---ALIT--I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~~------~~--------------Lv-~c~~~---~lv~--m----  212 (342)
                      +.||+|++|.||+|.... + .||+|++........      .+              +. +|..+   ++++  +    
T Consensus         5 ~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~~~l   84 (283)
T cd07835           5 EKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLDLDL   84 (283)
T ss_pred             eEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccCcCH
Confidence            789999999999999864 4 999999875432111      01              22 33333   3333  1    


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc------ccccccc
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH------MSTTIAG  261 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~------~~~~~~G  261 (342)
                                             +++||+|||+   .+++||||+|+||+++.+.  ++.+++....      ......+
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~---~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~  161 (283)
T cd07835          85 KKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHS---HRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHEVV  161 (283)
T ss_pred             HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCcccc
Confidence                                   8899999999   8999999999999999883  3333322111      0111234


Q ss_pred             Ccceee---------------------------cCCCCcccccccc-cccccc-----c-----------ccc--cccCC
Q 039505          262 TAGFLN---------------------------TKNPVISKSIENG-NSHLRD-----K-----------STV--DLSFK  295 (342)
Q Consensus       262 t~~y~a---------------------------tG~~P~~~~~~~~-~~~l~~-----~-----------~~~--d~~l~  295 (342)
                      +..|+|                           ||+.|+....... ...+.+     .           +..  -+...
T Consensus       162 ~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (283)
T cd07835         162 TLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWA  241 (283)
T ss_pred             ccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhccccc
Confidence            555554                           7888875432110 000000     0           000  00000


Q ss_pred             ----CCCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          296 ----GEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       296 ----~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                          ..........+.+++.+|++.+|++|||+.|++.
T Consensus       242 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~  279 (283)
T cd07835         242 RQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ  279 (283)
T ss_pred             ccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence                0011122356889999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.59  E-value=4e-15  Score=137.80  Aligned_cols=160  Identities=21%  Similarity=0.195  Sum_probs=100.4

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc---------------EE----EeeCC---cEEE--E------
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP---------------IV----ECHVG---ALIT--I------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~---------------Lv----~c~~~---~lv~--m------  212 (342)
                      +.||+|+||.||+|....+  .||+|.+..........               ++    +|..+   ++|+  +      
T Consensus        25 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~  104 (293)
T cd06647          25 EKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLT  104 (293)
T ss_pred             eEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecCCCCcHH
Confidence            8899999999999987543  89999986543221111               22    23222   3333  1      


Q ss_pred             -------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------cccccccCcce
Q 039505          213 -------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIAGTAGF  265 (342)
Q Consensus       213 -------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~Gt~~y  265 (342)
                                         ++.||.|||+   .+++||||||+||+++.+  .++.+++....      ......|++.|
T Consensus       105 ~~~~~~~l~~~~~~~i~~~l~~al~~LH~---~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y  181 (293)
T cd06647         105 DVVTETCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYW  181 (293)
T ss_pred             HHHhhcCCCHHHHHHHHHHHHHHHHHHHh---CCEeeccCCHHHEEEcCCCCEEEccCcceecccccccccccccCChhh
Confidence                               8899999999   999999999999999987  34444332111      11123466666


Q ss_pred             ee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCC
Q 039505          266 LN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVN  319 (342)
Q Consensus       266 ~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~  319 (342)
                      ++                          +|+.||.......  .+... ...+......+......+.+++.+||+.+|+
T Consensus       182 ~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~  258 (293)
T cd06647         182 MAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR--ALYLI-ATNGTPELQNPEKLSAIFRDFLNRCLEMDVE  258 (293)
T ss_pred             cCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhh--heeeh-hcCCCCCCCCccccCHHHHHHHHHHccCChh
Confidence            66                          7888886543221  11100 0011100111222344578899999999999


Q ss_pred             CCCCHHHHHHH
Q 039505          320 RRPLMNQVVMV  330 (342)
Q Consensus       320 ~RPsm~eV~~~  330 (342)
                      +||++.+++..
T Consensus       259 ~Rp~~~~il~h  269 (293)
T cd06647         259 KRGSAKELLQH  269 (293)
T ss_pred             hCcCHHHHhcC
Confidence            99999999854

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>PF12819 Malectin_like: Carbohydrate-binding protein of the ER; InterPro: IPR024788 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan []

Probab=99.59  E-value=8.4e-16  Score=145.76  Aligned_cols=88  Identities=40%  Similarity=0.666  Sum_probs=73.6

Q ss_pred             cCCCCC-----cccCCcceEEecCcchhccCcccccchhh---cchhhhccccccccCCCCcCccccccc--cCCcceeE
Q 039505           25 HEAGSS-----YTEASTKLKYISDTNYIETGLAKSILLQH---RRAKQQQVWSLRSFPDGIRNCYRFNLT--RDSKYLIR   94 (342)
Q Consensus        25 ~~~~~~-----~~~~~~~~~~~~d~~~~~~g~~~~~~~~~---~~~~~~~~~~~r~fp~~~~~C~~l~~~--~~~~~llr   94 (342)
                      |+||+.     |+|+.||++|++|++|+++|++++|+...   .....++++++|+||+|.+|||+|++.  .|.+|+||
T Consensus         1 IdCG~~~~~s~y~D~~tg~~~~~D~~~~~~g~~~~i~~~~~~~~~~~~~~y~taR~F~~g~r~cY~l~~~~~~~~~yliR   80 (347)
T PF12819_consen    1 IDCGSSSNSSSYVDDSTGRTWVSDDDFIDTGKSGNISSQPDSSSSDSSPPYQTARIFPEGSRNCYTLPVTPPGGGKYLIR   80 (347)
T ss_pred             CcCCCCCCCcccccCCCCcEEeCCCCcccCCCccccccccCCcCCccccccceEEEcCCCCccEEEeeccCCCCceEEEE
Confidence            567743     99999999999999999999999995332   235678999999999999999999976  67899999


Q ss_pred             EeeeccCcCCCC-----CCCCCC
Q 039505           95 TTFIHGNYDEQN-----ILPDFK  112 (342)
Q Consensus        95 ~~fl~gN~~~~~-----~pp~f~  112 (342)
                      +.|++|||+..+     .|+.|+
T Consensus        81 l~F~~gnyd~~~fs~~~~~~~Fd  103 (347)
T PF12819_consen   81 LHFYYGNYDGLNFSVSSSPPTFD  103 (347)
T ss_pred             EEeccccccccccccccCCcceE
Confidence            999999999542     256665

This entry represents a malectin-like domain found in a number of plant receptor kinases.

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.59  E-value=6.5e-15  Score=137.74  Aligned_cols=158  Identities=20%  Similarity=0.218  Sum_probs=97.5

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-------c--------------EE-EeeCC---cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-------P--------------IV-ECHVG---ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-------~--------------Lv-~c~~~---~lv~--m---  212 (342)
                      +.||+|+||+||+|+...+  .||+|++.........       +              +. +|.++   ++++  +   
T Consensus        27 ~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  106 (313)
T cd06633          27 HEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCLGS  106 (313)
T ss_pred             eeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCCCC
Confidence            6799999999999998654  8999998754322111       1              22 33333   3333  1   


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc--ccccccCcce
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM--STTIAGTAGF  265 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~--~~~~~Gt~~y  265 (342)
                                             ++.||.|||+   .+++||||||+||+++++  .++.+++.....  .....|+..|
T Consensus       107 l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~y  183 (313)
T cd06633         107 ASDLLEVHKKPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVGTPYW  183 (313)
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChhhEEECCCCCEEEeecCCCcccCCCCCccccccc
Confidence                                   8899999999   899999999999999987  344443322111  1224456666


Q ss_pred             ee-----------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccc
Q 039505          266 LN-----------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSS  316 (342)
Q Consensus       266 ~a-----------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~  316 (342)
                      +|                             +|+.|+.......  .+..  .................+.+++.+||+.
T Consensus       184 ~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~l~~li~~~l~~  259 (313)
T cd06633         184 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS--ALYH--IAQNDSPTLQSNEWTDSFRGFVDYCLQK  259 (313)
T ss_pred             cChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH--HHHH--HHhcCCCCCCccccCHHHHHHHHHHccC
Confidence            55                             5666655432111  0000  0000000111112234578899999999


Q ss_pred             cCCCCCCHHHHHH
Q 039505          317 KVNRRPLMNQVVM  329 (342)
Q Consensus       317 ~P~~RPsm~eV~~  329 (342)
                      +|.+||++.+++.
T Consensus       260 ~P~~Rp~~~~~l~  272 (313)
T cd06633         260 IPQERPASAELLR  272 (313)
T ss_pred             ChhhCcCHHHHhc
Confidence            9999999999885

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.59  E-value=3.9e-15  Score=136.58  Aligned_cols=162  Identities=14%  Similarity=0.154  Sum_probs=96.3

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC------cc--------------------------EE--EeeCCc
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH------VP--------------------------IV--ECHVGA  208 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~------~~--------------------------Lv--~c~~~~  208 (342)
                      +.||+|+||.||+|.....  .||+|+++.......      .+                          ++  ||..+.
T Consensus         6 ~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~l   85 (284)
T cd07839           6 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCDQDL   85 (284)
T ss_pred             EEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCCCCH
Confidence            7899999999999998754  999999865422111      11                          11  333220


Q ss_pred             EEE-------E-----------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc------cccccccC
Q 039505          209 LIT-------I-----------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH------MSTTIAGT  262 (342)
Q Consensus       209 lv~-------m-----------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~------~~~~~~Gt  262 (342)
                      +-+       +           +++||.|||+   .+|+||||||+||+++.+.  ++.+++....      ......++
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  162 (284)
T cd07839          86 KKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHS---HNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAEVVT  162 (284)
T ss_pred             HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCCCccc
Confidence            000       0           8999999999   9999999999999999873  3333322111      11123456


Q ss_pred             cceee---------------------------cCCCCcccccccc--cccccc-------------ccccccc----CCC
Q 039505          263 AGFLN---------------------------TKNPVISKSIENG--NSHLRD-------------KSTVDLS----FKG  296 (342)
Q Consensus       263 ~~y~a---------------------------tG~~P~~~~~~~~--~~~l~~-------------~~~~d~~----l~~  296 (342)
                      ..|+|                           ||..|+.......  ...+..             ....+..    ...
T Consensus       163 ~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (284)
T cd07839         163 LWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPA  242 (284)
T ss_pred             cCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCC
Confidence            66666                           6777754322110  000000             0000000    000


Q ss_pred             -----CCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          297 -----EFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       297 -----~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                           .........+.+++.+||+.+|++|||+.+++.
T Consensus       243 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~  280 (284)
T cd07839         243 TTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ  280 (284)
T ss_pred             cchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence                 001122356788999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.59  E-value=3.6e-15  Score=134.63  Aligned_cols=158  Identities=16%  Similarity=0.200  Sum_probs=99.1

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC--c----c--------------EE-EeeCC---cEEE--E----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH--V----P--------------IV-ECHVG---ALIT--I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~--~----~--------------Lv-~c~~~---~lv~--m----  212 (342)
                      ++||+|+||.||.++....  .+++|.+........  .    +              ++ ++.+.   ++++  +    
T Consensus         6 ~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~~~~   85 (256)
T cd08221           6 RVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGT   85 (256)
T ss_pred             eEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecCCCc
Confidence            8999999999999987654  899998865432111  0    1              22 22222   2222  1    


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc------cccccc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH------MSTTIA  260 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~------~~~~~~  260 (342)
                                              +++||.|||+   .+++||||||+||+++++.  ++.+++....      ......
T Consensus        86 L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~~  162 (256)
T cd08221          86 LYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHK---AGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAETVV  162 (256)
T ss_pred             HHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChHhEEEeCCCCEEECcCcceEEcccccccccccC
Confidence                                    7889999999   8999999999999999883  3333322111      112245


Q ss_pred             cCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcc
Q 039505          261 GTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASV  314 (342)
Q Consensus       261 Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl  314 (342)
                      |++.|+|                          +|+.|+.......   .. ..+..... ...+......+.+++.+||
T Consensus       163 ~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~---~~-~~~~~~~~-~~~~~~~~~~~~~~i~~~l  237 (256)
T cd08221         163 GTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLN---LV-VKIVQGNY-TPVVSVYSSELISLVHSLL  237 (256)
T ss_pred             CCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHH---HH-HHHHcCCC-CCCccccCHHHHHHHHHHc
Confidence            6777766                          6666665432111   00 01111111 1112233456889999999


Q ss_pred             cccCCCCCCHHHHHHH
Q 039505          315 SSKVNRRPLMNQVVMV  330 (342)
Q Consensus       315 ~~~P~~RPsm~eV~~~  330 (342)
                      +.+|++||++.++++.
T Consensus       238 ~~~p~~R~s~~~ll~~  253 (256)
T cd08221         238 QQDPEKRPTADEVLDQ  253 (256)
T ss_pred             ccCcccCCCHHHHhhC
Confidence            9999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.59  E-value=4.4e-15  Score=136.93  Aligned_cols=158  Identities=16%  Similarity=0.163  Sum_probs=99.7

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc------------------EE-EeeCC---cEEE--E------
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP------------------IV-ECHVG---ALIT--I------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~------------------Lv-~c~~~---~lv~--m------  212 (342)
                      +.||+|++|.||++.....  .+|+|+++.......+.                  ++ ++..+   ++++  +      
T Consensus        25 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~  104 (285)
T cd06648          25 VKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALT  104 (285)
T ss_pred             eEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCHH
Confidence            7999999999999997644  89999886443221111                  22 22222   3333  1      


Q ss_pred             -------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc------cccccccCcce
Q 039505          213 -------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH------MSTTIAGTAGF  265 (342)
Q Consensus       213 -------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~------~~~~~~Gt~~y  265 (342)
                                         ++.||+|||+   .+++||||||+||+++++.  ++.+++....      ......|++.|
T Consensus       105 ~~~~~~~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y  181 (285)
T cd06648         105 DIVTHTRMNEEQIATVCLAVLKALSFLHA---QGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYW  181 (285)
T ss_pred             HHHHhCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccccCCccc
Confidence                               8889999999   9999999999999999883  3333322211      11224577778


Q ss_pred             ee--------------------------cCCCCcccccccccccccc-cccccccCCCCCChHHHHHHHHHHHHcccccC
Q 039505          266 LN--------------------------TKNPVISKSIENGNSHLRD-KSTVDLSFKGEFDIISVGKAVEIAMASVSSKV  318 (342)
Q Consensus       266 ~a--------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P  318 (342)
                      +|                          +|+.|+.......  .+.. .....+.+.  ........+.+++.+||+.+|
T Consensus       182 ~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p  257 (285)
T cd06648         182 MAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQ--AMKRIRDNLPPKLK--NLHKVSPRLRSFLDRMLVRDP  257 (285)
T ss_pred             cCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHH--HHHHHHhcCCCCCc--ccccCCHHHHHHHHHHcccCh
Confidence            77                          6777765432111  0000 001111111  111234568899999999999


Q ss_pred             CCCCCHHHHHH
Q 039505          319 NRRPLMNQVVM  329 (342)
Q Consensus       319 ~~RPsm~eV~~  329 (342)
                      ++||++.++++
T Consensus       258 ~~Rpt~~~il~  268 (285)
T cd06648         258 AQRATAAELLN  268 (285)
T ss_pred             hhCcCHHHHcc
Confidence            99999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.58  E-value=1.1e-14  Score=132.35  Aligned_cols=160  Identities=18%  Similarity=0.238  Sum_probs=99.4

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCC--CCc-------c-----------EE----EeeCC-----c
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQ--GHV-------P-----------IV----ECHVG-----A  208 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~--~~~-------~-----------Lv----~c~~~-----~  208 (342)
                      +|.  +.||+|+||.||+|...++  .||||.+......  ...       +           ++    ++.+.     .
T Consensus         3 ~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   82 (265)
T cd06652           3 NWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLS   82 (265)
T ss_pred             cceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEE
Confidence            455  8999999999999998764  9999988643211  111       1           22    22221     2


Q ss_pred             EEE--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc----
Q 039505          209 LIT--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH----  254 (342)
Q Consensus       209 lv~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~----  254 (342)
                      +++  +                          ++.||+|||+   .+++|+||||+||+++.+  .++.+++....    
T Consensus        83 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~  159 (265)
T cd06652          83 IFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHS---NMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTI  159 (265)
T ss_pred             EEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEecCCCCEEECcCccccccccc
Confidence            222  1                          8899999999   899999999999999987  34444332211    


Q ss_pred             -----cccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHH
Q 039505          255 -----MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISV  303 (342)
Q Consensus       255 -----~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~  303 (342)
                           ......|+..|+|                          +|+.|+.......  .+.. ....+ .....+....
T Consensus       160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~--~~~~-~~~~~-~~~~~~~~~~  235 (265)
T cd06652         160 CLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMA--AIFK-IATQP-TNPVLPPHVS  235 (265)
T ss_pred             cccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHH--HHHH-HhcCC-CCCCCchhhC
Confidence                 1122457777877                          7888775432111  1100 00111 1112233344


Q ss_pred             HHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          304 GKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       304 ~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ..+.+++.+|+. +|++||++.+|++
T Consensus       236 ~~~~~~i~~~l~-~p~~Rp~~~~il~  260 (265)
T cd06652         236 DHCRDFLKRIFV-EAKLRPSADELLR  260 (265)
T ss_pred             HHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence            557778888884 8999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.58  E-value=4.3e-15  Score=135.95  Aligned_cols=162  Identities=17%  Similarity=0.208  Sum_probs=98.3

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-----c---------------EE-EeeC---C--cEEE--E--
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-----P---------------IV-ECHV---G--ALIT--I--  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-----~---------------Lv-~c~~---~--~lv~--m--  212 (342)
                      +.||+|+||.||+|.....  .||+|+++........     +               +. +|..   +  .+++  +  
T Consensus         5 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~~   84 (282)
T cd07831           5 GKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELMDM   84 (282)
T ss_pred             eeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecCCc
Confidence            7899999999999998654  9999998764321110     1               33 3332   2  3333  1  


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-CccccCCCCCc-----cccccccC
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-SRISPVEGGTH-----MSTTIAGT  262 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-a~~~~~~~~~~-----~~~~~~Gt  262 (342)
                                              ++.||+|||+   .+++||||||+||+++.. .++.+++....     ......++
T Consensus        85 ~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~p~ni~l~~~~~kl~dfg~~~~~~~~~~~~~~~~~  161 (282)
T cd07831          85 NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHR---NGIFHRDIKPENILIKDDILKLADFGSCRGIYSKPPYTEYIST  161 (282)
T ss_pred             cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEcCCCeEEEecccccccccCCCcCCCCCC
Confidence                                    8899999999   899999999999999984 33333322111     11123355


Q ss_pred             cceee---------------------------cCCCCcccccccc-cccccc---------------cccccccCCCC--
Q 039505          263 AGFLN---------------------------TKNPVISKSIENG-NSHLRD---------------KSTVDLSFKGE--  297 (342)
Q Consensus       263 ~~y~a---------------------------tG~~P~~~~~~~~-~~~l~~---------------~~~~d~~l~~~--  297 (342)
                      ..|+|                           +|+.|+....... ...+..               ....+......  
T Consensus       162 ~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (282)
T cd07831         162 RWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKG  241 (282)
T ss_pred             cccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCccccc
Confidence            55655                           7777775432110 000000               00000000000  


Q ss_pred             -----CChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          298 -----FDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       298 -----~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                           ........+.+++.+||+.+|++||++.++++
T Consensus       242 ~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~  278 (282)
T cd07831         242 TGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR  278 (282)
T ss_pred             ccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence                 01123567899999999999999999999875

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.58  E-value=1.1e-15  Score=138.13  Aligned_cols=172  Identities=17%  Similarity=0.225  Sum_probs=119.0

Q ss_pred             CHHHHHHHhhccCcccCcCCCeeEEEEEE-CCC-eEEEEEccCCCCCCCcc-------------------EE-EeeCC--
Q 039505          152 ALELSLRVTNNFERVPYKGGFITVYHGQL-VKS-EVAMKMLSPSSSQGHVP-------------------IV-ECHVG--  207 (342)
Q Consensus       152 ~~~~l~~at~~f~~~lG~G~fG~Vykg~~-~~~-~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~--  207 (342)
                      .++++-+.|+   ++||+|+|+.|--+.. ..+ ++|||++.+........                   |+ |..+.  
T Consensus        74 ~F~d~YkLt~---e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~  150 (463)
T KOG0607|consen   74 KFEDMYKLTS---ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTR  150 (463)
T ss_pred             hHHHHHHhHH---HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccce
Confidence            4778887776   8999999999998874 455 99999998875443332                   55 55544  


Q ss_pred             -cEEE--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-----CccccCCCCC
Q 039505          208 -ALIT--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-----SRISPVEGGT  253 (342)
Q Consensus       208 -~lv~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-----a~~~~~~~~~  253 (342)
                       +|||  |                          ||.||.|||.   ++|.|||+||+|||-.+.     .|+.+++.++
T Consensus       151 FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~---kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgS  227 (463)
T KOG0607|consen  151 FYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHT---KGIAHRDLKPENILCESPNKVSPVKICDFDLGS  227 (463)
T ss_pred             EEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhh---cCcccccCCccceeecCCCCcCceeeecccccc
Confidence             8888  6                          9999999999   999999999999998765     5566555432


Q ss_pred             cc-------------ccccccCcceee-------------------------------cCCCCcccccccc-------cc
Q 039505          254 HM-------------STTIAGTAGFLN-------------------------------TKNPVISKSIENG-------NS  282 (342)
Q Consensus       254 ~~-------------~~~~~Gt~~y~a-------------------------------tG~~P~~~~~~~~-------~~  282 (342)
                      ..             -.+.+|+..|||                               +|-+||.+..+..       ..
T Consensus       228 g~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~C  307 (463)
T KOG0607|consen  228 GIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVC  307 (463)
T ss_pred             ccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCcc
Confidence            21             133689999999                               8999998754321       00


Q ss_pred             cccccccccc------cCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          283 HLRDKSTVDL------SFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       283 ~l~~~~~~d~------~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ...+..++..      ..+.........+..+++...+..+|.+|-++.+++.
T Consensus       308 r~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln  360 (463)
T KOG0607|consen  308 RVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN  360 (463)
T ss_pred             HHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence            0001111111      1111112233455677777888899999999988875

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.58  E-value=3.1e-15  Score=135.94  Aligned_cols=164  Identities=21%  Similarity=0.276  Sum_probs=102.4

Q ss_pred             HhhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc---c---------------EE-EeeC------C--
Q 039505          159 VTNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV---P---------------IV-ECHV------G--  207 (342)
Q Consensus       159 at~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~---~---------------Lv-~c~~------~--  207 (342)
                      ++++|.  +.||+|+||.||+|.....  .+++|++.........   +               ++ +|..      +  
T Consensus         4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~   83 (275)
T cd06608           4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQ   83 (275)
T ss_pred             chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceE
Confidence            566777  8999999999999998654  8999998754321100   0               22 3321      1  


Q ss_pred             -cEEE--E------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCC
Q 039505          208 -ALIT--I------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGG  252 (342)
Q Consensus       208 -~lv~--m------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~  252 (342)
                       ++++  +                              +++||.|||+   .+++||||+|+||+++++.  ++.+++..
T Consensus        84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~~l~p~ni~~~~~~~~~l~d~~~~  160 (275)
T cd06608          84 LWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHE---NKVIHRDIKGQNILLTKNAEVKLVDFGVS  160 (275)
T ss_pred             EEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEEccCCeEEECCCccc
Confidence             2222  1                              8899999999   9999999999999999883  33333221


Q ss_pred             Cc------cccccccCcceee-------------------------------cCCCCcccccccccccccc-cccccccC
Q 039505          253 TH------MSTTIAGTAGFLN-------------------------------TKNPVISKSIENGNSHLRD-KSTVDLSF  294 (342)
Q Consensus       253 ~~------~~~~~~Gt~~y~a-------------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~l  294 (342)
                      ..      ......|+..|+|                               ||+.|+.......  .+.+ .....+.+
T Consensus       161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~  238 (275)
T cd06608         161 AQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMR--ALFKIPRNPPPTL  238 (275)
T ss_pred             eecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHH--HHHHhhccCCCCC
Confidence            11      1122446666665                               6777765332111  0000 00001111


Q ss_pred             CCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          295 KGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       295 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                        ..+......+.+++.+||..+|++|||+.++++
T Consensus       239 --~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         239 --KSPENWSKKFNDFISECLIKNYEQRPFMEELLE  271 (275)
T ss_pred             --CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence              111223456889999999999999999999975

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.58  E-value=4.7e-15  Score=137.29  Aligned_cols=82  Identities=29%  Similarity=0.422  Sum_probs=60.3

Q ss_pred             HhhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc------c-----------EE----EeeCC------
Q 039505          159 VTNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV------P-----------IV----ECHVG------  207 (342)
Q Consensus       159 at~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~------~-----------Lv----~c~~~------  207 (342)
                      +.++|+  +.||+|+||.||+|.+..+  .||||+++........      +           ++    ++...      
T Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~   84 (302)
T cd07864           5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF   84 (302)
T ss_pred             hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence            445666  8999999999999999754  9999999754322111      1           22    22210      


Q ss_pred             -------cEEE--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC
Q 039505          208 -------ALIT--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK  243 (342)
Q Consensus       208 -------~lv~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~  243 (342)
                             ++++  +                          ++.||+|||+   .+|+||||||+||+++++
T Consensus        85 ~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~  152 (302)
T cd07864          85 KKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHK---KNFLHRDIKCSNILLNNK  152 (302)
T ss_pred             cccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCC
Confidence                   2333  1                          8899999999   899999999999999988

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.58  E-value=2.8e-15  Score=141.43  Aligned_cols=166  Identities=16%  Similarity=0.184  Sum_probs=100.7

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC--c----c-----------EE----Eee----CC---c
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH--V----P-----------IV----ECH----VG---A  208 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~--~----~-----------Lv----~c~----~~---~  208 (342)
                      ++|+  +.||+|+||.||+|....+  .||+|++........  .    +           ++    ++.    .+   +
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   84 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY   84 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence            5666  8999999999999998754  999999876432111  0    1           11    111    11   2


Q ss_pred             EEE--E-------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCcc----
Q 039505          209 LIT--I-------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHM----  255 (342)
Q Consensus       209 lv~--m-------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~~----  255 (342)
                      +++  +                         +++||+|||+   .+|+||||||+||+++++.  ++.+++.....    
T Consensus        85 lv~e~~~~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~  161 (334)
T cd07855          85 VVMDLMESDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHS---ANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSP  161 (334)
T ss_pred             EEEehhhhhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEecccccceeecccC
Confidence            333  1                         8999999999   8999999999999999983  34333322110    


Q ss_pred             ------ccccccCcceee---------------------------cCCCCccccccccccc------------ccc----
Q 039505          256 ------STTIAGTAGFLN---------------------------TKNPVISKSIENGNSH------------LRD----  286 (342)
Q Consensus       256 ------~~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~~~~------------l~~----  286 (342)
                            .....|+..|+|                           +|+.||..........            +..    
T Consensus       162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  241 (334)
T cd07855         162 TEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGS  241 (334)
T ss_pred             cCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhch
Confidence                  012356666665                           6777775432110000            000    


Q ss_pred             ---cccccc-cCCCCC-----ChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          287 ---KSTVDL-SFKGEF-----DIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       287 ---~~~~d~-~l~~~~-----~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                         .+..+. ......     .......+.+++..||+.+|++||++.+++.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  293 (334)
T cd07855         242 DRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ  293 (334)
T ss_pred             hhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence               000000 000001     1123456889999999999999999999885

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.57  E-value=2.5e-15  Score=142.06  Aligned_cols=172  Identities=14%  Similarity=0.173  Sum_probs=103.7

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCC--Cc----c-----------EE----EeeCC--------
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQG--HV----P-----------IV----ECHVG--------  207 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~--~~----~-----------Lv----~c~~~--------  207 (342)
                      +.|.  +.||+|+||+||+|....+  .||||.+.......  ..    +           ++    ++...        
T Consensus         5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~   84 (337)
T cd07858           5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDV   84 (337)
T ss_pred             cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcE
Confidence            3455  8899999999999998654  99999986532111  10    1           22    22110        


Q ss_pred             cEEE--E-------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc---
Q 039505          208 ALIT--I-------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM---  255 (342)
Q Consensus       208 ~lv~--m-------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~---  255 (342)
                      ++++  +                         ++.||.|||+   .+++||||||+||+++.+  .++.+++.....   
T Consensus        85 ~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~  161 (337)
T cd07858          85 YIVYELMDTDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHS---ANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEK  161 (337)
T ss_pred             EEEEeCCCCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECcCccccccCCC
Confidence            2333  1                         8899999999   899999999999999987  344443322111   


Q ss_pred             ---ccccccCcceee---------------------------cCCCCcccccccc-cccc--------------cc----
Q 039505          256 ---STTIAGTAGFLN---------------------------TKNPVISKSIENG-NSHL--------------RD----  286 (342)
Q Consensus       256 ---~~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~-~~~l--------------~~----  286 (342)
                         .....++..|+|                           +|+.|+....... ...+              +.    
T Consensus       162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (337)
T cd07858         162 GDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKA  241 (337)
T ss_pred             cccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhh
Confidence               112345566665                           7888875432100 0000              00    


Q ss_pred             cccc-------cccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHH--HHhccC
Q 039505          287 KSTV-------DLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMV--REQGNG  336 (342)
Q Consensus       287 ~~~~-------d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~--L~~i~~  336 (342)
                      ...+       ++... ........++.+++.+||+.+|++|||+.++++.  ++.++.
T Consensus       242 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~  299 (337)
T cd07858         242 RRYIRSLPYTPRQSFA-RLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHD  299 (337)
T ss_pred             hHHHHhcCcccccCHH-HHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcC
Confidence            0000       00000 0011234568899999999999999999999865  655543

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.57  E-value=1.2e-15  Score=139.86  Aligned_cols=162  Identities=16%  Similarity=0.172  Sum_probs=101.5

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCC--Cc----c--------------EE--Eee---CC----cEEE--
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQG--HV----P--------------IV--ECH---VG----ALIT--  211 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~--~~----~--------------Lv--~c~---~~----~lv~--  211 (342)
                      +.||+|+||.|.++....+  .||||++.......  .+    +              +.  +-.   +.    ++|+  
T Consensus        28 ~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~el  107 (359)
T KOG0660|consen   28 EPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFEL  107 (359)
T ss_pred             ccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehhH
Confidence            7799999999999998765  99999987332111  11    1              11  111   11    5555  


Q ss_pred             E-------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc--------c
Q 039505          212 I-------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM--------S  256 (342)
Q Consensus       212 m-------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~--------~  256 (342)
                      |                         +.+||.|+|+   -+|+||||||+|+|++.+  -|+.+++.....        .
T Consensus       108 MetDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHS---AnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~m  184 (359)
T KOG0660|consen  108 METDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHS---ANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFEDGFM  184 (359)
T ss_pred             HhhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhc---ccccccccchhheeeccCCCEEeccccceeeccccCcccch
Confidence            4                         8999999999   999999999999999999  444444433222        1


Q ss_pred             cccccCcceee---------------------------cCCCCcccccccc-cccccc------------------cccc
Q 039505          257 TTIAGTAGFLN---------------------------TKNPVISKSIENG-NSHLRD------------------KSTV  290 (342)
Q Consensus       257 ~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~-~~~l~~------------------~~~~  290 (342)
                      +..+.|.+|.|                           +|++-|.+...-. ...+.+                  ...+
T Consensus       185 TeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi  264 (359)
T KOG0660|consen  185 TEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYI  264 (359)
T ss_pred             hcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHH
Confidence            34667888888                           6666665443111 000000                  0000


Q ss_pred             c--ccCCC-CC---ChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          291 D--LSFKG-EF---DIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       291 d--~~l~~-~~---~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      .  |..+. ++   -.......+++..+++..||.+|+|++|.++
T Consensus       265 ~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~  309 (359)
T KOG0660|consen  265 KSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA  309 (359)
T ss_pred             HhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence            0  00000 00   0122334788888999999999999999875

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.57  E-value=1.7e-15  Score=150.77  Aligned_cols=164  Identities=15%  Similarity=0.213  Sum_probs=112.0

Q ss_pred             cccCcCCCeeEEEEEE-CCC-----eEEEEEccCCCCCC-Ccc------------------EE-EeeCC--cEEE--E--
Q 039505          165 RVPYKGGFITVYHGQL-VKS-----EVAMKMLSPSSSQG-HVP------------------IV-ECHVG--ALIT--I--  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~-~~~-----~vAVK~l~~~~~~~-~~~------------------Lv-~c~~~--~lv~--m--  212 (342)
                      .+||+|+||+||||.| +.+     +||+|++....... ..+                  |+ .|...  .||.  |  
T Consensus       702 kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~~qlvtq~mP~  781 (1177)
T KOG1025|consen  702 KVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLSTLQLVTQLMPL  781 (1177)
T ss_pred             ceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccchHHHHHHhccc
Confidence            6899999999999987 333     89999997765432 222                  55 66655  2222  2  


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC----------CccccCCCCCcccc
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK----------SRISPVEGGTHMST  257 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~----------a~~~~~~~~~~~~~  257 (342)
                                               ||+||.|||.   +.++||||-..|||+.+-          +++...+.......
T Consensus       782 G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~---qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~~  858 (1177)
T KOG1025|consen  782 GCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEE---QRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAP  858 (1177)
T ss_pred             chHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHh---cchhhhhhhhhheeecCCCeEEEEecchhhccCccccccccc
Confidence                                     9999999998   999999999999999976          33332222211122


Q ss_pred             ccccCcceee---------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHH
Q 039505          258 TIAGTAGFLN---------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIA  310 (342)
Q Consensus       258 ~~~Gt~~y~a---------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~  310 (342)
                      ...-.+-|||                           .|..|++...-..+.+     .+....+-+.++-+...+..++
T Consensus       859 ~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~d-----lle~geRLsqPpiCtiDVy~~m  933 (1177)
T KOG1025|consen  859 GGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPD-----LLEKGERLSQPPICTIDVYMVM  933 (1177)
T ss_pred             ccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhH-----HHhccccCCCCCCccHHHHHHH
Confidence            2233455666                           5778877665333212     2222222334566777899999


Q ss_pred             HHcccccCCCCCCHHHHHHHHHhccC
Q 039505          311 MASVSSKVNRRPLMNQVVMVREQGNG  336 (342)
Q Consensus       311 ~~Cl~~~P~~RPsm~eV~~~L~~i~~  336 (342)
                      .+||..|+..||+++++.....+..+
T Consensus       934 vkCwmid~~~rp~fkel~~~fs~~ar  959 (1177)
T KOG1025|consen  934 VKCWMIDADSRPTFKELAEEFSRMAR  959 (1177)
T ss_pred             HHHhccCcccCccHHHHHHHHHHHhc
Confidence            99999999999999999988776544

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.57  E-value=2.2e-15  Score=136.29  Aligned_cols=158  Identities=23%  Similarity=0.270  Sum_probs=98.3

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc------------------EE----EeeCC---cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP------------------IV----ECHVG---ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~------------------Lv----~c~~~---~lv~--m---  212 (342)
                      +.||.|+||.||+|....+  .||+|.+..........                  ++    ++.++   ++++  +   
T Consensus         6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   85 (258)
T cd05578           6 RVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLGG   85 (258)
T ss_pred             EEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCCCCC
Confidence            7899999999999998754  99999997543221110                  11    12222   2222  1   


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc-----cccccccC
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH-----MSTTIAGT  262 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~-----~~~~~~Gt  262 (342)
                                             +++||.|||+   .+++|+||||+||+++++.  ++.+++....     ......|+
T Consensus        86 ~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~  162 (258)
T cd05578          86 DLRYHLSQKVKFSEEQVKFWICEIVLALEYLHS---KGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTSGT  162 (258)
T ss_pred             CHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEEcCCCCEEEeecccccccCCCccccccCCC
Confidence                                   8999999999   8999999999999999883  3333222111     11224455


Q ss_pred             cceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccc
Q 039505          263 AGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSS  316 (342)
Q Consensus       263 ~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~  316 (342)
                      ..|+|                          ||+.|+..........+... ...  .....+......+.+++.+||+.
T Consensus       163 ~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~i~~~l~~  239 (258)
T cd05578         163 PGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAK-QET--ADVLYPATWSTEAIDAINKLLER  239 (258)
T ss_pred             hhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHH-hcc--ccccCcccCcHHHHHHHHHHccC
Confidence            55655                          88888876542110011110 000  11112223346688999999999


Q ss_pred             cCCCCCCH--HHHH
Q 039505          317 KVNRRPLM--NQVV  328 (342)
Q Consensus       317 ~P~~RPsm--~eV~  328 (342)
                      +|.+||++  .|+.
T Consensus       240 ~p~~R~~~~~~~l~  253 (258)
T cd05578         240 DPQKRLGDNLKDLK  253 (258)
T ss_pred             ChhHcCCccHHHHh
Confidence            99999999  5543

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.57  E-value=8.8e-15  Score=132.32  Aligned_cols=165  Identities=18%  Similarity=0.212  Sum_probs=104.6

Q ss_pred             ccC--cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCCCcc-------------------EE-EeeCC---cEEE--E
Q 039505          162 NFE--RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQGHVP-------------------IV-ECHVG---ALIT--I  212 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~---~lv~--m  212 (342)
                      +|+  +.||+|++|.||+|+... + .||||++..........                   +. ++..+   ++++  +
T Consensus         2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   81 (264)
T cd06623           2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYM   81 (264)
T ss_pred             cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEec
Confidence            455  899999999999999886 4 99999987664321111                   22 33332   3333  1


Q ss_pred             --------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc------cccc
Q 039505          213 --------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH------MSTT  258 (342)
Q Consensus       213 --------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~------~~~~  258 (342)
                                                +++||+|||+.  .+++||||+|+||+++.+.  ++.+++....      ....
T Consensus        82 ~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~--~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~  159 (264)
T cd06623          82 DGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTK--RHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNT  159 (264)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhcc--CCCccCCCCHHHEEECCCCCEEEccCccceecccCCCcccc
Confidence                                      88999999974  7899999999999999883  3333322211      1112


Q ss_pred             cccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChH-HHHHHHHHHH
Q 039505          259 IAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDII-SVGKAVEIAM  311 (342)
Q Consensus       259 ~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~-~~~~l~~l~~  311 (342)
                      ..++..|+|                          ||+.|+..........+.. .+..... ...+.. ....+.+++.
T Consensus       160 ~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~l~~li~  237 (264)
T cd06623         160 FVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQ-AICDGPP-PSLPAEEFSPEFRDFIS  237 (264)
T ss_pred             eeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHH-HHhcCCC-CCCCcccCCHHHHHHHH
Confidence            346666665                          7888876553111001111 1111111 111222 4566889999


Q ss_pred             HcccccCCCCCCHHHHHHH
Q 039505          312 ASVSSKVNRRPLMNQVVMV  330 (342)
Q Consensus       312 ~Cl~~~P~~RPsm~eV~~~  330 (342)
                      .||+.+|++||++.++++.
T Consensus       238 ~~l~~~p~~R~~~~~ll~~  256 (264)
T cd06623         238 ACLQKDPKKRPSAAELLQH  256 (264)
T ss_pred             HHccCChhhCCCHHHHHhC
Confidence            9999999999999999863

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.57  E-value=8.5e-15  Score=135.84  Aligned_cols=79  Identities=28%  Similarity=0.455  Sum_probs=58.1

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC------cc--------------EE-EeeCC---------
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH------VP--------------IV-ECHVG---------  207 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~------~~--------------Lv-~c~~~---------  207 (342)
                      +|.  +.||+|+||.||+|.....  .||||.+........      .+              ++ +|...         
T Consensus        13 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   92 (310)
T cd07865          13 KYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKG   92 (310)
T ss_pred             heEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCc
Confidence            455  7899999999999998754  999998864422111      11              22 33221         


Q ss_pred             --cEEE--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC
Q 039505          208 --ALIT--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK  243 (342)
Q Consensus       208 --~lv~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~  243 (342)
                        ++++  +                          +++||+|||+   .+++|+||||+||+++.+
T Consensus        93 ~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~  155 (310)
T cd07865          93 SFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHR---NKILHRDMKAANILITKD  155 (310)
T ss_pred             eEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEECCC
Confidence              2332  1                          8999999999   899999999999999988

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.57  E-value=2.2e-14  Score=133.53  Aligned_cols=75  Identities=24%  Similarity=0.310  Sum_probs=55.8

Q ss_pred             cccCcCCCeeEEEEEECC--C--eEEEEEccCCC---CCCCc----c--------------EE-EeeCC-----cEEE--
Q 039505          165 RVPYKGGFITVYHGQLVK--S--EVAMKMLSPSS---SQGHV----P--------------IV-ECHVG-----ALIT--  211 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~--~--~vAVK~l~~~~---~~~~~----~--------------Lv-~c~~~-----~lv~--  211 (342)
                      +.||+|+||.||+|....  .  .||+|.+....   .....    +              +. +|...     ++|+  
T Consensus         6 ~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~   85 (316)
T cd07842           6 GCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLLFDY   85 (316)
T ss_pred             EEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEEEeC
Confidence            789999999999999865  3  99999998732   11100    1              33 33222     3332  


Q ss_pred             E------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecC
Q 039505          212 I------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNE  242 (342)
Q Consensus       212 m------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~  242 (342)
                      +                              ++.||+|||+   .+|+||||||+|||++.
T Consensus        86 ~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~h~dlkp~Nil~~~  143 (316)
T cd07842          86 AEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHS---NWVLHRDLKPANILVMG  143 (316)
T ss_pred             CCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEEcC
Confidence            1                              8899999999   99999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.57  E-value=5.5e-15  Score=139.34  Aligned_cols=173  Identities=17%  Similarity=0.166  Sum_probs=103.9

Q ss_pred             HHHHHhhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC--c----c--------------EE-EeeC-C-
Q 039505          155 LSLRVTNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH--V----P--------------IV-ECHV-G-  207 (342)
Q Consensus       155 ~l~~at~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~--~----~--------------Lv-~c~~-~-  207 (342)
                      ++..++++|.  +.||+|+||.||++.....  .||||++........  +    +              +. ++.. + 
T Consensus         4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~   83 (328)
T cd07856           4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE   83 (328)
T ss_pred             ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence            3445678887  8999999999999987644  999998764321111  1    1              22 3322 2 


Q ss_pred             --cEEE--E------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc--
Q 039505          208 --ALIT--I------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM--  255 (342)
Q Consensus       208 --~lv~--m------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~--  255 (342)
                        ++++  +                        +++||.|||+   .+|+||||||+|||++++  .++.+++.....  
T Consensus        84 ~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~---~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~  160 (328)
T cd07856          84 DIYFVTELLGTDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHS---AGVVHRDLKPSNILINENCDLKICDFGLARIQDP  160 (328)
T ss_pred             cEEEEeehhccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEeECCCCCEEeCccccccccCC
Confidence              3333  2                        7899999999   999999999999999987  333333222111  


Q ss_pred             -ccccccCcceee---------------------------cCCCCcccccccc-c-----------ccccc-------cc
Q 039505          256 -STTIAGTAGFLN---------------------------TKNPVISKSIENG-N-----------SHLRD-------KS  288 (342)
Q Consensus       256 -~~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~-~-----------~~l~~-------~~  288 (342)
                       .....++..|+|                           ||+.|+....... .           ..+..       .+
T Consensus       161 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (328)
T cd07856         161 QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLR  240 (328)
T ss_pred             CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHH
Confidence             111234445544                           7887775432100 0           00000       00


Q ss_pred             ccc-ccCCCCCC-----hHHHHHHHHHHHHcccccCCCCCCHHHHHHH
Q 039505          289 TVD-LSFKGEFD-----IISVGKAVEIAMASVSSKVNRRPLMNQVVMV  330 (342)
Q Consensus       289 ~~d-~~l~~~~~-----~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~  330 (342)
                      ... .......+     ......+.+++.+|++.+|++||++.+++..
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~  288 (328)
T cd07856         241 FVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH  288 (328)
T ss_pred             HHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            000 00000011     1123568899999999999999999999754

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.57  E-value=9.9e-16  Score=149.57  Aligned_cols=157  Identities=15%  Similarity=0.149  Sum_probs=106.8

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCC-------Ccc--------------EE--------------EeeCC
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQG-------HVP--------------IV--------------ECHVG  207 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~-------~~~--------------Lv--------------~c~~~  207 (342)
                      +-||+|+-|.|-.|++..+  .+|||++.+.....       ..|              |+              |..+|
T Consensus        18 kTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv~gG   97 (786)
T KOG0588|consen   18 KTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYVPGG   97 (786)
T ss_pred             ccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEecCCc
Confidence            7899999999999998765  99999998763211       111              22              22222


Q ss_pred             -cEEEE-----------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-----cccccccC
Q 039505          208 -ALITI-----------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-----MSTTIAGT  262 (342)
Q Consensus       208 -~lv~m-----------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-----~~~~~~Gt  262 (342)
                       ++.||                 |..|+.|+|.   .+|+|||+||+|+|||.+  -|+.+++.++-     .-.+-||+
T Consensus        98 ELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~---~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLeTSCGS  174 (786)
T KOG0588|consen   98 ELFDYLVRKGPLPEREAAHFFRQILDGVSYCHA---FNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLETSCGS  174 (786)
T ss_pred             hhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhh---hcceeccCCchhhhhhcccCEeeeccceeecccCCccccccCCC
Confidence             11111                 8999999999   999999999999999988  34444443321     22447999


Q ss_pred             cceee---------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHccc
Q 039505          263 AGFLN---------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVS  315 (342)
Q Consensus       263 ~~y~a---------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~  315 (342)
                      +.|.+                           ||+.||+++.-.....-++...++      .+.....++.+|+.+++.
T Consensus       175 PHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~------MPs~Is~eaQdLLr~ml~  248 (786)
T KOG0588|consen  175 PHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFE------MPSNISSEAQDLLRRMLD  248 (786)
T ss_pred             cccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCccc------CCCcCCHHHHHHHHHHhc
Confidence            99998                           999999954321100000011111      223344557888999999


Q ss_pred             ccCCCCCCHHHHHHH
Q 039505          316 SKVNRRPLMNQVVMV  330 (342)
Q Consensus       316 ~~P~~RPsm~eV~~~  330 (342)
                      .||+.|.|++||.+.
T Consensus       249 VDp~~RiT~~eI~kH  263 (786)
T KOG0588|consen  249 VDPSTRITTEEILKH  263 (786)
T ss_pred             cCccccccHHHHhhC
Confidence            999999999999864

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.57  E-value=2.4e-15  Score=139.89  Aligned_cols=157  Identities=23%  Similarity=0.205  Sum_probs=108.2

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc----------------------------------EE-EeeCC
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP----------------------------------IV-ECHVG  207 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~----------------------------------Lv-~c~~~  207 (342)
                      +.||.|.-|+||.+++.+.  .+|+|++.+......++                                  ++ ||.++
T Consensus        83 k~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpGG  162 (459)
T KOG0610|consen   83 KRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCPGG  162 (459)
T ss_pred             HHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecCCCc
Confidence            8899999999999999887  99999998765433322                                  33 77776


Q ss_pred             -cEEE-------E------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCccccCCC----------------
Q 039505          208 -ALIT-------I------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEG----------------  251 (342)
Q Consensus       208 -~lv~-------m------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~~~~~~~----------------  251 (342)
                       +-+.       +            |.-||+|||-   .|||.|||||+||||-+++.++..++                
T Consensus       163 dL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHm---lGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~  239 (459)
T KOG0610|consen  163 DLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHM---LGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSS  239 (459)
T ss_pred             cHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHh---hceeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccC
Confidence             1110       0            7779999999   99999999999999999811110000                


Q ss_pred             ---------------------------C---------------------CccccccccCcceee----------------
Q 039505          252 ---------------------------G---------------------THMSTTIAGTAGFLN----------------  267 (342)
Q Consensus       252 ---------------------------~---------------------~~~~~~~~Gt~~y~a----------------  267 (342)
                                                 .                     ...+..++||-.|+|                
T Consensus       240 ~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWW  319 (459)
T KOG0610|consen  240 SPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWW  319 (459)
T ss_pred             CCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchhhHH
Confidence                                       0                     011233689999998                


Q ss_pred             ----------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCC----HHHHH
Q 039505          268 ----------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPL----MNQVV  328 (342)
Q Consensus       268 ----------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs----m~eV~  328 (342)
                                .|+.||.+.....  .+.  .++-..+.-....+.+..+.+|+...+.+||++|-.    +.||-
T Consensus       320 tfGIflYEmLyG~TPFKG~~~~~--Tl~--NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK  390 (459)
T KOG0610|consen  320 TFGIFLYEMLYGTTPFKGSNNKE--TLR--NIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIK  390 (459)
T ss_pred             HHHHHHHHHHhCCCCcCCCCchh--hHH--HHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhh
Confidence                      8999998876544  222  222222222222245567889999999999999987    66654

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.57  E-value=7e-16  Score=143.08  Aligned_cols=154  Identities=16%  Similarity=0.170  Sum_probs=106.1

Q ss_pred             cccCcCCCeeEEEEEE-CCC-eEEEEEccCCCCCCCcc------------------EE-----------------EeeCC
Q 039505          165 RVPYKGGFITVYHGQL-VKS-EVAMKMLSPSSSQGHVP------------------IV-----------------ECHVG  207 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~-~~~-~vAVK~l~~~~~~~~~~------------------Lv-----------------~c~~~  207 (342)
                      +.||+|.||.|-++.. ..+ .||||.++++...+.+.                  ++                 |...+
T Consensus        59 etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEYaS~G  138 (668)
T KOG0611|consen   59 ETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEYASGG  138 (668)
T ss_pred             HHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEecCCc
Confidence            7899999999999986 455 99999998876554433                  22                 22222


Q ss_pred             -cEEEE-----------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-----cccccccC
Q 039505          208 -ALITI-----------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-----MSTTIAGT  262 (342)
Q Consensus       208 -~lv~m-----------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-----~~~~~~Gt  262 (342)
                       +..|+                 |..|+.|+|.   .+++|||||.+|||||+|  .++.+++....     .-.++||+
T Consensus       139 eLYDYiSer~~LsErEaRhfFRQIvSAVhYCHk---nrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfLqTFCGS  215 (668)
T KOG0611|consen  139 ELYDYISERGSLSEREARHFFRQIVSAVHYCHK---NRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFLQTFCGS  215 (668)
T ss_pred             cHHHHHHHhccccHHHHHHHHHHHHHHHHHHhh---ccceecccchhheeecCCCCeeeeccchhhhhccccHHHHhcCC
Confidence             22220                 8999999999   999999999999999998  56655544322     22457899


Q ss_pred             cceee---------------------------cCCCCcccccccc-cccccccccccccCCCCCChHHHHHHHHHHHHcc
Q 039505          263 AGFLN---------------------------TKNPVISKSIENG-NSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASV  314 (342)
Q Consensus       263 ~~y~a---------------------------tG~~P~~~~~~~~-~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl  314 (342)
                      +-|..                           .|..||++..... .+++-......|        +.+.....|+.+++
T Consensus       216 PLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP--------~~PSdA~gLIRwmL  287 (668)
T KOG0611|consen  216 PLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREP--------ETPSDASGLIRWML  287 (668)
T ss_pred             cccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCC--------CCCchHHHHHHHHH
Confidence            98887                           6778877654322 101111122222        22233667888999


Q ss_pred             cccCCCCCCHHHHHH
Q 039505          315 SSKVNRRPLMNQVVM  329 (342)
Q Consensus       315 ~~~P~~RPsm~eV~~  329 (342)
                      ..+|++|-|+.+|..
T Consensus       288 mVNP~RRATieDiAs  302 (668)
T KOG0611|consen  288 MVNPERRATIEDIAS  302 (668)
T ss_pred             hcCcccchhHHHHhh
Confidence            999999999999875

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.57  E-value=6.4e-16  Score=150.15  Aligned_cols=110  Identities=22%  Similarity=0.322  Sum_probs=75.5

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC---CccccCCCCC----ccccccccCcceee------------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK---SRISPVEGGT----HMSTTIAGTAGFLN------------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~---a~~~~~~~~~----~~~~~~~Gt~~y~a------------------  267 (342)
                      |++||.|||+. .+||||||||..||+|+.+   .|+.+.+..+    .....+.|||.|||                  
T Consensus       152 ILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~aksvIGTPEFMAPEmYEE~YnE~VDVYaFG  230 (632)
T KOG0584|consen  152 ILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAKSVIGTPEFMAPEMYEENYNELVDVYAFG  230 (632)
T ss_pred             HHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhccccceeccCccccChHHHhhhcchhhhhhhhh
Confidence            99999999994 5799999999999999999   3443332221    12233789999999                  


Q ss_pred             -------cCCCCcccccccccccccc--cccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          268 -------TKNPVISKSIENGNSHLRD--KSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       268 -------tG~~P~~~~~~~~~~~l~~--~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                             |+..|+.......  .+..  ..-+.|.-.....   -.++.+++.+|+.. .++|||+.|++.
T Consensus       231 MCmLEMvT~eYPYsEC~n~A--QIYKKV~SGiKP~sl~kV~---dPevr~fIekCl~~-~~~R~sa~eLL~  295 (632)
T KOG0584|consen  231 MCMLEMVTSEYPYSECTNPA--QIYKKVTSGIKPAALSKVK---DPEVREFIEKCLAT-KSERLSAKELLK  295 (632)
T ss_pred             HHHHHHHhccCChhhhCCHH--HHHHHHHcCCCHHHhhccC---CHHHHHHHHHHhcC-chhccCHHHHhh
Confidence                   9999998765443  3322  1111111111111   12367888899999 999999999874

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.57  E-value=5.1e-15  Score=135.66  Aligned_cols=162  Identities=19%  Similarity=0.219  Sum_probs=95.8

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-----c---------------------------EE--EeeCCc
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-----P---------------------------IV--ECHVGA  208 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-----~---------------------------Lv--~c~~~~  208 (342)
                      +.||+|++|+||+|...+.  .||||++.........     +                           ++  +|....
T Consensus         5 ~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~l   84 (283)
T cd07830           5 KQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYMEGNL   84 (283)
T ss_pred             eeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecCCCCH
Confidence            7899999999999999754  8999998654321100     0                           22  331110


Q ss_pred             E---------EE-------E---ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCccc-----cccccC
Q 039505          209 L---------IT-------I---PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHMS-----TTIAGT  262 (342)
Q Consensus       209 l---------v~-------m---ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~~-----~~~~Gt  262 (342)
                      .         .+       +   +++||.|||+   .+++|+||||+||+++++  .++.+++......     ....|+
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~  161 (283)
T cd07830          85 YQLMKDRKGKPFSESVIRSIIYQILQGLAHIHK---HGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDYVST  161 (283)
T ss_pred             HHHHHhcccccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCCCCc
Confidence            0         00       0   8999999999   899999999999999987  3444332221111     123355


Q ss_pred             cceee---------------------------cCCCCcccccccc-c-----------cc-ccc----cccccccCC---
Q 039505          263 AGFLN---------------------------TKNPVISKSIENG-N-----------SH-LRD----KSTVDLSFK---  295 (342)
Q Consensus       263 ~~y~a---------------------------tG~~P~~~~~~~~-~-----------~~-l~~----~~~~d~~l~---  295 (342)
                      ..|+|                           ||+.|+....... .           .. +..    ....+..+.   
T Consensus       162 ~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (283)
T cd07830         162 RWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFA  241 (283)
T ss_pred             ccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccc
Confidence            55555                           7777764332110 0           00 000    000000000   


Q ss_pred             ----CCCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          296 ----GEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       296 ----~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                          ..........+.+++.+||+.+|++|||+.|++.
T Consensus       242 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  279 (283)
T cd07830         242 PTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ  279 (283)
T ss_pred             cccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence                0000011356889999999999999999999875

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.57  E-value=6.5e-15  Score=135.95  Aligned_cols=155  Identities=20%  Similarity=0.229  Sum_probs=97.6

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-------c--------------EE-EeeCC---cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-------P--------------IV-ECHVG---ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-------~--------------Lv-~c~~~---~lv~--m---  212 (342)
                      +.||+|+||.||++.+...  .||+|.+........+       +              ++ ++..+   ++++  +   
T Consensus         7 ~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~   86 (290)
T cd05580           7 KTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVPGG   86 (290)
T ss_pred             EEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEecCCCC
Confidence            7899999999999998754  9999998643211100       0              22 22222   2222  1   


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc---cccccccCcc
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH---MSTTIAGTAG  264 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~---~~~~~~Gt~~  264 (342)
                                             +++||.|||+   .+++||||||+|||++++  .++.+++....   ......|++.
T Consensus        87 ~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~  163 (290)
T cd05580          87 ELFSHLRKSGRFPEPVARFYAAQVVLALEYLHS---LDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTLCGTPE  163 (290)
T ss_pred             CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCCCCCcc
Confidence                                   8899999999   999999999999999988  34444332211   1123457777


Q ss_pred             eee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccC
Q 039505          265 FLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKV  318 (342)
Q Consensus       265 y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P  318 (342)
                      |+|                          ||+.|+.......   .. ..+.....  ..+......+.+++.+||+.+|
T Consensus       164 y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~-~~~~~~~~--~~~~~~~~~l~~li~~~l~~~p  237 (290)
T cd05580         164 YLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQ---IY-EKILEGKV--RFPSFFSPDAKDLIRNLLQVDL  237 (290)
T ss_pred             ccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH---HH-HHHhcCCc--cCCccCCHHHHHHHHHHccCCH
Confidence            777                          7888876443211   00 11111111  1112223557889999999999


Q ss_pred             CCCC-----CHHHHH
Q 039505          319 NRRP-----LMNQVV  328 (342)
Q Consensus       319 ~~RP-----sm~eV~  328 (342)
                      .+||     +++|++
T Consensus       238 ~~R~~~~~~~~~~l~  252 (290)
T cd05580         238 TKRLGNLKNGVNDIK  252 (290)
T ss_pred             HHccCcccCCHHHHH
Confidence            9999     666654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.57  E-value=1.2e-15  Score=138.02  Aligned_cols=153  Identities=23%  Similarity=0.254  Sum_probs=103.5

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc---------------------------------EE-
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP---------------------------------IV-  202 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~---------------------------------Lv-  202 (342)
                      ++|.  ++||+|.||.|-.++-+.+  .+|+|++++...-...+                                 ++ 
T Consensus       168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVM  247 (516)
T KOG0690|consen  168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVM  247 (516)
T ss_pred             chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEE
Confidence            5566  9999999999999998766  99999998875433333                                 11 


Q ss_pred             -EeeCCcEEE-E-----------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCccccCCCC--------Ccc
Q 039505          203 -ECHVGALIT-I-----------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGG--------THM  255 (342)
Q Consensus       203 -~c~~~~lv~-m-----------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~~~~~~~~--------~~~  255 (342)
                       |..++-|.| +                 |..||.|||+   .+||.||||.+|.|||.|+.+...+++        ...
T Consensus       248 eyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs---~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t  324 (516)
T KOG0690|consen  248 EYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHS---RNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDT  324 (516)
T ss_pred             EEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhh---CCeeeeechhhhheeccCCceEeeecccchhcccccce
Confidence             333332222 1                 8999999999   999999999999999999554443333        234


Q ss_pred             ccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHH
Q 039505          256 STTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEI  309 (342)
Q Consensus       256 ~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l  309 (342)
                      ..++||||.|+|                          +|+.||.....+..-.++-  +-|-..+.    ....+...|
T Consensus       325 ~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl--~ed~kFPr----~ls~eAktL  398 (516)
T KOG0690|consen  325 TKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELIL--MEDLKFPR----TLSPEAKTL  398 (516)
T ss_pred             eccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHH--hhhccCCc----cCCHHHHHH
Confidence            456899999999                          8999987654332111111  11111211    222235556


Q ss_pred             HHHcccccCCCCC
Q 039505          310 AMASVSSKVNRRP  322 (342)
Q Consensus       310 ~~~Cl~~~P~~RP  322 (342)
                      ..-.+.++|.+|.
T Consensus       399 LsGLL~kdP~kRL  411 (516)
T KOG0690|consen  399 LSGLLKKDPKKRL  411 (516)
T ss_pred             HHHHhhcChHhhc
Confidence            6677889999994

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.57  E-value=1.1e-14  Score=135.55  Aligned_cols=81  Identities=30%  Similarity=0.397  Sum_probs=59.1

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC------cc--------------EE-EeeCC-----cEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH------VP--------------IV-ECHVG-----ALI  210 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~------~~--------------Lv-~c~~~-----~lv  210 (342)
                      ++|.  +.||+|+||.||+|....+  .||+|+++.......      .+              +. ++.+.     ++|
T Consensus         7 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv   86 (309)
T cd07845           7 TEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLV   86 (309)
T ss_pred             cceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEE
Confidence            4555  8899999999999998654  999999875432111      11              22 22211     333


Q ss_pred             E--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC
Q 039505          211 T--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS  244 (342)
Q Consensus       211 ~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a  244 (342)
                      +  +                          +++||+|||+   .+++||||||+||+++++.
T Consensus        87 ~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~  145 (309)
T cd07845          87 MEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHE---NFIIHRDLKVSNLLLTDKG  145 (309)
T ss_pred             EecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCC
Confidence            3  1                          8999999999   8999999999999999883

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.57  E-value=4.7e-15  Score=140.68  Aligned_cols=176  Identities=19%  Similarity=0.174  Sum_probs=106.8

Q ss_pred             CCHHHHHHHhhccC--cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCCC------cc-----------EE----Eee
Q 039505          151 NALELSLRVTNNFE--RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQGH------VP-----------IV----ECH  205 (342)
Q Consensus       151 ~~~~~l~~at~~f~--~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~~------~~-----------Lv----~c~  205 (342)
                      ....++..++++|.  +.||+|+||.||+|.... + .||+|+++.......      .+           ++    ++.
T Consensus         7 ~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~   86 (345)
T cd07877           7 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT   86 (345)
T ss_pred             hHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeee
Confidence            34566777888888  899999999999998754 4 999999875421111      01           22    221


Q ss_pred             CC---------cEEE--E------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--cccc
Q 039505          206 VG---------ALIT--I------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISP  248 (342)
Q Consensus       206 ~~---------~lv~--m------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~  248 (342)
                      ..         +++.  +                        +++||+|||+   .+|+||||||+||+++++.  ++.+
T Consensus        87 ~~~~~~~~~~~~lv~~~~~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kl~d  163 (345)
T cd07877          87 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILD  163 (345)
T ss_pred             ecccccccccEEEEehhcccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEcCCCCEEEec
Confidence            10         1221  1                        8899999999   9999999999999999883  3333


Q ss_pred             CCCCCc---cccccccCcceee---------------------------cCCCCcccccccc-cccccc----------c
Q 039505          249 VEGGTH---MSTTIAGTAGFLN---------------------------TKNPVISKSIENG-NSHLRD----------K  287 (342)
Q Consensus       249 ~~~~~~---~~~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~-~~~l~~----------~  287 (342)
                      ++....   ......|+..|+|                           ||+.|+....... ...+..          .
T Consensus       164 fg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  243 (345)
T cd07877         164 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLK  243 (345)
T ss_pred             ccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHh
Confidence            332211   1112345666665                           7888875432111 000000          0


Q ss_pred             cccc----------ccCCC----CCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          288 STVD----------LSFKG----EFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       288 ~~~d----------~~l~~----~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      .+.+          +....    +........+.+++..|++.+|.+||++.+++.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~  299 (345)
T cd07877         244 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  299 (345)
T ss_pred             hcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhc
Confidence            0000          00000    000012345789999999999999999999874

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.56  E-value=1.4e-15  Score=141.36  Aligned_cols=158  Identities=23%  Similarity=0.303  Sum_probs=112.1

Q ss_pred             HHHHh-hccCcccCcCCCeeEEEEEECCC--eEEEEEccCCCCC-C-Ccc------------------------------
Q 039505          156 SLRVT-NNFERVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQ-G-HVP------------------------------  200 (342)
Q Consensus       156 l~~at-~~f~~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~-~-~~~------------------------------  200 (342)
                      ..+++ -||-.+||+|+||.|..|.-+++  .+|||+++++..- + ..+                              
T Consensus       345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDR  424 (683)
T KOG0696|consen  345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDR  424 (683)
T ss_pred             ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhh
Confidence            33444 35669999999999999998877  8999999876321 1 111                              


Q ss_pred             ---EE-EeeCCcEEE-E-----------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCccccCCCC------
Q 039505          201 ---IV-ECHVGALIT-I-----------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGG------  252 (342)
Q Consensus       201 ---Lv-~c~~~~lv~-m-----------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~~~~~~~~------  252 (342)
                         ++ ||.++-|.| |                 ||-||-|||+   ++||.||||..|||||.++.+...+++      
T Consensus       425 LyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~---kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni  501 (683)
T KOG0696|consen  425 LYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI  501 (683)
T ss_pred             eeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhc---CCeeeeeccccceEeccCCceEeeecccccccc
Confidence               33 777664444 2                 8999999999   999999999999999998443332222      


Q ss_pred             --CccccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHH
Q 039505          253 --THMSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVG  304 (342)
Q Consensus       253 --~~~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~  304 (342)
                        ..++.+.+||+.|+|                          .|++||++..++..   . ..+.+...  .++.....
T Consensus       502 ~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~el---F-~aI~ehnv--syPKslSk  575 (683)
T KOG0696|consen  502 FDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDEL---F-QAIMEHNV--SYPKSLSK  575 (683)
T ss_pred             cCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHH---H-HHHHHccC--cCcccccH
Confidence              334566899999999                          89999998765431   1 12222222  24555566


Q ss_pred             HHHHHHHHcccccCCCCC
Q 039505          305 KAVEIAMASVSSKVNRRP  322 (342)
Q Consensus       305 ~l~~l~~~Cl~~~P~~RP  322 (342)
                      +.+.+...-+.+.|.+|.
T Consensus       576 EAv~ickg~ltK~P~kRL  593 (683)
T KOG0696|consen  576 EAVAICKGLLTKHPGKRL  593 (683)
T ss_pred             HHHHHHHHHhhcCCcccc
Confidence            677888888889999984

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.56  E-value=1.2e-14  Score=130.63  Aligned_cols=157  Identities=22%  Similarity=0.303  Sum_probs=98.8

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc--c------------------EE-EeeCC---cEEE--E----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV--P------------------IV-ECHVG---ALIT--I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~--~------------------Lv-~c~~~---~lv~--m----  212 (342)
                      +.||+|++|.||++.....  .||+|.+.........  .                  ++ ++..+   ++++  +    
T Consensus         6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~   85 (254)
T cd06627           6 DLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAENGS   85 (254)
T ss_pred             eEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCCCCc
Confidence            7899999999999988754  9999999766431000  0                  23 33333   3333  1    


Q ss_pred             ----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCcc------ccccccC
Q 039505          213 ----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHM------STTIAGT  262 (342)
Q Consensus       213 ----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~~------~~~~~Gt  262 (342)
                                            ++.||.|||+   .+|+||||||+||+++.+.  ++.+++.....      .....|+
T Consensus        86 L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~  162 (254)
T cd06627          86 LRQIIKKFGPFPESLVAVYVYQVLQGLAYLHE---QGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGT  162 (254)
T ss_pred             HHHHHHhccCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEECCCCCEEEeccccceecCCCcccccccccc
Confidence                                  8899999999   8999999999999999873  33333221110      1123466


Q ss_pred             cceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccc
Q 039505          263 AGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSS  316 (342)
Q Consensus       263 ~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~  316 (342)
                      ..|+|                          +|+.|+.......  ....  ... ......+......+.+++.+|+..
T Consensus       163 ~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~--~~~~--~~~-~~~~~~~~~~~~~~~~~i~~~l~~  237 (254)
T cd06627         163 PYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMA--ALFR--IVQ-DDHPPLPEGISPELKDFLMQCFQK  237 (254)
T ss_pred             hhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHH--HHHH--Hhc-cCCCCCCCCCCHHHHHHHHHHHhC
Confidence            66666                          6666665332111  0110  000 000111223345688999999999


Q ss_pred             cCCCCCCHHHHHH
Q 039505          317 KVNRRPLMNQVVM  329 (342)
Q Consensus       317 ~P~~RPsm~eV~~  329 (342)
                      +|++||++.+++.
T Consensus       238 ~p~~R~~~~~~l~  250 (254)
T cd06627         238 DPNLRPTAKQLLK  250 (254)
T ss_pred             ChhhCcCHHHHhc
Confidence            9999999999874

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.56  E-value=2.1e-15  Score=144.60  Aligned_cols=157  Identities=13%  Similarity=0.167  Sum_probs=106.0

Q ss_pred             cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCCc------c---------------EE-EeeCCcEEE--E-------
Q 039505          165 RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGHV------P---------------IV-ECHVGALIT--I-------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~~------~---------------Lv-~c~~~~lv~--m-------  212 (342)
                      +.||+||.+.|||+...+. .+|+|++.....+...      |               |+ |-..+-+.|  |       
T Consensus       367 k~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~Gd~DL  446 (677)
T KOG0596|consen  367 KQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMECGDIDL  446 (677)
T ss_pred             HhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeecccccH
Confidence            7899999999999998777 8888877654322111      0               33 333333333  3       


Q ss_pred             ----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-CccccCCCCCc--------ccccccc
Q 039505          213 ----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-SRISPVEGGTH--------MSTTIAG  261 (342)
Q Consensus       213 ----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-a~~~~~~~~~~--------~~~~~~G  261 (342)
                                            ++.++.++|.   ++|||.||||.|.|+=.. .|+++++-...        .....+|
T Consensus       447 ~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~---~gIVHSDLKPANFLlVkG~LKLIDFGIA~aI~~DTTsI~kdsQvG  523 (677)
T KOG0596|consen  447 NKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQ---HGIVHSDLKPANFLLVKGRLKLIDFGIANAIQPDTTSIVKDSQVG  523 (677)
T ss_pred             HHHHHhccCCCchHHHHHHHHHHHHHHHHHHH---hceeecCCCcccEEEEeeeEEeeeechhcccCccccceeeccccC
Confidence                                  8899999999   999999999999988766 66666554322        2344789


Q ss_pred             Ccceee-------------------------------------cCCCCcccccccccccccc--cccccccCCCCCCh-H
Q 039505          262 TAGFLN-------------------------------------TKNPVISKSIENGNSHLRD--KSTVDLSFKGEFDI-I  301 (342)
Q Consensus       262 t~~y~a-------------------------------------tG~~P~~~~~~~~~~~l~~--~~~~d~~l~~~~~~-~  301 (342)
                      |+.||+                                     .|+.||.....     .+.  ..+.||.-.-+++. .
T Consensus       524 T~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n-----~~aKl~aI~~P~~~Iefp~~~  598 (677)
T KOG0596|consen  524 TVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN-----QIAKLHAITDPNHEIEFPDIP  598 (677)
T ss_pred             cccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH-----HHHHHHhhcCCCccccccCCC
Confidence            999998                                     55666553321     111  44556533212211 1


Q ss_pred             HHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          302 SVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       302 ~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      .-.++++++..||+.||++||++.++++
T Consensus       599 ~~~~li~~mK~CL~rdPkkR~si~eLLq  626 (677)
T KOG0596|consen  599 ENDELIDVMKCCLARDPKKRWSIPELLQ  626 (677)
T ss_pred             CchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence            1223899999999999999999999875

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.56  E-value=1.1e-14  Score=130.70  Aligned_cols=157  Identities=18%  Similarity=0.200  Sum_probs=98.3

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc--c------------------EE-EeeC-C--cEEE--E----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV--P------------------IV-ECHV-G--ALIT--I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~--~------------------Lv-~c~~-~--~lv~--m----  212 (342)
                      +.||+|+||.||++....+  .+|+|++.........  .                  +. .+.. .  .+++  +    
T Consensus         6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~~~   85 (258)
T cd08215           6 KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGGD   85 (258)
T ss_pred             eeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEecCCCc
Confidence            7899999999999998744  9999998765332111  0                  11 1111 1  2222  0    


Q ss_pred             --------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------cccc
Q 039505          213 --------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTT  258 (342)
Q Consensus       213 --------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~  258 (342)
                                                +++||+|||+   .+++|+||+|+||+++++  .++.+++....      ....
T Consensus        86 L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~---~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~  162 (258)
T cd08215          86 LSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHS---RKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKT  162 (258)
T ss_pred             HHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHHeEEcCCCcEEECCccceeecccCcceecc
Confidence                                      8899999999   899999999999999987  33333322211      1122


Q ss_pred             cccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHH
Q 039505          259 IAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMA  312 (342)
Q Consensus       259 ~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~  312 (342)
                      ..|++.|+|                          +|+.|+.......   +.. ...... ....+......+.+++.+
T Consensus       163 ~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~---~~~-~~~~~~-~~~~~~~~~~~~~~~i~~  237 (258)
T cd08215         163 VVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLE---LAL-KILKGQ-YPPIPSQYSSELRNLVSS  237 (258)
T ss_pred             eeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHH---HHH-HHhcCC-CCCCCCCCCHHHHHHHHH
Confidence            356666766                          6777765432111   110 011111 111222334568899999


Q ss_pred             cccccCCCCCCHHHHHH
Q 039505          313 SVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       313 Cl~~~P~~RPsm~eV~~  329 (342)
                      ||..+|++||++.++++
T Consensus       238 ~l~~~p~~Rp~~~~ll~  254 (258)
T cd08215         238 LLQKDPEERPSIAQILQ  254 (258)
T ss_pred             HcCCChhhCcCHHHHhc
Confidence            99999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.56  E-value=1.1e-14  Score=133.41  Aligned_cols=76  Identities=29%  Similarity=0.437  Sum_probs=57.7

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC-c-----c--------------EE-Ee-eC--C--cEEE--E--
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH-V-----P--------------IV-EC-HV--G--ALIT--I--  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~-~-----~--------------Lv-~c-~~--~--~lv~--m--  212 (342)
                      +.||+|+||.||+|...+.  .+|+|++........ .     +              +. ++ ..  +  ++++  +  
T Consensus         5 ~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~   84 (287)
T cd07840           5 AQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMDH   84 (287)
T ss_pred             EEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEeccccc
Confidence            6899999999999998764  999999987631110 0     1              22 22 22  2  3444  2  


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK  243 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~  243 (342)
                                              +++||+|||+   .+++|+||||+||+++++
T Consensus        85 ~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~---~~~~h~dl~p~nil~~~~  136 (287)
T cd07840          85 DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHS---NGILHRDIKGSNILINND  136 (287)
T ss_pred             cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEEcCC
Confidence                                    8899999999   899999999999999988

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.56  E-value=9.8e-15  Score=130.44  Aligned_cols=158  Identities=22%  Similarity=0.290  Sum_probs=99.2

Q ss_pred             cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCCCcc------------------EE-EeeCC---cEEE--E------
Q 039505          165 RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQGHVP------------------IV-ECHVG---ALIT--I------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~~~~------------------Lv-~c~~~---~lv~--m------  212 (342)
                      +.||+|++|.||++.... + .+++|++..........                  ++ .+...   .+++  +      
T Consensus         6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~   85 (253)
T cd05122           6 EKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLK   85 (253)
T ss_pred             eeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCCcHH
Confidence            789999999999999874 4 89999997655311111                  22 22222   3333  1      


Q ss_pred             ---------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc-----ccccccCcc
Q 039505          213 ---------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM-----STTIAGTAG  264 (342)
Q Consensus       213 ---------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~-----~~~~~Gt~~  264 (342)
                                           +++||.|||+   .+++||||+|+||+++++  .++.+++.....     .....|+..
T Consensus        86 ~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~  162 (253)
T cd05122          86 DLLKSTNQTLTESQIAYVCKELLKGLEYLHS---NGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVGTPY  162 (253)
T ss_pred             HHHhhcCCCCCHHHHHHHHHHHHHHHHHhhc---CCEecCCCCHHHEEEccCCeEEEeeccccccccccccccceecCCc
Confidence                                 8899999999   999999999999999987  334433322111     123456666


Q ss_pred             eee--------------------------cCCCCcccccccccccccc-cccccccCCCCCChHHHHHHHHHHHHccccc
Q 039505          265 FLN--------------------------TKNPVISKSIENGNSHLRD-KSTVDLSFKGEFDIISVGKAVEIAMASVSSK  317 (342)
Q Consensus       265 y~a--------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~  317 (342)
                      |++                          +|+.|+.......  .+.. ....-+.+..  .......+.+++..||+.+
T Consensus       163 ~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~l~~~  238 (253)
T cd05122         163 WMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMK--ALFKIATNGPPGLRN--PEKWSDEFKDFLKKCLQKN  238 (253)
T ss_pred             ccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHH--HHHHHHhcCCCCcCc--ccccCHHHHHHHHHHccCC
Confidence            665                          7777766442111  0000 0000011111  1111355889999999999


Q ss_pred             CCCCCCHHHHHH
Q 039505          318 VNRRPLMNQVVM  329 (342)
Q Consensus       318 P~~RPsm~eV~~  329 (342)
                      |++|||+.++++
T Consensus       239 p~~R~t~~~~l~  250 (253)
T cd05122         239 PEKRPTAEQLLK  250 (253)
T ss_pred             hhhCCCHHHHhc
Confidence            999999999875

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.56  E-value=2.1e-14  Score=131.14  Aligned_cols=170  Identities=19%  Similarity=0.221  Sum_probs=104.5

Q ss_pred             HHHHHHhhccC--cc--cCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc--------------EE-EeeCC---cE
Q 039505          154 ELSLRVTNNFE--RV--PYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP--------------IV-ECHVG---AL  209 (342)
Q Consensus       154 ~~l~~at~~f~--~~--lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~--------------Lv-~c~~~---~l  209 (342)
                      .++....++|.  +.  ||+|+||.||++....+  .+|+|.+..........              +. ++...   ++
T Consensus         7 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~i   86 (267)
T PHA03390          7 SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAIEPMVHQLMKDNPNFIKLYYSVTTLKGHVL   86 (267)
T ss_pred             HHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchhhHHHHHHhhcCCCEEEEEEEEecCCeeEE
Confidence            34444455555  44  59999999999998655  89999987543221110              22 22222   33


Q ss_pred             EE--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC-ccccCCCCCc----cc
Q 039505          210 IT--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS-RISPVEGGTH----MS  256 (342)
Q Consensus       210 v~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a-~~~~~~~~~~----~~  256 (342)
                      |+  +                          +++||.|||+   .+++||||||+||+++.+. .+...+++..    ..
T Consensus        87 v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~  163 (267)
T PHA03390         87 IMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHK---HNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP  163 (267)
T ss_pred             EEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCC
Confidence            33  1                          8999999999   8999999999999999874 4333333211    11


Q ss_pred             cccccCcceee--------------------------cCCCCcccccccccccccc-cccccccCCCCCChHHHHHHHHH
Q 039505          257 TTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRD-KSTVDLSFKGEFDIISVGKAVEI  309 (342)
Q Consensus       257 ~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~l~~~~~~~~~~~l~~l  309 (342)
                      ....|+..|+|                          ||+.|+........ .+.. ........  .........+.++
T Consensus       164 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~l  240 (267)
T PHA03390        164 SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEEL-DLESLLKRQQKKL--PFIKNVSKNANDF  240 (267)
T ss_pred             ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchh-hHHHHHHhhcccC--CcccccCHHHHHH
Confidence            22457777777                          88888874432210 0000 00011111  1122344568889


Q ss_pred             HHHcccccCCCCCC-HHHHHH
Q 039505          310 AMASVSSKVNRRPL-MNQVVM  329 (342)
Q Consensus       310 ~~~Cl~~~P~~RPs-m~eV~~  329 (342)
                      +.+||+.+|.+||+ +.|+++
T Consensus       241 i~~~l~~~p~~R~~~~~~~l~  261 (267)
T PHA03390        241 VQSMLKYNINYRLTNYNEIIK  261 (267)
T ss_pred             HHHHhccChhhCCchHHHHhc
Confidence            99999999999995 688874

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.55  E-value=3.2e-14  Score=130.36  Aligned_cols=162  Identities=19%  Similarity=0.265  Sum_probs=97.7

Q ss_pred             cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCCC------cc-----------------EE-EeeCC--------cEE
Q 039505          165 RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQGH------VP-----------------IV-ECHVG--------ALI  210 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~~------~~-----------------Lv-~c~~~--------~lv  210 (342)
                      +.||+|+||.||+|.+.. + .||+|++........      .+                 ++ +|...        .++
T Consensus         5 ~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l~   84 (287)
T cd07838           5 AEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLV   84 (287)
T ss_pred             EEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEEE
Confidence            789999999999999976 4 999999974422110      00                 33 33221        122


Q ss_pred             E--E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCcc----
Q 039505          211 T--I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHM----  255 (342)
Q Consensus       211 ~--m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~~----  255 (342)
                      +  +                           +++||+|||+   .+++|+||||+||+++++.  ++.+++.....    
T Consensus        85 ~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~---~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~  161 (287)
T cd07838          85 FEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHS---HRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFEM  161 (287)
T ss_pred             ehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhEEEccCCCEEEeccCcceeccCCc
Confidence            1  1                           8899999999   8999999999999999983  33333221111    


Q ss_pred             -ccccccCcceee--------------------------cCCCCcccccccc-cccccc------------c-----ccc
Q 039505          256 -STTIAGTAGFLN--------------------------TKNPVISKSIENG-NSHLRD------------K-----STV  290 (342)
Q Consensus       256 -~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~-~~~l~~------------~-----~~~  290 (342)
                       .....++..|+|                          ||++|+....... ...+.+            .     ...
T Consensus       162 ~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (287)
T cd07838         162 ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSF  241 (287)
T ss_pred             ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhc
Confidence             112335556665                          7777766433211 000000            0     000


Q ss_pred             cccCCC---CCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          291 DLSFKG---EFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       291 d~~l~~---~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ......   ....+....+.+++.+||+.+|++||++.+++.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~  283 (287)
T cd07838         242 PSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ  283 (287)
T ss_pred             ccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence            000000   001122356788999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.55  E-value=4.1e-15  Score=134.30  Aligned_cols=160  Identities=16%  Similarity=0.238  Sum_probs=97.4

Q ss_pred             cCcCCCeeEEEEEECC-C-eEEEEEccCCCCCCCc---c------------------EE-EeeCC---cEEE--E-----
Q 039505          167 PYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQGHV---P------------------IV-ECHVG---ALIT--I-----  212 (342)
Q Consensus       167 lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~~~---~------------------Lv-~c~~~---~lv~--m-----  212 (342)
                      ||+|+||.||++.... + .+|+|.+.........   .                  +. .+..+   ++++  +     
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            6899999999999976 4 9999998755321100   0                  11 11111   2222  1     


Q ss_pred             ---------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc--------------c
Q 039505          213 ---------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH--------------M  255 (342)
Q Consensus       213 ---------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~--------------~  255 (342)
                                           +++||+|||+   .+++||||+|+||+++++  .++.+++....              .
T Consensus        81 ~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  157 (265)
T cd05579          81 ASLLENVGSLDEDVARIYIAEIVLALEYLHS---NGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKE  157 (265)
T ss_pred             HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---cCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccccc
Confidence                                 8999999999   999999999999999988  33333321110              1


Q ss_pred             ccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHH
Q 039505          256 STTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEI  309 (342)
Q Consensus       256 ~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l  309 (342)
                      .....++..|++                          ||+.|+.......   +.. .+................+.++
T Consensus       158 ~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~  233 (265)
T cd05579         158 DKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEE---IFQ-NILNGKIEWPEDVEVSDEAIDL  233 (265)
T ss_pred             ccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH---HHH-HHhcCCcCCCccccCCHHHHHH
Confidence            112345666665                          7888876443221   000 0110011000011124568899


Q ss_pred             HHHcccccCCCCCCHHHHHHHHHh
Q 039505          310 AMASVSSKVNRRPLMNQVVMVREQ  333 (342)
Q Consensus       310 ~~~Cl~~~P~~RPsm~eV~~~L~~  333 (342)
                      +.+||+.+|++|||+.+|.+.|+.
T Consensus       234 i~~~l~~~p~~Rpt~~~~~~~l~~  257 (265)
T cd05579         234 ISKLLVPDPEKRLGAKSIEEIKNH  257 (265)
T ss_pred             HHHHhcCCHhhcCCCccHHHHhcC
Confidence            999999999999999666665543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.55  E-value=1.1e-14  Score=135.05  Aligned_cols=159  Identities=16%  Similarity=0.146  Sum_probs=98.3

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc------------------EE-EeeCC---cEEE--E------
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP------------------IV-ECHVG---ALIT--I------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~------------------Lv-~c~~~---~lv~--m------  212 (342)
                      ..||+|+||.||++.....  .||||++..........                  +. ++..+   ++++  +      
T Consensus        26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~  105 (292)
T cd06657          26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT  105 (292)
T ss_pred             HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence            5799999999999998644  99999886433211110                  22 22222   3332  1      


Q ss_pred             -------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc------ccccccCcce
Q 039505          213 -------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM------STTIAGTAGF  265 (342)
Q Consensus       213 -------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~------~~~~~Gt~~y  265 (342)
                                         ++.||+|||+   .+++||||||+||+++++  .++.+++.....      .....|+++|
T Consensus       106 ~~~~~~~~~~~~~~~~~~ql~~~l~~lH~---~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y  182 (292)
T cd06657         106 DIVTHTRMNEEQIAAVCLAVLKALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYW  182 (292)
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCccc
Confidence                               8899999999   899999999999999987  334333322111      1224577778


Q ss_pred             ee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCC
Q 039505          266 LN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVN  319 (342)
Q Consensus       266 ~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~  319 (342)
                      ++                          ||+.|+............ .....+.+..  .......+.+++.+||+.+|.
T Consensus       183 ~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~l~~li~~~l~~~P~  259 (292)
T cd06657         183 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPKLKN--LHKVSPSLKGFLDRLLVRDPA  259 (292)
T ss_pred             cCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-HhhCCcccCC--cccCCHHHHHHHHHHHhCCcc
Confidence            77                          677776543211100000 0011111111  112234577889999999999


Q ss_pred             CCCCHHHHHH
Q 039505          320 RRPLMNQVVM  329 (342)
Q Consensus       320 ~RPsm~eV~~  329 (342)
                      +||++.+++.
T Consensus       260 ~R~~~~~ll~  269 (292)
T cd06657         260 QRATAAELLK  269 (292)
T ss_pred             cCcCHHHHhc
Confidence            9999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.55  E-value=1e-14  Score=131.33  Aligned_cols=157  Identities=21%  Similarity=0.213  Sum_probs=98.8

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc------c--------------EE--EeeCC--cEEE--E----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV------P--------------IV--ECHVG--ALIT--I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~------~--------------Lv--~c~~~--~lv~--m----  212 (342)
                      +.||+|+||.||++.....  .+|+|.+.........      +              +.  ++...  ++++  +    
T Consensus         6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~   85 (256)
T cd08530           6 KKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPFGD   85 (256)
T ss_pred             eeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcCCCC
Confidence            7899999999999987644  8999998754321110      0              11  11111  2222  1    


Q ss_pred             --------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc----cccccc
Q 039505          213 --------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH----MSTTIA  260 (342)
Q Consensus       213 --------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~----~~~~~~  260 (342)
                                                +++||+|||+   .+++||||+|+||+++++  .++.+++....    ......
T Consensus        86 L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~---~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~  162 (256)
T cd08530          86 LSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHE---QKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKTQI  162 (256)
T ss_pred             HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEEecCCcEEEeeccchhhhccCCccccc
Confidence                                      8899999999   999999999999999987  33333321111    111234


Q ss_pred             cCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcc
Q 039505          261 GTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASV  314 (342)
Q Consensus       261 Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl  314 (342)
                      |+..|++                          +|+.|+.......   +. ..+... .....+......+.+++.+|+
T Consensus       163 ~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~---~~-~~~~~~-~~~~~~~~~~~~~~~li~~~l  237 (256)
T cd08530         163 GTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD---LR-YKVQRG-KYPPIPPIYSQDLQNFIRSML  237 (256)
T ss_pred             CCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HH-HHHhcC-CCCCCchhhCHHHHHHHHHHc
Confidence            5666655                          7887776543211   00 001111 111222344566899999999


Q ss_pred             cccCCCCCCHHHHHH
Q 039505          315 SSKVNRRPLMNQVVM  329 (342)
Q Consensus       315 ~~~P~~RPsm~eV~~  329 (342)
                      +.+|++||++.++++
T Consensus       238 ~~~p~~Rp~~~~~l~  252 (256)
T cd08530         238 QVKPKLRPNCDKILA  252 (256)
T ss_pred             CCCcccCCCHHHHhc
Confidence            999999999999875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.55  E-value=2.4e-15  Score=145.82  Aligned_cols=175  Identities=18%  Similarity=0.158  Sum_probs=118.4

Q ss_pred             CHHHHHHHhhccCcccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc-----------------EE-EeeCC---c
Q 039505          152 ALELSLRVTNNFERVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP-----------------IV-ECHVG---A  208 (342)
Q Consensus       152 ~~~~l~~at~~f~~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~-----------------Lv-~c~~~---~  208 (342)
                      .-.|+.+..-...+.||-|.||.||.|.|+.-  .||||.++.+.-.-.+.                 |+ .|...   +
T Consensus       260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFY  339 (1157)
T KOG4278|consen  260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFY  339 (1157)
T ss_pred             chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeE
Confidence            34455443333448999999999999999876  89999998765322111                 45 66554   3


Q ss_pred             EEE--E----------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCccc
Q 039505          209 LIT--I----------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHMS  256 (342)
Q Consensus       209 lv~--m----------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~~  256 (342)
                      ++.  |                            |+.|++||..   +.+|||||-..|.|+.++  .++.+++.....+
T Consensus       340 IiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEk---knFIHRDLAARNCLVgEnhiVKvADFGLsRlMt  416 (1157)
T KOG4278|consen  340 IITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHIVKVADFGLSRLMT  416 (1157)
T ss_pred             EEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHH---hhhhhhhhhhhhccccccceEEeeccchhhhhc
Confidence            333  3                            8999999999   999999999999999999  3444333221110


Q ss_pred             ----ccccc---Ccceee---------------------------cCCCCcccccccccccccccccccccCCCCCChHH
Q 039505          257 ----TTIAG---TAGFLN---------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIIS  302 (342)
Q Consensus       257 ----~~~~G---t~~y~a---------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~  302 (342)
                          +.-.|   .+-|.|                           .|..|+.+..-...     .+++....+-+.+..|
T Consensus       417 gDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqV-----Y~LLEkgyRM~~PeGC  491 (1157)
T KOG4278|consen  417 GDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV-----YGLLEKGYRMDGPEGC  491 (1157)
T ss_pred             CCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHH-----HHHHhccccccCCCCC
Confidence                00011   111222                           56666654321110     3445555556667888


Q ss_pred             HHHHHHHHHHcccccCCCCCCHHHHHHHHHhc
Q 039505          303 VGKAVEIAMASVSSKVNRRPLMNQVVMVREQG  334 (342)
Q Consensus       303 ~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i  334 (342)
                      +.++.+|++.||+.+|.+||+++|+-+.++.+
T Consensus       492 PpkVYeLMraCW~WsPsDRPsFaeiHqafEtm  523 (1157)
T KOG4278|consen  492 PPKVYELMRACWNWSPSDRPSFAEIHQAFETM  523 (1157)
T ss_pred             CHHHHHHHHHHhcCCcccCccHHHHHHHHHHH
Confidence            99999999999999999999999998888765

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.54  E-value=2.2e-14  Score=135.28  Aligned_cols=76  Identities=24%  Similarity=0.278  Sum_probs=56.9

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC------------------cc--------------EE-EeeCC--
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH------------------VP--------------IV-ECHVG--  207 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~------------------~~--------------Lv-~c~~~--  207 (342)
                      +.||+|+||+||+|.....  .||||+++.......                  .+              ++ ++..+  
T Consensus        15 ~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   94 (335)
T PTZ00024         15 AHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGDF   94 (335)
T ss_pred             hcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCCc
Confidence            6799999999999997644  999999865432210                  11              23 33222  


Q ss_pred             -cEEE--E-------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC
Q 039505          208 -ALIT--I-------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK  243 (342)
Q Consensus       208 -~lv~--m-------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~  243 (342)
                       ++++  +                         ++.||+|||+   .+|+||||||+||+++.+
T Consensus        95 ~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~---~~i~H~dl~~~nill~~~  155 (335)
T PTZ00024         95 INLVMDIMASDLKKVVDRKIRLTESQVKCILLQILNGLNVLHK---WYFMHRDLSPANIFINSK  155 (335)
T ss_pred             EEEEEeccccCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHeEECCC
Confidence             3333  1                         8899999999   999999999999999988

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.54  E-value=3.7e-15  Score=142.00  Aligned_cols=161  Identities=14%  Similarity=0.195  Sum_probs=104.5

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc---------------------------------EE--EeeCC
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP---------------------------------IV--ECHVG  207 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~---------------------------------Lv--~c~~~  207 (342)
                      +++|+|+||.++..+++..  .+++|.+..........                                 ++  ||.++
T Consensus        10 ~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg   89 (426)
T KOG0589|consen   10 RQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCEGG   89 (426)
T ss_pred             hhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEeecCCC
Confidence            8999999999999888755  89999997764322221                                 22  66655


Q ss_pred             ---------c-EEEE----------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------ccccc
Q 039505          208 ---------A-LITI----------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTI  259 (342)
Q Consensus       208 ---------~-lv~m----------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~  259 (342)
                               - .-+.          ++.|+.|||+   ..|+|||||++||+++.+  .++.+++.+..      ...++
T Consensus        90 ~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~---~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~a~tv  166 (426)
T KOG0589|consen   90 DLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHE---NRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSLASTV  166 (426)
T ss_pred             CHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHh---hhhhcccchhhhhhccccCceeecchhhhhhcCCchhhhhee
Confidence                     0 1111          8999999998   999999999999999998  33333332211      23457


Q ss_pred             ccCcceee---cCCCCcccccccc--cc------------------cccccccccccCCCCCChHHHHHHHHHHHHcccc
Q 039505          260 AGTAGFLN---TKNPVISKSIENG--NS------------------HLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSS  316 (342)
Q Consensus       260 ~Gt~~y~a---tG~~P~~~~~~~~--~~------------------~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~  316 (342)
                      +||+.||.   .--.|+....+..  ..                  .++ .++.. ....+.+.....++..++..|++.
T Consensus       167 vGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li-~ki~~-~~~~Plp~~ys~el~~lv~~~l~~  244 (426)
T KOG0589|consen  167 VGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELI-LKINR-GLYSPLPSMYSSELRSLVKSMLRK  244 (426)
T ss_pred             cCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHH-HHHhh-ccCCCCCccccHHHHHHHHHHhhc
Confidence            89999998   2222332221111  00                  000 11111 111223444556688899999999


Q ss_pred             cCCCCCCHHHHHHH
Q 039505          317 KVNRRPLMNQVVMV  330 (342)
Q Consensus       317 ~P~~RPsm~eV~~~  330 (342)
                      +|+.||++.+++.+
T Consensus       245 ~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  245 NPEHRPSALELLRR  258 (426)
T ss_pred             CCccCCCHHHHhhC
Confidence            99999999999865

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.54  E-value=1.1e-14  Score=138.11  Aligned_cols=167  Identities=19%  Similarity=0.190  Sum_probs=99.2

Q ss_pred             HhhccC--cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCCC------cc-----------EE----EeeCC------
Q 039505          159 VTNNFE--RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQGH------VP-----------IV----ECHVG------  207 (342)
Q Consensus       159 at~~f~--~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~~------~~-----------Lv----~c~~~------  207 (342)
                      ..++|.  +.||+|+||.||+|.... + .||||++........      .+           ++    .+...      
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07880          13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF   92 (343)
T ss_pred             cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence            345565  789999999999998764 4 999999864321110      01           22    22111      


Q ss_pred             ---cEEE--E------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCc--cccCCCCCcc-
Q 039505          208 ---ALIT--I------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSR--ISPVEGGTHM-  255 (342)
Q Consensus       208 ---~lv~--m------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~--~~~~~~~~~~-  255 (342)
                         ++++  +                        +++||+|||+   .+|+||||||+||+++++..  +.+++..... 
T Consensus        93 ~~~~lv~e~~~~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~  169 (343)
T cd07880          93 HDFYLVMPFMGTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLARQTD  169 (343)
T ss_pred             ceEEEEEecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccccccc
Confidence               2222  1                        8899999999   99999999999999998833  3333322111 


Q ss_pred             --ccccccCcceee---------------------------cCCCCcccccccc-cccccc----------ccc------
Q 039505          256 --STTIAGTAGFLN---------------------------TKNPVISKSIENG-NSHLRD----------KST------  289 (342)
Q Consensus       256 --~~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~-~~~l~~----------~~~------  289 (342)
                        .....+++.|++                           +|+.|+....... ...+..          ..+      
T Consensus       170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (343)
T cd07880         170 SEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAK  249 (343)
T ss_pred             cCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHH
Confidence              112345555554                           7888876432110 000000          000      


Q ss_pred             --cc--ccCCC----CCChHHHHHHHHHHHHcccccCCCCCCHHHHH
Q 039505          290 --VD--LSFKG----EFDIISVGKAVEIAMASVSSKVNRRPLMNQVV  328 (342)
Q Consensus       290 --~d--~~l~~----~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~  328 (342)
                        ..  +....    .........+.+++.+|++.+|++|||+.+++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l  296 (343)
T cd07880         250 NYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEAL  296 (343)
T ss_pred             HHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHh
Confidence              00  00000    00112234578999999999999999999998

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.54  E-value=4e-14  Score=126.99  Aligned_cols=159  Identities=20%  Similarity=0.244  Sum_probs=100.7

Q ss_pred             cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCCC--cc---------------EE----EeeC---C--cEEE--E--
Q 039505          165 RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQGH--VP---------------IV----ECHV---G--ALIT--I--  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~~--~~---------------Lv----~c~~---~--~lv~--m--  212 (342)
                      +.||+|++|.||+|.... + .|++|++........  ..               ++    .+..   .  .+++  +  
T Consensus         6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~   85 (260)
T cd06606           6 ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSG   85 (260)
T ss_pred             eEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEecCC
Confidence            789999999999999874 4 999999876543100  00               22    2222   2  3333  1  


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCccccCCCCCc--c--------ccc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH--M--------STT  258 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~~~~~~~~~~--~--------~~~  258 (342)
                                              +++||+|||+   .+++|+||+|+||+++.+..+...+++..  .        ...
T Consensus        86 ~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~  162 (260)
T cd06606          86 GSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHS---NGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGS  162 (260)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEcccccEEecccccccccccC
Confidence                                    8899999999   99999999999999998733322222211  0        122


Q ss_pred             cccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHH
Q 039505          259 IAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMA  312 (342)
Q Consensus       259 ~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~  312 (342)
                      ..++..|++                          +|+.|+.......  ... ............+......+.+++.+
T Consensus       163 ~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~l~~~i~~  239 (260)
T cd06606         163 VRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPM--AAL-YKIGSSGEPPEIPEHLSEEAKDFLRK  239 (260)
T ss_pred             CCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH--HHH-HhccccCCCcCCCcccCHHHHHHHHH
Confidence            345566665                          7788876543111  000 11111111122233335668899999


Q ss_pred             cccccCCCCCCHHHHHH
Q 039505          313 SVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       313 Cl~~~P~~RPsm~eV~~  329 (342)
                      |++.+|++||++.+++.
T Consensus       240 ~l~~~p~~Rp~~~~ll~  256 (260)
T cd06606         240 CLRRDPKKRPTADELLQ  256 (260)
T ss_pred             hCcCChhhCCCHHHHhh
Confidence            99999999999999975

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.53  E-value=1.2e-14  Score=145.71  Aligned_cols=159  Identities=23%  Similarity=0.326  Sum_probs=108.0

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc-----------------------------------EE--Eee
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP-----------------------------------IV--ECH  205 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~-----------------------------------Lv--~c~  205 (342)
                      ++||+|.+|.||+++....  .+|||++......+.+.                                   ||  ||.
T Consensus        25 evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~  104 (953)
T KOG0587|consen   25 EVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCG  104 (953)
T ss_pred             EEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeeccC
Confidence            8999999999999987654  88999887765443322                                   33  666


Q ss_pred             CC---cEEE------E-----------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCccccCCCCC--cc------cc
Q 039505          206 VG---ALIT------I-----------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGT--HM------ST  257 (342)
Q Consensus       206 ~~---~lv~------m-----------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~~~~~~~~~--~~------~~  257 (342)
                      .|   -||-      |           +++||.+||.   ..+||||||-.||||+.++++...+++.  +.      ..
T Consensus       105 gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~---nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~grRn  181 (953)
T KOG0587|consen  105 GGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHN---NKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTVGRRN  181 (953)
T ss_pred             CccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhh---cceeeecccCceEEEeccCcEEEeeeeeeeeeeccccccc
Confidence            65   1111      1           8899999999   9999999999999999996665554442  22      23


Q ss_pred             ccccCcceee-------------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHH
Q 039505          258 TIAGTAGFLN-------------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKA  306 (342)
Q Consensus       258 ~~~Gt~~y~a-------------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l  306 (342)
                      +..||+.|||                               -|.+|+..+....  .+.. -.-.|...-..+....+++
T Consensus       182 T~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmr--aLF~-IpRNPPPkLkrp~kWs~~F  258 (953)
T KOG0587|consen  182 TFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMR--ALFL-IPRNPPPKLKRPKKWSKKF  258 (953)
T ss_pred             CcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhh--hhcc-CCCCCCccccchhhHHHHH
Confidence            4789999999                               2333333322111  0000 0011111122345567789


Q ss_pred             HHHHHHcccccCCCCCCHHHHHH
Q 039505          307 VEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       307 ~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      .+.+..|+.++-++||++.++++
T Consensus       259 ndFIs~cL~Kd~e~RP~~~~ll~  281 (953)
T KOG0587|consen  259 NDFISTCLVKDYEQRPSTEELLK  281 (953)
T ss_pred             HHHHHHHHhhccccCcchhhhcc
Confidence            99999999999999999988764

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.53  E-value=1.7e-14  Score=133.78  Aligned_cols=81  Identities=28%  Similarity=0.484  Sum_probs=58.3

Q ss_pred             hhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC------cc-----------EE----EeeC--------
Q 039505          160 TNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH------VP-----------IV----ECHV--------  206 (342)
Q Consensus       160 t~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~------~~-----------Lv----~c~~--------  206 (342)
                      .++|.  +.||+|+||.||+|.....  .+|||++........      .+           ++    ++..        
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            35666  8899999999999998754  899999865432111      11           11    1110        


Q ss_pred             C---cEEE--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC
Q 039505          207 G---ALIT--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK  243 (342)
Q Consensus       207 ~---~lv~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~  243 (342)
                      .   ++++  +                          +++||+|||+   .+|+||||||+||+++++
T Consensus        87 ~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~---~~i~H~dl~p~nil~~~~  151 (311)
T cd07866          87 RGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHE---NHILHRDIKAANILIDNQ  151 (311)
T ss_pred             CceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCC
Confidence            0   1221  1                          8899999999   899999999999999988

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.53  E-value=2.5e-14  Score=134.78  Aligned_cols=161  Identities=16%  Similarity=0.133  Sum_probs=96.5

Q ss_pred             cccCcCCCeeEEEEEECC---C-eEEEEEccCCCCCCC------cc------------EE----Eee---CC----cEEE
Q 039505          165 RVPYKGGFITVYHGQLVK---S-EVAMKMLSPSSSQGH------VP------------IV----ECH---VG----ALIT  211 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~---~-~vAVK~l~~~~~~~~------~~------------Lv----~c~---~~----~lv~  211 (342)
                      +.||+|+||.||+++...   + .||+|++........      .+            ++    ++.   ..    +++.
T Consensus         6 ~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~   85 (332)
T cd07857           6 KELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYE   85 (332)
T ss_pred             EEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEEE
Confidence            789999999999999863   4 899999865321110      01            22    111   11    1111


Q ss_pred             --E-------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc-------
Q 039505          212 --I-------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM-------  255 (342)
Q Consensus       212 --m-------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~-------  255 (342)
                        +                         ++.||+|||+   .+|+||||||+|||++++  .++.+++.....       
T Consensus        86 e~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~---~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~  162 (332)
T cd07857          86 ELMEADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHS---ANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGEN  162 (332)
T ss_pred             ecccCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHeEEcCCCCEEeCcCCCceecccccccc
Confidence              1                         8899999999   999999999999999988  344443322110       


Q ss_pred             ---ccccccCcceee---------------------------cCCCCcccccccc-cccccc----------cccccc--
Q 039505          256 ---STTIAGTAGFLN---------------------------TKNPVISKSIENG-NSHLRD----------KSTVDL--  292 (342)
Q Consensus       256 ---~~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~-~~~l~~----------~~~~d~--  292 (342)
                         .....||..|+|                           +|+.|+....... ...++.          ..+.++  
T Consensus       163 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (332)
T cd07857         163 AGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKA  242 (332)
T ss_pred             cccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhH
Confidence               112457777877                           6777765432100 000000          000000  


Q ss_pred             -----------cCC-CCCChHHHHHHHHHHHHcccccCCCCCCHHHHH
Q 039505          293 -----------SFK-GEFDIISVGKAVEIAMASVSSKVNRRPLMNQVV  328 (342)
Q Consensus       293 -----------~l~-~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~  328 (342)
                                 ... ..........+.+++.+|++.+|++|||+.+++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll  290 (332)
T cd07857         243 QNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEAL  290 (332)
T ss_pred             HHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHh
Confidence                       000 000011234688999999999999999999987

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.53  E-value=2e-14  Score=131.44  Aligned_cols=76  Identities=25%  Similarity=0.342  Sum_probs=56.0

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC--c----c-----------EE----EeeCC---cEEE--E----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH--V----P-----------IV----ECHVG---ALIT--I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~--~----~-----------Lv----~c~~~---~lv~--m----  212 (342)
                      +.||+|++|.||+|....+  .+|+|.++.......  .    +           ++    ++..+   ++++  +    
T Consensus         5 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~l   84 (283)
T cd05118           5 GKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMDTDL   84 (283)
T ss_pred             eeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccCCCH
Confidence            6799999999999998644  899999876543311  0    0           11    12111   2222  1    


Q ss_pred             ----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC
Q 039505          213 ----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK  243 (342)
Q Consensus       213 ----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~  243 (342)
                                            +++||.|||+   .+|+|+||||+||+++++
T Consensus        85 ~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~  134 (283)
T cd05118          85 YKLIKDRQRGLPESLIKSYLYQLLQGLAFCHS---HGILHRDLKPENLLINTE  134 (283)
T ss_pred             HHHHHhhcccCCHHHHHHHHHHHHHHHHHHHH---CCeeecCcCHHHEEECCC
Confidence                                  8999999999   999999999999999987

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.53  E-value=1e-14  Score=134.35  Aligned_cols=116  Identities=19%  Similarity=0.213  Sum_probs=70.8

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-------cccccccCcceee----------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-------MSTTIAGTAGFLN----------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-------~~~~~~Gt~~y~a----------------  267 (342)
                      +++||+|||+   .+++||||||+||+++.+  .++.+++....       ......|+..|++                
T Consensus       114 l~~~l~~lH~---~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~D  190 (288)
T cd05583         114 IVLALDHLHQ---LGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVD  190 (288)
T ss_pred             HHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEEECccccccccccccccccccCCccccCHHHhcCCCCCCcchhh
Confidence            8999999999   999999999999999988  33433322111       0112346666665                


Q ss_pred             ------------cCCCCcccccccc-cccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhc
Q 039505          268 ------------TKNPVISKSIENG-NSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQG  334 (342)
Q Consensus       268 ------------tG~~P~~~~~~~~-~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i  334 (342)
                                  ||..|+....... ...+. ..+....  ...+......+.+++.+||+.+|++|||+.+|.+.|+..
T Consensus       191 v~slG~il~el~tg~~p~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~  267 (288)
T cd05583         191 WWSLGVLTFELLTGASPFTVDGEQNSQSEIS-RRILKSK--PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP  267 (288)
T ss_pred             hHHHHHHHHHHHhCCCCcccCcccchHHHHH-HHHHccC--CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence                        6666664321110 00000 0111100  111122234578899999999999999999888777654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.53  E-value=2.1e-14  Score=132.31  Aligned_cols=159  Identities=20%  Similarity=0.230  Sum_probs=94.6

Q ss_pred             cccCcCCCeeEEEEEEC----CC-eEEEEEccCCCCCCC--------cc------------EE----EeeCC---cEEE-
Q 039505          165 RVPYKGGFITVYHGQLV----KS-EVAMKMLSPSSSQGH--------VP------------IV----ECHVG---ALIT-  211 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~----~~-~vAVK~l~~~~~~~~--------~~------------Lv----~c~~~---~lv~-  211 (342)
                      +.||+|+||.||++...    ++ .||+|++........        .+            ++    ++..+   ++++ 
T Consensus         6 ~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (290)
T cd05613           6 KVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLILD   85 (290)
T ss_pred             eeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEEEe
Confidence            78999999999999873    44 899999865321100        01            11    12222   3333 


Q ss_pred             -E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc-------c
Q 039505          212 -I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH-------M  255 (342)
Q Consensus       212 -m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~-------~  255 (342)
                       +                          +++||.|||+   .+++||||||+|||++++.  ++.+++....       .
T Consensus        86 ~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~  162 (290)
T cd05613          86 YINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVER  162 (290)
T ss_pred             cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEECCCCCEEEeeCccceecccccccc
Confidence             1                          8899999999   9999999999999999883  3333322111       0


Q ss_pred             ccccccCcceee----------------------------cCCCCcccccccc-cccccccccccccCCCCCChHHHHHH
Q 039505          256 STTIAGTAGFLN----------------------------TKNPVISKSIENG-NSHLRDKSTVDLSFKGEFDIISVGKA  306 (342)
Q Consensus       256 ~~~~~Gt~~y~a----------------------------tG~~P~~~~~~~~-~~~l~~~~~~d~~l~~~~~~~~~~~l  306 (342)
                      .....|+..|+|                            ||+.|+....... ...+. ..+...  ....+......+
T Consensus       163 ~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~  239 (290)
T cd05613         163 AYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEIS-RRILKS--EPPYPQEMSALA  239 (290)
T ss_pred             cccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHH-HHhhcc--CCCCCccCCHHH
Confidence            112346666665                            7777765322111 00000 001000  011222334557


Q ss_pred             HHHHHHcccccCCCCC-----CHHHHHH
Q 039505          307 VEIAMASVSSKVNRRP-----LMNQVVM  329 (342)
Q Consensus       307 ~~l~~~Cl~~~P~~RP-----sm~eV~~  329 (342)
                      .+++.+||+.+|++||     ++.++..
T Consensus       240 ~~ll~~~l~~~p~~R~~~~~~~~~~l~~  267 (290)
T cd05613         240 KDIIQRLLMKDPKKRLGCGPSDADEIKK  267 (290)
T ss_pred             HHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence            8899999999999997     5666654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.53  E-value=3.5e-14  Score=130.64  Aligned_cols=164  Identities=18%  Similarity=0.220  Sum_probs=101.4

Q ss_pred             HhhccC--cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCCC---cc--------------EE-EeeCC---cEEE--
Q 039505          159 VTNNFE--RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQGH---VP--------------IV-ECHVG---ALIT--  211 (342)
Q Consensus       159 at~~f~--~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~~---~~--------------Lv-~c~~~---~lv~--  211 (342)
                      .+++|.  +.||+|+||.||+|.+.. + .+|+|++........   .+              +. ++...   ++++  
T Consensus        17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   96 (286)
T cd06614          17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEY   96 (286)
T ss_pred             ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEec
Confidence            344455  889999999999999974 3 999999976543100   01              22 22222   3332  


Q ss_pred             E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------cc
Q 039505          212 I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MS  256 (342)
Q Consensus       212 m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~  256 (342)
                      +                           ++.||+|||+   .+++|+||||+||+++.+  .++.+++....      ..
T Consensus        97 ~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~---~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~  173 (286)
T cd06614          97 MDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHS---QNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKR  173 (286)
T ss_pred             cCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCChhhEEEcCCCCEEECccchhhhhccchhhh
Confidence            1                           8899999999   999999999999999987  33333322111      11


Q ss_pred             cccccCcceee--------------------------cCCCCcccccccccccccccccccccCCC-CCChHHHHHHHHH
Q 039505          257 TTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKG-EFDIISVGKAVEI  309 (342)
Q Consensus       257 ~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~-~~~~~~~~~l~~l  309 (342)
                      ....++.+|++                          ||+.|+.......  ..  ..+....... .........+.++
T Consensus       174 ~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~l~~l  249 (286)
T cd06614         174 NSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLR--AL--FLITTKGIPPLKNPEKWSPEFKDF  249 (286)
T ss_pred             ccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHH--HH--HHHHhcCCCCCcchhhCCHHHHHH
Confidence            22345666766                          6777765432211  00  0000101100 1111134568899


Q ss_pred             HHHcccccCCCCCCHHHHHH
Q 039505          310 AMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       310 ~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      +.+|++.+|.+||++.++++
T Consensus       250 i~~~l~~~p~~Rpt~~~il~  269 (286)
T cd06614         250 LNKCLVKDPEKRPSAEELLQ  269 (286)
T ss_pred             HHHHhccChhhCcCHHHHhh
Confidence            99999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.52  E-value=1.2e-14  Score=138.31  Aligned_cols=163  Identities=18%  Similarity=0.258  Sum_probs=119.7

Q ss_pred             cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCCCcc-----------------EE--Eee--CC---cEEE-------
Q 039505          165 RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQGHVP-----------------IV--ECH--VG---ALIT-------  211 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~~~~-----------------Lv--~c~--~~---~lv~-------  211 (342)
                      +.||+|.|+.|-.+++-- + .||||++.+...+....                 ++  |-.  ..   +|+.       
T Consensus        24 kTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELGD~GD  103 (864)
T KOG4717|consen   24 KTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGGD  103 (864)
T ss_pred             hhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEecCCch
Confidence            789999999999998754 3 99999998765443222                 23  111  11   3333       


Q ss_pred             -----E-----------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC---CccccCCCCCc-----ccccccc
Q 039505          212 -----I-----------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK---SRISPVEGGTH-----MSTTIAG  261 (342)
Q Consensus       212 -----m-----------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~---a~~~~~~~~~~-----~~~~~~G  261 (342)
                           |                 |..|+.|+|.   ..+|||||||+||.+-+.   .|+.++++...     .-++.||
T Consensus       104 l~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHq---LHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~TsCG  180 (864)
T KOG4717|consen  104 LFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQ---LHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTTSCG  180 (864)
T ss_pred             HHHHHHhhhccccHHHHHHHHHHHHHHHHHHhh---hhhhcccCCcceeEEeeecCceEeeeccccccCCCcchhhcccc
Confidence                 2                 8899999999   999999999999988877   56666666543     2245789


Q ss_pred             Ccceee---------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcc
Q 039505          262 TAGFLN---------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASV  314 (342)
Q Consensus       262 t~~y~a---------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl  314 (342)
                      +..|-|                           +|++||....+.+  .+  ..++|-..  ..+.....++.+|+..++
T Consensus       181 SLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSE--TL--TmImDCKY--tvPshvS~eCrdLI~sML  254 (864)
T KOG4717|consen  181 SLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSE--TL--TMIMDCKY--TVPSHVSKECRDLIQSML  254 (864)
T ss_pred             hhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchh--hh--hhhhcccc--cCchhhhHHHHHHHHHHH
Confidence            999988                           9999999877654  11  22444333  345667778999999999


Q ss_pred             cccCCCCCCHHHHH--HHHHhccC
Q 039505          315 SSKVNRRPLMNQVV--MVREQGNG  336 (342)
Q Consensus       315 ~~~P~~RPsm~eV~--~~L~~i~~  336 (342)
                      ..+|++|.+.+||+  .+|+.+.+
T Consensus       255 vRdPkkRAslEeI~s~~Wlq~~D~  278 (864)
T KOG4717|consen  255 VRDPKKRASLEEIVSTSWLQAGDR  278 (864)
T ss_pred             hcCchhhccHHHHhccccccCCCC
Confidence            99999999999998  46776654

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.52  E-value=3.3e-14  Score=130.22  Aligned_cols=156  Identities=25%  Similarity=0.302  Sum_probs=92.3

Q ss_pred             cCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC-------cc-----------EE----EeeCC---cEEE--E-----
Q 039505          167 PYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH-------VP-----------IV----ECHVG---ALIT--I-----  212 (342)
Q Consensus       167 lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~-------~~-----------Lv----~c~~~---~lv~--m-----  212 (342)
                      ||+|+||+||++.....  .+|+|.+........       .+           ++    .+...   ++++  +     
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            69999999999987644  999999865321110       01           22    22221   3333  1     


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCc--cccCCCCCc-----cccccccC
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSR--ISPVEGGTH-----MSTTIAGT  262 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~--~~~~~~~~~-----~~~~~~Gt  262 (342)
                                             ++.||.|||+   .+++||||||+||+++++..  +.+++....     ......++
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  157 (277)
T cd05577          81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQ---RRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGT  157 (277)
T ss_pred             HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCC
Confidence                                   8899999999   89999999999999998833  333221110     11113345


Q ss_pred             cceee--------------------------cCCCCcccccccc-cccccccccccccCCCCCChHHHHHHHHHHHHccc
Q 039505          263 AGFLN--------------------------TKNPVISKSIENG-NSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVS  315 (342)
Q Consensus       263 ~~y~a--------------------------tG~~P~~~~~~~~-~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~  315 (342)
                      ..|++                          +|+.|+....... ...+. .....  .....+......+.+++.+||+
T Consensus       158 ~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~li~~~l~  234 (277)
T cd05577         158 PGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELK-RRTLE--MAVEYPDKFSPEAKDLCEALLQ  234 (277)
T ss_pred             CCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHH-hcccc--ccccCCccCCHHHHHHHHHHcc
Confidence            55555                          7888876543211 00000 00000  0111122234457889999999


Q ss_pred             ccCCCCC-----CHHHHH
Q 039505          316 SKVNRRP-----LMNQVV  328 (342)
Q Consensus       316 ~~P~~RP-----sm~eV~  328 (342)
                      .+|++||     ++.+++
T Consensus       235 ~~p~~R~~~~~~~~~~ll  252 (277)
T cd05577         235 KDPEKRLGCRGGSADEVR  252 (277)
T ss_pred             CChhHccCCCcccHHHHH
Confidence            9999999     555565

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.52  E-value=1.6e-14  Score=143.97  Aligned_cols=52  Identities=25%  Similarity=0.325  Sum_probs=39.2

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-------cccccccCcceee
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-------MSTTIAGTAGFLN  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-------~~~~~~Gt~~y~a  267 (342)
                      ++.||+|||+   .+||||||||+|||++.+  .++.+++....       ......||..|+|
T Consensus       276 l~~aL~yLH~---~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~a  336 (501)
T PHA03210        276 LLCAVEYIHD---KKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNS  336 (501)
T ss_pred             HHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEEeCCCceecCcccccccccccCCcCCCC
Confidence            7899999999   999999999999999988  44444443211       1123568999988

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.52  E-value=2.5e-14  Score=129.59  Aligned_cols=109  Identities=18%  Similarity=0.241  Sum_probs=69.0

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC-CccccCCCCCc------cccccccCcceee------------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-SRISPVEGGTH------MSTTIAGTAGFLN------------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-a~~~~~~~~~~------~~~~~~Gt~~y~a------------------  267 (342)
                      +++||.|||+   .+++|+||||+||+++++ .++.+++....      ......|++.|+|                  
T Consensus       115 l~~~l~~lH~---~~i~h~~l~~~nili~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~sl  191 (260)
T cd08222         115 LLLGVHYMHQ---RRILHRDLKAKNIFLKNNLLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSL  191 (260)
T ss_pred             HHHHHHHHHH---cCccccCCChhheEeecCCEeecccCceeecCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHH
Confidence            8899999999   999999999999999876 44444332211      1122446666765                  


Q ss_pred             --------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          268 --------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       268 --------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                              +|+.|+.......   .. ....... ....+......+.+++.+||+.+|++||++.++++
T Consensus       192 G~~~~~l~~~~~~~~~~~~~~---~~-~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  256 (260)
T cd08222         192 GCILYEMCCLAHAFEGQNFLS---VV-LRIVEGP-TPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR  256 (260)
T ss_pred             HHHHHHHHhCCCCCCCccHHH---HH-HHHHcCC-CCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence                    5666654321110   00 1111111 11123344456889999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.52  E-value=9.8e-14  Score=126.12  Aligned_cols=160  Identities=17%  Similarity=0.224  Sum_probs=99.9

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCC--CCc-------c--------------EE-EeeCC-----c
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQ--GHV-------P--------------IV-ECHVG-----A  208 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~--~~~-------~--------------Lv-~c~~~-----~  208 (342)
                      +|.  +.||+|+||.||+|.....  .||+|.+......  ...       +              ++ ++...     .
T Consensus         3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~   82 (264)
T cd06653           3 NWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLS   82 (264)
T ss_pred             ceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEE
Confidence            455  8999999999999998654  9999987532111  111       0              22 33221     2


Q ss_pred             EEE--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc----
Q 039505          209 LIT--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH----  254 (342)
Q Consensus       209 lv~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~----  254 (342)
                      +++  +                          ++.||.|||+   .+++||||||+||+++.+.  ++.+++....    
T Consensus        83 ~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~  159 (264)
T cd06653          83 IFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTI  159 (264)
T ss_pred             EEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECccccccccccc
Confidence            232  1                          8899999999   8999999999999999873  3444332211    


Q ss_pred             -----cccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHH
Q 039505          255 -----MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISV  303 (342)
Q Consensus       255 -----~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~  303 (342)
                           ......|+..|+|                          ||+.|+.......  .+.  +..........+....
T Consensus       160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~--~~~~~~~~~~~p~~~~  235 (264)
T cd06653         160 CMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMA--AIF--KIATQPTKPMLPDGVS  235 (264)
T ss_pred             cccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHH--HHH--HHHcCCCCCCCCcccC
Confidence                 0112457777777                          7888876432111  111  1111111122233444


Q ss_pred             HHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          304 GKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       304 ~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ..+.+++..|++ +|..||+..+++.
T Consensus       236 ~~~~~~i~~~l~-~~~~r~~~~~~~~  260 (264)
T cd06653         236 DACRDFLKQIFV-EEKRRPTAEFLLR  260 (264)
T ss_pred             HHHHHHHHHHhc-CcccCccHHHHhc
Confidence            568889999999 5799999998764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.51  E-value=6.8e-15  Score=131.95  Aligned_cols=167  Identities=16%  Similarity=0.150  Sum_probs=112.5

Q ss_pred             HhhccC---cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc---------------EE-EeeC---C----cEE
Q 039505          159 VTNNFE---RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP---------------IV-ECHV---G----ALI  210 (342)
Q Consensus       159 at~~f~---~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~---------------Lv-~c~~---~----~lv  210 (342)
                      .|++|+   ++||-|-.|.|-.+..+.+  .+|+|++.... ..+++               ++ ...+   +    ++|
T Consensus        59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~-KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiV  137 (400)
T KOG0604|consen   59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSP-KARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIV  137 (400)
T ss_pred             chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCH-HHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEee
Confidence            566676   8999999999999999876  89999986543 22222               22 1111   1    222


Q ss_pred             E--E----------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-----CccccCCCCCcc
Q 039505          211 T--I----------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-----SRISPVEGGTHM  255 (342)
Q Consensus       211 ~--m----------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-----a~~~~~~~~~~~  255 (342)
                      .  |                            |+.|+.|||+   .+|.||||||+|+|....     .|+.++++....
T Consensus       138 mE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~---~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t  214 (400)
T KOG0604|consen  138 MECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHS---MNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKET  214 (400)
T ss_pred             eecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHh---cchhhccCChhheeeecCCCCcceEeccccccccc
Confidence            2  2                            8999999999   999999999999999876     466666665332


Q ss_pred             c-----cccccCcceee--------------------------cCCCCccccccccccccccccccc--ccCCCCCChHH
Q 039505          256 S-----TTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVD--LSFKGEFDIIS  302 (342)
Q Consensus       256 ~-----~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d--~~l~~~~~~~~  302 (342)
                      .     .+.+-|+.|+|                          +|-+||....+..+..-....+..  -.++.+.....
T Consensus       215 ~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~V  294 (400)
T KOG0604|consen  215 QEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCV  294 (400)
T ss_pred             CCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHH
Confidence            2     34788999998                          788887654332110000011111  11222223445


Q ss_pred             HHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          303 VGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       303 ~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      .+...+++...+..+|.+|.|+.+++.
T Consensus       295 Se~aKdlIR~LLkt~PteRlTI~~~m~  321 (400)
T KOG0604|consen  295 SEAAKDLIRKLLKTEPTERLTIEEVMD  321 (400)
T ss_pred             HHHHHHHHHHHhcCCchhheeHHHhhc
Confidence            666788999999999999999999874

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.51  E-value=1.9e-14  Score=140.45  Aligned_cols=155  Identities=17%  Similarity=0.169  Sum_probs=108.8

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc---------------EE-EeeCC---cEEE--E---------
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP---------------IV-ECHVG---ALIT--I---------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~---------------Lv-~c~~~---~lv~--m---------  212 (342)
                      ..+|.|+|+.|-++.+..+  ..+||++.....+..++               +. .|.++   ++|+  +         
T Consensus       328 ~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~ell~ri  407 (612)
T KOG0603|consen  328 EELGEGSFSAVKYCESSPTDQEPAVKIISKRADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGGELLRRI  407 (612)
T ss_pred             cccCCCCccceeeeeccccccchhheeccccccccccccchhhhhcCCCcceeecceecCCceeeeeehhccccHHHHHH
Confidence            6799999999999998766  89999998874443333               22 33333   3333  2         


Q ss_pred             ----------------ehhhhhhhhccCCCCeeeCCCCcceEEec-CC--CccccCCCCCcccc---ccccCcceee---
Q 039505          213 ----------------PKEGLEYLHQGLKHPIIQRDMKSTNILLN-EK--SRISPVEGGTHMST---TIAGTAGFLN---  267 (342)
Q Consensus       213 ----------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd-~~--a~~~~~~~~~~~~~---~~~Gt~~y~a---  267 (342)
                                      ++.|+.|||+   ++||||||||+|||++ +.  -++.++++......   +.+-|..|.|   
T Consensus       408 ~~~~~~~~e~~~w~~~lv~Av~~LH~---~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~tp~~t~~y~APEv  484 (612)
T KOG0603|consen  408 RSKPEFCSEASQWAAELVSAVDYLHE---QGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCDTPALTLQYVAPEV  484 (612)
T ss_pred             HhcchhHHHHHHHHHHHHHHHHHHHh---cCeeecCCChhheeecCCCCcEEEEEechhhhCchhhcccchhhcccChhh
Confidence                            7889999999   9999999999999996 33  45666665543322   3466777777   


Q ss_pred             -----------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCH
Q 039505          268 -----------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLM  324 (342)
Q Consensus       268 -----------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm  324 (342)
                                             ||+.|+.....+.       ++......+...........+|+.+|++.+|.+||+|
T Consensus       485 l~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~-------ei~~~i~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~  557 (612)
T KOG0603|consen  485 LAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGI-------EIHTRIQMPKFSECVSDEAKDLLQQLLQVDPALRLGA  557 (612)
T ss_pred             hccCCCCcchhhHHHHHHHHHHHhCCCccccCCchH-------HHHHhhcCCccccccCHHHHHHHHHhccCChhhCcCh
Confidence                                   8888887655442       1111112222334445668889999999999999999


Q ss_pred             HHHHH
Q 039505          325 NQVVM  329 (342)
Q Consensus       325 ~eV~~  329 (342)
                      .++..
T Consensus       558 ~~i~~  562 (612)
T KOG0603|consen  558 DEIGA  562 (612)
T ss_pred             hhhcc
Confidence            99863

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.51  E-value=2.1e-14  Score=130.92  Aligned_cols=156  Identities=22%  Similarity=0.245  Sum_probs=95.3

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc---c----------------EE----EeeCC---cEEE--E--
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV---P----------------IV----ECHVG---ALIT--I--  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~---~----------------Lv----~c~~~---~lv~--m--  212 (342)
                      +.||+|+||.||+|....+  .||+|++.........   .                ++    .+..+   ++++  +  
T Consensus         7 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~   86 (280)
T cd05581           7 KIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPN   86 (280)
T ss_pred             eeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCCCC
Confidence            7899999999999998754  9999998753211100   0                11    11111   2222  1  


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCc--cccCCCCCc------------
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSR--ISPVEGGTH------------  254 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~--~~~~~~~~~------------  254 (342)
                                              ++.||+|||+   .+++|+||||+||+++.+.+  +.+++....            
T Consensus        87 ~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~---~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~  163 (280)
T cd05581          87 GELLQYIRKYGSLDEKCTRFYAAEILLALEYLHS---KGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKG  163 (280)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEecCCccccccCCccccccCCC
Confidence                                    8999999999   99999999999999998733  322221110            


Q ss_pred             --------------cccccccCcceee--------------------------cCCCCcccccccccccccccccccccC
Q 039505          255 --------------MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSF  294 (342)
Q Consensus       255 --------------~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l  294 (342)
                                    ......|+..|++                          +|+.|+.......  .+  ..+.+  .
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~--~~~~~--~  237 (280)
T cd05581         164 DATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL--TF--QKILK--L  237 (280)
T ss_pred             CCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH--HH--HHHHh--c
Confidence                          0112345666766                          6777765432111  00  00111  1


Q ss_pred             CCCCChHHHHHHHHHHHHcccccCCCCCCH----HHHHH
Q 039505          295 KGEFDIISVGKAVEIAMASVSSKVNRRPLM----NQVVM  329 (342)
Q Consensus       295 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm----~eV~~  329 (342)
                      ....+......+.+++.+||+.+|++||++    .+++.
T Consensus       238 ~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~  276 (280)
T cd05581         238 EYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA  276 (280)
T ss_pred             CCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence            111222234568899999999999999999    66653

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.51  E-value=9.4e-15  Score=143.82  Aligned_cols=111  Identities=25%  Similarity=0.314  Sum_probs=81.6

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc-------------------------------------EE--E
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP-------------------------------------IV--E  203 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~-------------------------------------Lv--~  203 (342)
                      +.||+|+||.||+|+.+.+  .||||.++........+                                     ++  |
T Consensus        19 e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEy   98 (732)
T KOG4250|consen   19 ERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEY   98 (732)
T ss_pred             hhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEee
Confidence            7899999999999997655  99999998754222221                                     22  7


Q ss_pred             eeCC-cEEEE--------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC------CccccCCCCCc--
Q 039505          204 CHVG-ALITI--------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK------SRISPVEGGTH--  254 (342)
Q Consensus       204 c~~~-~lv~m--------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~------a~~~~~~~~~~--  254 (342)
                      |.++ +.-+|                    ++.||.|||+   .+|+||||||.||++-..      .|+.+++.+..  
T Consensus        99 C~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrE---n~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~  175 (732)
T KOG4250|consen   99 CSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRE---NGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELD  175 (732)
T ss_pred             cCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHH---cCceeccCCCCcEEEeecCCCceEEeeecccccccCC
Confidence            7666 11111                    8899999998   999999999999987643      45555543322  


Q ss_pred             ---cccccccCcceee---------------------------cCCCCcccccc
Q 039505          255 ---MSTTIAGTAGFLN---------------------------TKNPVISKSIE  278 (342)
Q Consensus       255 ---~~~~~~Gt~~y~a---------------------------tG~~P~~~~~~  278 (342)
                         ...+++||..|.+                           ||..||.....
T Consensus       176 d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~  229 (732)
T KOG4250|consen  176 DNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGG  229 (732)
T ss_pred             CCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCC
Confidence               3456889999987                           99999987543

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.50  E-value=3.4e-14  Score=133.46  Aligned_cols=169  Identities=18%  Similarity=0.166  Sum_probs=100.1

Q ss_pred             cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCCC--cc---------------E---E-EeeC-------C-cEEE--
Q 039505          165 RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQGH--VP---------------I---V-ECHV-------G-ALIT--  211 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~~--~~---------------L---v-~c~~-------~-~lv~--  211 (342)
                      +.||+|+||.||+|.... + .||||++........  +.               +   . ++..       . ++++  
T Consensus         6 ~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~   85 (330)
T cd07834           6 KPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTEL   85 (330)
T ss_pred             eeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEecc
Confidence            789999999999999875 3 999999876432111  01               1   1 2111       1 2222  


Q ss_pred             E-------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCc--cccCCCCCcc---------
Q 039505          212 I-------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSR--ISPVEGGTHM---------  255 (342)
Q Consensus       212 m-------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~--~~~~~~~~~~---------  255 (342)
                      +                         +++||+|||+   .+|+||||||+|||++++.+  +.+++.....         
T Consensus        86 ~~~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~---~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~  162 (330)
T cd07834          86 METDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHS---ANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGF  162 (330)
T ss_pred             hhhhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccCceEeeccccccccc
Confidence            1                         8899999999   99999999999999998833  3332211110         


Q ss_pred             ccccccCcceee---------------------------cCCCCcccccccc-cccccc------------------ccc
Q 039505          256 STTIAGTAGFLN---------------------------TKNPVISKSIENG-NSHLRD------------------KST  289 (342)
Q Consensus       256 ~~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~-~~~l~~------------------~~~  289 (342)
                      .....++..|+|                           ||+.|+....... ...+..                  .+.
T Consensus       163 ~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  242 (330)
T cd07834         163 LTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNY  242 (330)
T ss_pred             ccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhH
Confidence            112335555555                           7777775432110 000000                  000


Q ss_pred             cc---ccCC---CCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHH--HHhccC
Q 039505          290 VD---LSFK---GEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMV--REQGNG  336 (342)
Q Consensus       290 ~d---~~l~---~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~--L~~i~~  336 (342)
                      +.   ....   ..........+.+++.+||+.+|++||++.+++..  ++.++.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~  297 (330)
T cd07834         243 LKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD  297 (330)
T ss_pred             HhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence            00   0000   00011124557899999999999999999999863  555543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.50  E-value=1.6e-14  Score=136.94  Aligned_cols=168  Identities=20%  Similarity=0.208  Sum_probs=100.0

Q ss_pred             HhhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC------cc-----------E---E--EeeCC-----
Q 039505          159 VTNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH------VP-----------I---V--ECHVG-----  207 (342)
Q Consensus       159 at~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~------~~-----------L---v--~c~~~-----  207 (342)
                      ..++|.  +.||+|+||.||+|....+  .||||++........      .+           +   .  +....     
T Consensus        13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07851          13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF   92 (343)
T ss_pred             ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence            345666  8999999999999998754  999999865321111      01           1   1  11100     


Q ss_pred             ---cEEE--E------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCc--cccCCCCCcc-
Q 039505          208 ---ALIT--I------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSR--ISPVEGGTHM-  255 (342)
Q Consensus       208 ---~lv~--m------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~--~~~~~~~~~~-  255 (342)
                         ++++  +                        +++||+|||+   .+|+||||||+||+++++.+  +.+++..... 
T Consensus        93 ~~~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~  169 (343)
T cd07851          93 QDVYLVTHLMGADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHS---AGIIHRDLKPSNIAVNEDCELKILDFGLARHTD  169 (343)
T ss_pred             ccEEEEEecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEcccccccccc
Confidence               1222  1                        8899999999   89999999999999998843  3333222111 


Q ss_pred             --ccccccCcceee---------------------------cCCCCcccccccc-cccccc-c-----c-----------
Q 039505          256 --STTIAGTAGFLN---------------------------TKNPVISKSIENG-NSHLRD-K-----S-----------  288 (342)
Q Consensus       256 --~~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~-~~~l~~-~-----~-----------  288 (342)
                        .....++..|+|                           ||+.|+....... ...+.+ .     .           
T Consensus       170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  249 (343)
T cd07851         170 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESAR  249 (343)
T ss_pred             ccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHH
Confidence              112345555655                           7888875432110 000000 0     0           


Q ss_pred             -cccc--cC-CCC---CChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          289 -TVDL--SF-KGE---FDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       289 -~~d~--~l-~~~---~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                       .+..  .. ...   ........+.+++.+|++.+|++|||+.+|+.
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~  297 (343)
T cd07851         250 NYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA  297 (343)
T ss_pred             HHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence             0000  00 000   00112456889999999999999999999875

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.49  E-value=2.8e-14  Score=138.61  Aligned_cols=154  Identities=19%  Similarity=0.244  Sum_probs=106.7

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc--------------------EE--------------EeeCC-
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP--------------------IV--------------ECHVG-  207 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~--------------------Lv--------------~c~~~-  207 (342)
                      ..||+|.|++|..|++..+  .||||.+++........                    |+              ||..+ 
T Consensus        62 ~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~eya~~ge  141 (596)
T KOG0586|consen   62 KTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEYASGGE  141 (596)
T ss_pred             eeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEeccCch
Confidence            8999999999999998766  99999998876544321                    22              33222 


Q ss_pred             cEEE------E-----------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-----cccccccCc
Q 039505          208 ALIT------I-----------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-----MSTTIAGTA  263 (342)
Q Consensus       208 ~lv~------m-----------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-----~~~~~~Gt~  263 (342)
                      ...|      |           +.+|++|||+   +.|+|||||.+||||+.+  -++.++++++.     ...+.+|++
T Consensus       142 ~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~---k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~lqt~cgsp  218 (596)
T KOG0586|consen  142 LFDYLVKHGRMKEKEARAKFRQIVSAVEYCHS---KNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGLMLQTFCGSP  218 (596)
T ss_pred             hHHHHHhcccchhhhhhhhhHHHHHHHHHHhh---cceeccccchhhcccccccceeeeccccceeecccccccccCCCC
Confidence            1111      1           8899999999   999999999999999998  56666666543     234579999


Q ss_pred             ceee---------------------------cCCCCcccccccccccccccccccccCCCC--CChHHHHHHHHHHHHcc
Q 039505          264 GFLN---------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGE--FDIISVGKAVEIAMASV  314 (342)
Q Consensus       264 ~y~a---------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~--~~~~~~~~l~~l~~~Cl  314 (342)
                      .|.|                           .|..||++..-..        .-++.+.+.  .+.-...++.+++.+.+
T Consensus       219 pyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~--------Lr~rvl~gk~rIp~~ms~dce~lLrk~l  290 (596)
T KOG0586|consen  219 PYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKE--------LRPRVLRGKYRIPFYMSCDCEDLLRKFL  290 (596)
T ss_pred             CccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccccc--------ccchheeeeecccceeechhHHHHHHhh
Confidence            9999                           6666666532111        111111111  11222334677888888


Q ss_pred             cccCCCCCCHHHHHH
Q 039505          315 SSKVNRRPLMNQVVM  329 (342)
Q Consensus       315 ~~~P~~RPsm~eV~~  329 (342)
                      -.+|.+|+++.++..
T Consensus       291 vl~Pskr~~~dqim~  305 (596)
T KOG0586|consen  291 VLNPSKRGPCDQIMK  305 (596)
T ss_pred             ccCccccCCHHHhhh
Confidence            999999999999864

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.49  E-value=8e-14  Score=129.94  Aligned_cols=28  Identities=32%  Similarity=0.627  Sum_probs=26.8

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK  243 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~  243 (342)
                      +++||+|||+   .+|+||||||+||+++.+
T Consensus       110 l~~~L~~LH~---~~ivH~dlk~~Nili~~~  137 (314)
T cd08216         110 VLNALDYIHS---KGFIHRSVKASHILLSGD  137 (314)
T ss_pred             HHHHHHHHHH---CCeecCCCCcceEEEecC
Confidence            8999999999   899999999999999986

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.48  E-value=1.3e-13  Score=125.99  Aligned_cols=76  Identities=29%  Similarity=0.439  Sum_probs=56.5

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc------c--------------EE-EeeCC---cEEE--E----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV------P--------------IV-ECHVG---ALIT--I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~------~--------------Lv-~c~~~---~lv~--m----  212 (342)
                      +.||+|+||.||+|.....  .+|+|++.........      +              +. ++...   ++++  +    
T Consensus         5 ~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~l   84 (282)
T cd07829           5 EKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCDMDL   84 (282)
T ss_pred             hcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcCcCH
Confidence            6799999999999998764  9999999875421110      0              11 11111   2333  1    


Q ss_pred             ----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC
Q 039505          213 ----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK  243 (342)
Q Consensus       213 ----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~  243 (342)
                                            +++||+|||+   .+|+||||+|+||+++++
T Consensus        85 ~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~~l~~~ni~~~~~  134 (282)
T cd07829          85 KKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHS---HRILHRDLKPQNILINRD  134 (282)
T ss_pred             HHHHHhhccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChheEEEcCC
Confidence                                  8899999999   899999999999999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.47  E-value=7.8e-14  Score=125.20  Aligned_cols=151  Identities=21%  Similarity=0.211  Sum_probs=93.8

Q ss_pred             cCcCCCeeEEEEEECC-C-eEEEEEccCCCCCCCcc---------------------EE-EeeCC---cEEE--E-----
Q 039505          167 PYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQGHVP---------------------IV-ECHVG---ALIT--I-----  212 (342)
Q Consensus       167 lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~~~~---------------------Lv-~c~~~---~lv~--m-----  212 (342)
                      ||+|+||.||++.... + .+|+|.+..........                     ++ .+..+   ++++  +     
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            6999999999999875 3 99999987654321110                     11 11111   2222  1     


Q ss_pred             ---------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc------cccccccCc
Q 039505          213 ---------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH------MSTTIAGTA  263 (342)
Q Consensus       213 ---------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~------~~~~~~Gt~  263 (342)
                                           +++||.|||+   .+++|+||||+||+++.+.  ++.+++....      ......++.
T Consensus        81 ~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~---~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~  157 (250)
T cd05123          81 FSHLSKEGRFSEERARFYAAEIVLALEYLHS---LGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTP  157 (250)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCc
Confidence                                 8999999999   9999999999999999883  3333322211      112245666


Q ss_pred             ceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHccccc
Q 039505          264 GFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSK  317 (342)
Q Consensus       264 ~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~  317 (342)
                      .|++                          +|+.|+.......   +. ..+....  ...+......+.+++.+||..+
T Consensus       158 ~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~---~~-~~~~~~~--~~~~~~~~~~l~~~i~~~l~~~  231 (250)
T cd05123         158 EYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKE---IY-EKILKDP--LRFPEFLSPEARDLISGLLQKD  231 (250)
T ss_pred             cccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH---HH-HHHhcCC--CCCCCCCCHHHHHHHHHHhcCC
Confidence            6665                          7777775433211   00 1111111  1122223456789999999999


Q ss_pred             CCCCCCHHH
Q 039505          318 VNRRPLMNQ  326 (342)
Q Consensus       318 P~~RPsm~e  326 (342)
                      |++||++.+
T Consensus       232 p~~R~~~~~  240 (250)
T cd05123         232 PTKRLGSGG  240 (250)
T ss_pred             HhhCCCccc
Confidence            999999954

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.47  E-value=7.1e-14  Score=132.41  Aligned_cols=76  Identities=24%  Similarity=0.330  Sum_probs=55.6

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc---------------EE----EeeC---------------C-
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP---------------IV----ECHV---------------G-  207 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~---------------Lv----~c~~---------------~-  207 (342)
                      +.||+|+||.||+|....+  .||+|++........+.               ++    ++..               . 
T Consensus        11 ~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (342)
T cd07854          11 RPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNS   90 (342)
T ss_pred             EEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccccccce
Confidence            8899999999999998654  99999986654322111               22    1110               0 


Q ss_pred             -cEEE--E------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC
Q 039505          208 -ALIT--I------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK  243 (342)
Q Consensus       208 -~lv~--m------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~  243 (342)
                       ++++  +                        +++||.|||+   .+|+||||||+||+++.+
T Consensus        91 ~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~givH~dikp~Nili~~~  150 (342)
T cd07854          91 VYIVQEYMETDLANVLEQGPLSEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANVFINTE  150 (342)
T ss_pred             EEEEeecccccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCC
Confidence             1222  1                        8999999999   899999999999999854

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.47  E-value=9.7e-14  Score=124.46  Aligned_cols=143  Identities=15%  Similarity=0.074  Sum_probs=85.5

Q ss_pred             CCCeeEEEEEECCC--eEEEEEccCCCCCCCcc----------EE----EeeCC---cEEE--E----------------
Q 039505          170 GGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP----------IV----ECHVG---ALIT--I----------------  212 (342)
Q Consensus       170 G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~----------Lv----~c~~~---~lv~--m----------------  212 (342)
                      |.||.||+++...+  .+|+|++..........          ++    ++.+.   ++++  +                
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~   83 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSSEYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFLNIP   83 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchhhhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHhcCCC
Confidence            89999999998755  89999997653221111          11    11111   2222  1                


Q ss_pred             ----------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc---cccccccCcceee----------
Q 039505          213 ----------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH---MSTTIAGTAGFLN----------  267 (342)
Q Consensus       213 ----------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~---~~~~~~Gt~~y~a----------  267 (342)
                                +++||+|||+   .+|+||||||+||+++++  .++.+++....   ......++..|+|          
T Consensus        84 ~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  160 (237)
T cd05576          84 EECVKRWAAEMVVALDALHR---EGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGGISEET  160 (237)
T ss_pred             HHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCcccCCCCCC
Confidence                      7899999999   999999999999999988  33333322111   1112334555666          


Q ss_pred             ----------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHH
Q 039505          268 ----------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMN  325 (342)
Q Consensus       268 ----------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~  325 (342)
                                      +|+.|+.......          ........+......+.+++.+|++.+|++||++.
T Consensus       161 ~~~DvwslG~il~el~~g~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~  224 (237)
T cd05576         161 EACDWWSLGAILFELLTGKTLVECHPSGI----------NTHTTLNIPEWVSEEARSLLQQLLQFNPTERLGAG  224 (237)
T ss_pred             chhhHHHHHHHHHHHHHCcchhhcCchhc----------ccccccCCcccCCHHHHHHHHHHccCCHHHhcCCC
Confidence                            4444332211100          00000011222345578899999999999999973

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.45  E-value=8.3e-14  Score=136.82  Aligned_cols=159  Identities=13%  Similarity=0.117  Sum_probs=104.9

Q ss_pred             cccCcCCCeeEEEEEECC--C---eEEEEEccCCCCCCCcc----------------EE--E--eeCC--cEEE-E----
Q 039505          165 RVPYKGGFITVYHGQLVK--S---EVAMKMLSPSSSQGHVP----------------IV--E--CHVG--ALIT-I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~--~---~vAVK~l~~~~~~~~~~----------------Lv--~--c~~~--~lv~-m----  212 (342)
                      ++||+|.||.|++|.|..  +   .||||.+..........                |+  |  ..+.  .+|+ +    
T Consensus       116 e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~qp~mMV~ELaplG  195 (1039)
T KOG0199|consen  116 ELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQPAMMVFELAPLG  195 (1039)
T ss_pred             HHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccchhhHHhhhcccc
Confidence            789999999999999853  3   89999998765442111                22  1  1111  2222 1    


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCccccc-------
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHMSTT-------  258 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~~~~-------  258 (342)
                                               ||.||.||.+   ++.|||||-..|+||...  .|+.+++........       
T Consensus       196 SLldrLrka~~~~llv~~Lcdya~QiA~aM~YLes---krlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~  272 (1039)
T KOG0199|consen  196 SLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLES---KRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMA  272 (1039)
T ss_pred             hHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhhhheecccceeeeecccceeccCCCCcceEec
Confidence                                     9999999999   999999999999999876  556655443221110       


Q ss_pred             --cccCcceee---------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHH
Q 039505          259 --IAGTAGFLN---------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEI  309 (342)
Q Consensus       259 --~~Gt~~y~a---------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l  309 (342)
                        ..--+.|.|                           .|..|+.+.....+     .+.+|..-.-..+..|.+.+.++
T Consensus       273 p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qI-----L~~iD~~erLpRPk~csedIY~i  347 (1039)
T KOG0199|consen  273 PQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQI-----LKNIDAGERLPRPKYCSEDIYQI  347 (1039)
T ss_pred             CCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHH-----HHhccccccCCCCCCChHHHHHH
Confidence              011122333                           45555544332211     33444333344577889999999


Q ss_pred             HHHcccccCCCCCCHHHHHHHH
Q 039505          310 AMASVSSKVNRRPLMNQVVMVR  331 (342)
Q Consensus       310 ~~~Cl~~~P~~RPsm~eV~~~L  331 (342)
                      +..||..+|++|||+..+.+.+
T Consensus       348 mk~cWah~paDRptFsair~~~  369 (1039)
T KOG0199|consen  348 MKNCWAHNPADRPTFSAIREDL  369 (1039)
T ss_pred             HHHhccCCccccccHHHHHHhH
Confidence            9999999999999999997443

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.45  E-value=6.7e-15  Score=139.90  Aligned_cols=152  Identities=23%  Similarity=0.266  Sum_probs=104.9

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc---------EE-EeeCC------------cEEE--E------
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP---------IV-ECHVG------------ALIT--I------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~---------Lv-~c~~~------------~lv~--m------  212 (342)
                      ..||-|+||.|-.......  .+|+|++++...-+.+.         ++ -|...            -.||  |      
T Consensus       426 aTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClGG  505 (732)
T KOG0614|consen  426 ATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLGG  505 (732)
T ss_pred             hhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcCc
Confidence            4689999999999988766  58999998764322221         22 12121            2223  1      


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCC-----ccccccccC
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGT-----HMSTTIAGT  262 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~-----~~~~~~~Gt  262 (342)
                                             +.+|++|||+   ++||.|||||+|.|||.+  .|++++++..     ..+.++|||
T Consensus       506 ElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~---k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTwTFcGT  582 (732)
T KOG0614|consen  506 ELWTILRDRGSFDDYTARFYVACVLEAFEYLHR---KGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTWTFCGT  582 (732)
T ss_pred             hhhhhhhhcCCcccchhhhhHHHHHHHHHHHHh---cCceeccCChhheeeccCCceEEeehhhHHHhccCCceeeecCC
Confidence                                   8899999999   999999999999999999  7888777652     244568999


Q ss_pred             cceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccc
Q 039505          263 AGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSS  316 (342)
Q Consensus       263 ~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~  316 (342)
                      +.|+|                          ||++||.........+++ ..-+|.   -+++....+...+++.+.+..
T Consensus       583 pEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~I-LkGid~---i~~Pr~I~k~a~~Lik~LCr~  658 (732)
T KOG0614|consen  583 PEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLI-LKGIDK---IEFPRRITKTATDLIKKLCRD  658 (732)
T ss_pred             cccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHH-Hhhhhh---hhcccccchhHHHHHHHHHhc
Confidence            99999                          999999976543311111 111111   123344455577788888889


Q ss_pred             cCCCCCC
Q 039505          317 KVNRRPL  323 (342)
Q Consensus       317 ~P~~RPs  323 (342)
                      +|.+|-.
T Consensus       659 ~P~ERLG  665 (732)
T KOG0614|consen  659 NPTERLG  665 (732)
T ss_pred             CcHhhhc
Confidence            9999965

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.44  E-value=2.3e-13  Score=134.64  Aligned_cols=52  Identities=23%  Similarity=0.281  Sum_probs=36.6

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc-----cc--ccccCcceee
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM-----ST--TIAGTAGFLN  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~-----~~--~~~Gt~~y~a  267 (342)
                      +++||.|||+   .+|+||||||+|||++.+  .++.+++.....     ..  ...+|+.|+|
T Consensus       318 l~~aL~~lH~---~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~a  378 (507)
T PLN03224        318 VLTGLRKLHR---IGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSP  378 (507)
T ss_pred             HHHHHHHHHH---CCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeC
Confidence            6679999999   899999999999999987  444444332111     01  1234678888

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.43  E-value=9.1e-14  Score=126.43  Aligned_cols=158  Identities=21%  Similarity=0.268  Sum_probs=103.6

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc-------------------EE---------------
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP-------------------IV---------------  202 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~-------------------Lv---------------  202 (342)
                      ++|.  ++||+|+|++|..+++..+  .+|+|++++.-..+.+.                   |+               
T Consensus       250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffv  329 (593)
T KOG0695|consen  250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFV  329 (593)
T ss_pred             ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEE
Confidence            4566  8999999999999999877  89999998764332222                   22               


Q ss_pred             --EeeCCcEEE-E-----------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCccccCCC--------CCc
Q 039505          203 --ECHVGALIT-I-----------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEG--------GTH  254 (342)
Q Consensus       203 --~c~~~~lv~-m-----------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~~~~~~~--------~~~  254 (342)
                        |..++-|.| |                 |+-||.|||+   ++||.||||..|+|||..+.+...+.        ...
T Consensus       330 ieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~---rgiiyrdlkldnvlldaeghikltdygmcke~l~~gd  406 (593)
T KOG0695|consen  330 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGD  406 (593)
T ss_pred             EEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhh---cCeeeeeccccceEEccCCceeecccchhhcCCCCCc
Confidence              333333333 3                 8889999999   99999999999999999844332221        123


Q ss_pred             cccccccCcceee--------------------------cCCCCcccccc-cccccccc---cccccccCCCCCChHHHH
Q 039505          255 MSTTIAGTAGFLN--------------------------TKNPVISKSIE-NGNSHLRD---KSTVDLSFKGEFDIISVG  304 (342)
Q Consensus       255 ~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~-~~~~~l~~---~~~~d~~l~~~~~~~~~~  304 (342)
                      .+++++||+.|+|                          .|+.||+.... +...+.-+   .-++...++  .+.....
T Consensus       407 ~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqir--iprslsv  484 (593)
T KOG0695|consen  407 TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIR--IPRSLSV  484 (593)
T ss_pred             ccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhccc--ccceeeh
Confidence            4567899999999                          89999986431 11001111   122222221  1223334


Q ss_pred             HHHHHHHHcccccCCCCCC
Q 039505          305 KAVEIAMASVSSKVNRRPL  323 (342)
Q Consensus       305 ~l~~l~~~Cl~~~P~~RPs  323 (342)
                      +...+...-+.+||.+|..
T Consensus       485 kas~vlkgflnkdp~erlg  503 (593)
T KOG0695|consen  485 KASHVLKGFLNKDPKERLG  503 (593)
T ss_pred             hhHHHHHHhhcCCcHHhcC
Confidence            4556666778899999843

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.43  E-value=1.8e-13  Score=133.93  Aligned_cols=159  Identities=19%  Similarity=0.250  Sum_probs=102.1

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc-------------------------------EE-EeeCC--c
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP-------------------------------IV-ECHVG--A  208 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~-------------------------------Lv-~c~~~--~  208 (342)
                      ..+|+|.||.|||++....  ..|||+++........-                               -+ ||.++  .
T Consensus        21 qrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEycgggslQ  100 (829)
T KOG0576|consen   21 QRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCGGGSLQ  100 (829)
T ss_pred             eeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecCCCccc
Confidence            7899999999999998755  89999998764332221                               23 77766  2


Q ss_pred             EEE---E-------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc------ccccccCcc
Q 039505          209 LIT---I-------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM------STTIAGTAG  264 (342)
Q Consensus       209 lv~---m-------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~------~~~~~Gt~~  264 (342)
                      -+|   +             ..+||+|||+   .+-+|||||-.|||+++.  .++.+++.....      ...+.||+.
T Consensus       101 diy~~TgplselqiayvcRetl~gl~ylhs---~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~KrksfiGtpy  177 (829)
T KOG0576|consen  101 DIYHVTGPLSELQIAYVCRETLQGLKYLHS---QGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKSFIGTPY  177 (829)
T ss_pred             ceeeecccchhHHHHHHHhhhhccchhhhc---CCcccccccccceeecccCceeecccCchhhhhhhhhhhhcccCCcc
Confidence            333   2             7789999999   999999999999999988  444454443332      234789999


Q ss_pred             eee--------------------cCCCCcccccccc-cccccc--------cccccc-cCCCCCChHHHHHHHHHHHHcc
Q 039505          265 FLN--------------------TKNPVISKSIENG-NSHLRD--------KSTVDL-SFKGEFDIISVGKAVEIAMASV  314 (342)
Q Consensus       265 y~a--------------------tG~~P~~~~~~~~-~~~l~~--------~~~~d~-~l~~~~~~~~~~~l~~l~~~Cl  314 (342)
                      |||                    +|-..++...-.. ..++..        ....+| .+..  .......+.+++..|+
T Consensus       178 wmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkD--k~kws~~fh~fvK~al  255 (829)
T KOG0576|consen  178 WMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKD--KTKWSEFFHNFVKGAL  255 (829)
T ss_pred             ccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccC--CccchHHHHHHHHHHh
Confidence            999                    2222221110000 000000        112222 2211  1223445788888999


Q ss_pred             cccCCCCCCHHHHH
Q 039505          315 SSKVNRRPLMNQVV  328 (342)
Q Consensus       315 ~~~P~~RPsm~eV~  328 (342)
                      .++|++||++...+
T Consensus       256 tknpKkRptaeklL  269 (829)
T KOG0576|consen  256 TKNPKKRPTAEKLL  269 (829)
T ss_pred             cCCCccCCChhhhe
Confidence            99999999987643

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.42  E-value=3.1e-14  Score=146.02  Aligned_cols=111  Identities=26%  Similarity=0.309  Sum_probs=78.1

Q ss_pred             HHHHHHhhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCC------Cc-c----------------------
Q 039505          154 ELSLRVTNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQG------HV-P----------------------  200 (342)
Q Consensus       154 ~~l~~at~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~------~~-~----------------------  200 (342)
                      .++.--.++|.  .+||+|+||.|...+++.+  .+|+|++++..--.      .. +                      
T Consensus        68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~  147 (1317)
T KOG0612|consen   68 KELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDE  147 (1317)
T ss_pred             HHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc
Confidence            34444557787  9999999999999999877  89999998732110      00 1                      


Q ss_pred             ----EE--EeeCCcEEE-E-----------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCccccCCCC----
Q 039505          201 ----IV--ECHVGALIT-I-----------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGG----  252 (342)
Q Consensus       201 ----Lv--~c~~~~lv~-m-----------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~~~~~~~~----  252 (342)
                          +|  |..+|-|+- |                 +..||+-||+   .|.|||||||.|||||.++.+...+++    
T Consensus       148 ~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~---mgyVHRDiKPDNvLld~~GHikLADFGsClk  224 (1317)
T KOG0612|consen  148 RYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHS---MGYVHRDIKPDNVLLDKSGHIKLADFGSCLK  224 (1317)
T ss_pred             cceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHh---ccceeccCCcceeEecccCcEeeccchhHHh
Confidence                11  333330000 0                 7779999999   999999999999999998544444443    


Q ss_pred             -----CccccccccCcceee
Q 039505          253 -----THMSTTIAGTAGFLN  267 (342)
Q Consensus       253 -----~~~~~~~~Gt~~y~a  267 (342)
                           ...+...+|||-|++
T Consensus       225 m~~dG~V~s~~aVGTPDYIS  244 (1317)
T KOG0612|consen  225 MDADGTVRSSVAVGTPDYIS  244 (1317)
T ss_pred             cCCCCcEEeccccCCCCccC
Confidence                 334455789999998

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.40  E-value=7.6e-14  Score=130.93  Aligned_cols=161  Identities=20%  Similarity=0.247  Sum_probs=101.5

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCC--CCCCCcc-------------------------------------EE-
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPS--SSQGHVP-------------------------------------IV-  202 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~--~~~~~~~-------------------------------------Lv-  202 (342)
                      ++||+|||+.|||+..-..  .||||+-...  ..+..++                                     ++ 
T Consensus       469 hLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFCTVLE  548 (775)
T KOG1151|consen  469 HLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLE  548 (775)
T ss_pred             HHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccceeeee
Confidence            6899999999999986544  8999985433  2222222                                     45 


Q ss_pred             EeeCCcEEE-------E-----------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-------------CccccCCC
Q 039505          203 ECHVGALIT-------I-----------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-------------SRISPVEG  251 (342)
Q Consensus       203 ~c~~~~lv~-------m-----------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-------------a~~~~~~~  251 (342)
                      ||.+.-|.|       |           |..||.||.+ ..+||||-||||.||||-+.             +++++.+.
T Consensus       549 YceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNE-ikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddS  627 (775)
T KOG1151|consen  549 YCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNE-IKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDS  627 (775)
T ss_pred             ecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhc-cCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCc
Confidence            777662222       2           8899999997 56899999999999998765             34444322


Q ss_pred             CC-----ccccccccCcceee------------------------------cCCCCcccccccccccccc-ccccccc-C
Q 039505          252 GT-----HMSTTIAGTAGFLN------------------------------TKNPVISKSIENGNSHLRD-KSTVDLS-F  294 (342)
Q Consensus       252 ~~-----~~~~~~~Gt~~y~a------------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~-l  294 (342)
                      ..     ..+....||.+|++                              .|+.||.......  ++.+ ..++... +
T Consensus       628 y~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQ--dILqeNTIlkAtEV  705 (775)
T KOG1151|consen  628 YNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQ--DILQENTILKATEV  705 (775)
T ss_pred             cCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHH--HHHhhhchhcceec
Confidence            22     12344789999998                              6777776543222  2222 1111100 0


Q ss_pred             CCCCChHHHHHHHHHHHHcccccCCCCCCHHHHH
Q 039505          295 KGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVV  328 (342)
Q Consensus       295 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~  328 (342)
                      .-+..+....+...++.+|++..-++|....++.
T Consensus       706 qFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA  739 (775)
T KOG1151|consen  706 QFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLA  739 (775)
T ss_pred             cCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence            0011112233466788899999988888777765

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.40  E-value=1.2e-13  Score=127.81  Aligned_cols=115  Identities=10%  Similarity=0.164  Sum_probs=77.4

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCCCccccCCC--CCc--------cccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEG--GTH--------MSTTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~~~~~~~--~~~--------~~~~~~Gt~~y~a---------------  267 (342)
                      ++.|++|||+   ++|||.||-..|.+||+.-++...+.  +..        ....-.....||+               
T Consensus       405 la~am~hlh~---~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDv  481 (563)
T KOG1024|consen  405 LAMAMEHLHN---HGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDV  481 (563)
T ss_pred             HHHHHHHHHh---cCcccchhhhhcceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhh
Confidence            8899999999   99999999999999999822222111  111        1111122344555               


Q ss_pred             ------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhcc
Q 039505          268 ------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       268 ------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                                  .|+.|+.+....+..+     .+....+-..+.+|+.++..++..||...|++||+++|++..|.+..
T Consensus       482 WsfGVllWELmtlg~~PyaeIDPfEm~~-----ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~  556 (563)
T KOG1024|consen  482 WSFGVLLWELMTLGKLPYAEIDPFEMEH-----YLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFH  556 (563)
T ss_pred             HHHHHHHHHHHhcCCCCccccCHHHHHH-----HHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence                        6888876543222111     11111222346678889999999999999999999999999998764

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.38  E-value=1.1e-12  Score=133.33  Aligned_cols=163  Identities=19%  Similarity=0.236  Sum_probs=111.0

Q ss_pred             cccCcCCCeeEEEEEEC----C----C-eEEEEEccCCCCCCCcc--------------------EE-------------
Q 039505          165 RVPYKGGFITVYHGQLV----K----S-EVAMKMLSPSSSQGHVP--------------------IV-------------  202 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~----~----~-~vAVK~l~~~~~~~~~~--------------------Lv-------------  202 (342)
                      +.||+|.||.|++|...    .    . .||||.++........+                    |+             
T Consensus       302 ~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v~  381 (609)
T KOG0200|consen  302 KYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVIV  381 (609)
T ss_pred             ceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEEE
Confidence            69999999999999853    1    3 79999998776552222                    22             


Q ss_pred             -EeeCC--------cE-----------------EEE---------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--Cc
Q 039505          203 -ECHVG--------AL-----------------ITI---------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SR  245 (342)
Q Consensus       203 -~c~~~--------~l-----------------v~m---------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~  245 (342)
                       ||..+        .-                 +.+         ||.|++||++   .++|||||-..|||+.++  .|
T Consensus       382 Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~---~~~vHRDLAaRNVLi~~~~~~k  458 (609)
T KOG0200|consen  382 EYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLAS---VPCVHRDLAARNVLITKNKVIK  458 (609)
T ss_pred             EeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhh---CCccchhhhhhhEEecCCCEEE
Confidence             55443        11                 111         9999999999   999999999999999999  67


Q ss_pred             cccCCCCCccc-------cccccC--cceee---------------------------cCCCCccccccccccccccccc
Q 039505          246 ISPVEGGTHMS-------TTIAGT--AGFLN---------------------------TKNPVISKSIENGNSHLRDKST  289 (342)
Q Consensus       246 ~~~~~~~~~~~-------~~~~Gt--~~y~a---------------------------tG~~P~~~~~~~~~~~l~~~~~  289 (342)
                      +.+++......       ....|+  ..|||                           -|..|+.......  .++  +.
T Consensus       459 IaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~--~l~--~~  534 (609)
T KOG0200|consen  459 IADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTE--ELL--EF  534 (609)
T ss_pred             EccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHH--HHH--HH
Confidence            77766553211       111222  23887                           5666765422111  111  12


Q ss_pred             ccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhc
Q 039505          290 VDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQG  334 (342)
Q Consensus       290 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i  334 (342)
                      +....+.+.+..+..++.+++..||+.+|++||++.++++.++..
T Consensus       535 l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~  579 (609)
T KOG0200|consen  535 LKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH  579 (609)
T ss_pred             HhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence            222222344566777899999999999999999999999988773

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.37  E-value=1.1e-12  Score=116.12  Aligned_cols=153  Identities=21%  Similarity=0.207  Sum_probs=93.4

Q ss_pred             CCeeEEEEEECC-C-eEEEEEccCCCCCC-Ccc------------------EE-EeeCC---cEEE--E-----------
Q 039505          171 GFITVYHGQLVK-S-EVAMKMLSPSSSQG-HVP------------------IV-ECHVG---ALIT--I-----------  212 (342)
Q Consensus       171 ~fG~Vykg~~~~-~-~vAVK~l~~~~~~~-~~~------------------Lv-~c~~~---~lv~--m-----------  212 (342)
                      +||.||+|.+.. + .+|+|++....... .+.                  ++ +|...   .+++  +           
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~   80 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK   80 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence            589999999976 4 99999997664432 111                  22 23222   2333  1           


Q ss_pred             ---------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-----cccccccCcceee---
Q 039505          213 ---------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-----MSTTIAGTAGFLN---  267 (342)
Q Consensus       213 ---------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-----~~~~~~Gt~~y~a---  267 (342)
                                     +++++.|||+   .+++|+||+|+||+++++  .++.+++....     ......++..|++   
T Consensus        81 ~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~  157 (244)
T smart00220       81 RGRLSEDEARFYARQILSALEYLHS---NGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEV  157 (244)
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHH---cCeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHH
Confidence                           8899999999   899999999999999987  33333322211     1122345556655   


Q ss_pred             -----------------------cCCCCcccccccccccccccccccccCCCCCCh-HHHHHHHHHHHHcccccCCCCCC
Q 039505          268 -----------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDI-ISVGKAVEIAMASVSSKVNRRPL  323 (342)
Q Consensus       268 -----------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~-~~~~~l~~l~~~Cl~~~P~~RPs  323 (342)
                                             +|..|+.......  .+.+ ............. .....+.+++.+|+..+|++||+
T Consensus       158 ~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~  234 (244)
T smart00220      158 LLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLL--ELFK-KIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLT  234 (244)
T ss_pred             HccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHH--HHHH-HHhccCCCCccccccCCHHHHHHHHHHccCCchhccC
Confidence                                   6777765422111  1111 0000001000000 03456889999999999999999


Q ss_pred             HHHHHH
Q 039505          324 MNQVVM  329 (342)
Q Consensus       324 m~eV~~  329 (342)
                      +.++++
T Consensus       235 ~~~~~~  240 (244)
T smart00220      235 AEEALQ  240 (244)
T ss_pred             HHHHhh
Confidence            999986

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.36  E-value=5.8e-13  Score=111.73  Aligned_cols=79  Identities=25%  Similarity=0.434  Sum_probs=60.7

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc--------------------------------EE--EeeCCc
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP--------------------------------IV--ECHVGA  208 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~--------------------------------Lv--~c~~~~  208 (342)
                      +.||+|.||+||||+..++  .||+|++.....++...                                |+  +|...+
T Consensus         8 ekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~cdqdl   87 (292)
T KOG0662|consen    8 EKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDL   87 (292)
T ss_pred             HhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHhhHHH
Confidence            7899999999999998877  89999998765433221                                33  555430


Q ss_pred             EEE-------E-----------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCcc
Q 039505          209 LIT-------I-----------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI  246 (342)
Q Consensus       209 lv~-------m-----------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~~  246 (342)
                      --|       |           +.+||.|+|+   +.++|||+||.|.|++.++.+
T Consensus        88 kkyfdslng~~d~~~~rsfmlqllrgl~fchs---hnvlhrdlkpqnllin~ngel  140 (292)
T KOG0662|consen   88 KKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHS---HNVLHRDLKPQNLLINRNGEL  140 (292)
T ss_pred             HHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhh---hhhhhccCCcceEEeccCCcE
Confidence            000       1           7899999999   999999999999999999433

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.32  E-value=1.3e-12  Score=117.92  Aligned_cols=100  Identities=21%  Similarity=0.259  Sum_probs=68.8

Q ss_pred             cccCcCCCeeEEEEEECCC------eEEEEEccCCCCCCCcc--------------------EE--Eee-CC--cEEE-E
Q 039505          165 RVPYKGGFITVYHGQLVKS------EVAMKMLSPSSSQGHVP--------------------IV--ECH-VG--ALIT-I  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~------~vAVK~l~~~~~~~~~~--------------------Lv--~c~-~~--~lv~-m  212 (342)
                      ..||+|.||.||||.-.++      .+|+|+++......--.                    |+  +-. +.  .++| .
T Consensus        30 g~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~fdY  109 (438)
T KOG0666|consen   30 GKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVWLLFDY  109 (438)
T ss_pred             ceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEEEEehh
Confidence            6799999999999965433      79999998775432211                    22  222 11  3333 1


Q ss_pred             -------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC----CccccCCCCC----
Q 039505          213 -------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK----SRISPVEGGT----  253 (342)
Q Consensus       213 -------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~----a~~~~~~~~~----  253 (342)
                                                     |..|+.|||+   .-|+||||||+|||+..+    +++...+.+.    
T Consensus       110 AEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~---NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~  186 (438)
T KOG0666|consen  110 AEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHS---NWVLHRDLKPANILVMGDGPERGRVKIADLGLARLF  186 (438)
T ss_pred             hhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhh---hheeeccCCcceEEEeccCCccCeeEeecccHHHHh
Confidence                                           8999999999   999999999999999988    3333322221    


Q ss_pred             -------ccccccccCcceee
Q 039505          254 -------HMSTTIAGTAGFLN  267 (342)
Q Consensus       254 -------~~~~~~~Gt~~y~a  267 (342)
                             .....++-|++|.|
T Consensus       187 ~~plkpl~s~d~VVVTiWYRA  207 (438)
T KOG0666|consen  187 NNPLKPLASLDPVVVTIWYRA  207 (438)
T ss_pred             hccccccccCCceEEEEEecC
Confidence                   12344678889988

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.27  E-value=2.6e-12  Score=110.09  Aligned_cols=101  Identities=23%  Similarity=0.292  Sum_probs=68.8

Q ss_pred             cccCcCCCeeEEEEEEC-CC-eEEEEEccCCCCCCCcc-----------------EE-E----eeCC-cEEE---E----
Q 039505          165 RVPYKGGFITVYHGQLV-KS-EVAMKMLSPSSSQGHVP-----------------IV-E----CHVG-ALIT---I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~-~~-~vAVK~l~~~~~~~~~~-----------------Lv-~----c~~~-~lv~---m----  212 (342)
                      ..||+|++|.|-+-++. ++ ..|||++...-....+.                 .+ |    ..++ ..++   |    
T Consensus        52 ~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~tSl  131 (282)
T KOG0984|consen   52 EELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMDTSL  131 (282)
T ss_pred             hhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhhhhH
Confidence            67999999999888875 44 89999997664432222                 22 1    1122 2333   2    


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCc--cccCCCCCccc-----cccc
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSR--ISPVEGGTHMS-----TTIA  260 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~--~~~~~~~~~~~-----~~~~  260 (342)
                                               |.+||.|||+.  ..|||||+||+||||+.+++  +++++-.....     +...
T Consensus       132 dkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~k--L~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt~da  209 (282)
T KOG0984|consen  132 DKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSK--LSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKTMDA  209 (282)
T ss_pred             HHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHH--hhhhhccCCcceEEEccCCcEEEcccccceeehhhhHHHHhc
Confidence                                     78999999994  78999999999999999954  44444333222     2245


Q ss_pred             cCcceee
Q 039505          261 GTAGFLN  267 (342)
Q Consensus       261 Gt~~y~a  267 (342)
                      |.-.|||
T Consensus       210 GCkpYma  216 (282)
T KOG0984|consen  210 GCKPYMA  216 (282)
T ss_pred             CCCccCC
Confidence            6677777

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.26  E-value=5.1e-12  Score=116.86  Aligned_cols=76  Identities=21%  Similarity=0.302  Sum_probs=56.8

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCC--------------------CCcc---EE-Eee-CC--cEEE--E-
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQ--------------------GHVP---IV-ECH-VG--ALIT--I-  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~--------------------~~~~---Lv-~c~-~~--~lv~--m-  212 (342)
                      ..+|+|.||.|-++.....  .||||+++.-..-                    +...   +. |.. .+  ++|+  | 
T Consensus        95 ~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfellG  174 (415)
T KOG0671|consen   95 DLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELLG  174 (415)
T ss_pred             hhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEeccC
Confidence            7899999999999998766  9999998643211                    0000   11 221 12  5566  3 


Q ss_pred             --------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC
Q 039505          213 --------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK  243 (342)
Q Consensus       213 --------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~  243 (342)
                                                ++++++|||+   .+++|-||||+|||+-+.
T Consensus       175 ~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~---~kl~HTDLKPENILfvss  228 (415)
T KOG0671|consen  175 LSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHD---LKLTHTDLKPENILFVSS  228 (415)
T ss_pred             hhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHh---cceeecCCChheEEEecc
Confidence                                      8899999999   999999999999998876

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.23  E-value=1.3e-11  Score=107.43  Aligned_cols=29  Identities=28%  Similarity=0.326  Sum_probs=25.9

Q ss_pred             cccCcCCCeeEEEEEECCC-eEEEEEccCC
Q 039505          165 RVPYKGGFITVYHGQLVKS-EVAMKMLSPS  193 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~  193 (342)
                      ..||+|+||.||+|...++ .||||+++..
T Consensus         3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~   32 (190)
T cd05147           3 GCISTGKEANVYHATTANGEERAIKIYKTS   32 (190)
T ss_pred             CccccccceEEEEEECCCCCEEEEEEEEec
Confidence            5799999999999998867 9999999754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PLN03150 hypothetical protein; Provisional

Probab=99.22  E-value=1.1e-11  Score=126.41  Aligned_cols=86  Identities=24%  Similarity=0.293  Sum_probs=68.6

Q ss_pred             ccCCCCC--cccCCcceEEecCcchhccCcccccchhhcchhhhccccccccC--CCCcCccccccccCCcceeEEeeec
Q 039505           24 EHEAGSS--YTEASTKLKYISDTNYIETGLAKSILLQHRRAKQQQVWSLRSFP--DGIRNCYRFNLTRDSKYLIRTTFIH   99 (342)
Q Consensus        24 ~~~~~~~--~~~~~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~r~fp--~~~~~C~~l~~~~~~~~llr~~fl~   99 (342)
                      .|+||++  ++.+.+|++|++|..|+.++..+..++.   ...++++++|+||  +|.+|||++++.++.+|+||..|++
T Consensus        27 ~I~CGs~~~~~~d~~~~~w~~D~~~~~~~~~~~~~~~---~~~~~~~t~R~F~~~~g~~~cY~~~~~~~g~ylVRl~F~~  103 (623)
T PLN03150         27 RISCGARVNVRTAPTNTLWYKDFAYTGGIPANATRPS---FIAPPLKTLRYFPLSDGPENCYNINRVPKGHYSVRVFFGL  103 (623)
T ss_pred             EEeCCCCCCcccCCCCCEEcCCcccccCccccccCcc---cccchhhccccCCcccccccceEeeecCCCcEEEEEEeec
Confidence            3889965  3223489999999999765444444332   3467899999999  5789999999888899999999999


Q ss_pred             cCcCCCCCCCCCC
Q 039505          100 GNYDEQNILPDFK  112 (342)
Q Consensus       100 gN~~~~~~pp~f~  112 (342)
                      +||+..+.+|.|+
T Consensus       104 ~~y~~~~~~~~Fd  116 (623)
T PLN03150        104 VAEPNFDSEPLFD  116 (623)
T ss_pred             CCcCCCCCCCceE
Confidence            9999887888886

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.22  E-value=3.8e-13  Score=118.26  Aligned_cols=76  Identities=28%  Similarity=0.480  Sum_probs=55.6

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCC-CCCCcc---------------------------------------EE
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSS-SQGHVP---------------------------------------IV  202 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~-~~~~~~---------------------------------------Lv  202 (342)
                      .+||+|.||.||+|+.+++  .||+|+.-... ..+...                                       ++
T Consensus        23 ~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylV  102 (376)
T KOG0669|consen   23 AKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLV  102 (376)
T ss_pred             HhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeee
Confidence            7899999999999998876  88988764322 111111                                       22


Q ss_pred             --EeeCC---cE----EEE-----------ehhhhhhhhccCCCCeeeCCCCcceEEecCC
Q 039505          203 --ECHVG---AL----ITI-----------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK  243 (342)
Q Consensus       203 --~c~~~---~l----v~m-----------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~  243 (342)
                        +|..+   +|    +-|           +..||.|+|.   ..|+|||+|++|+||+.+
T Consensus       103 f~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr---~kilHRDmKaaNvLIt~d  160 (376)
T KOG0669|consen  103 FDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHR---NKILHRDMKAANVLITKD  160 (376)
T ss_pred             HHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHH---hhHHhhcccHhhEEEcCC
Confidence              44433   00    000           8899999999   999999999999999998

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.20  E-value=7e-11  Score=101.68  Aligned_cols=148  Identities=24%  Similarity=0.317  Sum_probs=87.8

Q ss_pred             cCcCCCeeEEEEEECC-C-eEEEEEccCCCCC-----CCcc--------------EE-EeeCC---cEEE--E-------
Q 039505          167 PYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQ-----GHVP--------------IV-ECHVG---ALIT--I-------  212 (342)
Q Consensus       167 lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~-----~~~~--------------Lv-~c~~~---~lv~--m-------  212 (342)
                      ||+|++|.||++.... + .+++|++......     ..++              ++ ++...   .+++  +       
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            6899999999999975 4 9999999876542     1111              22 22221   2222  1       


Q ss_pred             --------------------ehhhhhhhhccCCCCeeeCCCCcceEEecC-C--CccccCCCCCcc------ccccccCc
Q 039505          213 --------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNE-K--SRISPVEGGTHM------STTIAGTA  263 (342)
Q Consensus       213 --------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~-~--a~~~~~~~~~~~------~~~~~Gt~  263 (342)
                                          +++++.|||+   .+++|+||+|.||+++. +  .++.+++.....      .....+..
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~  157 (215)
T cd00180          81 LLKENEGKLSEDEILRILLQILEGLEYLHS---NGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTP  157 (215)
T ss_pred             HHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCC
Confidence                                8899999999   89999999999999998 5  333332222111      11122333


Q ss_pred             ceee---cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHH
Q 039505          264 GFLN---TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMV  330 (342)
Q Consensus       264 ~y~a---tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~  330 (342)
                      .|++   ....+..  ....  +++....         -.-++..+.+++..|++.+|++||++.++++.
T Consensus       158 ~~~~pe~~~~~~~~--~~~~--D~~~lg~---------~~~~l~~~~~~l~~~l~~~p~~R~~~~~l~~~  214 (215)
T cd00180         158 AYMAPEVLLGKGYY--SEKS--DIWSLGV---------ILYELPELKDLIRKMLQKDPEKRPSAKEILEH  214 (215)
T ss_pred             CccChhHhcccCCC--Cchh--hhHHHHH---------HHHHHHHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence            3333   0000000  0000  0000000         00011678899999999999999999999864

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.20  E-value=3.4e-11  Score=114.62  Aligned_cols=88  Identities=20%  Similarity=0.251  Sum_probs=59.8

Q ss_pred             hccC--cccCcCCCeeEEEEEECC--C-eEEEEEccCCCC---CC------Ccc-----------EE--EeeCC--cEEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVK--S-EVAMKMLSPSSS---QG------HVP-----------IV--ECHVG--ALIT  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~--~-~vAVK~l~~~~~---~~------~~~-----------Lv--~c~~~--~lv~  211 (342)
                      ++|.  +.||+|+||+||+|++..  + .||||++.....   ..      ..|           ++  .+..+  ++|+
T Consensus        18 ~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~~~~~LVm   97 (365)
T PRK09188         18 ARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLATGKDGLVR   97 (365)
T ss_pred             CCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEcCCcEEEE
Confidence            3454  899999999999998864  3 789998753311   00      011           11  11111  3333


Q ss_pred             --E-------------------ehhhhhhhhccCCCCeeeCCC-CcceEEecCC--CccccCCC
Q 039505          212 --I-------------------PKEGLEYLHQGLKHPIIQRDM-KSTNILLNEK--SRISPVEG  251 (342)
Q Consensus       212 --m-------------------ia~gL~yLH~~~~~~IiHrDl-Kp~NILLd~~--a~~~~~~~  251 (342)
                        +                   +++||+|||+   .+|+|||| ||+|||++.+  .++.+++.
T Consensus        98 E~~~G~~L~~~~~~~~~~~~~~i~~aL~~lH~---~gIiHrDL~KP~NILv~~~~~ikLiDFGl  158 (365)
T PRK09188         98 GWTEGVPLHLARPHGDPAWFRSAHRALRDLHR---AGITHNDLAKPQNWLMGPDGEAAVIDFQL  158 (365)
T ss_pred             EccCCCCHHHhCccchHHHHHHHHHHHHHHHH---CCCeeCCCCCcceEEEcCCCCEEEEECcc
Confidence              1                   7899999999   99999999 9999999876  45555443

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.17  E-value=3.8e-11  Score=123.77  Aligned_cols=104  Identities=22%  Similarity=0.350  Sum_probs=69.6

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-------c--------------EE-EeeCC---cEEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-------P--------------IV-ECHVG---ALIT  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-------~--------------Lv-~c~~~---~lv~  211 (342)
                      ++|.  +.||+|+||+||+|.+...  .||||+++........       +              ++ .+...   ++|+
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm   83 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM   83 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence            3454  8999999999999998744  9999999754321110       0              22 22222   3333


Q ss_pred             --E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------c
Q 039505          212 --I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------M  255 (342)
Q Consensus       212 --m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~  255 (342)
                        +                          ++.||+|||.   .+||||||||+|||++.+  .++.+++....      .
T Consensus        84 Ey~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~---~gIiHrDLKP~NILl~~~g~vkL~DFGls~~~~~~~~~  160 (669)
T cd05610          84 EYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHR---HGIIHRDLKPDNMLISNEGHIKLTDFGLSKVTLNRELN  160 (669)
T ss_pred             eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCccHHHEEEcCCCCEEEEeCCCCccccCCccc
Confidence              1                          8899999999   899999999999999988  34444433221      1


Q ss_pred             ccccccCcceee
Q 039505          256 STTIAGTAGFLN  267 (342)
Q Consensus       256 ~~~~~Gt~~y~a  267 (342)
                      .....+|+.|++
T Consensus       161 ~~~~~~t~~~~~  172 (669)
T cd05610         161 MMDILTTPSMAK  172 (669)
T ss_pred             ccccccCccccC
Confidence            123567777776

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.16  E-value=4.1e-12  Score=110.38  Aligned_cols=82  Identities=22%  Similarity=0.406  Sum_probs=58.7

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc----------------EE-EeeCC-----cEEE--E------
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP----------------IV-ECHVG-----ALIT--I------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~----------------Lv-~c~~~-----~lv~--m------  212 (342)
                      +.+|+|.|++||.|..-..  .++||+++.-.....+.                |+ ...+.     .|+|  +      
T Consensus        44 rk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk  123 (338)
T KOG0668|consen   44 RKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNNTDFK  123 (338)
T ss_pred             HHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhccccHH
Confidence            8999999999999985433  89999997654322211                11 11110     3333  1      


Q ss_pred             -----------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC---CccccC
Q 039505          213 -----------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK---SRISPV  249 (342)
Q Consensus       213 -----------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~---a~~~~~  249 (342)
                                       ++.||.|+|+   .||+|||+||.|+++|..   .|+++.
T Consensus       124 ~ly~tl~d~dIryY~~elLkALdyCHS---~GImHRDVKPhNvmIdh~~rkLrlIDW  177 (338)
T KOG0668|consen  124 QLYPTLTDYDIRYYIYELLKALDYCHS---MGIMHRDVKPHNVMIDHELRKLRLIDW  177 (338)
T ss_pred             HHhhhhchhhHHHHHHHHHHHHhHHHh---cCcccccCCcceeeechhhceeeeeec
Confidence                             8999999999   999999999999999987   445443

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.13  E-value=8.6e-11  Score=114.86  Aligned_cols=88  Identities=24%  Similarity=0.230  Sum_probs=61.7

Q ss_pred             HHHHHHHhhc---cC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc------------------EE--Ee-
Q 039505          153 LELSLRVTNN---FE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP------------------IV--EC-  204 (342)
Q Consensus       153 ~~~l~~at~~---f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~------------------Lv--~c-  204 (342)
                      |--|++|.-+   |-  +-||-|+||+|..++--++  .+|.|.+.+.+.-....                  ++  |+ 
T Consensus       618 YiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyyS  697 (1034)
T KOG0608|consen  618 YIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYS  697 (1034)
T ss_pred             HHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEE
Confidence            4445555433   32  6799999999999987776  89999887653211111                  33  22 


Q ss_pred             eCC--cEEE-E-----------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC
Q 039505          205 HVG--ALIT-I-----------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK  243 (342)
Q Consensus       205 ~~~--~lv~-m-----------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~  243 (342)
                      ..+  .|-| |                             +..|+++.|.   .++|||||||.|||||.|
T Consensus       698 FQDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHk---mGFIHRDiKPDNILIDrd  765 (1034)
T KOG0608|consen  698 FQDKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRD  765 (1034)
T ss_pred             eccCCceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHh---ccceecccCccceEEccC
Confidence            222  2222 2                             5679999999   999999999999999998

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.13  E-value=2.9e-11  Score=127.08  Aligned_cols=27  Identities=11%  Similarity=0.241  Sum_probs=25.5

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecC
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNE  242 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~  242 (342)
                      |++||+|||+   .+|+||||||+||||+.
T Consensus        89 i~~al~~lH~---~gIvHrDlKP~NiLl~~  115 (793)
T PLN00181         89 IVEIVNAAHS---QGIVVHNVRPSCFVMSS  115 (793)
T ss_pred             HHHHHHHHHh---CCeeeccCCchhEEEcc
Confidence            8999999999   99999999999999954

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.13  E-value=4.8e-11  Score=111.67  Aligned_cols=76  Identities=29%  Similarity=0.487  Sum_probs=57.4

Q ss_pred             cccCcCCCeeEEEEEECC---C--eEEEEEccCCCCCCCcc--------------EE---EeeCC----cEEE--E----
Q 039505          165 RVPYKGGFITVYHGQLVK---S--EVAMKMLSPSSSQGHVP--------------IV---ECHVG----ALIT--I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~---~--~vAVK~l~~~~~~~~~~--------------Lv---~c~~~----~lv~--m----  212 (342)
                      +.||+|.|++||++.+..   .  .||+|.+...+....-.              ++   .|...    ..|.  +    
T Consensus        42 ~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~~~H~~  121 (418)
T KOG1167|consen   42 NKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPYFEHDR  121 (418)
T ss_pred             ccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEecccCccC
Confidence            899999999999998755   3  89999997765433221              22   33222    2232  2    


Q ss_pred             -------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC
Q 039505          213 -------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK  243 (342)
Q Consensus       213 -------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~  243 (342)
                                         +..||.++|.   .+||||||||+|+|.+..
T Consensus       122 f~~l~~~l~~~~i~~Yl~~ll~Al~~~h~---~GIvHRDiKpsNFL~n~~  168 (418)
T KOG1167|consen  122 FRDLYRSLSLAEIRWYLRNLLKALAHLHK---NGIVHRDIKPSNFLYNRR  168 (418)
T ss_pred             HHHHHhcCCHHHHHHHHHHHHHHhhhhhc---cCccccCCCccccccccc
Confidence                               8889999999   999999999999998866

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.11  E-value=7.1e-11  Score=114.38  Aligned_cols=108  Identities=17%  Similarity=0.221  Sum_probs=80.6

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCC------CCcc-----------------------EE-EeeCC---cE
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQ------GHVP-----------------------IV-ECHVG---AL  209 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~------~~~~-----------------------Lv-~c~~~---~l  209 (342)
                      ..+|+|+||.|..|.++..  .|+||.+.+...-      +.+-                       ++ +..+.   ++
T Consensus       567 q~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd~yyl  646 (772)
T KOG1152|consen  567 QPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDDYYYL  646 (772)
T ss_pred             eeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCCeeEE
Confidence            7899999999999999877  9999998765311      1110                       44 44443   22


Q ss_pred             EE------------------E-----------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCccc--
Q 039505          210 IT------------------I-----------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHMS--  256 (342)
Q Consensus       210 v~------------------m-----------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~~--  256 (342)
                      +.                  |           |+.|+++||+   .+|||||||-+|+.++.+  +|+++++......  
T Consensus       647 ~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~---~~ivhrdikdenvivd~~g~~klidfgsaa~~ksg  723 (772)
T KOG1152|consen  647 ETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHD---QGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSG  723 (772)
T ss_pred             EecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccc---cCceecccccccEEEecCCeEEEeeccchhhhcCC
Confidence            22                  1           8899999999   999999999999999999  7888876654433  


Q ss_pred             --cccccCcceee---cCCCCccc
Q 039505          257 --TTIAGTAGFLN---TKNPVISK  275 (342)
Q Consensus       257 --~~~~Gt~~y~a---tG~~P~~~  275 (342)
                        ..++||.+|.|   -|-.++.+
T Consensus       724 pfd~f~gtv~~aapevl~g~~y~g  747 (772)
T KOG1152|consen  724 PFDVFVGTVDYAAPEVLGGEKYLG  747 (772)
T ss_pred             CcceeeeeccccchhhhCCCccCC
Confidence              44789999999   45555544

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.04  E-value=1.9e-10  Score=110.19  Aligned_cols=86  Identities=24%  Similarity=0.321  Sum_probs=63.0

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCC---CCCCcc--------------------EE--EeeCC--cEEE----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSS---SQGHVP--------------------IV--ECHVG--ALIT----  211 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~---~~~~~~--------------------Lv--~c~~~--~lv~----  211 (342)
                      ...|+|-|++|.+|.....  .||||++....   ..+..+                    |+  |....  +|||    
T Consensus       438 ~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVFE~Ls  517 (752)
T KOG0670|consen  438 GYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVFEPLS  517 (752)
T ss_pred             eccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEehhhh
Confidence            4568999999999988755  99999997642   112222                    23  22222  7888    


Q ss_pred             E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC---CccccCCCCC
Q 039505          212 I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK---SRISPVEGGT  253 (342)
Q Consensus       212 m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~---a~~~~~~~~~  253 (342)
                      |                          +.-||..|-.   .+|+|.||||.|||+++.   .++++++...
T Consensus       518 lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~---c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~  585 (752)
T KOG0670|consen  518 LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKK---CGVLHADIKPDNILVNESKNILKLCDFGSAS  585 (752)
T ss_pred             chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHh---cCeeecccCccceEeccCcceeeeccCcccc
Confidence            2                          5568888888   899999999999999998   6677665543

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.00  E-value=7.4e-10  Score=96.32  Aligned_cols=36  Identities=25%  Similarity=0.299  Sum_probs=28.9

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC-CccccCC
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-SRISPVE  250 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-a~~~~~~  250 (342)
                      +++++.|+|+.  .+|+||||||+|||++++ .++.+++
T Consensus       126 l~~~l~~lH~~--~givHrDlkP~NIll~~~~~~liDFG  162 (190)
T cd05145         126 VVEQMRRLYQE--AGLVHGDLSEYNILYHDGKPYIIDVS  162 (190)
T ss_pred             HHHHHHHHHHh--CCEecCCCChhhEEEECCCEEEEEcc
Confidence            88999999983  689999999999999833 4444443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=98.99  E-value=5.4e-10  Score=95.22  Aligned_cols=113  Identities=13%  Similarity=-0.014  Sum_probs=70.7

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCCCccccCCCCCcc-ccccccCcceee------------------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTHM-STTIAGTAGFLN------------------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~~~~~~~~~~~-~~~~~Gt~~y~a------------------------  267 (342)
                      +++||+|||+   .+      ||+|||++.+..+..++..... .....||+.|||                        
T Consensus        26 i~~~L~~lH~---~~------kp~Nil~~~~~~~~~fG~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~e   96 (176)
T smart00750       26 CLRALRELHR---QA------KSGNILLTWDGLLKLDGSVAFKTPEQSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYE   96 (176)
T ss_pred             HHHHHHHHHh---cC------CcccEeEcCccceeeccceEeeccccCCCcccccChHHhcCCCCcchhhHHHHHHHHHH
Confidence            8899999999   44      9999999988443333322111 122468899998                        


Q ss_pred             --cCCCCcccccccccccccc--cccccccCCC--CCChHHHH--HHHHHHHHcccccCCCCCCHHHHHHHHHhccC
Q 039505          268 --TKNPVISKSIENGNSHLRD--KSTVDLSFKG--EFDIISVG--KAVEIAMASVSSKVNRRPLMNQVVMVREQGNG  336 (342)
Q Consensus       268 --tG~~P~~~~~~~~~~~l~~--~~~~d~~l~~--~~~~~~~~--~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~  336 (342)
                        ||+.|+.......  ....  .....+....  ........  .+.+++.+||+.+|++||++.|+++.+..+..
T Consensus        97 lltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~  171 (176)
T smart00750       97 ALDYELPYNEERELS--AILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFA  171 (176)
T ss_pred             HHhCCCCccccchhc--HHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHH
Confidence              8888886543211  1111  0000000000  11112222  58999999999999999999999998876543

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=98.96  E-value=2e-09  Score=95.90  Aligned_cols=83  Identities=17%  Similarity=0.302  Sum_probs=59.2

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC---cc------------EE--E----eeCCcEEE-E--------
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH---VP------------IV--E----CHVGALIT-I--------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~---~~------------Lv--~----c~~~~lv~-m--------  212 (342)
                      +.+|+|.||.+-.+.++..  .+++|.+........   ++            ++  |    -..++.|| +        
T Consensus        30 k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~aP~gdL  109 (378)
T KOG1345|consen   30 KQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEFAPRGDL  109 (378)
T ss_pred             HHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeeccCccchh
Confidence            7899999999999999876  899998865432111   11            11  0    01113344 2        


Q ss_pred             --------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC----CccccCC
Q 039505          213 --------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK----SRISPVE  250 (342)
Q Consensus       213 --------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~----a~~~~~~  250 (342)
                                          +++|++|+|+   ..+||||||.+|||+-..    .++++++
T Consensus       110 ~snv~~~GigE~~~K~v~~ql~SAi~fMHs---knlVHRdlK~eNiLif~~df~rvKlcDFG  168 (378)
T KOG1345|consen  110 RSNVEAAGIGEANTKKVFAQLLSAIEFMHS---KNLVHRDLKAENILIFDADFYRVKLCDFG  168 (378)
T ss_pred             hhhcCcccccHHHHHHHHHHHHHHHHHhhc---cchhhcccccceEEEecCCccEEEeeecc
Confidence                                8899999999   999999999999998654    4445444

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=98.89  E-value=5.1e-09  Score=91.97  Aligned_cols=76  Identities=28%  Similarity=0.384  Sum_probs=55.3

Q ss_pred             cccCcCCCeeEEEEEE-CCC-eEEEEEccCCCCCCCc--c---------------EE-EeeCC---cEEE-E--------
Q 039505          165 RVPYKGGFITVYHGQL-VKS-EVAMKMLSPSSSQGHV--P---------------IV-ECHVG---ALIT-I--------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~-~~~-~vAVK~l~~~~~~~~~--~---------------Lv-~c~~~---~lv~-m--------  212 (342)
                      +.||+|+||.+|.|.. .++ .||||.=+.......-  |               +. |-.+.   .+|+ +        
T Consensus        21 rkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLLGPsLEdL  100 (341)
T KOG1163|consen   21 RKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLLGPSLEDL  100 (341)
T ss_pred             EeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeeccCccHHHH
Confidence            8999999999999976 455 9999986654332211  1               22 33333   4444 1        


Q ss_pred             -------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC
Q 039505          213 -------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK  243 (342)
Q Consensus       213 -------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~  243 (342)
                                         +..-++|+|.   ++.|||||||.|.|..-+
T Consensus       101 fnfC~R~ftmkTvLMLaDQml~RiEyvH~---r~fiHRDIKPdNFLMGlg  147 (341)
T KOG1163|consen  101 FNFCSRRFTMKTVLMLADQMLSRIEYVHL---RNFIHRDIKPDNFLMGLG  147 (341)
T ss_pred             HHHHhhhhhHHhHHHHHHHHHHHHHHHHh---hccccccCCccceeeccc
Confidence                               5667899999   999999999999997755

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=98.86  E-value=5.8e-09  Score=91.13  Aligned_cols=83  Identities=19%  Similarity=0.129  Sum_probs=57.8

Q ss_pred             cccCcCCCeeEEEEEECCC-eEEEEEccCCCCC-----C---------------------Ccc-----------------
Q 039505          165 RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQ-----G---------------------HVP-----------------  200 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~-----~---------------------~~~-----------------  200 (342)
                      +.||+|+||.||+|.+.++ .||||++......     .                     ..+                 
T Consensus        21 ~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~v~~~  100 (198)
T cd05144          21 NQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFPVPKP  100 (198)
T ss_pred             CccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCCCCce
Confidence            8899999999999998777 9999986543200     0                     000                 


Q ss_pred             -------EE--EeeCC----cEE-E----E---ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCC
Q 039505          201 -------IV--ECHVG----ALI-T----I---PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVE  250 (342)
Q Consensus       201 -------Lv--~c~~~----~lv-~----m---ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~  250 (342)
                             ++  |+.+.    ... -    +   +++++.++|+   .+|+||||||+||+++++.  ++.+++
T Consensus       101 ~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~i~~~l~~lh~---~gi~H~Dl~p~Nill~~~~~~~liDfg  170 (198)
T cd05144         101 IDWNRHAVVMEYIDGVELYRVRVLEDPEEVLDEILEEIVKAYK---HGIIHGDLSEFNILVDDDEKIYIIDWP  170 (198)
T ss_pred             eecCCceEEEEEeCCcchhhccccccHHHHHHHHHHHHHHHHH---CCCCcCCCCcccEEEcCCCcEEEEECC
Confidence                   11  22222    101 0    0   7889999999   9999999999999999774  444443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.82  E-value=2.8e-10  Score=101.39  Aligned_cols=35  Identities=37%  Similarity=0.634  Sum_probs=31.0

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCC
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVE  250 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~  250 (342)
                      |.+||.|||+   .+|+||||||.|.|++.|  .|+++++
T Consensus       165 ILRGLKYLHs---A~ILHRDIKPGNLLVNSNCvLKICDFG  201 (449)
T KOG0664|consen  165 ILRGLKYLHT---ANILHRDIKPGNLLVNSNCILKICDFG  201 (449)
T ss_pred             HHhhhHHHhh---cchhhccCCCccEEeccCceEEecccc
Confidence            9999999999   999999999999999999  4555544

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=98.80  E-value=3.2e-08  Score=93.25  Aligned_cols=170  Identities=15%  Similarity=0.122  Sum_probs=97.6

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC---eEEEEEccCCCCCCCcc----------------------EE-Ee-eCC---cE
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS---EVAMKMLSPSSSQGHVP----------------------IV-EC-HVG---AL  209 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~---~vAVK~l~~~~~~~~~~----------------------Lv-~c-~~~---~l  209 (342)
                      .|.  +.||+|+||.||++.....   .+|+|.-..........                      ++ .- ..+   ++
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            455  8999999999999997653   68888876543221100                      23 22 112   44


Q ss_pred             EE-E----------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC-------ccccCCCCC
Q 039505          210 IT-I----------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS-------RISPVEGGT  253 (342)
Q Consensus       210 v~-m----------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a-------~~~~~~~~~  253 (342)
                      |+ +                            +..+|++||+   .+++||||||+|+++....       .+++++...
T Consensus        99 VM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~---~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar  175 (322)
T KOG1164|consen   99 VMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHS---KGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLAR  175 (322)
T ss_pred             EEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHh---cCcccCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence            44 2                            7789999999   9999999999999998541       122222211


Q ss_pred             ------------c-c---ccccccCcceee--------------------------cCCCCccccccccccccccccccc
Q 039505          254 ------------H-M---STTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVD  291 (342)
Q Consensus       254 ------------~-~---~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d  291 (342)
                                  . .   .....||..|.+                          .|..|+..........-+.....+
T Consensus       176 ~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~  255 (322)
T KOG1164|consen  176 RFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRK  255 (322)
T ss_pred             cccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhh
Confidence                        0 0   122458988887                          566666443321100000000000


Q ss_pred             ccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhcc
Q 039505          292 LSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       292 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                      ... ..........+.++...+-..+..++|.-..+...|+...
T Consensus       256 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~  298 (322)
T KOG1164|consen  256 LLT-DRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVF  298 (322)
T ss_pred             hcc-ccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHH
Confidence            000 0011112334555555555678899999888888776653

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=98.80  E-value=4e-09  Score=94.08  Aligned_cols=166  Identities=12%  Similarity=0.162  Sum_probs=104.1

Q ss_pred             cccCcCCCeeEEEEEECCCeEEEEEccCCCCC-----CCcc---------------EE-EeeCC-cEEE----E------
Q 039505          165 RVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQ-----GHVP---------------IV-ECHVG-ALIT----I------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~~vAVK~l~~~~~~-----~~~~---------------Lv-~c~~~-~lv~----m------  212 (342)
                      .+|.+...|+.|+|+|++..+++|+++.....     +..+               ++ .|... .+|.    |      
T Consensus       196 tkl~e~hsgelwrgrwqgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gsly  275 (448)
T KOG0195|consen  196 TKLAESHSGELWRGRWQGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSLY  275 (448)
T ss_pred             hhhccCCCcccccccccCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHHH
Confidence            56788889999999999887777877654321     1111               34 56554 2221    3      


Q ss_pred             ----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc-ccccccCcceee
Q 039505          213 ----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM-STTIAGTAGFLN  267 (342)
Q Consensus       213 ----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~-~~~~~Gt~~y~a  267 (342)
                                            +|+|++|||+- ++-|..--|.+..+++|++  +|+...+...+. ...-..++.||+
T Consensus       276 nvlhe~t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kfsfqe~gr~y~pawms  354 (448)
T KOG0195|consen  276 NVLHEQTSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEVGRAYSPAWMS  354 (448)
T ss_pred             HHHhcCccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccceeeeeccccccCcccCC
Confidence                                  99999999993 2334444688899999999  666543222111 112345677776


Q ss_pred             -----------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccC
Q 039505          268 -----------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKV  318 (342)
Q Consensus       268 -----------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P  318 (342)
                                                   |...||......+-.    .++.-..++...++....-+.+++.-|+..||
T Consensus       355 pealqrkped~n~raadmwsfaillwel~trevpfadlspmecg----mkialeglrv~ippgis~hm~klm~icmnedp  430 (448)
T KOG0195|consen  355 PEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECG----MKIALEGLRVHIPPGISRHMNKLMNICMNEDP  430 (448)
T ss_pred             HHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhh----hhhhhccccccCCCCccHHHHHHHHHHhcCCC
Confidence                                         666666554322200    11111122223344444557888889999999


Q ss_pred             CCCCCHHHHHHHHHhcc
Q 039505          319 NRRPLMNQVVMVREQGN  335 (342)
Q Consensus       319 ~~RPsm~eV~~~L~~i~  335 (342)
                      .+||.+..|+-.|+.++
T Consensus       431 gkrpkfdmivpilekm~  447 (448)
T KOG0195|consen  431 GKRPKFDMIVPILEKMI  447 (448)
T ss_pred             CcCCCcceehhhHHHhc
Confidence            99999999999998764

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.74  E-value=7.9e-09  Score=98.63  Aligned_cols=77  Identities=30%  Similarity=0.433  Sum_probs=57.8

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCC----------------CC-----cc----EE--EeeCC------cE
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQ----------------GH-----VP----IV--ECHVG------AL  209 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~----------------~~-----~~----Lv--~c~~~------~l  209 (342)
                      ++||=|.|++||.|+...+  .||+|+.+....-                +.     ++    |+  |-..|      ++
T Consensus        84 rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCM  163 (590)
T KOG1290|consen   84 RKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCM  163 (590)
T ss_pred             EeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEE
Confidence            8999999999999998655  9999998754210                00     00    44  33333      56


Q ss_pred             EE--E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC
Q 039505          210 IT--I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK  243 (342)
Q Consensus       210 v~--m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~  243 (342)
                      ||  +                           |+.||.|||..  .+|||-||||+||||..+
T Consensus       164 VfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~e--cgIIHTDlKPENvLl~~~  224 (590)
T KOG1290|consen  164 VFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRE--CGIIHTDLKPENVLLCST  224 (590)
T ss_pred             EehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHh--cCccccCCCcceeeeecc
Confidence            66  2                           88899999996  579999999999999866

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.73  E-value=3.7e-08  Score=85.80  Aligned_cols=81  Identities=17%  Similarity=0.286  Sum_probs=54.9

Q ss_pred             ccCcCCCeeEEEEEECCCeEEEEEccCCCCCCC------------cc----------------EEEeeCC--cEEE--E-
Q 039505          166 VPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGH------------VP----------------IVECHVG--ALIT--I-  212 (342)
Q Consensus       166 ~lG~G~fG~Vykg~~~~~~vAVK~l~~~~~~~~------------~~----------------Lv~c~~~--~lv~--m-  212 (342)
                      +||+|+||.||+|.+.+..|++|+.........            .+                ++++...  .+++  + 
T Consensus         1 ~ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~   80 (199)
T TIGR03724         1 LIAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE   80 (199)
T ss_pred             CCCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence            589999999999997555899998654321110            01                1111111  3333  2 


Q ss_pred             ------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-CccccC
Q 039505          213 ------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-SRISPV  249 (342)
Q Consensus       213 ------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-a~~~~~  249 (342)
                                        ++++|.+||+   .+++|||++|.||+++++ ..+.++
T Consensus        81 g~~l~~~~~~~~~~~~~~i~~~l~~lH~---~gi~H~Dl~~~Nil~~~~~~~liDf  133 (199)
T TIGR03724        81 GKPLKDVIEEGNDELLREIGRLVGKLHK---AGIVHGDLTTSNIIVRDDKLYLIDF  133 (199)
T ss_pred             CccHHHHHhhcHHHHHHHHHHHHHHHHH---CCeecCCCCcceEEEECCcEEEEEC
Confidence                              7889999999   999999999999999833 344443

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>smart00090 RIO RIO-like kinase

Probab=98.72  E-value=1.4e-08  Score=91.49  Aligned_cols=26  Identities=23%  Similarity=0.362  Sum_probs=24.9

Q ss_pred             ehhhhhhhhccCCCC-eeeCCCCcceEEec
Q 039505          213 PKEGLEYLHQGLKHP-IIQRDMKSTNILLN  241 (342)
Q Consensus       213 ia~gL~yLH~~~~~~-IiHrDlKp~NILLd  241 (342)
                      +++++.|||+   .+ |+||||||+||+++
T Consensus       157 i~~~l~~LH~---~g~iiH~Dikp~NIli~  183 (237)
T smart00090      157 ILEEMRKLYK---EGELVHGDLSEYNILVH  183 (237)
T ss_pred             HHHHHHHHHh---cCCEEeCCCChhhEEEE
Confidence            8899999999   88 99999999999998

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.71  E-value=3.7e-08  Score=86.55  Aligned_cols=82  Identities=17%  Similarity=0.240  Sum_probs=55.8

Q ss_pred             cccCcCCCeeEEEEEECCCeEEEEEccCCCCCCC------------cc---------------EEEe-eCC--cEEE--E
Q 039505          165 RVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGH------------VP---------------IVEC-HVG--ALIT--I  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~~vAVK~l~~~~~~~~------------~~---------------Lv~c-~~~--~lv~--m  212 (342)
                      +.||+|++|.||+|.+.+..|+||+.........            .+               .+++ ...  .+++  +
T Consensus         2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~   81 (211)
T PRK14879          2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYI   81 (211)
T ss_pred             cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEe
Confidence            5789999999999998555899998654322110            00               1121 111  3333  2


Q ss_pred             ----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-CccccC
Q 039505          213 ----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-SRISPV  249 (342)
Q Consensus       213 ----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-a~~~~~  249 (342)
                                            ++.+|.++|+   .+++|||++|.|||++.+ ..+.++
T Consensus        82 ~G~~L~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~Dl~p~Nil~~~~~~~liDf  138 (211)
T PRK14879         82 EGEPLKDLINSNGMEELELSREIGRLVGKLHS---AGIIHGDLTTSNMILSGGKIYLIDF  138 (211)
T ss_pred             CCcCHHHHHHhccHHHHHHHHHHHHHHHHHHh---CCcccCCCCcccEEEECCCEEEEEC
Confidence                                  7789999999   999999999999999833 334443

>cd05119 RIO RIO kinase family, catalytic domain

Probab=98.70  E-value=2.3e-08  Score=86.16  Aligned_cols=29  Identities=21%  Similarity=0.074  Sum_probs=25.4

Q ss_pred             cccCcCCCeeEEEEEECCC-eEEEEEccCC
Q 039505          165 RVPYKGGFITVYHGQLVKS-EVAMKMLSPS  193 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~  193 (342)
                      +.||+|+||+||+|...++ .||||++...
T Consensus         3 ~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~   32 (187)
T cd05119           3 GPIGTGKEADVYLALDGDGEPVAVKIYRTG   32 (187)
T ss_pred             cccccccceeEEEEECCCCCEEEEEEEecC
Confidence            6799999999999998866 9999988753

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=98.70  E-value=7.2e-08  Score=88.59  Aligned_cols=96  Identities=11%  Similarity=0.061  Sum_probs=53.3

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCCCccccCCCCCccccc-----cccCcceee--------------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTHMSTT-----IAGTAGFLN--------------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~~~~~~~~~~~~~~-----~~Gt~~y~a--------------------  267 (342)
                      +.+.+++||+   .+++|+||||+|++++.++.+...++.......     ...+.+|.+                    
T Consensus       154 ~I~lvA~Lh~---~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~  230 (288)
T PF14531_consen  154 MIRLVANLHS---YGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFA  230 (288)
T ss_dssp             HHHHHHHHHH---TTEEEST-SGGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HH
T ss_pred             HHHHHHHHhh---cceEecccceeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeec
Confidence            4578899999   999999999999999999555544432111000     011111111                    


Q ss_pred             --------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCC
Q 039505          268 --------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRR  321 (342)
Q Consensus       268 --------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~R  321 (342)
                                    +|+.|++......        ..+..+ ..+. +.++.+..|+...++.+|.+|
T Consensus       231 ~DaW~LG~~ly~lWC~~lPf~~~~~~~--------~~~~~f-~~C~-~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  231 TDAWQLGITLYSLWCGRLPFGLSSPEA--------DPEWDF-SRCR-DMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             HHHHHHHHHHHHHHHSS-STCCCGGGS--------TSGGGG-TTSS----HHHHHHHHHHT-SSGGGS
T ss_pred             cCHHHHHHHHHHHHHccCCCCCCCccc--------cccccc-hhcC-CcCHHHHHHHHHHccCCcccC
Confidence                          7777777654332        011112 3344 667778899999999999987

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.65  E-value=3.2e-08  Score=99.60  Aligned_cols=35  Identities=17%  Similarity=0.302  Sum_probs=29.0

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC-CccccCC
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-SRISPVE  250 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-a~~~~~~  250 (342)
                      ++++|.|||+   .+++||||||+|||++++ .++.+++
T Consensus       437 i~~~L~~lH~---~giiHrDlkp~NILl~~~~~~liDFG  472 (535)
T PRK09605        437 VGEIVAKLHK---AGIVHGDLTTSNFIVRDDRLYLIDFG  472 (535)
T ss_pred             HHHHHHHHHh---CCCccCCCChHHEEEECCcEEEEeCc
Confidence            8899999999   999999999999999544 4444443

>PRK10345 hypothetical protein; Provisional

Probab=98.62  E-value=6.2e-08  Score=85.56  Aligned_cols=27  Identities=30%  Similarity=0.459  Sum_probs=23.5

Q ss_pred             ehhhh-hhhhccCCCCeeeCCCCcceEEecC
Q 039505          213 PKEGL-EYLHQGLKHPIIQRDMKSTNILLNE  242 (342)
Q Consensus       213 ia~gL-~yLH~~~~~~IiHrDlKp~NILLd~  242 (342)
                      ++.++ +|||+   .+|+||||||+|||++.
T Consensus       113 ~L~~l~~yLh~---~~IvhrDlKp~NILl~~  140 (210)
T PRK10345        113 LLKKLKRYLLD---NRIVTMELKPQNILCQR  140 (210)
T ss_pred             HHHHHHHHHHH---CCEeecCCCHHHEEEec
Confidence            34456 89999   99999999999999975

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.61  E-value=4e-08  Score=102.61  Aligned_cols=86  Identities=26%  Similarity=0.271  Sum_probs=59.9

Q ss_pred             HHHHHhhccC--cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCC----------Ccc--------------------E
Q 039505          155 LSLRVTNNFE--RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQG----------HVP--------------------I  201 (342)
Q Consensus       155 ~l~~at~~f~--~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~----------~~~--------------------L  201 (342)
                      +.+.....|.  ..||+|+||+||+|...++ .||+|+=+....-.          .+.                    |
T Consensus       692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~l  771 (974)
T KOG1166|consen  692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYICLQVMERLKPQMLPSIMHISSAHVFQNASVL  771 (974)
T ss_pred             eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceeeeehHHHHHhhchhhhcchHHHHHHHccCCccee
Confidence            3333344454  8999999999999999888 99999866543110          000                    2


Q ss_pred             E--EeeCC--------------cEEE-E---ehhhhhhhhccCCCCeeeCCCCcceEEecCC
Q 039505          202 V--ECHVG--------------ALIT-I---PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK  243 (342)
Q Consensus       202 v--~c~~~--------------~lv~-m---ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~  243 (342)
                      +  |..-|              .||. +   +++-++.||.   .+|||+||||.|.||...
T Consensus       772 v~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~---~~IIHgDiKPDNfll~~~  830 (974)
T KOG1166|consen  772 VSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHA---MGIIHGDIKPDNFLLRRE  830 (974)
T ss_pred             eeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHh---cceecccCCcceeEeecc
Confidence            2  32222              1222 1   7888999999   999999999999999865

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.51  E-value=6.8e-08  Score=99.88  Aligned_cols=154  Identities=21%  Similarity=0.232  Sum_probs=91.6

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc--------EE-EeeCCcEEEE------ehhhhhhhh
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP--------IV-ECHVGALITI------PKEGLEYLH  221 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~--------Lv-~c~~~~lv~m------ia~gL~yLH  221 (342)
                      ++|.  ++|..|+||.||..+++.+  .+|+ ++++...--...        ++ -|... +--|      .+.+++|||
T Consensus        83 ~df~~IklisngAygavylvrh~~trqrfa~-kiNkq~lilRnilt~a~npfvvgDc~tl-lk~~g~lPvdmvla~Eylh  160 (1205)
T KOG0606|consen   83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAM-KINKQNLILRNILTFAGNPFVVGDCATL-LKNIGPLPVDMVLAVEYLH  160 (1205)
T ss_pred             cccceeEeeccCCCCceeeeeccccccchhh-cccccchhhhccccccCCcceechhhhh-cccCCCCcchhhHHhHhhc
Confidence            5677  8999999999999999876  8888 444433111110        11 22211 0001      457899999


Q ss_pred             ccCCCCeeeCCCCcceEEecCCCccccCCCC---------------------Cc--cccccccCcceee-----------
Q 039505          222 QGLKHPIIQRDMKSTNILLNEKSRISPVEGG---------------------TH--MSTTIAGTAGFLN-----------  267 (342)
Q Consensus       222 ~~~~~~IiHrDlKp~NILLd~~a~~~~~~~~---------------------~~--~~~~~~Gt~~y~a-----------  267 (342)
                      +   .+|+|||+||.|.||+.-+++...+++                     ++  ....++||+.|+|           
T Consensus       161 ~---ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygk  237 (1205)
T KOG0606|consen  161 S---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGK  237 (1205)
T ss_pred             c---CCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCC
Confidence            9   999999999999999976222221111                     00  1133689999999           


Q ss_pred             ---------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCC
Q 039505          268 ---------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRP  322 (342)
Q Consensus       268 ---------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RP  322 (342)
                                     .|+.||+.+..+.   ++..-+-|...+.+.+.....++.+++...++.+|..|-
T Consensus       238 pvdwwamGiIlyeFLVgcvpffGdtpee---lfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rl  304 (1205)
T KOG0606|consen  238 PVDWWAMGIILYEFLVGCVPFFGDTPEE---LFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRL  304 (1205)
T ss_pred             CccHHHHHHHHHHHheeeeeccCCCHHH---HHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhc
Confidence                           5555655542211   111111111222222333344577777788899999994

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=98.49  E-value=2.6e-07  Score=84.84  Aligned_cols=79  Identities=24%  Similarity=0.396  Sum_probs=54.7

Q ss_pred             ccC--cccCcCCCeeEEEEEEC-CC-eEEEEEccCCCC--CCCcc---------------EE-EeeCC---cEEE-E---
Q 039505          162 NFE--RVPYKGGFITVYHGQLV-KS-EVAMKMLSPSSS--QGHVP---------------IV-ECHVG---ALIT-I---  212 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~-~~-~vAVK~l~~~~~--~~~~~---------------Lv-~c~~~---~lv~-m---  212 (342)
                      +|.  +.||+|+||+++.|+.- ++ +||||.=...+.  +-..|               +. |-.++   .||. +   
T Consensus        29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLLGP  108 (449)
T KOG1165|consen   29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLLGP  108 (449)
T ss_pred             cceeccccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhhCc
Confidence            454  89999999999999854 44 999997544332  22222               11 22222   4444 1   


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK  243 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~  243 (342)
                                              +..-++|+|+   +..|.|||||+|.||..-
T Consensus       109 SLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~---k~LIYRDIKPdNFLIGrp  160 (449)
T KOG1165|consen  109 SLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHE---KDLIYRDIKPDNFLIGRP  160 (449)
T ss_pred             CHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHh---cceeecccCccceeecCC
Confidence                                    4456799999   999999999999999865

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.44  E-value=2.5e-07  Score=82.56  Aligned_cols=81  Identities=17%  Similarity=0.169  Sum_probs=57.2

Q ss_pred             hccC--cccCcCCCeeEEEEEECCCeEEEEEccCCCCCCCc-------------c--------------EE--EeeC---
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGHV-------------P--------------IV--ECHV---  206 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~~vAVK~l~~~~~~~~~-------------~--------------Lv--~c~~---  206 (342)
                      ++|.  +++|.|+||.||......+.+|||.+.........             +              +.  ++..   
T Consensus        31 ~~y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~  110 (232)
T PRK10359         31 YNIKTIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERK  110 (232)
T ss_pred             CceEEEEEecCCCceEEEEEecCCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecccc
Confidence            4555  89999999999997653339999999754322111             1              11  1111   


Q ss_pred             -------CcEEE--E------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC
Q 039505          207 -------GALIT--I------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS  244 (342)
Q Consensus       207 -------~~lv~--m------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a  244 (342)
                             ..+++  +                  ++.+|..+|+   .+++|||+||+||+++.+.
T Consensus       111 ~~~~~~~~~lvmEyi~G~tL~~~~~~~~~~~~~i~~~l~~lH~---~gi~H~Dikp~Nili~~~g  172 (232)
T PRK10359        111 TLRYAHTYIMLIEYIEGVELNDMPEISEDVKAKIKASIESLHQ---HGMVSGDPHKGNFIVSKNG  172 (232)
T ss_pred             cccccCCeEEEEEEECCccHHHhhhccHHHHHHHHHHHHHHHH---cCCccCCCChHHEEEeCCC
Confidence                   13333  2                  7889999999   9999999999999998774

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=98.40  E-value=2.7e-07  Score=84.15  Aligned_cols=52  Identities=27%  Similarity=0.281  Sum_probs=37.8

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc-----ccccccCcceee
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM-----STTIAGTAGFLN  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~-----~~~~~Gt~~y~a  267 (342)
                      ++.|+.|||+   .+|+||||||+||++..+  .|+.+++.....     .+..+.|..|.|
T Consensus       127 ~~~~ik~lhs---~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~~mtpyVvtRyyra  185 (369)
T KOG0665|consen  127 MLCGIKHLHS---AGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDFMMTPYVVTRYYRA  185 (369)
T ss_pred             HHHHHHHHHh---cceeecccCcccceecchhheeeccchhhcccCcccccCchhheeeccC
Confidence            7889999999   999999999999999998  555554433221     122445556665

>PRK12274 serine/threonine protein kinase; Provisional

Probab=98.39  E-value=6.2e-07  Score=78.72  Aligned_cols=81  Identities=16%  Similarity=0.130  Sum_probs=56.1

Q ss_pred             cccCcCCCeeEEEEEECCCeEEEEEccCCCCCCC--------cc---------------EE-EeeCC-cEEE--E-----
Q 039505          165 RVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGH--------VP---------------IV-ECHVG-ALIT--I-----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~~vAVK~l~~~~~~~~--------~~---------------Lv-~c~~~-~lv~--m-----  212 (342)
                      ..|++|+||+||.+.-.+..++.+.++....-..        .|               ++ +  .+ ++++  +     
T Consensus         8 ~~l~~~~f~~v~~~~~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~--~~~~lvmeyI~G~~L   85 (218)
T PRK12274          8 EPLKSDTFGRILLVRGGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW--DGRHLDRSYLAGAAM   85 (218)
T ss_pred             eeecCCCcceEEEeecCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE--cCEEEEEeeecCccH
Confidence            7899999999997766444888777766543111        12               21 1  11 2232  1     


Q ss_pred             --------------ehhhhhhhhccCCCCeeeCCC-CcceEEecCCC--ccccCC
Q 039505          213 --------------PKEGLEYLHQGLKHPIIQRDM-KSTNILLNEKS--RISPVE  250 (342)
Q Consensus       213 --------------ia~gL~yLH~~~~~~IiHrDl-Kp~NILLd~~a--~~~~~~  250 (342)
                                    ++++|.++|+   .+|+|||| ||+|||++.+.  ++++++
T Consensus        86 ~~~~~~~~~~~~~qi~~~L~~lH~---~GIvHrDL~kp~NILv~~~g~i~LIDFG  137 (218)
T PRK12274         86 YQRPPRGDLAYFRAARRLLQQLHR---CGVAHNDLAKEANWLVQEDGSPAVIDFQ  137 (218)
T ss_pred             HhhhhhhhHHHHHHHHHHHHHHHH---CcCccCCCCCcceEEEcCCCCEEEEECC
Confidence                          6889999999   99999999 79999998774  444443

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=98.33  E-value=2e-07  Score=96.78  Aligned_cols=77  Identities=17%  Similarity=0.159  Sum_probs=56.9

Q ss_pred             CcccCcCCCeeEEEEEECCCeEEEEEccCCCCCCCcc------------EE----EeeCC---------cEEE------E
Q 039505          164 ERVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGHVP------------IV----ECHVG---------ALIT------I  212 (342)
Q Consensus       164 ~~~lG~G~fG~Vykg~~~~~~vAVK~l~~~~~~~~~~------------Lv----~c~~~---------~lv~------m  212 (342)
                      .+.||++.|=+|.+|+++.|.|+||++-+....-.-.            +.    +|.-.         ++|-      +
T Consensus        28 ~~~LGstRFlKv~r~k~~eG~vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqyvkhnL  107 (1431)
T KOG1240|consen   28 VENLGSTRFLKVARAKDREGLVVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQYVKHNL  107 (1431)
T ss_pred             ecccCchhhhhhhhccCCCceEEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHHHhhhh
Confidence            3899999999999999999999999987665332211            11    11100         1100      0


Q ss_pred             ---------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC
Q 039505          213 ---------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK  243 (342)
Q Consensus       213 ---------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~  243 (342)
                                           +..||.-+|.   .+|.|||||++|||++.=
T Consensus       108 yDRlSTRPFL~~iEKkWiaFQLL~al~qcH~---~gVcHGDIKsENILiTSW  156 (1431)
T KOG1240|consen  108 YDRLSTRPFLVLIEKKWIAFQLLKALSQCHK---LGVCHGDIKSENILITSW  156 (1431)
T ss_pred             hhhhccchHHHHHHHHHHHHHHHHHHHHHHH---cCccccccccceEEEeee
Confidence                                 8889999999   999999999999999974

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.32  E-value=8.3e-07  Score=87.03  Aligned_cols=32  Identities=34%  Similarity=0.504  Sum_probs=27.9

Q ss_pred             ccC-cccCcCCCeeEEEEEECCC-eEEEEEccCC
Q 039505          162 NFE-RVPYKGGFITVYHGQLVKS-EVAMKMLSPS  193 (342)
Q Consensus       162 ~f~-~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~  193 (342)
                      .|. +-||.|++|.||+|++.++ .||||+....
T Consensus       119 ~fd~~plasaSigQVh~A~l~~G~~VaVKv~rp~  152 (437)
T TIGR01982       119 EFEEKPLAAASIAQVHRARLVDGKEVAVKVLRPG  152 (437)
T ss_pred             hCCCcceeeeehhheEEEEecCCCEEEEEeeCCC
Confidence            344 7899999999999999988 9999998664

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.32  E-value=5.9e-07  Score=91.17  Aligned_cols=119  Identities=18%  Similarity=0.248  Sum_probs=75.6

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCC--------C--ccccccccCcceee-------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGG--------T--HMSTTIAGTAGFLN-------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~--------~--~~~~~~~Gt~~y~a-------------  267 (342)
                      +..|+.|+|+   .+|.|||+|++|++++.+  .++.+++..        .  .....++|+.+|+|             
T Consensus       429 L~~Gv~y~h~---~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~  505 (601)
T KOG0590|consen  429 LLRGVKYLHS---MGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRA  505 (601)
T ss_pred             HHHHHHHHHh---cCceeccCccccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcch
Confidence            8999999999   999999999999999998  444444322        1  23455789999998             


Q ss_pred             --------------cCCCCccccccccccccccccccc-ccC-CC--CCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          268 --------------TKNPVISKSIENGNSHLRDKSTVD-LSF-KG--EFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       268 --------------tG~~P~~~~~~~~~~~l~~~~~~d-~~l-~~--~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                                    +|+.|+........ ...+....+ ... .+  ......+.....++.++++.+|.+|-||.+|++
T Consensus       506 vDiwS~~ii~~~m~~~~~~Wk~a~~~~~-~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~  584 (601)
T KOG0590|consen  506 VDVWSCGIIYICMILGRFPWKVAKKSDN-SFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN  584 (601)
T ss_pred             hhhhhccceEEEEecCCCcccccccccc-chhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence                          56666554322210 000000000 000 00  011233455778888999999999999999984


Q ss_pred             --HHHhcc
Q 039505          330 --VREQGN  335 (342)
Q Consensus       330 --~L~~i~  335 (342)
                        +++.+.
T Consensus       585 d~W~~~i~  592 (601)
T KOG0590|consen  585 DEWIRSIE  592 (601)
T ss_pred             ChHhhhcc
Confidence              455543

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=98.29  E-value=1.3e-06  Score=76.47  Aligned_cols=79  Identities=29%  Similarity=0.354  Sum_probs=58.2

Q ss_pred             cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCC-CCcc------------------EE-EeeCC---cEEE--E-----
Q 039505          165 RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQ-GHVP------------------IV-ECHVG---ALIT--I-----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~-~~~~------------------Lv-~c~~~---~lv~--m-----  212 (342)
                      +.||+|++|.||+|...+ + .+|+|.+...... ..+.                  ++ ++...   .+++  +     
T Consensus         5 ~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L   84 (225)
T smart00221        5 KKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGGDL   84 (225)
T ss_pred             eEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCCCH
Confidence            789999999999999986 4 9999999865432 1111                  22 33222   2222  1     


Q ss_pred             ----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCcc
Q 039505          213 ----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI  246 (342)
Q Consensus       213 ----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~~  246 (342)
                                            +++++.|||.   .+++|+||+|+||+++.+.++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~di~~~ni~v~~~~~~  137 (225)
T smart00221       85 FDYLRKKGGKLSEEEARFYLRQILEALEYLHS---LGIVHRDLKPENILLGMDGLV  137 (225)
T ss_pred             HHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCE
Confidence                                  7889999999   899999999999999987433

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=98.24  E-value=1.7e-06  Score=78.00  Aligned_cols=29  Identities=21%  Similarity=0.364  Sum_probs=27.0

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCCC
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS  244 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a  244 (342)
                      ++++|.+||+   .+|+||||||.|||++.+.
T Consensus       151 i~~~l~~lH~---~GI~HrDlkp~NILv~~~~  179 (239)
T PRK01723        151 IGQLIARFHD---AGVYHADLNAHNILLDPDG  179 (239)
T ss_pred             HHHHHHHHHH---CCCCCCCCCchhEEEcCCC
Confidence            7899999999   9999999999999998764

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.23  E-value=2.8e-06  Score=69.33  Aligned_cols=79  Identities=19%  Similarity=0.168  Sum_probs=56.7

Q ss_pred             cccCcCCCeeEEEEEECCCeEEEEEccCCCC--CCCcc----------------EE-EeeCC---cEEE--E--------
Q 039505          165 RVPYKGGFITVYHGQLVKSEVAMKMLSPSSS--QGHVP----------------IV-ECHVG---ALIT--I--------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~~vAVK~l~~~~~--~~~~~----------------Lv-~c~~~---~lv~--m--------  212 (342)
                      +.||+|.++.||++...+..++||.......  ....+                ++ +....   ++++  +        
T Consensus         4 ~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~   83 (155)
T cd05120           4 KLLKGGLTNRVYLLGTKDEDYVLKINPSREKGADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLDEV   83 (155)
T ss_pred             eecccccccceEEEEecCCeEEEEecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeecccC
Confidence            5789999999999998766899999876542  11111                22 22221   2222  1        


Q ss_pred             -----------ehhhhhhhhccCCCCeeeCCCCcceEEecCC
Q 039505          213 -----------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK  243 (342)
Q Consensus       213 -----------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~  243 (342)
                                 ++++|+++|.....+++|+|+||+||+++++
T Consensus        84 ~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~  125 (155)
T cd05120          84 SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDG  125 (155)
T ss_pred             CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECC
Confidence                       7889999998544579999999999999875

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.02  E-value=1.8e-05  Score=66.70  Aligned_cols=85  Identities=15%  Similarity=0.085  Sum_probs=56.7

Q ss_pred             cccCcCCCeeEEEEEECCCeEEEEEccCCCCC--C-Ccc---------------EE-EeeCC-cEEE--E----------
Q 039505          165 RVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQ--G-HVP---------------IV-ECHVG-ALIT--I----------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~~vAVK~l~~~~~~--~-~~~---------------Lv-~c~~~-~lv~--m----------  212 (342)
                      +.++.|.++.||+++..++.+++|........  . ..+               ++ +.... .+++  +          
T Consensus         4 ~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~~~~lv~e~i~G~~l~~~~~   83 (170)
T cd05151           4 SPLKGGMTNKNYRVEVANKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFDPETGVLITEFIEGSELLTEDF   83 (170)
T ss_pred             eecCCcccCceEEEEECCeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEeCCCCeEEEEecCCCccccccc
Confidence            45788999999999987559999997655311  1 111               33 22212 4444  2          


Q ss_pred             --------ehhhhhhhhccC--CCCeeeCCCCcceEEecCC-CccccC
Q 039505          213 --------PKEGLEYLHQGL--KHPIIQRDMKSTNILLNEK-SRISPV  249 (342)
Q Consensus       213 --------ia~gL~yLH~~~--~~~IiHrDlKp~NILLd~~-a~~~~~  249 (342)
                              ++++|+.||...  ...++|+|++|.||+++++ .+++++
T Consensus        84 ~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~~~~~~liDf  131 (170)
T cd05151          84 SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLDDGRLWLIDW  131 (170)
T ss_pred             cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEECCeEEEEec
Confidence                    788999999832  2236999999999999854 344443

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=97.99  E-value=9e-06  Score=81.27  Aligned_cols=33  Identities=24%  Similarity=0.439  Sum_probs=28.6

Q ss_pred             hccC-cccCcCCCeeEEEEEECC-C-eEEEEEccCC
Q 039505          161 NNFE-RVPYKGGFITVYHGQLVK-S-EVAMKMLSPS  193 (342)
Q Consensus       161 ~~f~-~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~  193 (342)
                      ..|+ +-||+|++|.||+|++++ + .||||++.+.
T Consensus       120 ~~fd~~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~  155 (537)
T PRK04750        120 DDFDIKPLASASIAQVHFARLKDNGREVVVKVLRPD  155 (537)
T ss_pred             HhcChhhhcCCCccEEEEEEECCCCCEEEEEEeCcc
Confidence            4466 789999999999999987 6 9999999755

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=97.79  E-value=3.3e-06  Score=83.39  Aligned_cols=52  Identities=27%  Similarity=0.268  Sum_probs=40.4

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCCCccccCCCCCcc----ccccccCcceee
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTHM----STTIAGTAGFLN  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~~~~~~~~~~~----~~~~~Gt~~y~a  267 (342)
                      +|-+++++|.   .+|+|||+|++||+++.++.+...+++...    ....+||..|||
T Consensus       106 laLald~lh~---l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~eymA  161 (612)
T KOG0603|consen  106 LALALDHLHK---LGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTYEYRA  161 (612)
T ss_pred             HHHHHhhcch---hHHHHhcccccceeecccCccccCCchhhhHhHhhhhcccchhhhh
Confidence            7789999999   999999999999999999655444444321    122389999999

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=97.78  E-value=2.5e-05  Score=73.58  Aligned_cols=28  Identities=43%  Similarity=0.603  Sum_probs=25.3

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK  243 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~  243 (342)
                      +.+|+.|||.   ++|.|||+|+.|||+.-+
T Consensus       350 lLEav~hL~~---hgvAhRDlKSDNiL~Eld  377 (598)
T KOG4158|consen  350 LLEAVTHLHK---HGVAHRDLKSDNILLELD  377 (598)
T ss_pred             HHHHHHHHHH---ccchhhcccccceEEEec
Confidence            7889999999   999999999999997643

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=97.65  E-value=4.3e-05  Score=75.00  Aligned_cols=35  Identities=11%  Similarity=0.028  Sum_probs=30.3

Q ss_pred             HHHHHHHHHHcccccCCCCCCHHHHHHHHHhccCC
Q 039505          303 VGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNGS  337 (342)
Q Consensus       303 ~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~~  337 (342)
                      ...+..++..||..+|++||++.+|-..++.+...
T Consensus       193 ~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~  227 (484)
T KOG1023|consen  193 PPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG  227 (484)
T ss_pred             chHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence            34688999999999999999999999888877653

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=97.55  E-value=0.00022  Score=62.24  Aligned_cols=34  Identities=15%  Similarity=0.230  Sum_probs=26.3

Q ss_pred             ehhhhhhh-hccCCCCeeeCCCCcceEEecCC-CccccC
Q 039505          213 PKEGLEYL-HQGLKHPIIQRDMKSTNILLNEK-SRISPV  249 (342)
Q Consensus       213 ia~gL~yL-H~~~~~~IiHrDlKp~NILLd~~-a~~~~~  249 (342)
                      ++.+|..| |.   .++||+||++.|||++++ ..++++
T Consensus       133 i~~~l~~l~H~---~glVHGDLs~~NIL~~~~~v~iIDF  168 (197)
T cd05146         133 VLSMMKQLYKE---CNLVHADLSEYNMLWHDGKVWFIDV  168 (197)
T ss_pred             HHHHHHHHHHh---CCeecCCCCHHHEEEECCcEEEEEC
Confidence            66677777 77   899999999999999754 344443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=96.72  E-value=0.00077  Score=61.02  Aligned_cols=52  Identities=35%  Similarity=0.579  Sum_probs=38.2

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCCC---ccccCCCCCc------------cccccccCcceee
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS---RISPVEGGTH------------MSTTIAGTAGFLN  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a---~~~~~~~~~~------------~~~~~~Gt~~y~a  267 (342)
                      ++.++.|+|+   .+++|||+||+||+++...   ++.+++....            ......||..|++
T Consensus       110 ~~~~l~~~H~---~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~  176 (384)
T COG0515         110 ILSALEYLHS---KGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMA  176 (384)
T ss_pred             HHHHHHHHHh---CCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccccccccccccccccccCC
Confidence            7888999999   8899999999999999873   4444432210            1244678888887

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=96.57  E-value=0.0031  Score=62.94  Aligned_cols=36  Identities=25%  Similarity=0.287  Sum_probs=30.9

Q ss_pred             HhhccC-cccCcCCCeeEEEEEECCC-eEEEEEccCCC
Q 039505          159 VTNNFE-RVPYKGGFITVYHGQLVKS-EVAMKMLSPSS  194 (342)
Q Consensus       159 at~~f~-~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~  194 (342)
                      .-..|+ +-|+.++-|.||+|++++| .||||+..+.-
T Consensus       124 ~F~eF~~~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi  161 (517)
T COG0661         124 LFSEFEPEPIASASIAQVHRAVLKSGEEVAVKVQRPGI  161 (517)
T ss_pred             HHHHcCCCchhhhhHhhheeEEecCCCEEEEEecCCCh
Confidence            445566 8899999999999999988 99999987764

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=96.47  E-value=0.0009  Score=65.28  Aligned_cols=49  Identities=27%  Similarity=0.409  Sum_probs=34.1

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------------cccccccCcceee
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------------MSTTIAGTAGFLN  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------------~~~~~~Gt~~y~a  267 (342)
                      ++.|++|      ++.+|||+||.||....+  .++.+++..+.            ..+...||..||+
T Consensus       368 ~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~Yms  430 (516)
T KOG1033|consen  368 IAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMS  430 (516)
T ss_pred             hccchhh------ccchhhhccccccccccchhhhhhhhhheeecccCCcccchhhhhhhcccccccCC
Confidence            6677777      568999999999998877  34433332211            2234679999998

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=96.32  E-value=0.016  Score=49.85  Aligned_cols=82  Identities=17%  Similarity=0.222  Sum_probs=52.2

Q ss_pred             cccCcCCCeeEEEEEECCCeEEEEEccCCC-CCC-Ccc-------------------------EE-EeeCC--cEEE--E
Q 039505          165 RVPYKGGFITVYHGQLVKSEVAMKMLSPSS-SQG-HVP-------------------------IV-ECHVG--ALIT--I  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~~vAVK~l~~~~-~~~-~~~-------------------------Lv-~c~~~--~lv~--m  212 (342)
                      ..+++|+-+.+|.+.+.+.++.+|.=.... ... ..+                         .+ .+...  .+++  +
T Consensus         2 ~~i~~GAEa~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I   81 (204)
T COG3642           2 DLIKQGAEAIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI   81 (204)
T ss_pred             chhhCCcceeEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence            357899999999998866576666533221 111 000                         44 44333  2333  2


Q ss_pred             -------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-CccccC
Q 039505          213 -------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-SRISPV  249 (342)
Q Consensus       213 -------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-a~~~~~  249 (342)
                                         +-+-+.=||.   .+|+|+||.++||++..+ .-++++
T Consensus        82 ~G~~lkd~l~~~~~~~~r~vG~~vg~lH~---~givHGDLTtsNiIl~~~~i~~IDf  135 (204)
T COG3642          82 EGELLKDALEEARPDLLREVGRLVGKLHK---AGIVHGDLTTSNIILSGGRIYFIDF  135 (204)
T ss_pred             CChhHHHHHHhcchHHHHHHHHHHHHHHh---cCeecCCCccceEEEeCCcEEEEEC
Confidence                               4445667999   999999999999999876 334443

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=96.21  E-value=0.004  Score=64.61  Aligned_cols=28  Identities=7%  Similarity=-0.014  Sum_probs=24.1

Q ss_pred             HHHHHHHHHHcccccCCCCCCHHHHHHH
Q 039505          303 VGKAVEIAMASVSSKVNRRPLMNQVVMV  330 (342)
Q Consensus       303 ~~~l~~l~~~Cl~~~P~~RPsm~eV~~~  330 (342)
                      ...+.+++..||..+|.+||++.|+++.
T Consensus       607 ~~~~~~~l~~lL~~dP~~R~ta~e~l~h  634 (669)
T cd05610         607 SVNAQNAIEILLTMDPTKRAGLKELKQH  634 (669)
T ss_pred             CHHHHHHHHHHcccChhHCcCHHHHHhC
Confidence            4457788889999999999999999864

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=96.15  E-value=0.014  Score=50.27  Aligned_cols=28  Identities=36%  Similarity=0.506  Sum_probs=25.0

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK  243 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~  243 (342)
                      |-+.+.-||.   ..|||+||..+||+|..+
T Consensus       122 iG~~igklH~---ndiiHGDLTTSNill~~~  149 (229)
T KOG3087|consen  122 IGELIGKLHD---NDIIHGDLTTSNILLRSD  149 (229)
T ss_pred             HHHHHHHhhh---CCeecccccccceEEecC
Confidence            5567888999   999999999999999877

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=96.04  E-value=0.0027  Score=58.88  Aligned_cols=30  Identities=27%  Similarity=0.537  Sum_probs=28.2

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK  243 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~  243 (342)
                      |..||.|||+ |.++|+|+++...-|++..+
T Consensus       185 Ilsal~yLhs-~~PpiihgnlTc~tifiq~n  214 (458)
T KOG1266|consen  185 ILSALSYLHS-CDPPIIHGNLTCDTIFIQHN  214 (458)
T ss_pred             HHhhhhhhhc-cCCccccCCcchhheeecCC
Confidence            9999999999 78999999999999999877

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=96.03  E-value=0.0079  Score=59.59  Aligned_cols=80  Identities=21%  Similarity=0.290  Sum_probs=57.1

Q ss_pred             hccC--cccCcCCCeeEEEEEEC-CC--eEEEEEccCCCCCCCcc--------------------------------EE-
Q 039505          161 NNFE--RVPYKGGFITVYHGQLV-KS--EVAMKMLSPSSSQGHVP--------------------------------IV-  202 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~-~~--~vAVK~l~~~~~~~~~~--------------------------------Lv-  202 (342)
                      .+|.  ..||.|.|+.|++...+ .+  .+++|.+.........+                                .+ 
T Consensus       265 ~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip  344 (524)
T KOG0601|consen  265 TDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIP  344 (524)
T ss_pred             CCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCc
Confidence            3455  78999999999998765 23  89999886653322221                                12 


Q ss_pred             --EeeCC----cEEE--E------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC
Q 039505          203 --ECHVG----ALIT--I------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK  243 (342)
Q Consensus       203 --~c~~~----~lv~--m------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~  243 (342)
                        ||..+    ..+.  |            ++.++.++|+   +.++|+|+||+||++..+
T Consensus       345 ~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s---~~~~~~d~~psni~i~~~  402 (524)
T KOG0601|consen  345 LEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHS---KLFVHLDVKPSNILISND  402 (524)
T ss_pred             hhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccc---hhhhcccccccceeeccc
Confidence              55443    1111  1            8889999998   999999999999999985

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=95.80  E-value=0.045  Score=47.43  Aligned_cols=36  Identities=25%  Similarity=0.411  Sum_probs=23.6

Q ss_pred             ehhhhhh-hhccCCCCeeeCCCCcceEEecCCCccccCCCC
Q 039505          213 PKEGLEY-LHQGLKHPIIQRDMKSTNILLNEKSRISPVEGG  252 (342)
Q Consensus       213 ia~gL~y-LH~~~~~~IiHrDlKp~NILLd~~a~~~~~~~~  252 (342)
                      +.+.+.. +|.   .+|+|+|+.+.|||++++ ++...+++
T Consensus       115 il~~~~~~~~~---~givHGDLs~~NIlv~~~-~~~iIDf~  151 (188)
T PF01163_consen  115 ILEEIIKMLHK---AGIVHGDLSEYNILVDDG-KVYIIDFG  151 (188)
T ss_dssp             HHHHHHHHHHC---TTEEESS-STTSEEEETT-CEEE--GT
T ss_pred             HHHHHHHHHHh---cCceecCCChhhEEeecc-eEEEEecC
Confidence            3333444 467   899999999999999988 44443443

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=95.64  E-value=0.011  Score=53.87  Aligned_cols=31  Identities=23%  Similarity=0.054  Sum_probs=26.5

Q ss_pred             cCcccCcCCCeeEEEEEECCC-eEEEEEccCC
Q 039505          163 FERVPYKGGFITVYHGQLVKS-EVAMKMLSPS  193 (342)
Q Consensus       163 f~~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~  193 (342)
                      +.+.||-|.-+.||.|..+.+ ++|||.-...
T Consensus        95 iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~G  126 (304)
T COG0478          95 IGTKIGVGKESDVYVAIDPKGRKVAVKFHRLG  126 (304)
T ss_pred             hccccccCccceEEEEECCCCCEEEEEEeecC
Confidence            348999999999999999988 9999976543

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=95.29  E-value=0.013  Score=59.75  Aligned_cols=52  Identities=27%  Similarity=0.445  Sum_probs=37.3

Q ss_pred             ehhhhhhhh-ccCCCCeeeCCCCcceEEecCCC-ccccCCCCCc-----------ccccccc-Ccceee
Q 039505          213 PKEGLEYLH-QGLKHPIIQRDMKSTNILLNEKS-RISPVEGGTH-----------MSTTIAG-TAGFLN  267 (342)
Q Consensus       213 ia~gL~yLH-~~~~~~IiHrDlKp~NILLd~~a-~~~~~~~~~~-----------~~~~~~G-t~~y~a  267 (342)
                      +..|+.|+| +   .++.|||+||+|.+++... .+...+++.+           .....+| ++.|+|
T Consensus       132 l~s~l~~~H~~---~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a  197 (601)
T KOG0590|consen  132 LNSGLSYLHPE---NGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGA  197 (601)
T ss_pred             hccCccccCcc---cccccCCCCCccchhccCCCcccCCCchhhccccccCCcceeeecccCCCCCCCC
Confidence            668999999 6   8999999999999999874 3333222211           1122567 888888

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=95.25  E-value=0.019  Score=56.94  Aligned_cols=25  Identities=32%  Similarity=0.566  Sum_probs=24.1

Q ss_pred             hhhhhhccCCCCeeeCCCCcceEEecCC
Q 039505          216 GLEYLHQGLKHPIIQRDMKSTNILLNEK  243 (342)
Q Consensus       216 gL~yLH~~~~~~IiHrDlKp~NILLd~~  243 (342)
                      ||.++|+   ..++|-|+||.||++.++
T Consensus       234 al~~~hs---~~~~~~~~kp~~i~~~~~  258 (524)
T KOG0601|consen  234 ALSHLHS---NNIVHDDLKPANIFTTSD  258 (524)
T ss_pred             cccccCC---Ccccccccchhheecccc
Confidence            9999999   999999999999999988

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=95.12  E-value=0.11  Score=45.31  Aligned_cols=29  Identities=14%  Similarity=0.061  Sum_probs=24.5

Q ss_pred             cccCcCCCeeEEEEEECCC-eEEEEEccCC
Q 039505          165 RVPYKGGFITVYHGQLVKS-EVAMKMLSPS  193 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~  193 (342)
                      +.|+.|..+.||++...++ .+++|.....
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~   33 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPG   33 (223)
T ss_pred             eecCCCccceEEEEEecCCcceEEEeCCCc
Confidence            4688999999999998875 8999987654

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PLN03150 hypothetical protein; Provisional

Probab=94.14  E-value=0.02  Score=58.85  Aligned_cols=31  Identities=32%  Similarity=0.573  Sum_probs=19.9

Q ss_pred             CcchhhhcccchhhHhhhCCCccccCCCCcccc
Q 039505          113 PVPKFLSQLSSLKFLKRNLGRNKLTGPLPVELI  145 (342)
Q Consensus       113 ~ip~~l~~l~~L~~l~~~ls~N~l~g~ip~~~~  145 (342)
                      .+|++++.+++|+.|  ++++|+++|.+|..+.
T Consensus       457 ~iP~~~~~l~~L~~L--dLs~N~lsg~iP~~l~  487 (623)
T PLN03150        457 NIPPSLGSITSLEVL--DLSYNSFNGSIPESLG  487 (623)
T ss_pred             cCChHHhCCCCCCEE--ECCCCCCCCCCchHHh
Confidence            456666666666666  6677776666666543

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=94.06  E-value=0.026  Score=49.52  Aligned_cols=29  Identities=24%  Similarity=0.375  Sum_probs=26.5

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCCC
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS  244 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a  244 (342)
                      +++.+.-||.   .+|+|+|+++.|||++.+.
T Consensus       127 l~~~i~~lH~---~gi~H~Dl~~~NILv~~~~  155 (206)
T PF06293_consen  127 LARLIAKLHD---AGIYHGDLNPSNILVDPDD  155 (206)
T ss_pred             HHHHHHHHHH---CcCCCCCCCcccEEEeCCC
Confidence            7788899999   9999999999999999873

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=93.22  E-value=0.039  Score=50.58  Aligned_cols=27  Identities=22%  Similarity=0.186  Sum_probs=25.1

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecC
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNE  242 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~  242 (342)
                      +++.+.-||.   .+|+|+|++++|||++.
T Consensus       147 la~~i~~LH~---~Gi~HgDL~~~NiLl~~  173 (268)
T PRK15123        147 VATMVRDMHA---AGINHRDCYICHFLLHL  173 (268)
T ss_pred             HHHHHHHHHH---CcCccCCCChhhEEEec
Confidence            7788899999   99999999999999985

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=92.79  E-value=0.14  Score=51.33  Aligned_cols=35  Identities=20%  Similarity=0.298  Sum_probs=29.9

Q ss_pred             hhccC-cccCcCCCeeEEEEEECCC-eEEEEEccCCC
Q 039505          160 TNNFE-RVPYKGGFITVYHGQLVKS-EVAMKMLSPSS  194 (342)
Q Consensus       160 t~~f~-~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~  194 (342)
                      -..|+ +-||.-+.|.||+|+++++ .||||+-...-
T Consensus       161 f~~f~~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l  197 (538)
T KOG1235|consen  161 FSEFDEEPIAAASLAQVHRARLKNGEDVAVKVQHPGL  197 (538)
T ss_pred             HHhcCcchhhhcchhheEEEEecCCCEEEEEecCcCh
Confidence            34466 8899999999999999999 99999987654

>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B

Probab=90.90  E-value=0.12  Score=33.45  Aligned_cols=35  Identities=29%  Similarity=0.337  Sum_probs=27.6

Q ss_pred             EEeeeccCcCCCCCCCCCCCcchhhhcccchhhHhhhCCCccccC
Q 039505           94 RTTFIHGNYDEQNILPDFKPVPKFLSQLSSLKFLKRNLGRNKLTG  138 (342)
Q Consensus        94 r~~fl~gN~~~~~~pp~f~~ip~~l~~l~~L~~l~~~ls~N~l~g  138 (342)
                      +.+.+.+|.++        .+|+.+++|+.|+.+  ++++|+++.
T Consensus         4 ~~L~l~~N~i~--------~l~~~l~~l~~L~~L--~l~~N~i~~   38 (44)
T PF12799_consen    4 EELDLSNNQIT--------DLPPELSNLPNLETL--NLSNNPISD   38 (44)
T ss_dssp             SEEEETSSS-S--------SHGGHGTTCTTSSEE--EETSSCCSB
T ss_pred             eEEEccCCCCc--------ccCchHhCCCCCCEE--EecCCCCCC
Confidence            45566666544        688889999999999  999999883

...

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=89.76  E-value=0.13  Score=41.14  Aligned_cols=34  Identities=24%  Similarity=0.347  Sum_probs=29.4

Q ss_pred             hccC-cccCcCCCeeEEEEEECCC-eEEEEEccCCC
Q 039505          161 NNFE-RVPYKGGFITVYHGQLVKS-EVAMKMLSPSS  194 (342)
Q Consensus       161 ~~f~-~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~  194 (342)
                      ..|+ +-||.|+.|.||+|+++++ .||||+.....
T Consensus        12 ~~fd~~PlasASiaQVh~a~l~~g~~VaVKV~rP~i   47 (119)
T PF03109_consen   12 DEFDPEPLASASIAQVHRARLKDGEEVAVKVQRPGI   47 (119)
T ss_pred             HHCCcchhhheehhhheeeeecccchhhhhhcchHH
Confidence            4455 8899999999999999988 99999987654

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=87.20  E-value=0.8  Score=41.43  Aligned_cols=31  Identities=26%  Similarity=0.216  Sum_probs=25.0

Q ss_pred             cccCcCCCeeEEEEEECCC-eEEEEEccCCCC
Q 039505          165 RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSS  195 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~  195 (342)
                      ..|+.|.-+.||+|.-.++ .+|||++.....
T Consensus        54 g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~   85 (268)
T COG1718          54 GCISTGKEANVYLAETGDGRYVAVKIYRTSTS   85 (268)
T ss_pred             eeecCCcceEEEeeccCCCceEEEEEEehhhh
Confidence            4667788889999988767 999999976643

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=85.61  E-value=1.3  Score=45.39  Aligned_cols=30  Identities=20%  Similarity=0.577  Sum_probs=27.5

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCCC
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS  244 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a  244 (342)
                      ++.||.|+|..  .++||++|.|++|.++.++
T Consensus       108 v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~  137 (700)
T KOG2137|consen  108 VADGLAFLHRS--AKVVHGNIQPEAIVVNANG  137 (700)
T ss_pred             ccchhhhhccC--cceeecccchhheeeccCc
Confidence            78999999995  7899999999999999983

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=84.93  E-value=0.53  Score=41.86  Aligned_cols=33  Identities=27%  Similarity=0.388  Sum_probs=28.1

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC-Ccccc
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-SRISP  248 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-a~~~~  248 (342)
                      +++++.=||.   .|+.|+|..|+|++++++ -++++
T Consensus       144 i~~~ikqlH~---~G~~HGD~hpgNFlv~~~~i~iID  177 (229)
T PF06176_consen  144 IVEAIKQLHK---HGFYHGDPHPGNFLVSNNGIRIID  177 (229)
T ss_pred             HHHHHHHHHH---cCCccCCCCcCcEEEECCcEEEEE
Confidence            6678889999   999999999999999987 44444

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=83.06  E-value=3.8  Score=40.00  Aligned_cols=123  Identities=11%  Similarity=0.111  Sum_probs=70.3

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCCCccccCCCCCc-------cccccccCcceee------------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH-------MSTTIAGTAGFLN------------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~~~~~~~~~~-------~~~~~~Gt~~y~a------------------  267 (342)
                      +|.+.+-||+   .+-+-+|+.++|+|+.+++++...+..+.       .....+|...|.+                  
T Consensus       126 lA~aFA~lH~---~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~h  202 (637)
T COG4248         126 LASAFATLHE---HGHVVGDVNQNSFLVSDDSKVVLVDSDSFQINANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANH  202 (637)
T ss_pred             HHHHHHHHHh---cCCcccccCccceeeecCceEEEEcccceeeccCCceEecccCccccCCHHHhccccccccCCCccc
Confidence            7888889999   89999999999999999965543322211       1112456666665                  


Q ss_pred             --------------cCCCCcccccc-----cccc-ccccccccc-----ccC---CCCCChHH-HHHHHHHHHHccccc-
Q 039505          268 --------------TKNPVISKSIE-----NGNS-HLRDKSTVD-----LSF---KGEFDIIS-VGKAVEIAMASVSSK-  317 (342)
Q Consensus       268 --------------tG~~P~~~~~~-----~~~~-~l~~~~~~d-----~~l---~~~~~~~~-~~~l~~l~~~Cl~~~-  317 (342)
                                    -|+.||.+..-     ...+ .+......+     +.+   +.+++.+. ...+-.+-.+|+... 
T Consensus       203 D~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~  282 (637)
T COG4248         203 DNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESG  282 (637)
T ss_pred             cchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccC
Confidence                          55788765321     1111 111100111     111   11222221 223445555777543 


Q ss_pred             -CCCCCCHHHHHHHHHhccCCC
Q 039505          318 -VNRRPLMNQVVMVREQGNGSR  338 (342)
Q Consensus       318 -P~~RPsm~eV~~~L~~i~~~~  338 (342)
                       +.-|||.+..+..|.+++.+.
T Consensus       283 ~~~~RP~a~aW~aAl~al~~~L  304 (637)
T COG4248         283 VATPRPTAKAWVAALDALRQQL  304 (637)
T ss_pred             CCCCCCCHHHHHHHHHHHHHhh
Confidence             678999999988888776543

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=81.18  E-value=0.65  Score=50.27  Aligned_cols=27  Identities=41%  Similarity=0.678  Sum_probs=14.8

Q ss_pred             cchhhhcccchhhHhhhCCCccccCCCCc
Q 039505          114 VPKFLSQLSSLKFLKRNLGRNKLTGPLPV  142 (342)
Q Consensus       114 ip~~l~~l~~L~~l~~~ls~N~l~g~ip~  142 (342)
                      +|..+..+++|+.+  ++++|+++|.+|.
T Consensus       563 ~p~~l~~l~~L~~l--~ls~N~l~~~~p~  589 (968)
T PLN00113        563 IPKNLGNVESLVQV--NISHNHLHGSLPS  589 (968)
T ss_pred             CChhHhcCcccCEE--eccCCcceeeCCC
Confidence            45555555555555  5555555555554

>PRK09902 hypothetical protein; Provisional

Probab=80.01  E-value=0.93  Score=40.04  Aligned_cols=28  Identities=7%  Similarity=0.004  Sum_probs=25.9

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK  243 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~  243 (342)
                      +++.+.=||.   .++.|+|+-+.|||++.+
T Consensus       137 va~~ia~LH~---~Gv~Hgdly~khIll~~~  164 (216)
T PRK09902        137 VALAFKKMHS---VNRQHGCCYVRHIYVKTE  164 (216)
T ss_pred             HHHHHHHHHH---CCCcCCCCCHhheeecCC
Confidence            8899999999   999999999999999844

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	342
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	7e-22
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	1e-05
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	2e-16
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	1e-15
3soc_A	322	Activin receptor type-2A; structural genomics cons	7e-08
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	2e-06
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	3e-06
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	3e-06
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	7e-06
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	2e-05
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	2e-05
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	3e-05
3aln_A	327	Dual specificity mitogen-activated protein kinase;	3e-05
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	4e-05
3fme_A	290	Dual specificity mitogen-activated protein kinase;	4e-05
2dyl_A	318	Dual specificity mitogen-activated protein kinase	4e-05
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	6e-05
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	7e-05
3an0_A	340	Dual specificity mitogen-activated protein kinase;	7e-05
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	7e-05
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	7e-05
3rgz_A	768	Protein brassinosteroid insensitive 1; phytohormon	1e-04
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	2e-04
3q4u_A	301	Activin receptor type-1; structural genomics conso	2e-04
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-04
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	3e-04
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	3e-04
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	4e-04
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	4e-04
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	5e-04
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	7e-04
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	7e-04
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	8e-04
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	8e-04

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 93.4 bits (233), Expect = 7e-22
 Identities = 38/160 (23%), Positives = 58/160 (36%), Gaps = 50/160 (31%)

Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEK----------SRISPVEGGTHMSTTIAGTAGF 265
           GL YLH      II RD+KS NILL+E           S+       TH+ST + GT G+
Sbjct: 151 GLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGY 207

Query: 266 ----------LNTKN----------------PVISKSIENGNSHLRD-----------KS 288
                     L  K+                  I +S+     +L +           + 
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQ 267

Query: 289 TVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVV 328
            VD +   +    S+ K  + A+  ++     RP M  V+
Sbjct: 268 IVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 45.7 bits (109), Expect = 1e-05
 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 3/42 (7%)

Query: 160 TNNF--ERVPYKGGFITVYHGQLV-KSEVAMKMLSPSSSQGH 198
           TNNF  + +   G F  VY G L   ++VA+K  +P SSQG 
Sbjct: 38  TNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGI 79

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 77.2 bits (191), Expect = 2e-16
 Identities = 33/163 (20%), Positives = 61/163 (37%), Gaps = 49/163 (30%)

Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEK----------SRISPVEGGTHMSTTIAGTAGF 265
           G+ +LH+   +  I RD+KS NILL+E           +R S     T M++ I GT  +
Sbjct: 145 GINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAY 201

Query: 266 ---------LNTKNPVIS------------KSIENGNS----------HLRDKST----V 290
                    +  K+ + S             +++                 ++ T    +
Sbjct: 202 MAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYI 261

Query: 291 DLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQ 333
           D     + D  SV     +A   +  K N+RP + +V  + ++
Sbjct: 262 DKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 303

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 75.7 bits (187), Expect = 1e-15
 Identities = 35/163 (21%), Positives = 59/163 (36%), Gaps = 50/163 (30%)

Query: 215 EGLEYLHQGLKHPIIQRDMKSTNILLNEK----------SRISPVEGGTHMSTTIAGTAG 264
            GL YLH      II RD+K+ NILL+E+          +++      TH++T + GT G
Sbjct: 142 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHVTTAVRGTIG 200

Query: 265 F----------LNTKNPVIS------------KSIENGNSHLRDKST------------- 289
                       + K  V              ++ +       D                
Sbjct: 201 HIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 260

Query: 290 ----VDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVV 328
               VD+  +G +    V + +++A+    S    RP M++VV
Sbjct: 261 LEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVV 303

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 52.4 bits (126), Expect = 7e-08
 Identities = 32/166 (19%), Positives = 46/166 (27%), Gaps = 71/166 (42%)

Query: 169 KGGFITVYHGQLVKSEVAMKMLSPSSSQGHVPIVECH-------------VGA------- 208
           +G F  V+  QL+   VA+K+      Q      E +             +GA       
Sbjct: 34  RGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSV 93

Query: 209 -----LIT----------------------------IPKEGLEYLHQ-------GLKHPI 228
                LIT                            + + GL YLH+       G K  I
Sbjct: 94  DVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMAR-GLAYLHEDIPGLKDGHKPAI 152

Query: 229 IQRDMKSTNILLNEK----------SRISPVEGGTHMSTTIAGTAG 264
             RD+KS N+LL             +           +    GT  
Sbjct: 153 SHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRR 198

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 47.6 bits (114), Expect = 2e-06
 Identities = 28/138 (20%), Positives = 39/138 (28%), Gaps = 53/138 (38%)

Query: 169 KGGFITVYHGQLVKSEVAMKMLSPSSSQGHVPIVE------------CH------VGALI 210
            GGF  VY    +  EVA+K       +     +E             H       G  +
Sbjct: 17  IGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCL 76

Query: 211 TIPK-----------------------------------EGLEYLHQGLKHPIIQRDMKS 235
             P                                     G+ YLH     PII RD+KS
Sbjct: 77  KEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKS 136

Query: 236 TNILLNEKSRISPVEGGT 253
           +NIL+ +K     +    
Sbjct: 137 SNILILQKVENGDLSNKI 154

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 47.3 bits (113), Expect = 3e-06
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 8/55 (14%)

Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPV-------EGGTHMSTTIAGTA 263
           G+ YLH      +I RD+K  N+LL     +  +       +  THM T   G+A
Sbjct: 114 GVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM-TNNKGSA 167

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 47.3 bits (113), Expect = 3e-06
 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 13/57 (22%)

Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEK----------SRISPVEGGTHMSTTIAGT 262
           G+ YLH     PI+ R++KS N+L+++K          SR+      +  S    GT
Sbjct: 149 GMNYLHN-RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAA--GT 202

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 45.8 bits (109), Expect = 7e-06
 Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 11/57 (19%)

Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEG-----G-----THMSTTIAGT 262
           G+EY+      PI+ RD++S NI L      +PV       G      H  + + G 
Sbjct: 134 GIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGN 189

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 44.8 bits (106), Expect = 2e-05
 Identities = 24/135 (17%), Positives = 37/135 (27%), Gaps = 61/135 (45%)

Query: 169 KGGFITVYHGQLVKSEVAMKMLSPSSSQG--------------HVPIVECHVGALITIPK 214
           +G +  VY G L +  VA+K+ S ++ Q               H  I    +     +  
Sbjct: 23  RGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARF-IVGDERVTA 81

Query: 215 E----------------------------------------GLEYLHQ------GLKHPI 228
           +                                        GL YLH         K  I
Sbjct: 82  DGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAI 141

Query: 229 IQRDMKSTNILLNEK 243
             RD+ S N+L+   
Sbjct: 142 SHRDLNSRNVLVKND 156

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 13/58 (22%)

Query: 215 EGLEYLHQGLKHPIIQRDMKSTNILLNEK----------SRISPVEGGTHMSTTIAGT 262
            G++YLH      II RD+KS NI L+E           +       G+H    ++G+
Sbjct: 131 RGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGS 185

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 44.3 bits (105), Expect = 3e-05
 Identities = 13/58 (22%), Positives = 20/58 (34%), Gaps = 12/58 (20%)

Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEK---------SRISPVEGGTHMSTTIAGTAG 264
           G+ YLH      I+ +D+KS N+  +             IS V         +    G
Sbjct: 142 GMGYLHA---KGILHKDLKSKNVFYDNGKVVITDFGLFSISGVLQAGRREDKLRIQNG 196

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 43.8 bits (104), Expect = 3e-05
 Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 13/83 (15%)

Query: 172 FITVYHGQLVK-SEVAMKM----------LSPSSSQGHVPIVECHVGALITIPKEGLEYL 220
           +I  ++G L +  +  + M               S     I E  +G +     + L +L
Sbjct: 82  YIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHL 141

Query: 221 HQGLKHPIIQRDMKSTNILLNEK 243
            + LK  II RD+K +NILL+  
Sbjct: 142 KENLK--IIHRDIKPSNILLDRS 162

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 43.8 bits (104), Expect = 4e-05
 Identities = 7/31 (22%), Positives = 17/31 (54%), Gaps = 1/31 (3%)

Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
           G+ +LH  L+  I +  + S +++++E    
Sbjct: 123 GMAFLH-TLEPLIPRHALNSRSVMIDEDMTA 152

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 43.8 bits (104), Expect = 4e-05
 Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 12/82 (14%)

Query: 172 FITVYHGQLVK-SEVAMKM---------LSPSSSQGHVPIVECHVGALITIPKEGLEYLH 221
           F   ++G L +  +V + M                    I E  +G +     + LE+LH
Sbjct: 67  FTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH 126

Query: 222 QGLKHPIIQRDMKSTNILLNEK 243
              K  +I RD+K +N+L+N  
Sbjct: 127 S--KLSVIHRDVKPSNVLINAL 146

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 43.9 bits (104), Expect = 4e-05
 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 9/82 (10%)

Query: 172 FITVYHGQLVK-SEVAMKM------LSPSSSQGHVPIVECHVGALITIPKEGLEYLHQGL 224
           +I    G  +  ++V + M            +   PI E  +G +     + L YL +  
Sbjct: 85  YIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKE-- 142

Query: 225 KHPIIQRDMKSTNILLNEKSRI 246
           KH +I RD+K +NILL+E+ +I
Sbjct: 143 KHGVIHRDVKPSNILLDERGQI 164

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 43.2 bits (102), Expect = 6e-05
 Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 18/86 (20%)

Query: 172 FITVYHGQLVKSE---VAMKMLSPSSSQGHVPIVECHVGAL----I-TIPKE---GLEYL 220
               Y G  ++     + M+    S+S     ++E H   L    I  +      GL YL
Sbjct: 115 NTIQYRGCYLREHTAWLVMEYCLGSASD----LLEVHKKPLQEVEIAAVTHGALQGLAYL 170

Query: 221 HQGLKHPIIQRDMKSTNILLNEKSRI 246
           H    H +I RD+K+ NILL+E   +
Sbjct: 171 H---SHNMIHRDVKAGNILLSEPGLV 193

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 43.3 bits (102), Expect = 7e-05
 Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 9/82 (10%)

Query: 172 FITVYHGQLVKSE---VAMKMLSPSS----SQGHVPIVECHVGALITIPKEGLEYLHQGL 224
           +I  ++G         + M+ +   S     +    I E  +G +     +GL YL +  
Sbjct: 92  YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 151

Query: 225 KHPIIQRDMKSTNILLNEKSRI 246
           K  I+ RD+K +NIL+N +  I
Sbjct: 152 K--IMHRDVKPSNILVNSRGEI 171

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 43.2 bits (102), Expect = 7e-05
 Identities = 28/132 (21%), Positives = 42/132 (31%), Gaps = 59/132 (44%)

Query: 169 KGGFITVYHGQLVKSEVAMKMLSPSSSQG--------------HVPIVECHVGA------ 208
           KG F  V+ G+    EVA+K+ S    +               H  I+   + A      
Sbjct: 52  KGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGF-IAADNKDNG 110

Query: 209 ------LIT----------------IPKE-----------GLEYLHQ-----GLKHPIIQ 230
                 L++                +  E           GL +LH        K  I  
Sbjct: 111 TWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAH 170

Query: 231 RDMKSTNILLNE 242
           RD+KS NIL+ +
Sbjct: 171 RDLKSKNILVKK 182

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 43.1 bits (102), Expect = 7e-05
 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 9/59 (15%)

Query: 187 MKMLSPSSSQGHVPIVECHVGALITIPKE---GLEYLHQGLKHPIIQRDMKSTNILLNE 242
           +K +          + E  +    TI +E   GLEYLH   K+  I RD+K+ NILL E
Sbjct: 104 IKHIVAKGEHKSGVLDESTIA---TILREVLEGLEYLH---KNGQIHRDVKAGNILLGE 156

>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768

 Score = 43.0 bits (102), Expect = 1e-04
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 6/53 (11%)

Query: 113 PVPKFLSQLSSLKFLKRNLGRNKLTGPLPVELIGKQKN-NALELSLRVTNNFE 164
            VP F    S L+ L   L  N  +G LP++ + K +    L+LS    N F 
Sbjct: 309 AVPPFFGSCSLLESL--ALSSNNFSGELPMDTLLKMRGLKVLDLS---FNEFS 356

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 9/81 (11%)

Query: 172 FITVYHGQLVKSE---VAMKMLSPSSSQG---HVPIVECHVGALITIPKEGLEYLHQGLK 225
           ++T Y+G  +K     + M+ L   S+       P+ E  +  ++    +GL+YLH    
Sbjct: 81  YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLH---S 137

Query: 226 HPIIQRDMKSTNILLNEKSRI 246
              I RD+K+ N+LL+E   +
Sbjct: 138 EKKIHRDIKAANVLLSEHGEV 158

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 5/32 (15%)

Query: 216 GLEYLH-----QGLKHPIIQRDMKSTNILLNE 242
           GL +LH        K  I  RD+KS NIL+ +
Sbjct: 117 GLAHLHIEIFGTQGKPAIAHRDLKSKNILVKK 148

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 5/32 (15%)

Query: 216 GLEYLH-----QGLKHPIIQRDMKSTNILLNE 242
           GL +LH        K  I  RD+KS NIL+ +
Sbjct: 146 GLCHLHTEIFSTQGKPAIAHRDLKSKNILVKK 177

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 41.2 bits (97), Expect = 3e-04
 Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 11/83 (13%)

Query: 172 FITVYHGQLVKSE---VAMKMLSPSS-----SQGHVPIVECHVGALITIPKEGLEYLHQG 223
            +  Y+G   K+    + M+     S        +  + E  +  ++    +GLEYLH  
Sbjct: 85  HVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH-- 142

Query: 224 LKHPIIQRDMKSTNILLNEKSRI 246
                I RD+K+ NILLN +   
Sbjct: 143 -FMRKIHRDIKAGNILLNTEGHA 164

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 40.8 bits (96), Expect = 4e-04
 Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 9/81 (11%)

Query: 172 FITVYHGQLVKSE---VAMKMLSPSSSQ---GHVPIVECHVGALITIPKEGLEYLHQGLK 225
            I  Y    +  +   V M+ L+  S         + E  + A+     + LE+LH    
Sbjct: 78  NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH---S 134

Query: 226 HPIIQRDMKSTNILLNEKSRI 246
           + +I RD+KS NILL     +
Sbjct: 135 NQVIHRDIKSDNILLGMDGSV 155

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 40.4 bits (95), Expect = 5e-04
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 3/49 (6%)

Query: 198 HVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
            V + E  +  +     + L YLH      +I RD+KS +ILL    R+
Sbjct: 135 QVRLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDGRV 180

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 39.9 bits (94), Expect = 7e-04
 Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 10/59 (16%)

Query: 215 EGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI-------SPVEGGTHMSTTIAGTAGFL 266
           E +  LH   K  I+ RD+K  NILL++   I       S           + GT  +L
Sbjct: 135 EVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYL 190

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 39.9 bits (94), Expect = 7e-04
 Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 14/59 (23%)

Query: 216 GLEYLHQ--GLKHPIIQRDMKSTNILLNEK----------SRISPVEGGTHMSTTIAGT 262
            L+  H+     H ++ RD+K  N+ L+ K          +RI  +   T  + T  GT
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDTSFAKTFVGT 179

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 39.6 bits (93), Expect = 8e-04
 Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 3/30 (10%)

Query: 215 EGLEYLHQGLKHPIIQRDMKSTNILLNEKS 244
           EGL+YLH    + I+ RD+K  N+L+N  S
Sbjct: 133 EGLKYLHD---NQIVHRDIKGDNVLINTYS 159

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 39.6 bits (93), Expect = 8e-04
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 3/32 (9%)

Query: 215 EGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
           E L +LH      II RD+K+ N+L+  +  I
Sbjct: 128 EALNFLHS---KRIIHRDLKAGNVLMTLEGDI 156

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	342
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.96
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.95
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.94
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.94
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.94
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.93
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.93
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.92
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.92
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.91
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.91
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.91
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.91
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.91
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.89
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.89
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.89
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.87
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.87
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.87
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.86
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.86
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.86
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.85
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.85
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.85
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.85
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.85
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.85
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.85
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.84
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.84
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.84
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.84
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.84
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.84
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.84
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.84
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.84
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.84
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.84
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.83
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.83
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.83
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.83
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.83
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.83
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.83
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.83
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.83
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.83
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.83
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.83
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.82
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.82
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.82
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.82
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.82
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.82
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.82
3niz_A	311	Rhodanese family protein; structural genomics, str	99.82
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.82
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.82
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.82
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.82
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.82
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.82
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.82
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.81
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.81
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.81
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.81
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.81
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.81
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.81
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.81
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.81
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.81
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.81
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.81
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.81
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.81
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.81
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.81
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.81
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.8
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.8
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.8
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.8
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.8
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.8
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.8
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.8
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.8
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.8
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.8
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.8
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.8
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.8
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.8
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.8
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.8
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.8
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.8
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.8
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.8
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.8
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.8
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.79
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.79
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.79
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.79
3uqc_A	286	Probable conserved transmembrane protein; structur	99.79
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.79
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.79
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.79
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.79
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.79
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.79
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.79
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.79
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.79
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.79
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.79
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.79
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.79
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.79
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.79
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.79
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.79
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.79
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.79
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.79
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.79
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.79
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.78
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.78
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.78
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.78
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.78
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.78
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.78
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.78
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.78
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.78
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.78
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.78
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.78
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.78
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.78
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.78
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.78
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.78
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.78
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.78
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.78
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.78
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.78
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.78
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.78
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.78
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.78
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.78
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.78
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.77
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.77
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.77
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.77
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.77
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.77
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.77
3bhy_A	283	Death-associated protein kinase 3; death associate	99.77
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.77
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.77
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.77
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.77
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.77
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.77
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.77
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.77
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.77
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.77
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.77
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.77
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.77
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.77
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.77
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.77
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.77
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.77
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.77
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.77
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.77
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.76
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.76
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.76
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.76
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.76
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.76
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.76
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.76
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.76
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.76
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.76
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.76
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.76
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.76
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.76
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.76
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.76
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.76
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.76
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.76
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.75
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.75
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.75
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.75
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.75
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.75
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.74
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.74
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.74
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.74
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.74
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.74
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.74
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.74
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.74
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.74
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.74
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.74
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.74
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.73
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.73
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.73
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.73
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.73
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.73
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.72
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.72
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.72
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.72
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.71
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.7
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.7
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.69
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.69
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.67
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.64
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.6
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.23
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.22
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.18
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.05
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.02
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	97.32
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	96.93
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	96.36
3rgz_A	768	Protein brassinosteroid insensitive 1; phytohormon	95.82
3rgz_A	768	Protein brassinosteroid insensitive 1; phytohormon	94.98
4fcg_A	328	Uncharacterized protein; structural genomics, PSI-	94.5
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	92.99
4b8c_D	727	Glucose-repressible alcohol dehydrogenase transcr	92.03
4fcg_A	328	Uncharacterized protein; structural genomics, PSI-	91.9
2jwp_A	174	Malectin, MGC80075; sugar binding, sugar binding p	91.25
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	91.2
4ecn_A	876	Leucine-rich repeat protein; leucine-rich repeats,	90.64
2ifg_A	347	High affinity nerve growth factor receptor; TRK, T	89.08
1ogq_A	313	PGIP-2, polygalacturonase inhibiting protein; inhi	89.02
1ogq_A	313	PGIP-2, polygalacturonase inhibiting protein; inhi	88.34
1w8a_A	192	SLIT protein; signaling protein, secreted protein,	87.8
1dce_A	567	Protein (RAB geranylgeranyltransferase alpha subun	87.77
1dce_A	567	Protein (RAB geranylgeranyltransferase alpha subun	87.71
4eco_A	636	Uncharacterized protein; leucine-rich repeats, pro	87.57
4b8c_D	727	Glucose-repressible alcohol dehydrogenase transcr	86.69
2r9u_A	174	Variable lymphocyte receptor; adaptive immunity, V	86.27
2wfh_A	193	SLIT homolog 2 protein C-product; developmental pr	83.64
3g39_A	170	Variable lymphocyte receptor VLRB.2D; antibody, X-	83.46
2v70_A	220	SLIT-2, SLIT homolog 2 protein N-product; neurogen	81.68
3e6j_A	229	Variable lymphocyte receptor diversity region; var	81.52
1w8a_A	192	SLIT protein; signaling protein, secreted protein,	80.21

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.96  E-value=4.4e-29  Score=231.68  Aligned_cols=170  Identities=23%  Similarity=0.254  Sum_probs=123.4

Q ss_pred             cccCcCCCeeEEEEEECCCeEEEEEccCCCCCCCc------c--------------EE-EeeCC--cEEE--E-------
Q 039505          165 RVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGHV------P--------------IV-ECHVG--ALIT--I-------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~~vAVK~l~~~~~~~~~------~--------------Lv-~c~~~--~lv~--m-------  212 (342)
                      +.||+|+||+||+|++.+ .||||+++........      |              ++ +|.++  ++|+  +       
T Consensus        42 ~~iG~G~fG~Vy~~~~~~-~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~iVmEy~~gGsL~~  120 (307)
T 3omv_A           42 TRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYK  120 (307)
T ss_dssp             EECCCCSSSEEEEEESSS-EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEECCSSCBHHH
T ss_pred             eEEeeCCCcEEEEEEECC-cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECCeEEEEEEcCCCCCHHH
Confidence            889999999999998765 6999999754322111      1              55 77665  5555  2       


Q ss_pred             --------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc--------cccccccC
Q 039505          213 --------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH--------MSTTIAGT  262 (342)
Q Consensus       213 --------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~--------~~~~~~Gt  262 (342)
                                          ||+||+|||+   ++||||||||+||||+++  +|+.+++.+..        .....+||
T Consensus       121 ~l~~~~~~l~~~~~~~i~~qia~gL~yLH~---~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT  197 (307)
T 3omv_A          121 HLHVQETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGS  197 (307)
T ss_dssp             HHHTSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCSSSEEEETTEEEEECCCSSCBC------------CCCC
T ss_pred             HHhhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeecccccC
Confidence                                8999999999   999999999999999998  66766664421        12346899


Q ss_pred             cceee-----------------------------cCCCCcccccccc-cccccccccccccCCCCCChHHHHHHHHHHHH
Q 039505          263 AGFLN-----------------------------TKNPVISKSIENG-NSHLRDKSTVDLSFKGEFDIISVGKAVEIAMA  312 (342)
Q Consensus       263 ~~y~a-----------------------------tG~~P~~~~~~~~-~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~  312 (342)
                      +.|||                             ||+.||....... ....+......|.+ ...+.+++..+.+++.+
T Consensus       198 ~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~l~~li~~  276 (307)
T 3omv_A          198 VLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDL-SKLYKNCPKAMKRLVAD  276 (307)
T ss_dssp             TTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCS-TTSCTTSCHHHHHHHHH
T ss_pred             CCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCc-ccccccchHHHHHHHHH
Confidence            99999                             9999997654321 11111123333333 22344556678999999


Q ss_pred             cccccCCCCCCHHHHHHHHHhccCCCC
Q 039505          313 SVSSKVNRRPLMNQVVMVREQGNGSRI  339 (342)
Q Consensus       313 Cl~~~P~~RPsm~eV~~~L~~i~~~~~  339 (342)
                      ||+.+|++||||.||++.|+.++.+..
T Consensus       277 cl~~dP~~RPs~~ei~~~Le~l~~~lp  303 (307)
T 3omv_A          277 CVKKVKEERPLFPQILSSIELLQHSLP  303 (307)
T ss_dssp             HTCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred             HcCCCHhHCcCHHHHHHHHHHHhccCC
Confidence            999999999999999999999887643

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.95  E-value=4.3e-29  Score=232.13  Aligned_cols=169  Identities=15%  Similarity=0.149  Sum_probs=119.7

Q ss_pred             HhhccCcccCcCCCeeEEEEEEC------CC-eEEEEEccCCCCCCCcc-------------------EE-EeeCC---c
Q 039505          159 VTNNFERVPYKGGFITVYHGQLV------KS-EVAMKMLSPSSSQGHVP-------------------IV-ECHVG---A  208 (342)
Q Consensus       159 at~~f~~~lG~G~fG~Vykg~~~------~~-~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~---~  208 (342)
                      .+-.|.+.||+|+||+||+|++.      .+ .||||+++........+                   ++ +|...   +
T Consensus        26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~  105 (308)
T 4gt4_A           26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS  105 (308)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence            34456689999999999999974      23 89999997654333222                   33 44433   3


Q ss_pred             EEE--E------------------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-
Q 039505          209 LIT--I------------------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-  243 (342)
Q Consensus       209 lv~--m------------------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-  243 (342)
                      +|+  +                                          ||+||+|||+   .+||||||||+||||+++ 
T Consensus       106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLK~~NILl~~~~  182 (308)
T 4gt4_A          106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATRNVLVYDKL  182 (308)
T ss_dssp             EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGG
T ss_pred             EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCccccceEECCCC
Confidence            333  1                                          8999999999   999999999999999998 


Q ss_pred             -CccccCCCCCc--------cccccccCcceee--------------------------c-CCCCccccccccccccccc
Q 039505          244 -SRISPVEGGTH--------MSTTIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDK  287 (342)
Q Consensus       244 -a~~~~~~~~~~--------~~~~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~  287 (342)
                       +|+.+++....        .....+||+.|||                          | |+.||.......   ++. 
T Consensus       183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~---~~~-  258 (308)
T 4gt4_A          183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD---VVE-  258 (308)
T ss_dssp             CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHH---HHH-
T ss_pred             CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHH---HHH-
Confidence             66666654322        1233679999999                          7 899998654322   111 


Q ss_pred             ccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhcc
Q 039505          288 STVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       288 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                      .+.+ ....+.+.+++..+.+++.+||+.+|++||||.||++.|+...
T Consensus       259 ~i~~-~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~  305 (308)
T 4gt4_A          259 MIRN-RQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG  305 (308)
T ss_dssp             HHHT-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred             HHHc-CCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence            1111 1112234456677899999999999999999999999999764

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.94  E-value=3.3e-28  Score=228.19  Aligned_cols=165  Identities=15%  Similarity=0.134  Sum_probs=115.7

Q ss_pred             cccCcCCCeeEEEEEECC------C-eEEEEEccCCCCCCCcc------------------EE-EeeCC---cEEE--E-
Q 039505          165 RVPYKGGFITVYHGQLVK------S-EVAMKMLSPSSSQGHVP------------------IV-ECHVG---ALIT--I-  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~------~-~vAVK~l~~~~~~~~~~------------------Lv-~c~~~---~lv~--m-  212 (342)
                      +.||+|+||+||+|++.+      + .||||+++.......++                  ++ +|.++   ++|+  + 
T Consensus        47 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~  126 (329)
T 4aoj_A           47 WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMR  126 (329)
T ss_dssp             EEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred             EEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCC
Confidence            889999999999999753      3 89999997653222111                  34 44443   3333  1 


Q ss_pred             ----------------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCC
Q 039505          213 ----------------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVE  250 (342)
Q Consensus       213 ----------------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~  250 (342)
                                                              ||+||+|||+   ++||||||||+||||+++  +|+.+++
T Consensus       127 ~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLKp~NILl~~~~~~Ki~DFG  203 (329)
T 4aoj_A          127 HGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGLVVKIGDFG  203 (329)
T ss_dssp             TCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEECCCC
T ss_pred             CCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHhhEEECCCCcEEEcccc
Confidence                                                    8999999999   999999999999999998  6666665


Q ss_pred             CCCc--------cccccccCcceee--------------------------c-CCCCcccccccccccccccccccccCC
Q 039505          251 GGTH--------MSTTIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFK  295 (342)
Q Consensus       251 ~~~~--------~~~~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~  295 (342)
                      ....        ......||+.|||                          | |+.||.......   ++. .+.. ...
T Consensus       204 la~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~---~~~-~i~~-g~~  278 (329)
T 4aoj_A          204 MSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE---AID-CITQ-GRE  278 (329)
T ss_dssp             ----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHH---HHH-HHHH-TCC
T ss_pred             cceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHH---HHH-HHHc-CCC
Confidence            4321        1234679999999                          7 899998654322   111 0111 111


Q ss_pred             CCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccCC
Q 039505          296 GEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNGS  337 (342)
Q Consensus       296 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~~  337 (342)
                      .+.+..++.++.+++.+||+.||++||||.||++.|+.+.+.
T Consensus       279 ~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~  320 (329)
T 4aoj_A          279 LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA  320 (329)
T ss_dssp             CCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             CCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence            122344556789999999999999999999999999998654

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.94  E-value=8.6e-28  Score=222.95  Aligned_cols=173  Identities=18%  Similarity=0.207  Sum_probs=116.3

Q ss_pred             cccCcCCCeeEEEEEECCCeEEEEEccCCCCCCCc---c--------------EE-EeeCC-------cEEE--E-----
Q 039505          165 RVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGHV---P--------------IV-ECHVG-------ALIT--I-----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~~vAVK~l~~~~~~~~~---~--------------Lv-~c~~~-------~lv~--m-----  212 (342)
                      +.||+|+||+||+|++.+..||||+++........   +              ++ +|...       ++|+  |     
T Consensus         9 ~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL   88 (303)
T 3hmm_A            9 ESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSL   88 (303)
T ss_dssp             EEEEECSSSEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBH
T ss_pred             EEEeeCCCeEEEEEEECCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCCcH
Confidence            78999999999999996559999999654211100   0              55 55432       4555  2     


Q ss_pred             --------------------ehhhhhhhhccC-----CCCeeeCCCCcceEEecCC--CccccCCCCCc----------c
Q 039505          213 --------------------PKEGLEYLHQGL-----KHPIIQRDMKSTNILLNEK--SRISPVEGGTH----------M  255 (342)
Q Consensus       213 --------------------ia~gL~yLH~~~-----~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~----------~  255 (342)
                                          +|+||+|||+.+     .++||||||||+|||||++  +|+.+++....          .
T Consensus        89 ~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~  168 (303)
T 3hmm_A           89 FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIA  168 (303)
T ss_dssp             HHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEESCC
T ss_pred             HHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCCCceeee
Confidence                                899999999842     3599999999999999988  66666654321          1


Q ss_pred             ccccccCcceee--------------------------------cCCCCcccccccc--ccccc------c-------cc
Q 039505          256 STTIAGTAGFLN--------------------------------TKNPVISKSIENG--NSHLR------D-------KS  288 (342)
Q Consensus       256 ~~~~~Gt~~y~a--------------------------------tG~~P~~~~~~~~--~~~l~------~-------~~  288 (342)
                      ....+||++|||                                ||++|+.......  ...+.      .       .+
T Consensus       169 ~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  248 (303)
T 3hmm_A          169 PNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQ  248 (303)
T ss_dssp             -----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTS
T ss_pred             cccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcc
Confidence            123579999999                                7776654332111  00000      0       22


Q ss_pred             cccccCCCCC-ChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccCC
Q 039505          289 TVDLSFKGEF-DIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNGS  337 (342)
Q Consensus       289 ~~d~~l~~~~-~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~~  337 (342)
                      ..+|.++... ..+++..+.+++.+||+.||++||||.||++.|+++.+.
T Consensus       249 ~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~  298 (303)
T 3hmm_A          249 KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             cCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence            2333333221 235667889999999999999999999999999998654

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.94  E-value=3.6e-28  Score=224.94  Aligned_cols=165  Identities=15%  Similarity=0.169  Sum_probs=115.7

Q ss_pred             cccCcCCCeeEEEEEECC------C-eEEEEEccCCCCCCCcc------------------EE-EeeCC---cEEE--E-
Q 039505          165 RVPYKGGFITVYHGQLVK------S-EVAMKMLSPSSSQGHVP------------------IV-ECHVG---ALIT--I-  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~------~-~vAVK~l~~~~~~~~~~------------------Lv-~c~~~---~lv~--m-  212 (342)
                      +.||+|+||+||+|++.+      + .||||+++....+..++                  ++ +|.++   ++|+  + 
T Consensus        19 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~   98 (299)
T 4asz_A           19 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMK   98 (299)
T ss_dssp             EEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred             eEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEcCC
Confidence            889999999999999752      3 79999997654222111                  44 45443   3333  2 


Q ss_pred             --------------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCC
Q 039505          213 --------------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGG  252 (342)
Q Consensus       213 --------------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~  252 (342)
                                                            ||+||+|||+   ++||||||||+||||+++  +|+.+++..
T Consensus        99 ~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDlKp~NILl~~~~~~Ki~DFGla  175 (299)
T 4asz_A           99 HGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKIGDFGMS  175 (299)
T ss_dssp             TCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCSCH
T ss_pred             CCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccCHhhEEECCCCcEEECCcccc
Confidence                                                  8999999999   999999999999999988  666665543


Q ss_pred             Cc--------cccccccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCC
Q 039505          253 TH--------MSTTIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGE  297 (342)
Q Consensus       253 ~~--------~~~~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~  297 (342)
                      ..        ......||+.|||                          | |+.||.......   +.. .+.... ..+
T Consensus       176 ~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~---~~~-~i~~~~-~~~  250 (299)
T 4asz_A          176 RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE---VIE-CITQGR-VLQ  250 (299)
T ss_dssp             HHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH---HHH-HHHHTC-CCC
T ss_pred             eecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH---HHH-HHHcCC-CCC
Confidence            21        1123579999999                          7 899998754322   111 111111 112


Q ss_pred             CChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccCC
Q 039505          298 FDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNGS  337 (342)
Q Consensus       298 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~~  337 (342)
                      .+..++.++.+++.+||+.+|++||||.||++.|+.+.+.
T Consensus       251 ~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~  290 (299)
T 4asz_A          251 RPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA  290 (299)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence            3344556789999999999999999999999999987653

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.93  E-value=2.5e-26  Score=215.35  Aligned_cols=162  Identities=15%  Similarity=0.168  Sum_probs=113.3

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc--------------EE-EeeCC---cEEE--E----------
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP--------------IV-ECHVG---ALIT--I----------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~--------------Lv-~c~~~---~lv~--m----------  212 (342)
                      +.||+|+||+||+|++..+  .||||+++..... .+|              ++ ++.++   ++|+  +          
T Consensus        64 ~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~-~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~  142 (336)
T 4g3f_A           64 PRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIK  142 (336)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-THHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHH
T ss_pred             cEeccCCCeEEEEEEECCCCCEEEEEEECHHHhH-HHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHHHH
Confidence            7899999999999998755  9999999865432 122              33 34333   3443  2          


Q ss_pred             ----------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC---CccccCCCCCcc-----------ccccccC
Q 039505          213 ----------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK---SRISPVEGGTHM-----------STTIAGT  262 (342)
Q Consensus       213 ----------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~---a~~~~~~~~~~~-----------~~~~~Gt  262 (342)
                                      +++||+|||+   .+||||||||+||||+.+   .|+.+++.....           ...++||
T Consensus       143 ~~~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT  219 (336)
T 4g3f_A          143 QMGCLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGT  219 (336)
T ss_dssp             HHSSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------------CCCCCC
T ss_pred             HcCCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCCccccC
Confidence                            8999999999   999999999999999976   355555543211           1235799


Q ss_pred             cceee--------------------------cCCCCccccccccc-ccccccccccccCCCCCChHHHHHHHHHHHHccc
Q 039505          263 AGFLN--------------------------TKNPVISKSIENGN-SHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVS  315 (342)
Q Consensus       263 ~~y~a--------------------------tG~~P~~~~~~~~~-~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~  315 (342)
                      +.|||                          ||+.||........ ..+....   +.+ .+.+......+.+++.+||+
T Consensus       220 ~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~---~~~-~~~~~~~s~~~~~li~~~L~  295 (336)
T 4g3f_A          220 ETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEP---PPI-REIPPSCAPLTAQAIQEGLR  295 (336)
T ss_dssp             GGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSC---CGG-GGSCTTSCHHHHHHHHHHTC
T ss_pred             ccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCC---CCc-hhcCccCCHHHHHHHHHHcc
Confidence            99999                          99999986543321 0111111   100 11233344568899999999


Q ss_pred             ccCCCCCCHHHHHHHHHhc
Q 039505          316 SKVNRRPLMNQVVMVREQG  334 (342)
Q Consensus       316 ~~P~~RPsm~eV~~~L~~i  334 (342)
                      .||++|||+.|+++.|...
T Consensus       296 ~dP~~R~sa~el~~~l~~~  314 (336)
T 4g3f_A          296 KEPVHRASAMELRRKVGKA  314 (336)
T ss_dssp             SSGGGSCCHHHHHHHHHHH
T ss_pred             CCHhHCcCHHHHHHHHHHH
Confidence            9999999999998877654

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.93  E-value=5.4e-26  Score=214.95  Aligned_cols=169  Identities=15%  Similarity=0.193  Sum_probs=117.9

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC-------eEEEEEccCCCCCCCcc--------------------EE-EeeCC---
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS-------EVAMKMLSPSSSQGHVP--------------------IV-ECHVG---  207 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~-------~vAVK~l~~~~~~~~~~--------------------Lv-~c~~~---  207 (342)
                      ++|.  +.||+|+||+||+|.+...       .||||+++........+                    ++ +|.+.   
T Consensus        64 ~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~  143 (353)
T 4ase_A           64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP  143 (353)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSC
T ss_pred             HHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCE
Confidence            3454  8999999999999987532       69999997654322111                    44 55432   


Q ss_pred             -cEEE--E------------------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecC
Q 039505          208 -ALIT--I------------------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNE  242 (342)
Q Consensus       208 -~lv~--m------------------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~  242 (342)
                       ++|+  +                                          ||+||+|||+   ++||||||||+||||++
T Consensus       144 ~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~---~~iiHRDLK~~NILl~~  220 (353)
T 4ase_A          144 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSE  220 (353)
T ss_dssp             CEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECG
T ss_pred             EEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhh---CCeecCccCccceeeCC
Confidence             3443  2                                          7899999999   99999999999999998


Q ss_pred             C--CccccCCCCCc--------cccccccCcceee--------------------------c-CCCCccccccccccccc
Q 039505          243 K--SRISPVEGGTH--------MSTTIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLR  285 (342)
Q Consensus       243 ~--a~~~~~~~~~~--------~~~~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~  285 (342)
                      +  +|+.+++.+..        .....+||+.|||                          | |+.||.......  .+.
T Consensus       221 ~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~--~~~  298 (353)
T 4ase_A          221 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFC  298 (353)
T ss_dssp             GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH--HHH
T ss_pred             CCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHH--HHH
Confidence            8  56665543321        2234689999999                          6 999998654222  111


Q ss_pred             ccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccC
Q 039505          286 DKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNG  336 (342)
Q Consensus       286 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~  336 (342)
                      .  .+........+..+..++.+++.+||+.||++||||.||++.|+.+-+
T Consensus       299 ~--~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq  347 (353)
T 4ase_A          299 R--RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  347 (353)
T ss_dssp             H--HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             H--HHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence            1  111111122233445668899999999999999999999999988744

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.92  E-value=4e-26  Score=210.14  Aligned_cols=159  Identities=23%  Similarity=0.326  Sum_probs=107.0

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc------c--------------EE-EeeC---C----cEEE--E
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV------P--------------IV-ECHV---G----ALIT--I  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~------~--------------Lv-~c~~---~----~lv~--m  212 (342)
                      ++||+|+||+||+|.+..+  .||||++.........      |              ++ ++..   +    ++|+  +
T Consensus        32 ~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~  111 (290)
T 3fpq_A           32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELM  111 (290)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred             eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCC
Confidence            6799999999999999765  9999999754322111      1              33 3321   1    3333  2


Q ss_pred             --------------------------ehhhhhhhhccCCCC--eeeCCCCcceEEecC-C--CccccCCCCC----cccc
Q 039505          213 --------------------------PKEGLEYLHQGLKHP--IIQRDMKSTNILLNE-K--SRISPVEGGT----HMST  257 (342)
Q Consensus       213 --------------------------ia~gL~yLH~~~~~~--IiHrDlKp~NILLd~-~--a~~~~~~~~~----~~~~  257 (342)
                                                |++||+|||+   .+  ||||||||+||||+. +  .|+.+++.+.    ....
T Consensus       112 ~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~---~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~~~  188 (290)
T 3fpq_A          112 TSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK  188 (290)
T ss_dssp             CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBE
T ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCCccC
Confidence                                      8999999998   55  999999999999985 4  5566655432    1234


Q ss_pred             ccccCcceee-------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHH
Q 039505          258 TIAGTAGFLN-------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMA  312 (342)
Q Consensus       258 ~~~Gt~~y~a-------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~  312 (342)
                      ..+||+.|||                         ||+.||.......  .+.. .+.....+...+.....++.+++.+
T Consensus       189 ~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~--~~~~-~i~~~~~~~~~~~~~~~~~~~li~~  265 (290)
T 3fpq_A          189 AVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAA--QIYR-RVTSGVKPASFDKVAIPEVKEIIEG  265 (290)
T ss_dssp             ESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH--HHHH-HHTTTCCCGGGGGCCCHHHHHHHHH
T ss_pred             CcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHH--HHHH-HHHcCCCCCCCCccCCHHHHHHHHH
Confidence            4789999999                         9999997543221  1111 1111111111122233458899999


Q ss_pred             cccccCCCCCCHHHHHH
Q 039505          313 SVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       313 Cl~~~P~~RPsm~eV~~  329 (342)
                      ||+.||++|||+.|+++
T Consensus       266 ~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          266 CIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             HSCSSGGGSCCHHHHHT
T ss_pred             HccCChhHCcCHHHHhc
Confidence            99999999999999975

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.92  E-value=1.6e-25  Score=210.54  Aligned_cols=159  Identities=16%  Similarity=0.127  Sum_probs=110.9

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc------------------EE-EeeCC---cEEE--E------
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP------------------IV-ECHVG---ALIT--I------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~------------------Lv-~c~~~---~lv~--m------  212 (342)
                      +.||+|+||+||+|++..+  .||||+++.......+.                  ++ ++...   ++|+  +      
T Consensus        80 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~  159 (346)
T 4fih_A           80 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT  159 (346)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEHH
T ss_pred             EEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHH
Confidence            7899999999999999754  99999997654333221                  33 33332   3443  1      


Q ss_pred             -------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------cccccccCcce
Q 039505          213 -------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIAGTAGF  265 (342)
Q Consensus       213 -------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~Gt~~y  265 (342)
                                         +++||+|||+   .+||||||||+||||+.+  .|+.+++....      .....+||+.|
T Consensus       160 ~~l~~~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~Y  236 (346)
T 4fih_A          160 DIVTHTRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYW  236 (346)
T ss_dssp             HHHHHSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGG
T ss_pred             HHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccccccCcCc
Confidence                               8999999999   999999999999999988  45555554321      22457899999


Q ss_pred             ee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCC
Q 039505          266 LN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVN  319 (342)
Q Consensus       266 ~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~  319 (342)
                      ||                          ||+.||...........+ .+...+.+  .........+.+++.+||+.||+
T Consensus       237 mAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i-~~~~~~~~--~~~~~~s~~~~dli~~~L~~dP~  313 (346)
T 4fih_A          237 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPRL--KNLHKVSPSLKGFLDRLLVRDPA  313 (346)
T ss_dssp             CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH-HHSSCCCC--SCGGGSCHHHHHHHHHHSCSSTT
T ss_pred             CCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH-HcCCCCCC--CccccCCHHHHHHHHHHcCCChh
Confidence            99                          999999765432200101 11111112  11233445688999999999999


Q ss_pred             CCCCHHHHHH
Q 039505          320 RRPLMNQVVM  329 (342)
Q Consensus       320 ~RPsm~eV~~  329 (342)
                      +|||+.|+++
T Consensus       314 ~R~ta~e~l~  323 (346)
T 4fih_A          314 QRATAAELLK  323 (346)
T ss_dssp             TSCCHHHHTT
T ss_pred             HCcCHHHHhc
Confidence            9999999975

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.91  E-value=3.1e-25  Score=202.63  Aligned_cols=160  Identities=16%  Similarity=0.209  Sum_probs=100.9

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-------c--------------EE-EeeCC---cEEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-------P--------------IV-ECHVG---ALIT  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-------~--------------Lv-~c~~~---~lv~  211 (342)
                      ++|.  +.||+|+||+||+|+...+  .||||+++........       |              +. ++...   ++|+
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            4666  8999999999999998654  9999999765322211       1              33 33332   3333


Q ss_pred             --E-------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-----ccc
Q 039505          212 --I-------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-----MST  257 (342)
Q Consensus       212 --m-------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-----~~~  257 (342)
                        +                         ++.||+|||+   .+|+||||||+|||++++  .++.+++.+..     ...
T Consensus        93 Ey~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~  169 (275)
T 3hyh_A           93 EYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLK  169 (275)
T ss_dssp             ECCCEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTCCEEECCSSCC----------
T ss_pred             eCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCChHHeEECCCCCEEEeecCCCeecCCCCccC
Confidence              1                         8999999999   999999999999999988  45555554422     123


Q ss_pred             ccccCcceee---------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHH
Q 039505          258 TIAGTAGFLN---------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIA  310 (342)
Q Consensus       258 ~~~Gt~~y~a---------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~  310 (342)
                      ..+||+.|||                           ||+.||.......   +.+ .+.....  ..+......+.+++
T Consensus       170 ~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~---~~~-~i~~~~~--~~p~~~s~~~~~li  243 (275)
T 3hyh_A          170 TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV---LFK-NISNGVY--TLPKFLSPGAAGLI  243 (275)
T ss_dssp             -----CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHH-HHHHTCC--CCCTTSCHHHHHHH
T ss_pred             CeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHH---HHH-HHHcCCC--CCCCCCCHHHHHHH
Confidence            4789999999                           9999997643221   111 1111111  11222344578899


Q ss_pred             HHcccccCCCCCCHHHHHH
Q 039505          311 MASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       311 ~~Cl~~~P~~RPsm~eV~~  329 (342)
                      .+||+.||++|||+.|+++
T Consensus       244 ~~~L~~dP~~R~s~~eil~  262 (275)
T 3hyh_A          244 KRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             HHHSCSSGGGSCCHHHHHH
T ss_pred             HHHccCChhHCcCHHHHHc
Confidence            9999999999999999986

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.91  E-value=2.5e-25  Score=209.64  Aligned_cols=160  Identities=15%  Similarity=0.165  Sum_probs=104.1

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc------c--------------EE-EeeCC---cEEE--
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV------P--------------IV-ECHVG---ALIT--  211 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~------~--------------Lv-~c~~~---~lv~--  211 (342)
                      +|.  +.||+|+||+||+|+...+  .||||+++........      |              ++ ++.+.   ++|+  
T Consensus        25 ~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy  104 (350)
T 4b9d_A           25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDY  104 (350)
T ss_dssp             CEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             ceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeC
Confidence            455  8999999999999998754  9999999765432211      1              22 22222   2222  


Q ss_pred             E----------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc------
Q 039505          212 I----------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM------  255 (342)
Q Consensus       212 m----------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~------  255 (342)
                      +                            |+.||+|||+   .+||||||||+||||+++  .|+.+++.....      
T Consensus       105 ~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~  181 (350)
T 4b9d_A          105 CEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVEL  181 (350)
T ss_dssp             CTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHH
T ss_pred             CCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCCEEEcccccceeecCCccc
Confidence            1                            8999999999   999999999999999988  455554433221      


Q ss_pred             ccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHH
Q 039505          256 STTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEI  309 (342)
Q Consensus       256 ~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l  309 (342)
                      ....+||+.|||                          ||+.||.......   +. ..+..... ...+.....++.++
T Consensus       182 ~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~---~~-~~i~~~~~-~~~~~~~s~~~~~l  256 (350)
T 4b9d_A          182 ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKN---LV-LKIISGSF-PPVSLHYSYDLRSL  256 (350)
T ss_dssp             HHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HH-HHHHHTCC-CCCCTTSCHHHHHH
T ss_pred             ccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH---HH-HHHHcCCC-CCCCccCCHHHHHH
Confidence            234689999999                          9999998654322   11 11111111 11122334568899


Q ss_pred             HHHcccccCCCCCCHHHHHH
Q 039505          310 AMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       310 ~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      +.+||+.||++|||+.|+++
T Consensus       257 i~~~L~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          257 VSQLFKRNPRDRPSVNSILE  276 (350)
T ss_dssp             HHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHccCChhHCcCHHHHhc
Confidence            99999999999999999975

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.91  E-value=1.1e-24  Score=209.96  Aligned_cols=162  Identities=16%  Similarity=0.136  Sum_probs=112.6

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc------------------EE-EeeCC---cEEE--E-
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP------------------IV-ECHVG---ALIT--I-  212 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~------------------Lv-~c~~~---~lv~--m-  212 (342)
                      .|.  +.||+|+||+||+|++..+  .||||+++.......+.                  ++ ++..+   ++|+  + 
T Consensus       152 ~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~  231 (423)
T 4fie_A          152 YLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE  231 (423)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             hcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCC
Confidence            355  7899999999999999765  99999998665433322                  33 23222   3333  1 


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------cccccc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIA  260 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~  260 (342)
                                              +++||+|||+   .+||||||||+||||+.+  .|+.+++....      .....+
T Consensus       232 gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~---~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~  308 (423)
T 4fie_A          232 GGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLV  308 (423)
T ss_dssp             TEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCCCE
T ss_pred             CCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEecCccceECCCCCccccccc
Confidence                                    8999999999   999999999999999988  45555554321      224578


Q ss_pred             cCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcc
Q 039505          261 GTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASV  314 (342)
Q Consensus       261 Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl  314 (342)
                      ||+.|||                          ||+.||...........+ .....+.+.  ........+.+++.+||
T Consensus       309 GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i-~~~~~~~~~--~~~~~s~~~~dli~~~L  385 (423)
T 4fie_A          309 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPRLK--NLHKVSPSLKGFLDRLL  385 (423)
T ss_dssp             ECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH-HHSCCCCCS--CTTSSCHHHHHHHHHHS
T ss_pred             cCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH-HcCCCCCCc--ccccCCHHHHHHHHHHc
Confidence            9999999                          999999765432210111 111112221  12223455889999999


Q ss_pred             cccCCCCCCHHHHHH
Q 039505          315 SSKVNRRPLMNQVVM  329 (342)
Q Consensus       315 ~~~P~~RPsm~eV~~  329 (342)
                      +.||++|||+.|+++
T Consensus       386 ~~dP~~R~ta~ell~  400 (423)
T 4fie_A          386 VRDPAQRATAAELLK  400 (423)
T ss_dssp             CSSTTTSCCHHHHTT
T ss_pred             CCChhHCcCHHHHhc
Confidence            999999999999975

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.91  E-value=4e-25  Score=205.01  Aligned_cols=157  Identities=22%  Similarity=0.283  Sum_probs=108.9

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCC---CCCCc----c--------------EE-EeeCC---cEEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSS---SQGHV----P--------------IV-ECHVG---ALIT  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~---~~~~~----~--------------Lv-~c~~~---~lv~  211 (342)
                      ++|.  ++||+|+||+||+|+...+  .||||++++..   ....+    |              +. +..+.   ++|+
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            4576  8999999999999998765  99999996432   11111    1              33 22222   3333


Q ss_pred             --E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-------
Q 039505          212 --I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-------  254 (342)
Q Consensus       212 --m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-------  254 (342)
                        +                          ++.||+|||+   .+||||||||+||||+++  .|+.+++....       
T Consensus       112 Ey~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~  188 (311)
T 4aw0_A          112 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ  188 (311)
T ss_dssp             CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC
T ss_pred             ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc
Confidence              1                          8999999999   999999999999999988  45555544321       


Q ss_pred             -cccccccCcceee--------------------------cCCCCcccccccccccccccccc--cccCCCCCChHHHHH
Q 039505          255 -MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTV--DLSFKGEFDIISVGK  305 (342)
Q Consensus       255 -~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~--d~~l~~~~~~~~~~~  305 (342)
                       .....+||+.|||                          ||+.||.......   +.. .+.  +..+    +.....+
T Consensus       189 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~---~~~-~i~~~~~~~----p~~~s~~  260 (311)
T 4aw0_A          189 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGL---IFA-KIIKLEYDF----PEKFFPK  260 (311)
T ss_dssp             CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHH-HHHHTCCCC----CTTCCHH
T ss_pred             ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHH-HHHcCCCCC----CcccCHH
Confidence             1234789999999                          9999998654322   111 111  1122    2223445


Q ss_pred             HHHHHHHcccccCCCCCCHHHHH
Q 039505          306 AVEIAMASVSSKVNRRPLMNQVV  328 (342)
Q Consensus       306 l~~l~~~Cl~~~P~~RPsm~eV~  328 (342)
                      +.+++.+||+.||++|||+.|+.
T Consensus       261 ~~dli~~lL~~dp~~R~t~~e~~  283 (311)
T 4aw0_A          261 ARDLVEKLLVLDATKRLGCEEME  283 (311)
T ss_dssp             HHHHHHHHSCSSGGGSTTSGGGT
T ss_pred             HHHHHHHHccCCHhHCcChHHHc
Confidence            88999999999999999998863

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.91  E-value=4.1e-24  Score=198.85  Aligned_cols=189  Identities=28%  Similarity=0.415  Sum_probs=135.2

Q ss_pred             ccCCCCCHHHHHHHhhccC--cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCCcc-------------------EE-
Q 039505          146 GKQKNNALELSLRVTNNFE--RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGHVP-------------------IV-  202 (342)
Q Consensus       146 ~~~~~~~~~~l~~at~~f~--~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~~~-------------------Lv-  202 (342)
                      +..+.+++.++..++++|.  +.||+|+||+||+|.+.++ .||||++..........                   ++ 
T Consensus        15 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~   94 (326)
T 3uim_A           15 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRG   94 (326)
T ss_dssp             CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred             CccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEE
Confidence            3445678899999999998  8999999999999998777 99999997654332211                   33 


Q ss_pred             EeeCC---cEEE--E------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--Cc
Q 039505          203 ECHVG---ALIT--I------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SR  245 (342)
Q Consensus       203 ~c~~~---~lv~--m------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~  245 (342)
                      +|...   ++|+  +                              +++||+|||+.+.++|+||||||+|||++++  .+
T Consensus        95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~k  174 (326)
T 3uim_A           95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV  174 (326)
T ss_dssp             EECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEE
T ss_pred             EEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEE
Confidence            44333   3333  1                              7899999999444499999999999999998  34


Q ss_pred             cccCCCCC-------ccccccccCcceee--------------------------cCCCCccccccc----c-ccccc--
Q 039505          246 ISPVEGGT-------HMSTTIAGTAGFLN--------------------------TKNPVISKSIEN----G-NSHLR--  285 (342)
Q Consensus       246 ~~~~~~~~-------~~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~----~-~~~l~--  285 (342)
                      +.+++...       .......||++|+|                          ||+.|++.....    . ...++  
T Consensus       175 l~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  254 (326)
T 3uim_A          175 VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG  254 (326)
T ss_dssp             ECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTT
T ss_pred             eccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHH
Confidence            44433321       11223569999998                          999999632110    0 00000  


Q ss_pred             --c----cccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhc
Q 039505          286 --D----KSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQG  334 (342)
Q Consensus       286 --~----~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i  334 (342)
                        .    ....+..+...........+.+++.+||+.+|++|||+.||++.|++.
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~  309 (326)
T 3uim_A          255 LLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD  309 (326)
T ss_dssp             TTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred             HhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence              0    344555566667788889999999999999999999999999999864

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.89  E-value=1.1e-23  Score=195.92  Aligned_cols=182  Identities=31%  Similarity=0.425  Sum_probs=131.5

Q ss_pred             HHHHHHHhhccC--cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCCcc------------------EE-EeeCC---
Q 039505          153 LELSLRVTNNFE--RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGHVP------------------IV-ECHVG---  207 (342)
Q Consensus       153 ~~~l~~at~~f~--~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~~~------------------Lv-~c~~~---  207 (342)
                      +.++..++++|.  +.||+|+||+||+|++.++ .||||++..........                  ++ +|...   
T Consensus        31 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  110 (321)
T 2qkw_B           31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEM  110 (321)
T ss_dssp             CSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCC
T ss_pred             HHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeE
Confidence            334555778888  8999999999999998777 99999987654322111                  33 44333   


Q ss_pred             cEEE--E------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCC
Q 039505          208 ALIT--I------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGT  253 (342)
Q Consensus       208 ~lv~--m------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~  253 (342)
                      ++|+  +                              +++||+|||+   .+|+||||||+|||++.+  .++.+++...
T Consensus       111 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~  187 (321)
T 2qkw_B          111 ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISK  187 (321)
T ss_dssp             EEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCSTTEEECTTCCEEECCCTTCE
T ss_pred             EEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcC---CCeecCCCCHHHEEECCCCCEEEeeccccc
Confidence            3333  1                              7899999999   999999999999999988  3444443321


Q ss_pred             c--------cccccccCcceee--------------------------cCCCCcccccccccccccc-----------cc
Q 039505          254 H--------MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRD-----------KS  288 (342)
Q Consensus       254 ~--------~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~-----------~~  288 (342)
                      .        ......||+.|+|                          ||+.|+.............           ..
T Consensus       188 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (321)
T 2qkw_B          188 KGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQ  267 (321)
T ss_dssp             ECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCS
T ss_pred             ccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHH
Confidence            1        1223568899998                          9999987654322111111           34


Q ss_pred             cccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccCC
Q 039505          289 TVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNGS  337 (342)
Q Consensus       289 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~~  337 (342)
                      .+++.+......+....+.+++.+||+.+|++|||+.||++.|+.+.+.
T Consensus       268 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~  316 (321)
T 2qkw_B          268 IVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL  316 (321)
T ss_dssp             SSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             hcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence            4566666667788889999999999999999999999999999987543

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.89  E-value=1.2e-22  Score=187.06  Aligned_cols=185  Identities=27%  Similarity=0.395  Sum_probs=131.9

Q ss_pred             CCCCHHHHHHHhhccC--------cccCcCCCeeEEEEEECCCeEEEEEccCCCCCCCcc--------------------
Q 039505          149 KNNALELSLRVTNNFE--------RVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGHVP--------------------  200 (342)
Q Consensus       149 ~~~~~~~l~~at~~f~--------~~lG~G~fG~Vykg~~~~~~vAVK~l~~~~~~~~~~--------------------  200 (342)
                      ..++++++.++|++|.        +.||+|+||.||+|.+.+..||||++.........+                    
T Consensus        13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i   92 (307)
T 2nru_A           13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENL   92 (307)
T ss_dssp             EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTB
T ss_pred             CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCe
Confidence            4678999999999998        469999999999999855599999987643221111                    


Q ss_pred             --EE-EeeCC---cEEE--E-----------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC
Q 039505          201 --IV-ECHVG---ALIT--I-----------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK  243 (342)
Q Consensus       201 --Lv-~c~~~---~lv~--m-----------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~  243 (342)
                        ++ ++...   ++++  +                             +++||+|||+   .+|+||||||+|||++++
T Consensus        93 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nili~~~  169 (307)
T 2nru_A           93 VELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEA  169 (307)
T ss_dssp             CCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTT
T ss_pred             EEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecCCCCHHHEEEcCC
Confidence              34 44433   4444  1                             8899999999   999999999999999988


Q ss_pred             C--ccccCCCCCc--------cccccccCcceee-------------------------cCCCCcccccccc-cccccc-
Q 039505          244 S--RISPVEGGTH--------MSTTIAGTAGFLN-------------------------TKNPVISKSIENG-NSHLRD-  286 (342)
Q Consensus       244 a--~~~~~~~~~~--------~~~~~~Gt~~y~a-------------------------tG~~P~~~~~~~~-~~~l~~-  286 (342)
                      .  ++.+++....        ......||+.|+|                         ||+.|+....... ...+.. 
T Consensus       170 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~  249 (307)
T 2nru_A          170 FTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEE  249 (307)
T ss_dssp             CCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHH
T ss_pred             CcEEEeecccccccccccccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHH
Confidence            3  4444332211        1223578999998                         9999998654332 101111 


Q ss_pred             --------cccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccCC
Q 039505          287 --------KSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNGS  337 (342)
Q Consensus       287 --------~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~~  337 (342)
                              .+.+++.+ ...+......+.+++..||+.+|++|||+.+|++.|+++..+
T Consensus       250 ~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~s  307 (307)
T 2nru_A          250 IEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS  307 (307)
T ss_dssp             HHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC--
T ss_pred             hhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhcC
Confidence                    12233333 334566778899999999999999999999999999998753

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.89  E-value=5.7e-24  Score=196.92  Aligned_cols=160  Identities=20%  Similarity=0.237  Sum_probs=106.1

Q ss_pred             hccC--cccCcCCCeeEEEEEECC----C-eEEEEEccCCCCC------CCcc-----------EE----EeeCC---cE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVK----S-EVAMKMLSPSSSQ------GHVP-----------IV----ECHVG---AL  209 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~----~-~vAVK~l~~~~~~------~~~~-----------Lv----~c~~~---~l  209 (342)
                      ++|.  +.||+|+||+||+|+...    + .||||+++.....      ...|           ++    ++...   ++
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            3566  899999999999998732    2 8999998653211      1111           22    22222   33


Q ss_pred             EE--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCC------
Q 039505          210 IT--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGT------  253 (342)
Q Consensus       210 v~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~------  253 (342)
                      |+  +                          ++.||+|||+   .+||||||||+|||++++  .|+.+++.+.      
T Consensus       104 vmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~  180 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE  180 (304)
T ss_dssp             EECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----
T ss_pred             EEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHeEEcCCCCEEecccccceeccCCC
Confidence            33  1                          8999999999   999999999999999988  4455544321      


Q ss_pred             ccccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHH
Q 039505          254 HMSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAV  307 (342)
Q Consensus       254 ~~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~  307 (342)
                      ......+||+.|||                          ||+.||.......   +. ..+....+  ..+.....++.
T Consensus       181 ~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~---~~-~~i~~~~~--~~p~~~s~~~~  254 (304)
T 3ubd_A          181 KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE---TM-TMILKAKL--GMPQFLSPEAQ  254 (304)
T ss_dssp             CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HH-HHHHHCCC--CCCTTSCHHHH
T ss_pred             ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHH---HH-HHHHcCCC--CCCCcCCHHHH
Confidence            12234789999999                          9999998654322   11 11111111  11223345588


Q ss_pred             HHHHHcccccCCCCCC-----HHHHHH
Q 039505          308 EIAMASVSSKVNRRPL-----MNQVVM  329 (342)
Q Consensus       308 ~l~~~Cl~~~P~~RPs-----m~eV~~  329 (342)
                      +++.+||+.||++|||     ++|+++
T Consensus       255 ~li~~~L~~dP~~R~ta~~~~~~eil~  281 (304)
T 3ubd_A          255 SLLRMLFKRNPANRLGAGPDGVEEIKR  281 (304)
T ss_dssp             HHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred             HHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence            9999999999999998     466653

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.87  E-value=3.4e-23  Score=198.84  Aligned_cols=166  Identities=15%  Similarity=0.157  Sum_probs=108.7

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc------c-----------EE----EeeC-------C-
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV------P-----------IV----ECHV-------G-  207 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~------~-----------Lv----~c~~-------~-  207 (342)
                      +.|.  +.||+|+||+||+|+...+  .||||+++........      |           ++    ++..       + 
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            3465  8999999999999998754  9999999765322111      1           22    2211       1 


Q ss_pred             -cEEE--E-------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc---
Q 039505          208 -ALIT--I-------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH---  254 (342)
Q Consensus       208 -~lv~--m-------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~---  254 (342)
                       ++|+  +                         ++.||+|||+   .+||||||||+|||++.+  .++.+++....   
T Consensus       134 ~~ivmE~~~g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~  210 (398)
T 4b99_A          134 VYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCT  210 (398)
T ss_dssp             EEEEEECCSEEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCBCC--
T ss_pred             EEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CcCcCCCcCccccccCCCCCEEEeecceeeeccc
Confidence             3444  2                         8999999999   999999999999999988  44554443321   


Q ss_pred             -------cccccccCcceee---------------------------cCCCCcccccccc-cccccc------ccccc--
Q 039505          255 -------MSTTIAGTAGFLN---------------------------TKNPVISKSIENG-NSHLRD------KSTVD--  291 (342)
Q Consensus       255 -------~~~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~-~~~l~~------~~~~d--  291 (342)
                             .....+||+.|||                           ||++||....... ...+..      .....  
T Consensus       211 ~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~  290 (398)
T 4b99_A          211 SPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAV  290 (398)
T ss_dssp             -----CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC--
T ss_pred             CccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhh
Confidence                   1234689999999                           9999997653221 000000      00000  


Q ss_pred             ---------ccCCC--CCC-----hHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          292 ---------LSFKG--EFD-----IISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       292 ---------~~l~~--~~~-----~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                               ..+..  ..+     .....++.+++.+||+.||++|||+.|+++
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  344 (398)
T 4b99_A          291 GAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR  344 (398)
T ss_dssp             ---CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             hhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence                     00000  001     112345789999999999999999999985

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.87  E-value=6.6e-23  Score=194.51  Aligned_cols=90  Identities=23%  Similarity=0.343  Sum_probs=62.4

Q ss_pred             HhhccC--cccCcCCCeeEEEEEEC----CC-eEEEEEccCCCCCCC--cc------------EE----EeeCC---cEE
Q 039505          159 VTNNFE--RVPYKGGFITVYHGQLV----KS-EVAMKMLSPSSSQGH--VP------------IV----ECHVG---ALI  210 (342)
Q Consensus       159 at~~f~--~~lG~G~fG~Vykg~~~----~~-~vAVK~l~~~~~~~~--~~------------Lv----~c~~~---~lv  210 (342)
                      ..+.|.  +.||+|+||+||+|+.+    .+ .||||++........  .+            ++    ++...   ++|
T Consensus        19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lv   98 (361)
T 4f9c_A           19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIA   98 (361)
T ss_dssp             GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEE
T ss_pred             ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEE
Confidence            445676  89999999999999864    23 899999865432110  01            11    11111   333


Q ss_pred             E--E-----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC---CccccCCC
Q 039505          211 T--I-----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK---SRISPVEG  251 (342)
Q Consensus       211 ~--m-----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~---a~~~~~~~  251 (342)
                      +  +                       +++||+|||+   .+||||||||+|||++.+   .++.+++.
T Consensus        99 mE~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH~---~gIiHRDiKPeNiLl~~~~~~~kl~DFGl  164 (361)
T 4f9c_A           99 MPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQ---FGIVHRDVKPSNFLYNRRLKKYALVDFGL  164 (361)
T ss_dssp             EECCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred             EeCCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCcCCHHHeEEeCCCCeEEECcCCC
Confidence            3  1                       8999999999   999999999999999876   34455443

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.87  E-value=4.9e-23  Score=190.56  Aligned_cols=160  Identities=18%  Similarity=0.214  Sum_probs=97.1

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-----c--------------EE-EeeC-C--------
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-----P--------------IV-ECHV-G--------  207 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-----~--------------Lv-~c~~-~--------  207 (342)
                      ++|.  +.||+|+||+||+|+...+  .||||+++....+...     |              ++ ++.. +        
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            4566  8999999999999998754  9999999765432211     1              22 2211 0        


Q ss_pred             ---cEEE--E--------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--Ccccc
Q 039505          208 ---ALIT--I--------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISP  248 (342)
Q Consensus       208 ---~lv~--m--------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~  248 (342)
                         ..+|  |                                +++||+|||+   .+||||||||+||||+.+  .|+.+
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~---~~IiHRDlKp~NILl~~~~~vKl~D  161 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGD  161 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHH---CcCccccCcHHHeEECCCCcEEEcc
Confidence               1122  2                                8899999999   999999999999999988  45555


Q ss_pred             CCCCCcc------------------ccccccCcceee----cCCCCcccccccccccccc-----cccccc---------
Q 039505          249 VEGGTHM------------------STTIAGTAGFLN----TKNPVISKSIENGNSHLRD-----KSTVDL---------  292 (342)
Q Consensus       249 ~~~~~~~------------------~~~~~Gt~~y~a----tG~~P~~~~~~~~~~~l~~-----~~~~d~---------  292 (342)
                      ++.....                  .+..+||+.|||    .|+ +++...     ++|.     .+++-|         
T Consensus       162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~-~y~~~~-----DiwSlGvilyell~Pf~~~~~~~~  235 (299)
T 4g31_A          162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGN-SYSHKV-----DIFSLGLILFELLYPFSTQMERVR  235 (299)
T ss_dssp             CCCC--------------------------CCCTTSCHHHHTTC-CCCTHH-----HHHHHHHHHHHHHSCCSSHHHHHH
T ss_pred             CccceecCCCccccccccccccccccCCcccCccccCHHHHcCC-CCCCHH-----HHHHHHHHHHHHccCCCCccHHHH
Confidence            5433211                  123579999999    333 222111     1111     011100         


Q ss_pred             ----cCCCCCC---hHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          293 ----SFKGEFD---IISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       293 ----~l~~~~~---~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                          ......+   ......+.+++.+||+.||++|||+.|+++
T Consensus       236 ~~~~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  279 (299)
T 4g31_A          236 TLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE  279 (299)
T ss_dssp             HHHHHHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHhcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence                0001111   122334678999999999999999999986

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.86  E-value=2.1e-22  Score=203.15  Aligned_cols=162  Identities=25%  Similarity=0.347  Sum_probs=108.0

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCC---CCCc----c-----------------EE-EeeCC---c
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSS---QGHV----P-----------------IV-ECHVG---A  208 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~---~~~~----~-----------------Lv-~c~~~---~  208 (342)
                      ++|.  ++||+|+||+||+|+...+  .||||++++...   ....    +                 +. .+...   +
T Consensus       189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly  268 (689)
T 3v5w_A          189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS  268 (689)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence            5677  8999999999999999765  999999864310   1000    0                 22 22222   3


Q ss_pred             EEE--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc----
Q 039505          209 LIT--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH----  254 (342)
Q Consensus       209 lv~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~----  254 (342)
                      +|+  +                          |+.||+|||+   .+||||||||+||||+.+  .|+.+++....    
T Consensus       269 lVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~---~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~  345 (689)
T 3v5w_A          269 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK  345 (689)
T ss_dssp             EEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred             EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHeEEeCCCCEEecccceeeecCCC
Confidence            333  1                          8999999999   999999999999999998  44555444321    


Q ss_pred             cccccccCcceee---------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHH
Q 039505          255 MSTTIAGTAGFLN---------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAV  307 (342)
Q Consensus       255 ~~~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~  307 (342)
                      ...+.+||+.|||                           ||++||..........+.. .+....+  ..+......+.
T Consensus       346 ~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~-~i~~~~~--~~p~~~S~~a~  422 (689)
T 3v5w_A          346 KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR-MTLTMAV--ELPDSFSPELR  422 (689)
T ss_dssp             CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHH-HHHHCCC--CCCTTSCHHHH
T ss_pred             CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH-hhcCCCC--CCCccCCHHHH
Confidence            2345789999999                           9999997643221101111 1111111  12223345588


Q ss_pred             HHHHHcccccCCCCCC-----HHHHH
Q 039505          308 EIAMASVSSKVNRRPL-----MNQVV  328 (342)
Q Consensus       308 ~l~~~Cl~~~P~~RPs-----m~eV~  328 (342)
                      +++.+||+.||.+|++     +.||.
T Consensus       423 dLI~~lL~~dP~~Rl~~~~~ga~ei~  448 (689)
T 3v5w_A          423 SLLEGLLQRDVNRRLGCLGRGAQEVK  448 (689)
T ss_dssp             HHHHHHTCSCGGGCTTCSSSTHHHHT
T ss_pred             HHHHHHccCCHhHCCCCCCCCHHHHh
Confidence            9999999999999998     67765

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.86  E-value=6.3e-22  Score=184.29  Aligned_cols=170  Identities=20%  Similarity=0.218  Sum_probs=114.4

Q ss_pred             cccCcCCCeeEEEEEECCCeEEEEEccCCCCCCCc---c--------------EE-EeeCC-------cEEE--E-----
Q 039505          165 RVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGHV---P--------------IV-ECHVG-------ALIT--I-----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~~vAVK~l~~~~~~~~~---~--------------Lv-~c~~~-------~lv~--m-----  212 (342)
                      ++||+|+||+||+|++.+..||||++.........   +              ++ +|...       ++|+  +     
T Consensus        30 ~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L  109 (322)
T 3soc_A           30 EVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSL  109 (322)
T ss_dssp             EEEECSTTCEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBH
T ss_pred             heecccCceEEEEEEECCCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCCCCH
Confidence            89999999999999987559999998643211100   0              44 43331       3333  1     


Q ss_pred             --------------------ehhhhhhhhccCCC----------CeeeCCCCcceEEecCC--CccccCCCCCc------
Q 039505          213 --------------------PKEGLEYLHQGLKH----------PIIQRDMKSTNILLNEK--SRISPVEGGTH------  254 (342)
Q Consensus       213 --------------------ia~gL~yLH~~~~~----------~IiHrDlKp~NILLd~~--a~~~~~~~~~~------  254 (342)
                                          +++||+|||+   .          +|+||||||+|||++.+  .++.+++....      
T Consensus       110 ~~~l~~~~~~~~~~~~i~~qi~~al~~LH~---~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~  186 (322)
T 3soc_A          110 SDFLKANVVSWNELCHIAETMARGLAYLHE---DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKS  186 (322)
T ss_dssp             HHHHHHCCBCHHHHHHHHHHHHHHHHHHTC---CEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECTTSC
T ss_pred             HHHHHhcCCCHHHHHHHHHHHHHHHHHHHh---hccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccccccC
Confidence                                8899999999   6          99999999999999988  44444433211      


Q ss_pred             --cccccccCcceee-------------------------------cCCCCcccccccccccccc---------------
Q 039505          255 --MSTTIAGTAGFLN-------------------------------TKNPVISKSIENGNSHLRD---------------  286 (342)
Q Consensus       255 --~~~~~~Gt~~y~a-------------------------------tG~~P~~~~~~~~~~~l~~---------------  286 (342)
                        ......||+.|+|                               ||+.||..........+..               
T Consensus       187 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (322)
T 3soc_A          187 AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVV  266 (322)
T ss_dssp             CCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHH
T ss_pred             ccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhh
Confidence              1223578999998                               8999987643322101100               


Q ss_pred             -cccccccCCCC-CChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccCC
Q 039505          287 -KSTVDLSFKGE-FDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNGS  337 (342)
Q Consensus       287 -~~~~d~~l~~~-~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~~  337 (342)
                       .....+.+... ........+.+++.+||+.+|++|||+.||++.|+++++.
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~  319 (322)
T 3soc_A          267 VHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL  319 (322)
T ss_dssp             TTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             hcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence             11111111111 1234566799999999999999999999999999998753

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.86  E-value=4.8e-22  Score=185.50  Aligned_cols=168  Identities=18%  Similarity=0.249  Sum_probs=110.4

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC------eEEEEEccCCCCCCCcc-------------------EE-EeeCC--cEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS------EVAMKMLSPSSSQGHVP-------------------IV-ECHVG--ALI  210 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~------~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~--~lv  210 (342)
                      ++|.  +.||+|+||+||+|++..+      .||+|.+..........                   ++ +|..+  .++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~v   94 (327)
T 3poz_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI   94 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSSEEEE
T ss_pred             HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEE
Confidence            3455  8999999999999997543      46899886543222211                   55 66655  444


Q ss_pred             E--E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCccccCCCCCc-------
Q 039505          211 T--I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH-------  254 (342)
Q Consensus       211 ~--m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~~~~~~~~~~-------  254 (342)
                      +  +                           +++||+|||+   .+|+||||||+|||++.+.++...+++..       
T Consensus        95 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~  171 (327)
T 3poz_A           95 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE  171 (327)
T ss_dssp             EECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTC
T ss_pred             EEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCChheEEECCCCCEEEccCcceeEccCCc
Confidence            4  2                           8999999999   89999999999999998833333333211       


Q ss_pred             ---cccccccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHH
Q 039505          255 ---MSTTIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVG  304 (342)
Q Consensus       255 ---~~~~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~  304 (342)
                         ......||+.|+|                          | |+.|+........     ...+........+..+..
T Consensus       172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~  246 (327)
T 3poz_A          172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI-----SSILEKGERLPQPPICTI  246 (327)
T ss_dssp             C-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH-----HHHHHTTCCCCCCTTBCH
T ss_pred             ccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHH-----HHHHHcCCCCCCCccCCH
Confidence               1123456788988                          7 9999986543321     111111111222334455


Q ss_pred             HHHHHHHHcccccCCCCCCHHHHHHHHHhccC
Q 039505          305 KAVEIAMASVSSKVNRRPLMNQVVMVREQGNG  336 (342)
Q Consensus       305 ~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~  336 (342)
                      .+.+++.+||+.+|++||++.|+++.|+.+..
T Consensus       247 ~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~  278 (327)
T 3poz_A          247 DVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             HHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            68899999999999999999999999988754

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.85  E-value=1.2e-21  Score=181.00  Aligned_cols=165  Identities=18%  Similarity=0.155  Sum_probs=110.1

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc------------------EE-EeeCC---cEEE--E------
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP------------------IV-ECHVG---ALIT--I------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~------------------Lv-~c~~~---~lv~--m------  212 (342)
                      +.||+|+||+||+|.+..+  .||+|++..........                  ++ +|..+   ++|+  +      
T Consensus        16 ~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~   95 (310)
T 3s95_A           16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLR   95 (310)
T ss_dssp             EEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHH
T ss_pred             ceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCcHH
Confidence            8999999999999998754  99999885532211110                  44 44443   4444  2      


Q ss_pred             ---------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCcc--------------
Q 039505          213 ---------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHM--------------  255 (342)
Q Consensus       213 ---------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~~--------------  255 (342)
                                           +++||+|||+   .+|+||||||+|||++++.  ++.+++.....              
T Consensus        96 ~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  172 (310)
T 3s95_A           96 GIIKSMDSQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLK  172 (310)
T ss_dssp             HHHHHCCTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEECTTSCEEECCCTTCEECC-------------
T ss_pred             HHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCcCeEEECCCCCEEEeecccceeccccccccccccccc
Confidence                                 8999999999   9999999999999999883  44443322110              


Q ss_pred             ------ccccccCcceee--------------------------cCCCCcccccccccccccc-cccccccCCCCCChHH
Q 039505          256 ------STTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRD-KSTVDLSFKGEFDIIS  302 (342)
Q Consensus       256 ------~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~l~~~~~~~~  302 (342)
                            .....||+.|+|                          ||..|+............. ....+....    ...
T Consensus       173 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~  248 (310)
T 3s95_A          173 KPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCP----PNC  248 (310)
T ss_dssp             -------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHTCC----TTC
T ss_pred             ccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccccCC----CCC
Confidence                  013579999998                          6776665433221000000 111111111    222


Q ss_pred             HHHHHHHHHHcccccCCCCCCHHHHHHHHHhccC
Q 039505          303 VGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNG  336 (342)
Q Consensus       303 ~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~  336 (342)
                      ...+.+++.+||+.+|++|||+.++++.|+.++.
T Consensus       249 ~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~  282 (310)
T 3s95_A          249 PPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRM  282 (310)
T ss_dssp             CTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            3448889999999999999999999999998864

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.85  E-value=1.6e-21  Score=180.82  Aligned_cols=171  Identities=19%  Similarity=0.207  Sum_probs=111.5

Q ss_pred             hccC--cccCcCCCeeEEEEEECCCeEEEEEccCCCCCCCc------c--------------EE-EeeCC---cEEE--E
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGHV------P--------------IV-ECHVG---ALIT--I  212 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~~vAVK~l~~~~~~~~~------~--------------Lv-~c~~~---~lv~--m  212 (342)
                      ++|.  +.||+|+||+||+|++.+..||||++.........      +              ++ ++...   ++|+  +
T Consensus        37 ~~y~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~  116 (309)
T 3p86_A           37 CDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYL  116 (309)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECC
T ss_pred             hHceeeeEeecCCCeEEEEEEECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecC
Confidence            3454  89999999999999986559999999765432211      1              34 44433   4444  2


Q ss_pred             -----------------------------ehhhhhhhhccCCCC--eeeCCCCcceEEecCCC--ccccCCCCCc-----
Q 039505          213 -----------------------------PKEGLEYLHQGLKHP--IIQRDMKSTNILLNEKS--RISPVEGGTH-----  254 (342)
Q Consensus       213 -----------------------------ia~gL~yLH~~~~~~--IiHrDlKp~NILLd~~a--~~~~~~~~~~-----  254 (342)
                                                   +++||+|||+   .+  |+||||||+|||++.+.  ++.+++....     
T Consensus       117 ~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~  193 (309)
T 3p86_A          117 SRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN---RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF  193 (309)
T ss_dssp             TTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHT---SSSCCCCTTCCGGGEEECTTCCEEECCCC---------
T ss_pred             CCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCCEECCCCChhhEEEeCCCcEEECCCCCCccccccc
Confidence                                         8899999999   77  99999999999999884  4444433211     


Q ss_pred             -cccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHH
Q 039505          255 -MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAV  307 (342)
Q Consensus       255 -~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~  307 (342)
                       ......||+.|+|                          ||+.||...........+.......    ..+......+.
T Consensus       194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~  269 (309)
T 3p86_A          194 LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRL----EIPRNLNPQVA  269 (309)
T ss_dssp             --------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCC----CCCTTSCHHHH
T ss_pred             cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCC----CCCccCCHHHH
Confidence             1233678999998                          8888887654322000000011111    22233445688


Q ss_pred             HHHHHcccccCCCCCCHHHHHHHHHhccCCC
Q 039505          308 EIAMASVSSKVNRRPLMNQVVMVREQGNGSR  338 (342)
Q Consensus       308 ~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~~~  338 (342)
                      +++.+||+.+|++|||+.++++.|+.+.++.
T Consensus       270 ~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~  300 (309)
T 3p86_A          270 AIIEGCWTNEPWKRPSFATIMDLLRPLIKSA  300 (309)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence            9999999999999999999999999886653

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.85  E-value=1.4e-21  Score=176.09  Aligned_cols=165  Identities=13%  Similarity=0.181  Sum_probs=114.9

Q ss_pred             cccCcCCCeeEEEEEECCCeEEEEEccCCCCCCCc------c--------------EE-EeeCC-----cEEE--E----
Q 039505          165 RVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGHV------P--------------IV-ECHVG-----ALIT--I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~~vAVK~l~~~~~~~~~------~--------------Lv-~c~~~-----~lv~--m----  212 (342)
                      +.||+|+||+||+|++.+..||||+++........      +              ++ +|...     ++++  +    
T Consensus        16 ~~lg~G~~g~V~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~   95 (271)
T 3kmu_A           16 TKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGS   95 (271)
T ss_dssp             EEEEEETTEEEEEEEETTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTTCB
T ss_pred             HHhcCCCcceEEEEEECCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCCCc
Confidence            89999999999999997559999999765322111      0              33 44332     3444  2    


Q ss_pred             ------------------------ehhhhhhhhccCCCC--eeeCCCCcceEEecCC--CccccCCCCCc-cccccccCc
Q 039505          213 ------------------------PKEGLEYLHQGLKHP--IIQRDMKSTNILLNEK--SRISPVEGGTH-MSTTIAGTA  263 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~--IiHrDlKp~NILLd~~--a~~~~~~~~~~-~~~~~~Gt~  263 (342)
                                              +++||+|||+   .+  |+||||||+|||++.+  .++.+++++.. ......||+
T Consensus        96 L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~t~  172 (271)
T 3kmu_A           96 LYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT---LEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAP  172 (271)
T ss_dssp             HHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTT---SSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSCTTCBSCG
T ss_pred             HHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhc---CCCceecCCCccceEEEcCCcceeEEeccceeeecccCccCCc
Confidence                                    8999999999   77  9999999999999988  45555444433 223467888


Q ss_pred             ceee-----------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcc
Q 039505          264 GFLN-----------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASV  314 (342)
Q Consensus       264 ~y~a-----------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl  314 (342)
                      .|+|                             ||+.|+.......  ..  ............+......+.+++..||
T Consensus       173 ~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~li~~~l  248 (271)
T 3kmu_A          173 AWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNME--IG--MKVALEGLRPTIPPGISPHVSKLMKICM  248 (271)
T ss_dssp             GGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHH--HH--HHHHHSCCCCCCCTTCCHHHHHHHHHHT
T ss_pred             cccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHH--HH--HHHHhcCCCCCCCCCCCHHHHHHHHHHc
Confidence            8988                             8888887543221  00  0111111111223334456889999999


Q ss_pred             cccCCCCCCHHHHHHHHHhccC
Q 039505          315 SSKVNRRPLMNQVVMVREQGNG  336 (342)
Q Consensus       315 ~~~P~~RPsm~eV~~~L~~i~~  336 (342)
                      +.+|++|||+.|+++.|+++.+
T Consensus       249 ~~~p~~Rps~~~il~~L~~l~~  270 (271)
T 3kmu_A          249 NEDPAKRPKFDMIVPILEKMQD  270 (271)
T ss_dssp             CSSGGGSCCHHHHHHHHHHHCC
T ss_pred             CCChhhCcCHHHHHHHHHHhhc
Confidence            9999999999999999999875

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.85  E-value=5e-22  Score=199.27  Aligned_cols=164  Identities=15%  Similarity=0.172  Sum_probs=109.7

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc----c--------------EE-EeeCC---cEEE--E
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV----P--------------IV-ECHVG---ALIT--I  212 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~----~--------------Lv-~c~~~---~lv~--m  212 (342)
                      ++|.  +.||+|+||+||+|+...+  .||||++.........    |              +. ++...   ++|+  +
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~  236 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  236 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence            4566  8999999999999998765  9999998764321111    1              22 22222   2222  1


Q ss_pred             ---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC----CccccCCCCCc-----cc
Q 039505          213 ---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK----SRISPVEGGTH-----MS  256 (342)
Q Consensus       213 ---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~----a~~~~~~~~~~-----~~  256 (342)
                                                 |++||+|||+   .+|+||||||+|||++.+    .|+.+++....     ..
T Consensus       237 ~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~---~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~  313 (573)
T 3uto_A          237 SGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV  313 (573)
T ss_dssp             CCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEE
T ss_pred             CCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCce
Confidence                                       8999999999   999999999999999865    45555554322     12


Q ss_pred             cccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHH
Q 039505          257 TTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIA  310 (342)
Q Consensus       257 ~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~  310 (342)
                      ...+||+.|||                          +|+.||.......  .+....-.+..+...........+.+++
T Consensus       314 ~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~--~~~~i~~~~~~~~~~~~~~~s~~~~dli  391 (573)
T 3uto_A          314 KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE--TLRNVKSCDWNMDDSAFSGISEDGKDFI  391 (573)
T ss_dssp             EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH--HHHHHHTTCCCCCSGGGTTSCHHHHHHH
T ss_pred             eeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH--HHHHHHhCCCCCCcccccCCCHHHHHHH
Confidence            34689999999                          8999997654322  1100001111111111122345578999


Q ss_pred             HHcccccCCCCCCHHHHHH
Q 039505          311 MASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       311 ~~Cl~~~P~~RPsm~eV~~  329 (342)
                      .+||+.||++|||+.|+++
T Consensus       392 ~~~L~~dp~~R~t~~e~l~  410 (573)
T 3uto_A          392 RKLLLADPNTRMTIHQALE  410 (573)
T ss_dssp             HTTSCSSGGGSCCHHHHHH
T ss_pred             HHHccCChhHCcCHHHHhc
Confidence            9999999999999999986

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.85  E-value=1.8e-21  Score=178.43  Aligned_cols=171  Identities=18%  Similarity=0.234  Sum_probs=110.9

Q ss_pred             hccC--cccCcCCCeeEEEEEECCCeEEEEEccCCCCCCCc-c----------------EE-EeeCC-------cEEE--
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGHV-P----------------IV-ECHVG-------ALIT--  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~~vAVK~l~~~~~~~~~-~----------------Lv-~c~~~-------~lv~--  211 (342)
                      ++|.  +.||+|+||+||+|++.+..||||++......... +                ++ +|...       ++|+  
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~   87 (301)
T 3q4u_A            8 RDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHY   87 (301)
T ss_dssp             GGCEEEEEEEECSSEEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECC
T ss_pred             CcEEEEEeeccCCCcEEEEEEECCEEEEEEEeccccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhh
Confidence            4565  89999999999999985449999998654211100 0                33 32211       3333  


Q ss_pred             E-------------------------ehhhhhhhh--------ccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc-
Q 039505          212 I-------------------------PKEGLEYLH--------QGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM-  255 (342)
Q Consensus       212 m-------------------------ia~gL~yLH--------~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~-  255 (342)
                      +                         +++||+|||        +   .+|+||||||+|||++.+  .++.+++..... 
T Consensus        88 ~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~  164 (301)
T 3q4u_A           88 HEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGK---PAIAHRDLKSKNILVKKNGQCCIADLGLAVMHS  164 (301)
T ss_dssp             CTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCB---CEEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred             ccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCC---CCeecCCCChHhEEEcCCCCEEEeeCCCeeecc
Confidence            1                         899999999        6   899999999999999988  444444432110 


Q ss_pred             ---------ccccccCcceee--------------------------------cC----------CCCcccccccc--cc
Q 039505          256 ---------STTIAGTAGFLN--------------------------------TK----------NPVISKSIENG--NS  282 (342)
Q Consensus       256 ---------~~~~~Gt~~y~a--------------------------------tG----------~~P~~~~~~~~--~~  282 (342)
                               .....||+.|+|                                ||          +.|+.......  ..
T Consensus       165 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~  244 (301)
T 3q4u_A          165 QSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFE  244 (301)
T ss_dssp             TTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHH
T ss_pred             cccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchh
Confidence                     112378999988                                66          56654432211  00


Q ss_pred             cccc---cccccccCCCC-CChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhc
Q 039505          283 HLRD---KSTVDLSFKGE-FDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQG  334 (342)
Q Consensus       283 ~l~~---~~~~d~~l~~~-~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i  334 (342)
                      .+..   .....+.+... ........+.+++.+||+.+|++|||+.||++.|+++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          245 DMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             HHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             hhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence            0000   11111222111 1234667899999999999999999999999999986

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.85  E-value=3.7e-21  Score=175.47  Aligned_cols=165  Identities=19%  Similarity=0.255  Sum_probs=111.8

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-----------c--------------EE-EeeCC-cEEE--E-
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-----------P--------------IV-ECHVG-ALIT--I-  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-----------~--------------Lv-~c~~~-~lv~--m-  212 (342)
                      +.||+|+||+||+|++..+  .||||++.........           +              ++ ++... .+++  + 
T Consensus        25 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~lv~e~~~  104 (287)
T 4f0f_A           25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRMVMEFVP  104 (287)
T ss_dssp             EECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTTEEEEECCT
T ss_pred             hccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCCeEEEEecC
Confidence            8999999999999998644  9999998765433211           0              33 33333 4443  1 


Q ss_pred             --------------------------ehhhhhhhhccCCCC--eeeCCCCcceEEecCCC-------ccccCCCCCc---
Q 039505          213 --------------------------PKEGLEYLHQGLKHP--IIQRDMKSTNILLNEKS-------RISPVEGGTH---  254 (342)
Q Consensus       213 --------------------------ia~gL~yLH~~~~~~--IiHrDlKp~NILLd~~a-------~~~~~~~~~~---  254 (342)
                                                +++||+|||+   .+  |+||||||+|||++.+.       ++.+++....   
T Consensus       105 ~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~  181 (287)
T 4f0f_A          105 CGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQN---QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVH  181 (287)
T ss_dssp             TCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSS
T ss_pred             CCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHh---CCCCeecCCCCcceEEEeccCCCCceeEEeCCCCccccccc
Confidence                                      8899999999   77  99999999999998652       3444443321   


Q ss_pred             cccccccCcceee----------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHH
Q 039505          255 MSTTIAGTAGFLN----------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKA  306 (342)
Q Consensus       255 ~~~~~~Gt~~y~a----------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l  306 (342)
                      ......||+.|+|                            ||+.||........ ... ..+.........+......+
T Consensus       182 ~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~l  259 (287)
T 4f0f_A          182 SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI-KFI-NMIREEGLRPTIPEDCPPRL  259 (287)
T ss_dssp             CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHH-HHH-HHHHHSCCCCCCCTTSCHHH
T ss_pred             cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHH-HHH-HHHhccCCCCCCCcccCHHH
Confidence            1233568888887                            88888875432220 000 11111112222233445568


Q ss_pred             HHHHHHcccccCCCCCCHHHHHHHHHhc
Q 039505          307 VEIAMASVSSKVNRRPLMNQVVMVREQG  334 (342)
Q Consensus       307 ~~l~~~Cl~~~P~~RPsm~eV~~~L~~i  334 (342)
                      .+++..||+.+|++|||+.|+++.|+++
T Consensus       260 ~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          260 RNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             HHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence            8999999999999999999999999874

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.84  E-value=1.7e-21  Score=181.84  Aligned_cols=167  Identities=16%  Similarity=0.168  Sum_probs=112.6

Q ss_pred             cccCcCCCeeEEEEEECC----C-eEEEEEccCCCCCCCcc-------------------EE-EeeCC---cEEE--E--
Q 039505          165 RVPYKGGFITVYHGQLVK----S-EVAMKMLSPSSSQGHVP-------------------IV-ECHVG---ALIT--I--  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~----~-~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~---~lv~--m--  212 (342)
                      +.||+|+||+||+|.+..    + .||||+++........+                   ++ +|..+   ++|+  +  
T Consensus        55 ~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~  134 (325)
T 3kul_A           55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMEN  134 (325)
T ss_dssp             EEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECCTT
T ss_pred             eEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCCCC
Confidence            789999999999999853    2 69999997643221111                   44 55443   4444  2  


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc---------cc
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH---------MS  256 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~---------~~  256 (342)
                                               +++||+|||+   .+|+||||||+|||++.+.  ++.+++....         ..
T Consensus       135 ~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~  211 (325)
T 3kul_A          135 GSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTT  211 (325)
T ss_dssp             CBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCSSCEECC----CCEEC
T ss_pred             CcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEECCCCCEEECCCCcccccccCccceeec
Confidence                                     8899999999   9999999999999999883  4444433211         11


Q ss_pred             cccccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHH
Q 039505          257 TTIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEI  309 (342)
Q Consensus       257 ~~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l  309 (342)
                      ....+|+.|+|                          | |+.|+.......   +..  .+........+......+.++
T Consensus       212 ~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~l~~l  286 (325)
T 3kul_A          212 TGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD---VIS--SVEEGYRLPAPMGCPHALHQL  286 (325)
T ss_dssp             C---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH---HHH--HHHTTCCCCCCTTCCHHHHHH
T ss_pred             cCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH---HHH--HHHcCCCCCCCCCcCHHHHHH
Confidence            22345677888                          6 999987654322   111  011111112233445568899


Q ss_pred             HHHcccccCCCCCCHHHHHHHHHhccCCCC
Q 039505          310 AMASVSSKVNRRPLMNQVVMVREQGNGSRI  339 (342)
Q Consensus       310 ~~~Cl~~~P~~RPsm~eV~~~L~~i~~~~~  339 (342)
                      +..||+.+|++|||+.+|++.|+.+....-
T Consensus       287 i~~~l~~dp~~Rps~~eil~~L~~l~~~~~  316 (325)
T 3kul_A          287 MLDCWHKDRAQRPRFSQIVSVLDALIRSPE  316 (325)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred             HHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence            999999999999999999999999865543

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.84  E-value=2.6e-21  Score=180.22  Aligned_cols=164  Identities=16%  Similarity=0.198  Sum_probs=108.1

Q ss_pred             cccCcCCCeeEEEEEECCC------eEEEEEccCCCCCCC-cc------------------EE-EeeCC--cEEE--E--
Q 039505          165 RVPYKGGFITVYHGQLVKS------EVAMKMLSPSSSQGH-VP------------------IV-ECHVG--ALIT--I--  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~------~vAVK~l~~~~~~~~-~~------------------Lv-~c~~~--~lv~--m--  212 (342)
                      +.||+|+||+||+|.+..+      .||+|.+........ ..                  ++ +|.++  ++|+  +  
T Consensus        19 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~   98 (325)
T 3kex_A           19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQLVTQYLPL   98 (325)
T ss_dssp             EEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECBSSEEEEEECCTT
T ss_pred             eeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCccEEEEEeCCC
Confidence            8999999999999998543      388888865432211 11                  45 66544  4444  2  


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCC--------cccc
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGT--------HMST  257 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~--------~~~~  257 (342)
                                               +++||+|||+   .+|+||||||+|||++.+.  ++.+++...        ....
T Consensus        99 ~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~  175 (325)
T 3kex_A           99 GSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYS  175 (325)
T ss_dssp             CBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHH---TTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCCC--
T ss_pred             CCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHh---CCCCCCccchheEEECCCCeEEECCCCcccccCccccccccc
Confidence                                     8999999999   8999999999999999884  333333221        1123


Q ss_pred             ccccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHH
Q 039505          258 TIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIA  310 (342)
Q Consensus       258 ~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~  310 (342)
                      ...||.+|+|                          | |+.|+...........+.     .......+......+.+++
T Consensus       176 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~li  250 (325)
T 3kex_A          176 EAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLE-----KGERLAQPQICTIDVYMVM  250 (325)
T ss_dssp             ---CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHH-----TTCBCCCCTTBCTTTTHHH
T ss_pred             CCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHH-----cCCCCCCCCcCcHHHHHHH
Confidence            3567788888                          7 999998654322101111     0000111122333477899


Q ss_pred             HHcccccCCCCCCHHHHHHHHHhccC
Q 039505          311 MASVSSKVNRRPLMNQVVMVREQGNG  336 (342)
Q Consensus       311 ~~Cl~~~P~~RPsm~eV~~~L~~i~~  336 (342)
                      .+||+.+|++|||+.++++.|+.+..
T Consensus       251 ~~~l~~dp~~Rps~~el~~~l~~~~~  276 (325)
T 3kex_A          251 VKCWMIDENIRPTFKELANEFTRMAR  276 (325)
T ss_dssp             HHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred             HHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            99999999999999999999988754

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.84  E-value=3.3e-21  Score=188.06  Aligned_cols=170  Identities=16%  Similarity=0.190  Sum_probs=118.0

Q ss_pred             hhccC--cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCC---cc--------------EE-EeeCC--cEEE--E--
Q 039505          160 TNNFE--RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGH---VP--------------IV-ECHVG--ALIT--I--  212 (342)
Q Consensus       160 t~~f~--~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~---~~--------------Lv-~c~~~--~lv~--m--  212 (342)
                      .++|.  +.||+|+||+||+|.+.++ .||||+++.......   .+              +. +|...  ++|+  +  
T Consensus       187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~lv~e~~~~  266 (454)
T 1qcf_A          187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAK  266 (454)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEECCCTT
T ss_pred             hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEeCCccEEEEeecCC
Confidence            34555  8999999999999999877 999999976432110   00              44 55443  4444  2  


Q ss_pred             --------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc-------cc
Q 039505          213 --------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM-------ST  257 (342)
Q Consensus       213 --------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~-------~~  257 (342)
                                                +++||+|||+   .+|+||||||+|||++.+  .++.+++.....       ..
T Consensus       267 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~  343 (454)
T 1qcf_A          267 GSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTARE  343 (454)
T ss_dssp             CBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTC
T ss_pred             CcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccC
Confidence                                      8999999999   999999999999999988  444444332211       12


Q ss_pred             ccccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHH
Q 039505          258 TIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIA  310 (342)
Q Consensus       258 ~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~  310 (342)
                      ...+++.|+|                          | |+.|+.......   +..  .+........+..+...+.+++
T Consensus       344 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~---~~~--~i~~~~~~~~~~~~~~~l~~li  418 (454)
T 1qcf_A          344 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE---VIR--ALERGYRMPRPENCPEELYNIM  418 (454)
T ss_dssp             SSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH---HHH--HHHHTCCCCCCTTSCHHHHHHH
T ss_pred             CCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHH---HHH--HHHcCCCCCCCCCCCHHHHHHH
Confidence            2346778888                          7 999987654322   111  0111111122334556688999


Q ss_pred             HHcccccCCCCCCHHHHHHHHHhccCC
Q 039505          311 MASVSSKVNRRPLMNQVVMVREQGNGS  337 (342)
Q Consensus       311 ~~Cl~~~P~~RPsm~eV~~~L~~i~~~  337 (342)
                      .+||+.+|++|||+.+|++.|+.+...
T Consensus       419 ~~cl~~dp~~RPt~~~i~~~L~~~~~~  445 (454)
T 1qcf_A          419 MRCWKNRPEERPTFEYIQSVLDDFYTA  445 (454)
T ss_dssp             HHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred             HHHccCChhHCcCHHHHHHHHHHHHhc
Confidence            999999999999999999999998654

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.84  E-value=4.4e-21  Score=173.25  Aligned_cols=169  Identities=17%  Similarity=0.182  Sum_probs=114.5

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCCc---c--------------EE-EeeCC---cEEE--E--
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGHV---P--------------IV-ECHVG---ALIT--I--  212 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~~---~--------------Lv-~c~~~---~lv~--m--  212 (342)
                      ++|.  +.||+|+||+||+|.+.++ .||||+++........   +              ++ +|...   ++|+  +  
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   87 (268)
T 3sxs_A            8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISN   87 (268)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTT
T ss_pred             hheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCC
Confidence            3444  8999999999999999888 9999999765422111   1              44 55444   3444  1  


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCccccCCCCCc---------cccc
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH---------MSTT  258 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~~~~~~~~~~---------~~~~  258 (342)
                                               +++||+|||+   .+|+||||||+|||++.+..+...+++..         ....
T Consensus        88 ~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~  164 (268)
T 3sxs_A           88 GCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVG  164 (268)
T ss_dssp             CBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCS
T ss_pred             CcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcccC
Confidence                                     8899999999   99999999999999998844333333321         1122


Q ss_pred             cccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHH
Q 039505          259 IAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAM  311 (342)
Q Consensus       259 ~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~  311 (342)
                      ..||+.|+|                          | |+.|+.......  ....  +.. ......+......+.+++.
T Consensus       165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~--~~~-~~~~~~~~~~~~~l~~li~  239 (268)
T 3sxs_A          165 TKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE--VVLK--VSQ-GHRLYRPHLASDTIYQIMY  239 (268)
T ss_dssp             CCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH--HHHH--HHT-TCCCCCCTTSCHHHHHHHH
T ss_pred             CCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH--HHHH--HHc-CCCCCCCCcChHHHHHHHH
Confidence            345667887                          7 999987654322  0000  000 0001112222345888999


Q ss_pred             HcccccCCCCCCHHHHHHHHHhccCC
Q 039505          312 ASVSSKVNRRPLMNQVVMVREQGNGS  337 (342)
Q Consensus       312 ~Cl~~~P~~RPsm~eV~~~L~~i~~~  337 (342)
                      .||+.+|++|||+.|+++.|+.+++.
T Consensus       240 ~~l~~~p~~Rps~~~ll~~L~~l~~~  265 (268)
T 3sxs_A          240 SCWHELPEKRPTFQQLLSSIEPLREK  265 (268)
T ss_dssp             HTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred             HHcCCChhhCcCHHHHHHHHHHhhhc
Confidence            99999999999999999999999765

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.84  E-value=3.4e-21  Score=187.82  Aligned_cols=168  Identities=15%  Similarity=0.155  Sum_probs=116.6

Q ss_pred             cccCcCCCeeEEEEEECCCeEEEEEccCCCCCCC--cc--------------EE-EeeCC----cEEE--E---------
Q 039505          165 RVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGH--VP--------------IV-ECHVG----ALIT--I---------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~~vAVK~l~~~~~~~~--~~--------------Lv-~c~~~----~lv~--m---------  212 (342)
                      +.||+|+||.||+|.+.+..||||+++.......  .+              ++ +|...    ++|+  +         
T Consensus       199 ~~lG~G~fg~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l  278 (450)
T 1k9a_A          199 QTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL  278 (450)
T ss_dssp             EEEEECSSEEEEEEEETTEEEEEEEESSCTTSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBHHHHH
T ss_pred             eeecCcCCeeEEEEEecCCeEEEEEeCCchHHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcHHHHH
Confidence            8999999999999999755999999986542110  01              44 44432    4444  2         


Q ss_pred             -------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc---ccccccCcceee-
Q 039505          213 -------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM---STTIAGTAGFLN-  267 (342)
Q Consensus       213 -------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~---~~~~~Gt~~y~a-  267 (342)
                                         +++||+|||+   .+|+||||||+|||++++  .++.+++.....   .....+++.|+| 
T Consensus       279 ~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~y~aP  355 (450)
T 1k9a_A          279 RSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAP  355 (450)
T ss_dssp             HHHCTTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTSCEEECCCTTCEECC------CCCTTTSCH
T ss_pred             HhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCCCCCcceeCH
Confidence                               8999999999   999999999999999988  455554433211   122456788888 


Q ss_pred             -------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCC
Q 039505          268 -------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRR  321 (342)
Q Consensus       268 -------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~R  321 (342)
                                               | |+.|+.......   +..  .+........+..+...+.+++.+||+.+|++|
T Consensus       356 E~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~---~~~--~i~~~~~~~~p~~~~~~l~~li~~cl~~dp~~R  430 (450)
T 1k9a_A          356 EALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVP--RVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATR  430 (450)
T ss_dssp             HHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT---HHH--HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             HHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHH--HHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHC
Confidence                                     6 999987654322   111  111111122334455678899999999999999


Q ss_pred             CCHHHHHHHHHhccCCCCC
Q 039505          322 PLMNQVVMVREQGNGSRIT  340 (342)
Q Consensus       322 Psm~eV~~~L~~i~~~~~~  340 (342)
                      ||+.++++.|+.+....+.
T Consensus       431 pt~~~l~~~L~~i~~~~l~  449 (450)
T 1k9a_A          431 PTFLQLREQLEHIRTHELH  449 (450)
T ss_dssp             CCHHHHHHHHHHHHHTTTT
T ss_pred             cCHHHHHHHHHHHHHhhcc
Confidence            9999999999998876553

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.84  E-value=6.1e-21  Score=177.72  Aligned_cols=174  Identities=16%  Similarity=0.148  Sum_probs=118.3

Q ss_pred             CCCCHHHHHHHhhc----------cC--cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCCCcc--------------
Q 039505          149 KNNALELSLRVTNN----------FE--RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQGHVP--------------  200 (342)
Q Consensus       149 ~~~~~~~l~~at~~----------f~--~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~~~~--------------  200 (342)
                      ..++++++.++++.          |.  +.||+|+||.||+|+... + .||||++..........              
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~  102 (321)
T 2c30_A           23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF  102 (321)
T ss_dssp             --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred             CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence            45788899888875          33  689999999999999874 4 99999997654332221              


Q ss_pred             ----EE-EeeCC---cEEE--E-------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--
Q 039505          201 ----IV-ECHVG---ALIT--I-------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--  243 (342)
Q Consensus       201 ----Lv-~c~~~---~lv~--m-------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--  243 (342)
                          ++ +|..+   ++|+  +                         +++||+|||+   .+|+||||||+|||++.+  
T Consensus       103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~  179 (321)
T 2c30_A          103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHA---QGVIHRDIKSDSILLTLDGR  179 (321)
T ss_dssp             TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCC
T ss_pred             CcceEEEEEEECCEEEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCc
Confidence                33 44333   4444  2                         8899999999   999999999999999988  


Q ss_pred             CccccCCCCCc------cccccccCcceee--------------------------cCCCCcccccccccccccc-cccc
Q 039505          244 SRISPVEGGTH------MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRD-KSTV  290 (342)
Q Consensus       244 a~~~~~~~~~~------~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~-~~~~  290 (342)
                      .++.+++....      ......||+.|+|                          ||+.|+.......  .+.. ....
T Consensus       180 ~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~--~~~~~~~~~  257 (321)
T 2c30_A          180 VKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQ--AMKRLRDSP  257 (321)
T ss_dssp             EEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHSS
T ss_pred             EEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHhcCC
Confidence            34444433211      1234679999998                          8888887543221  0000 1111


Q ss_pred             cccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          291 DLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       291 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      .+.+.  ........+.+++.+||+.+|++|||+.|+++
T Consensus       258 ~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  294 (321)
T 2c30_A          258 PPKLK--NSHKVSPVLRDFLERMLVRDPQERATAQELLD  294 (321)
T ss_dssp             CCCCT--TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CCCcC--ccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            11111  12223455888999999999999999999986

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.84  E-value=8.3e-22  Score=182.62  Aligned_cols=159  Identities=13%  Similarity=0.098  Sum_probs=105.5

Q ss_pred             hccC--cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCCCcc---------------------EE-EeeCC---cEEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQGHVP---------------------IV-ECHVG---ALIT  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~~~~---------------------Lv-~c~~~---~lv~  211 (342)
                      ++|.  +.||+|+||+||+|++.. + .||||++..........                     ++ +|.++   ++|+
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~  136 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT  136 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence            4566  899999999999999974 4 99999986543221111                     44 55554   4555


Q ss_pred             --E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-----cc
Q 039505          212 --I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-----MS  256 (342)
Q Consensus       212 --m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-----~~  256 (342)
                        +                          ++.||+|||+   .+|+||||||+|||++.+  .++.+++....     ..
T Consensus       137 e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~  213 (311)
T 3p1a_A          137 ELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAG  213 (311)
T ss_dssp             ECCCCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECGGGCEEECCCTTCEECC-----
T ss_pred             eccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEccceeeeecccCCCC
Confidence              2                          8999999999   899999999999999988  55555443211     12


Q ss_pred             cccccCcceee-------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHH
Q 039505          257 TTIAGTAGFLN-------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAM  311 (342)
Q Consensus       257 ~~~~Gt~~y~a-------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~  311 (342)
                      ....||++|+|                         ||..|+.......       .+.........+......+.+++.
T Consensus       214 ~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~li~  286 (311)
T 3p1a_A          214 EVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGEGWQ-------QLRQGYLPPEFTAGLSSELRSVLV  286 (311)
T ss_dssp             -CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHH-------HHTTTCCCHHHHTTSCHHHHHHHH
T ss_pred             cccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH-------HHhccCCCcccccCCCHHHHHHHH
Confidence            33569999998                         4543333211100       011111111111123456889999


Q ss_pred             HcccccCCCCCCHHHHHH
Q 039505          312 ASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       312 ~Cl~~~P~~RPsm~eV~~  329 (342)
                      +||+.+|++|||+.|+++
T Consensus       287 ~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          287 MMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             HHSCSSTTTSCCHHHHHT
T ss_pred             HHcCCChhhCcCHHHHHh
Confidence            999999999999999985

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.84  E-value=2.5e-21  Score=175.12  Aligned_cols=166  Identities=16%  Similarity=0.181  Sum_probs=113.5

Q ss_pred             cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCCc---c--------------EE-EeeCC---cEEE--E--------
Q 039505          165 RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGHV---P--------------IV-ECHVG---ALIT--I--------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~~---~--------------Lv-~c~~~---~lv~--m--------  212 (342)
                      +.||+|+||+||+|.+.++ .||||++.........   +              ++ +|...   ++++  +        
T Consensus        16 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   95 (269)
T 4hcu_A           16 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY   95 (269)
T ss_dssp             EEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHH
T ss_pred             heecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHHHH
Confidence            8999999999999999877 9999999765422111   1              44 44443   4444  2        


Q ss_pred             -------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-------cccccccCcc
Q 039505          213 -------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-------MSTTIAGTAG  264 (342)
Q Consensus       213 -------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-------~~~~~~Gt~~  264 (342)
                                         +++||+|||+   .+|+||||||+|||++.+  .++.+++....       ......||+.
T Consensus        96 l~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~  172 (269)
T 4hcu_A           96 LRTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK  172 (269)
T ss_dssp             HHTTTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGG
T ss_pred             HHhcCcccCHHHHHHHHHHHHHHHHHHHh---CCeecCCcchheEEEcCCCCEEeccccccccccccccccccCcccccc
Confidence                               8899999999   999999999999999887  34444332211       1122456777


Q ss_pred             eee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHccccc
Q 039505          265 FLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSK  317 (342)
Q Consensus       265 y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~  317 (342)
                      |+|                          | |+.|+.......   +.. .+.. ......+......+.+++..||+.+
T Consensus       173 y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~---~~~-~~~~-~~~~~~~~~~~~~~~~li~~~l~~~  247 (269)
T 4hcu_A          173 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---VVE-DIST-GFRLYKPRLASTHVYQIMNHCWRER  247 (269)
T ss_dssp             GCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH---HHH-HHHT-TCCCCCCTTSCHHHHHHHHHHTCSS
T ss_pred             cCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHH---HHH-HHhc-CccCCCCCcCCHHHHHHHHHHccCC
Confidence            888                          6 899987654322   111 0000 1111112223455889999999999


Q ss_pred             CCCCCCHHHHHHHHHhccCCC
Q 039505          318 VNRRPLMNQVVMVREQGNGSR  338 (342)
Q Consensus       318 P~~RPsm~eV~~~L~~i~~~~  338 (342)
                      |++|||+.|+++.|+++.++.
T Consensus       248 p~~Rps~~~ll~~l~~l~~~g  268 (269)
T 4hcu_A          248 PEDRPAFSRLLRQLAEIAESG  268 (269)
T ss_dssp             GGGSCCHHHHHHHHHHHHHC-
T ss_pred             cccCcCHHHHHHHHHHHHHcc
Confidence            999999999999999987653

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.84  E-value=1.7e-21  Score=185.48  Aligned_cols=168  Identities=15%  Similarity=0.181  Sum_probs=114.3

Q ss_pred             hccC--cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCC-----Ccc--------------EE-EeeCC---cEEE--
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQG-----HVP--------------IV-ECHVG---ALIT--  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~-----~~~--------------Lv-~c~~~---~lv~--  211 (342)
                      ++|.  +.||+|+||.||+|.+.. + .||||+++......     .++              ++ +|...   ++|+  
T Consensus       114 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~  193 (377)
T 3cbl_A          114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMEL  193 (377)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             HHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEc
Confidence            3455  899999999999999974 4 99999987542211     111              44 55443   4444  


Q ss_pred             E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCccc------
Q 039505          212 I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHMS------  256 (342)
Q Consensus       212 m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~~------  256 (342)
                      +                           +++||+|||+   .+|+||||||+|||++++  .++.+++......      
T Consensus       194 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~  270 (377)
T 3cbl_A          194 VQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAA  270 (377)
T ss_dssp             CTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEEC
T ss_pred             CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceee
Confidence            2                           8899999999   999999999999999988  4444443321110      


Q ss_pred             --cccccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHH
Q 039505          257 --TTIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAV  307 (342)
Q Consensus       257 --~~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~  307 (342)
                        ....+++.|+|                          | |+.|+........     .+.+........+..++..+.
T Consensus       271 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~  345 (377)
T 3cbl_A          271 SGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT-----REFVEKGGRLPCPELCPDAVF  345 (377)
T ss_dssp             CSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHH-----HHHHHTTCCCCCCTTCCHHHH
T ss_pred             cCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH-----HHHHHcCCCCCCCCCCCHHHH
Confidence              11234567887                          6 9999876543221     111111111122333455688


Q ss_pred             HHHHHcccccCCCCCCHHHHHHHHHhccC
Q 039505          308 EIAMASVSSKVNRRPLMNQVVMVREQGNG  336 (342)
Q Consensus       308 ~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~  336 (342)
                      +++.+||+.+|++|||+.++++.|+.+++
T Consensus       346 ~li~~cl~~dP~~Rps~~~i~~~L~~i~~  374 (377)
T 3cbl_A          346 RLMEQCWAYEPGQRPSFSTIYQELQSIRK  374 (377)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence            99999999999999999999999998865

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.84  E-value=6e-21  Score=172.48  Aligned_cols=166  Identities=19%  Similarity=0.211  Sum_probs=105.5

Q ss_pred             cccCcCCCeeEEEEEECCCeEEEEEccCCCCCCCcc----------------------EE-EeeCC---cEEE--E----
Q 039505          165 RVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGHVP----------------------IV-ECHVG---ALIT--I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~~vAVK~l~~~~~~~~~~----------------------Lv-~c~~~---~lv~--m----  212 (342)
                      +.||+|+||.||+|.+.+..||||++..........                      ++ +|..+   ++++  +    
T Consensus        13 ~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   92 (271)
T 3dtc_A           13 EIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGP   92 (271)
T ss_dssp             EEEEEETTEEEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTTEE
T ss_pred             eeeccCCCeEEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCCCC
Confidence            899999999999999875599999987654322110                      44 55444   4444  2    


Q ss_pred             ---------------------ehhhhhhhhccCCCCeeeCCCCcceEEecC--------C--CccccCCCCCc----ccc
Q 039505          213 ---------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNE--------K--SRISPVEGGTH----MST  257 (342)
Q Consensus       213 ---------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~--------~--a~~~~~~~~~~----~~~  257 (342)
                                           +++||+|||+....+|+||||||+|||++.        +  .++.+++....    ...
T Consensus        93 L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~  172 (271)
T 3dtc_A           93 LNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKM  172 (271)
T ss_dssp             HHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC----------
T ss_pred             HHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCccccccccccc
Confidence                                 899999999922223999999999999986        2  34444443321    122


Q ss_pred             ccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHH
Q 039505          258 TIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAM  311 (342)
Q Consensus       258 ~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~  311 (342)
                      ...||+.|+|                          ||+.|+.......  ..  ............+......+.+++.
T Consensus       173 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~li~  248 (271)
T 3dtc_A          173 SAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLA--VA--YGVAMNKLALPIPSTCPEPFAKLME  248 (271)
T ss_dssp             ---CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHH--HH--HHHHTSCCCCCCCTTCCHHHHHHHH
T ss_pred             CCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HH--HhhhcCCCCCCCCcccCHHHHHHHH
Confidence            3578999988                          9999987654322  00  0111111112223344456889999


Q ss_pred             HcccccCCCCCCHHHHHHHHHhc
Q 039505          312 ASVSSKVNRRPLMNQVVMVREQG  334 (342)
Q Consensus       312 ~Cl~~~P~~RPsm~eV~~~L~~i  334 (342)
                      +||+.+|++|||+.|+++.|+.+
T Consensus       249 ~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          249 DCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             HHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             HHhcCCcccCcCHHHHHHHHhcC
Confidence            99999999999999999999864

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.83  E-value=3e-21  Score=176.77  Aligned_cols=172  Identities=13%  Similarity=0.143  Sum_probs=113.1

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc--c---------------EE-EeeCC---cEEE--E-
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV--P---------------IV-ECHVG---ALIT--I-  212 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~--~---------------Lv-~c~~~---~lv~--m-  212 (342)
                      ++|.  +.||+|+||.||+|....+  .||||++.........  +               ++ ++..+   ++++  + 
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~   89 (298)
T 1csn_A           10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLG   89 (298)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECCC
T ss_pred             cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEecC
Confidence            3455  8999999999999997544  9999998754332211  1               44 44443   3333  1 


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-------CccccCCCCCc------
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-------SRISPVEGGTH------  254 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-------a~~~~~~~~~~------  254 (342)
                                               +++||+|||+   .+|+||||||+|||++.+       .++.+++....      
T Consensus        90 ~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~  166 (298)
T 1csn_A           90 PSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVT  166 (298)
T ss_dssp             CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTT
T ss_pred             CCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccc
Confidence                                     8999999999   999999999999999865       33444333211      


Q ss_pred             -------cccccccCcceee--------------------------cCCCCcccccccccccccc---cccccccCCCCC
Q 039505          255 -------MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRD---KSTVDLSFKGEF  298 (342)
Q Consensus       255 -------~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~---~~~~d~~l~~~~  298 (342)
                             ......||+.|+|                          ||+.||.............   .....+.. ...
T Consensus       167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~  245 (298)
T 1csn_A          167 KQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPL-REL  245 (298)
T ss_dssp             CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCH-HHH
T ss_pred             cccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccH-HHH
Confidence                   1233569999998                          8999987643221001110   00000000 000


Q ss_pred             ChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccC
Q 039505          299 DIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNG  336 (342)
Q Consensus       299 ~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~  336 (342)
                      .......+.+++..||+.+|++||++.+|++.|+++.+
T Consensus       246 ~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~  283 (298)
T 1csn_A          246 CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLE  283 (298)
T ss_dssp             TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred             HhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHH
Confidence            11234568899999999999999999999999988754

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.83  E-value=1.1e-20  Score=172.74  Aligned_cols=174  Identities=16%  Similarity=0.194  Sum_probs=110.0

Q ss_pred             HhhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc----------------EE-Ee-eCC---cEEE--
Q 039505          159 VTNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP----------------IV-EC-HVG---ALIT--  211 (342)
Q Consensus       159 at~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~----------------Lv-~c-~~~---~lv~--  211 (342)
                      ..++|.  +.||+|+||+||+|+....  .||||++..........                .+ +| ..+   ++++  
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~   86 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL   86 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEc
Confidence            445676  8999999999999998544  99999876543322211                22 22 222   3333  


Q ss_pred             E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEe---cCC--CccccCCCCCc------
Q 039505          212 I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILL---NEK--SRISPVEGGTH------  254 (342)
Q Consensus       212 m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILL---d~~--a~~~~~~~~~~------  254 (342)
                      +                          +++||+|||+   .+|+||||||+|||+   +++  .++.+++....      
T Consensus        87 ~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~  163 (296)
T 4hgt_A           87 LGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART  163 (296)
T ss_dssp             CCCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred             cCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCccc
Confidence            1                          8999999999   999999999999999   455  34444433211      


Q ss_pred             -------cccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCC---C
Q 039505          255 -------MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGE---F  298 (342)
Q Consensus       255 -------~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~---~  298 (342)
                             ......||+.|+|                          ||+.||............. .+........   .
T Consensus       164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~  242 (296)
T 4hgt_A          164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYE-RISEKKMSTPIEVL  242 (296)
T ss_dssp             CCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHH-HHHHHHHHSCHHHH
T ss_pred             CccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhh-hhhcccccchhhhh
Confidence                   1123578999998                          8999987654322101111 0000000000   0


Q ss_pred             ChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccC
Q 039505          299 DIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNG  336 (342)
Q Consensus       299 ~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~  336 (342)
                      .......+.+++..||+.+|++|||+.+|++.|+.+..
T Consensus       243 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~  280 (296)
T 4hgt_A          243 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH  280 (296)
T ss_dssp             TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHH
T ss_pred             hccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHH
Confidence            01123468899999999999999999999999988753

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.83  E-value=9.3e-21  Score=176.47  Aligned_cols=180  Identities=18%  Similarity=0.218  Sum_probs=113.9

Q ss_pred             HhhccC--cccCcCCCeeEEEEEECCCeEEEEEccCCCCCCC--------------cc---EE-EeeCC-------cEEE
Q 039505          159 VTNNFE--RVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGH--------------VP---IV-ECHVG-------ALIT  211 (342)
Q Consensus       159 at~~f~--~~lG~G~fG~Vykg~~~~~~vAVK~l~~~~~~~~--------------~~---Lv-~c~~~-------~lv~  211 (342)
                      ..++|.  +.||+|+||.||+|++.+..||||++........              ..   ++ ++...       ++|+
T Consensus        35 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~  114 (337)
T 3mdy_A           35 IAKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLIT  114 (337)
T ss_dssp             HHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEE
T ss_pred             cccceEEEeEeecCCCeEEEEEEECCceEEEEEEeccccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEE
Confidence            345666  9999999999999998755999999854321100              00   33 33221       3333


Q ss_pred             --E-------------------------ehhhhhhhhccC-----CCCeeeCCCCcceEEecCC--CccccCCCCCcc--
Q 039505          212 --I-------------------------PKEGLEYLHQGL-----KHPIIQRDMKSTNILLNEK--SRISPVEGGTHM--  255 (342)
Q Consensus       212 --m-------------------------ia~gL~yLH~~~-----~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~--  255 (342)
                        +                         ++.||+|||+.+     .++|+||||||+|||++.+  .++.+++.....  
T Consensus       115 e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~  194 (337)
T 3mdy_A          115 DYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFIS  194 (337)
T ss_dssp             CCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEECC-
T ss_pred             eccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceeecc
Confidence              1                         899999999821     1299999999999999988  444444432110  


Q ss_pred             --------ccccccCcceee--------------------------------cC----------CCCccccccccc--cc
Q 039505          256 --------STTIAGTAGFLN--------------------------------TK----------NPVISKSIENGN--SH  283 (342)
Q Consensus       256 --------~~~~~Gt~~y~a--------------------------------tG----------~~P~~~~~~~~~--~~  283 (342)
                              .....||+.|+|                                ||          +.|+........  ..
T Consensus       195 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~  274 (337)
T 3mdy_A          195 DTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYED  274 (337)
T ss_dssp             --------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHH
T ss_pred             ccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhh
Confidence                    113478999998                                55          333332211110  00


Q ss_pred             c---cccccccccCCCCC-ChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccCCC
Q 039505          284 L---RDKSTVDLSFKGEF-DIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNGSR  338 (342)
Q Consensus       284 l---~~~~~~d~~l~~~~-~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~~~  338 (342)
                      +   +......+.+.... ...+...+.+++.+||+.+|++|||+.||++.|+.+.++.
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~  333 (337)
T 3mdy_A          275 MREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ  333 (337)
T ss_dssp             HHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred             hHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence            0   00111112121111 2256778999999999999999999999999999987764

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.83  E-value=8.8e-21  Score=172.61  Aligned_cols=167  Identities=17%  Similarity=0.197  Sum_probs=110.9

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCCc---c--------------EE-EeeCC---cEEE--E---
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGHV---P--------------IV-ECHVG---ALIT--I---  212 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~~---~--------------Lv-~c~~~---~lv~--m---  212 (342)
                      +|.  +.||+|+||+||+|.+.++ .||||+++........   +              ++ +|...   ++|+  +   
T Consensus        25 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  104 (283)
T 3gen_A           25 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANG  104 (283)
T ss_dssp             GEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTC
T ss_pred             HHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCC
Confidence            454  8999999999999999988 9999999765322111   1              44 45443   3443  1   


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCccccCCCCCcc---------cccc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTHM---------STTI  259 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~~~~~~~~~~~---------~~~~  259 (342)
                                              +++||+|||+   .+|+||||||+|||++++.++...+++...         ....
T Consensus       105 ~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  181 (283)
T 3gen_A          105 CLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS  181 (283)
T ss_dssp             BHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTST
T ss_pred             cHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCccceEEEcCCCCEEEccccccccccccccccccCC
Confidence                                    8899999999   999999999999999988444333333221         1224


Q ss_pred             ccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHH
Q 039505          260 AGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMA  312 (342)
Q Consensus       260 ~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~  312 (342)
                      .||+.|+|                          | |+.|+.......   ...  .+........+......+.+++.+
T Consensus       182 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~l~~li~~  256 (283)
T 3gen_A          182 KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE---TAE--HIAQGLRLYRPHLASEKVYTIMYS  256 (283)
T ss_dssp             TSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH---HHH--HHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred             ccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhH---HHH--HHhcccCCCCCCcCCHHHHHHHHH
Confidence            56677887                          7 999987654322   000  011111111122233568899999


Q ss_pred             cccccCCCCCCHHHHHHHHHhccC
Q 039505          313 SVSSKVNRRPLMNQVVMVREQGNG  336 (342)
Q Consensus       313 Cl~~~P~~RPsm~eV~~~L~~i~~  336 (342)
                      ||+.+|++|||+.++++.|+++.+
T Consensus       257 ~l~~~p~~Rps~~~ll~~L~~~~~  280 (283)
T 3gen_A          257 CWHEKADERPTFKILLSNILDVMD  280 (283)
T ss_dssp             TTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HccCChhHCcCHHHHHHHHHHHhh
Confidence            999999999999999999988754

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.83  E-value=6.9e-21  Score=177.81  Aligned_cols=168  Identities=18%  Similarity=0.236  Sum_probs=111.4

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC------eEEEEEccCCCCCCCcc-------------------EE-EeeCC--cEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS------EVAMKMLSPSSSQGHVP-------------------IV-ECHVG--ALI  210 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~------~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~--~lv  210 (342)
                      ++|.  +.||+|+||+||+|++...      .||+|.+..........                   ++ +|..+  .++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~v   94 (327)
T 3lzb_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI   94 (327)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSSEEEE
T ss_pred             hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCCceEE
Confidence            3455  8999999999999997543      36888876543322211                   33 45444  333


Q ss_pred             E--E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-----
Q 039505          211 T--I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-----  254 (342)
Q Consensus       211 ~--m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-----  254 (342)
                      +  +                           +++||+|||+   .+|+||||||+|||++.+  .++.+++....     
T Consensus        95 ~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~  171 (327)
T 3lzb_A           95 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE  171 (327)
T ss_dssp             ECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTC--------
T ss_pred             EEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---CCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCcc
Confidence            3  1                           8999999999   999999999999999987  44444433221     


Q ss_pred             ---cccccccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHH
Q 039505          255 ---MSTTIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVG  304 (342)
Q Consensus       255 ---~~~~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~  304 (342)
                         ......||+.|+|                          | |+.||..........     .+........+.....
T Consensus       172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~  246 (327)
T 3lzb_A          172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS-----ILEKGERLPQPPICTI  246 (327)
T ss_dssp             --------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH-----HHHTTCCCCCCTTBCH
T ss_pred             ccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH-----HHHcCCCCCCCccCCH
Confidence               1122456778888                          7 999997654332111     1111111122333445


Q ss_pred             HHHHHHHHcccccCCCCCCHHHHHHHHHhccC
Q 039505          305 KAVEIAMASVSSKVNRRPLMNQVVMVREQGNG  336 (342)
Q Consensus       305 ~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~  336 (342)
                      .+.+++.+||+.+|++||++.|+++.|+.+..
T Consensus       247 ~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  278 (327)
T 3lzb_A          247 DVYMIMRKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            68899999999999999999999999998764

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.83  E-value=1.1e-20  Score=179.62  Aligned_cols=115  Identities=16%  Similarity=0.145  Sum_probs=80.7

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc--------cccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH--------MSTTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~--------~~~~~~Gt~~y~a---------------  267 (342)
                      +++||+|||+   .+|+||||||+|||++.+  .++.+++....        ......||+.|+|               
T Consensus       212 i~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv  288 (370)
T 2psq_A          212 LARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV  288 (370)
T ss_dssp             HHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHH
T ss_pred             HHHHHHHHHh---CCeeccccchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHH
Confidence            7889999999   999999999999999988  44444443211        1123457788998               


Q ss_pred             -----------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhcc
Q 039505          268 -----------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       268 -----------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                                 | |+.|+.......   +..  .+........+..+...+.+++.+||+.+|++|||+.|+++.|+.+.
T Consensus       289 wslG~il~ellt~g~~p~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il  363 (370)
T 2psq_A          289 WSFGVLMWEIFTLGGSPYPGIPVEE---LFK--LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL  363 (370)
T ss_dssp             HHHHHHHHHHHTTSCCSSTTCCGGG---HHH--HHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCCCCCCHHH---HHH--HHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence                       7 899987643222   111  11111112223344556889999999999999999999999999874

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.83  E-value=7.4e-21  Score=187.68  Aligned_cols=168  Identities=17%  Similarity=0.159  Sum_probs=117.4

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc---c--------------EE-EeeCC---cEEE--E-
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV---P--------------IV-ECHVG---ALIT--I-  212 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~---~--------------Lv-~c~~~---~lv~--m-  212 (342)
                      ++|.  +.||+|+||.||+|.+...  .||||+++........   +              ++ +|...   ++|+  + 
T Consensus       220 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~  299 (495)
T 1opk_A          220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT  299 (495)
T ss_dssp             GGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             HHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccC
Confidence            3444  8999999999999999864  8999999765422111   1              44 55544   4554  2 


Q ss_pred             ---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-------cc
Q 039505          213 ---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-------MS  256 (342)
Q Consensus       213 ---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-------~~  256 (342)
                                                 +++||+|||+   .+|+||||||+|||++++  .++.+++....       ..
T Consensus       300 ~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  376 (495)
T 1opk_A          300 YGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH  376 (495)
T ss_dssp             TCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECC
T ss_pred             CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChhhEEECCCCcEEEeecccceeccCCceeec
Confidence                                       8899999999   999999999999999987  45554443211       11


Q ss_pred             cccccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHH
Q 039505          257 TTIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEI  309 (342)
Q Consensus       257 ~~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l  309 (342)
                      ....+++.|+|                          | |+.|+.......   +  .+.+........+..+...+.++
T Consensus       377 ~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~l~~l  451 (495)
T 1opk_A          377 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---V--YELLEKDYRMERPEGCPEKVYEL  451 (495)
T ss_dssp             TTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---H--HHHHHTTCCCCCCTTCCHHHHHH
T ss_pred             CCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH---H--HHHHHcCCCCCCCCCCCHHHHHH
Confidence            22346678888                          6 899987654222   1  11122222222334455678899


Q ss_pred             HHHcccccCCCCCCHHHHHHHHHhccC
Q 039505          310 AMASVSSKVNRRPLMNQVVMVREQGNG  336 (342)
Q Consensus       310 ~~~Cl~~~P~~RPsm~eV~~~L~~i~~  336 (342)
                      +.+||+.+|++|||+.+|++.|+.+..
T Consensus       452 i~~cl~~dP~~RPs~~el~~~L~~~~~  478 (495)
T 1opk_A          452 MRACWQWNPSDRPSFAEIHQAFETMFQ  478 (495)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred             HHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence            999999999999999999999998754

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.83  E-value=6.1e-21  Score=176.42  Aligned_cols=169  Identities=19%  Similarity=0.235  Sum_probs=110.3

Q ss_pred             cccCcCCCeeEEEEEECCCeEEEEEccCCCCCCC--cc--------------EE-EeeCC-cEEE--E------------
Q 039505          165 RVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGH--VP--------------IV-ECHVG-ALIT--I------------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~~vAVK~l~~~~~~~~--~~--------------Lv-~c~~~-~lv~--m------------  212 (342)
                      +.||+|+||+||+|.+.+..||||++........  .+              ++ +|.+. ++|+  +            
T Consensus        14 ~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~lv~e~~~~~~L~~~l~~~   93 (307)
T 2eva_A           14 EVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLNPVCLVMEYAEGGSLYNVLHGA   93 (307)
T ss_dssp             EEEECCSSSEEEEEEETTEEEEEEECSSTTHHHHHHHHHHHHHHCCCTTBCCEEEBCTTTTEEEEECCTTCBHHHHHHCS
T ss_pred             eEeecCCCceEEEEEECCeeEEEEEecChhHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCcEEEEEcCCCCCHHHHHhcc
Confidence            8999999999999998755999999965321100  01              22 33222 3333  1            


Q ss_pred             -----------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC---CccccCCCCCcc---ccccccCcceee--
Q 039505          213 -----------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK---SRISPVEGGTHM---STTIAGTAGFLN--  267 (342)
Q Consensus       213 -----------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~---a~~~~~~~~~~~---~~~~~Gt~~y~a--  267 (342)
                                       +++||+|||+....+|+||||||+|||++.+   .++.+++.....   .....||+.|+|  
T Consensus        94 ~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE  173 (307)
T 2eva_A           94 EPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPE  173 (307)
T ss_dssp             SSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------------CCTTSSCHH
T ss_pred             CCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccccccCCCCCceEChh
Confidence                             7899999999655789999999999999877   355555443221   233568999998  


Q ss_pred             ------------------------cCCCCcccccccccccccc-cccccccCCCCCChHHHHHHHHHHHHcccccCCCCC
Q 039505          268 ------------------------TKNPVISKSIENGNSHLRD-KSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRP  322 (342)
Q Consensus       268 ------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RP  322 (342)
                                              ||+.|+............. .....+..    .......+.+++.+||+.+|++||
T Consensus       174 ~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rp  249 (307)
T 2eva_A          174 VFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPL----IKNLPKPIESLMTRCWSKDPSQRP  249 (307)
T ss_dssp             HHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCC----BTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             hhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCc----ccccCHHHHHHHHHHhcCChhhCc
Confidence                                    8999987543221000000 01111111    223345588999999999999999


Q ss_pred             CHHHHHHHHHhccCC
Q 039505          323 LMNQVVMVREQGNGS  337 (342)
Q Consensus       323 sm~eV~~~L~~i~~~  337 (342)
                      |+.++++.|+.+...
T Consensus       250 s~~ell~~L~~~~~~  264 (307)
T 2eva_A          250 SMEEIVKIMTHLMRY  264 (307)
T ss_dssp             CHHHHHHHHHHHGGG
T ss_pred             CHHHHHHHHHHHHHh
Confidence            999999999987653

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.83  E-value=7.9e-21  Score=185.34  Aligned_cols=169  Identities=15%  Similarity=0.192  Sum_probs=116.3

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCC---cc--------------EE-EeeCC--cEEE--E---
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGH---VP--------------IV-ECHVG--ALIT--I---  212 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~---~~--------------Lv-~c~~~--~lv~--m---  212 (342)
                      ++|.  +.||+|+||+||+|.+.++ .||||+++.......   ++              ++ +|..+  ++|+  +   
T Consensus       184 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~iv~e~~~~g  263 (452)
T 1fmk_A          184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKG  263 (452)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCTTC
T ss_pred             hHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcCCceEEEehhhcCC
Confidence            3454  8899999999999999887 999999986542211   11              44 55444  4444  2   


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc-------ccc
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM-------STT  258 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~-------~~~  258 (342)
                                               +++||+|||+   .+|+||||||+|||++++  .++.+++.....       ...
T Consensus       264 sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~  340 (452)
T 1fmk_A          264 SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG  340 (452)
T ss_dssp             BHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC------------
T ss_pred             CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEECCCCCEEECCCccceecCCCceecccC
Confidence                                     8999999999   999999999999999987  455554433211       122


Q ss_pred             cccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHH
Q 039505          259 IAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAM  311 (342)
Q Consensus       259 ~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~  311 (342)
                      ..+++.|+|                          | |+.|+.......   +..  .+........+..+...+.+++.
T Consensus       341 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~---~~~--~i~~~~~~~~~~~~~~~l~~li~  415 (452)
T 1fmk_A          341 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---VLD--QVERGYRMPCPPECPESLHDLMC  415 (452)
T ss_dssp             --CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH---HHH--HHHTTCCCCCCTTSCHHHHHHHH
T ss_pred             CcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH---HHH--HHHcCCCCCCCCCCCHHHHHHHH
Confidence            456778888                          7 899987654221   110  11111112223345566889999


Q ss_pred             HcccccCCCCCCHHHHHHHHHhccCC
Q 039505          312 ASVSSKVNRRPLMNQVVMVREQGNGS  337 (342)
Q Consensus       312 ~Cl~~~P~~RPsm~eV~~~L~~i~~~  337 (342)
                      +||+.+|++|||+.++++.|+.+..+
T Consensus       416 ~cl~~dP~~Rpt~~~l~~~L~~~~~~  441 (452)
T 1fmk_A          416 QCWRKEPEERPTFEYLQAFLEDYFTS  441 (452)
T ss_dssp             HHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred             HHccCChhhCcCHHHHHHHHHHHhcc
Confidence            99999999999999999999998654

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.83  E-value=5.5e-21  Score=180.90  Aligned_cols=167  Identities=17%  Similarity=0.209  Sum_probs=111.0

Q ss_pred             hccC--cccCcCCCeeEEEEEECC------C-eEEEEEccCCCCCCCc-----------------------------cEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVK------S-EVAMKMLSPSSSQGHV-----------------------------PIV  202 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~------~-~vAVK~l~~~~~~~~~-----------------------------~Lv  202 (342)
                      ++|.  +.||+|+||+||+|.+..      + .||||++.........                             .++
T Consensus        35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~  114 (364)
T 3op5_A           35 AAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYW  114 (364)
T ss_dssp             CEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEE
T ss_pred             CeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEE
Confidence            4565  899999999999999864      2 7999998654311000                             033


Q ss_pred             -EeeCC-------cEEE--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEec--CC-
Q 039505          203 -ECHVG-------ALIT--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLN--EK-  243 (342)
Q Consensus       203 -~c~~~-------~lv~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd--~~-  243 (342)
                       +|...       ++|+  +                          +++||+|||+   .+|+||||||+|||++  .+ 
T Consensus       115 ~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~---~~iiHrDlkp~Nill~~~~~~  191 (364)
T 3op5_A          115 GSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHE---HEYVHGDIKASNLLLNYKNPD  191 (364)
T ss_dssp             EEEEEEETTEEEEEEEEECEEEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEESSCTT
T ss_pred             eeeeeccCCcceEEEEEeCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCeEEecCCHHHEEEecCCCC
Confidence             33221       3333  1                          8999999999   8999999999999998  54 


Q ss_pred             -CccccCCCCCcc-------------ccccccCcceee--------------------------cCCCCccccccccccc
Q 039505          244 -SRISPVEGGTHM-------------STTIAGTAGFLN--------------------------TKNPVISKSIENGNSH  283 (342)
Q Consensus       244 -a~~~~~~~~~~~-------------~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~  283 (342)
                       .++.+++.....             .....||+.|+|                          ||+.||.......  .
T Consensus       192 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~--~  269 (364)
T 3op5_A          192 QVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP--K  269 (364)
T ss_dssp             CEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH--H
T ss_pred             eEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH--H
Confidence             344444433110             122459999998                          9999998643222  1


Q ss_pred             ccc----------cccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhcc
Q 039505          284 LRD----------KSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       284 l~~----------~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                      .+.          .+++++.+..   ...+..+.+++..||+.+|++||++.++++.|+.+.
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~  328 (364)
T 3op5_A          270 YVRDSKIRYRENIASLMDKCFPA---ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGL  328 (364)
T ss_dssp             HHHHHHHHHHHCHHHHHHHHSCT---TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhhhHHHHHHHhccc---ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Confidence            111          1222222211   122445888999999999999999999999998764

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.83  E-value=2.7e-21  Score=183.55  Aligned_cols=168  Identities=17%  Similarity=0.168  Sum_probs=111.6

Q ss_pred             hccC--cccCcCCCeeEEEEEECC------C-eEEEEEccCCCCCCCc-----c--------------EE-EeeCC---c
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVK------S-EVAMKMLSPSSSQGHV-----P--------------IV-ECHVG---A  208 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~------~-~vAVK~l~~~~~~~~~-----~--------------Lv-~c~~~---~  208 (342)
                      ++|.  +.||+|+||+||+|++..      + .||||+++........     +              ++ +|...   +
T Consensus        71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  150 (367)
T 3l9p_A           71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF  150 (367)
T ss_dssp             GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence            3454  899999999999999642      2 7999999654221111     0              33 44333   3


Q ss_pred             EEE--E---------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-----Ccccc
Q 039505          209 LIT--I---------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-----SRISP  248 (342)
Q Consensus       209 lv~--m---------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-----a~~~~  248 (342)
                      +|+  +                                 +++||+|||+   .+|+||||||+|||++.+     .++.+
T Consensus       151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kL~D  227 (367)
T 3l9p_A          151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGD  227 (367)
T ss_dssp             EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred             EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEEecCCCCceEEECC
Confidence            333  1                                 7899999999   999999999999999954     33444


Q ss_pred             CCCCC--------ccccccccCcceee--------------------------c-CCCCccccccccccccccccccccc
Q 039505          249 VEGGT--------HMSTTIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLS  293 (342)
Q Consensus       249 ~~~~~--------~~~~~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~  293 (342)
                      ++...        .......||+.|+|                          | |+.|+.......   +..  .+...
T Consensus       228 FG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~---~~~--~i~~~  302 (367)
T 3l9p_A          228 FGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE---VLE--FVTSG  302 (367)
T ss_dssp             CHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH---HHH--HHHTT
T ss_pred             CccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHH--HHHcC
Confidence            33211        11223567889998                          6 889987654322   111  11111


Q ss_pred             CCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccC
Q 039505          294 FKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNG  336 (342)
Q Consensus       294 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~  336 (342)
                      .....+......+.+++.+||+.+|++|||+.+|++.|+.+..
T Consensus       303 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~  345 (367)
T 3l9p_A          303 GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ  345 (367)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence            1111223344568899999999999999999999999988754

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.83  E-value=8.5e-21  Score=173.65  Aligned_cols=167  Identities=22%  Similarity=0.311  Sum_probs=110.1

Q ss_pred             cccCcCCCeeEEEEEECCCeEEEEEccCCCCCCCc------c--------------EE-EeeCC--cEEE--E-------
Q 039505          165 RVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGHV------P--------------IV-ECHVG--ALIT--I-------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~~vAVK~l~~~~~~~~~------~--------------Lv-~c~~~--~lv~--m-------  212 (342)
                      +.||+|+||+||+|++.. .||||+++........      +              ++ ++...  ++++  +       
T Consensus        30 ~~lG~G~~g~Vy~~~~~~-~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~lv~e~~~~~~L~~  108 (289)
T 3og7_A           30 QRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYH  108 (289)
T ss_dssp             EEEEECSSEEEEEEESSS-EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEECCCEEEHHH
T ss_pred             eEecCCCCeEEEEEEEcC-ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCCccEEEEEecCCCcHHH
Confidence            899999999999998755 6999999765432111      0              33 44443  3443  1       


Q ss_pred             --------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc--------cccccccC
Q 039505          213 --------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH--------MSTTIAGT  262 (342)
Q Consensus       213 --------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~--------~~~~~~Gt  262 (342)
                                          +++||+|||+   .+|+||||||+|||++.+  .++.+++....        ......||
T Consensus       109 ~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt  185 (289)
T 3og7_A          109 HLHASETKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGS  185 (289)
T ss_dssp             HHTTC---CCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEECCCC------------------CC
T ss_pred             HHhhccCCCCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEECCCCCEEEccceeccccccccccccccccCCC
Confidence                                8899999999   999999999999999988  44444432211        11235688


Q ss_pred             cceee-----------------------------cCCCCcccccccc-cccccccccccccCCCCCChHHHHHHHHHHHH
Q 039505          263 AGFLN-----------------------------TKNPVISKSIENG-NSHLRDKSTVDLSFKGEFDIISVGKAVEIAMA  312 (342)
Q Consensus       263 ~~y~a-----------------------------tG~~P~~~~~~~~-~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~  312 (342)
                      +.|+|                             ||+.||....... ....+......+.+ ......+...+.+++..
T Consensus       186 ~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~  264 (289)
T 3og7_A          186 ILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDL-SKVRSNCPKRMKRLMAE  264 (289)
T ss_dssp             CTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCT-TSSCTTSCHHHHHHHHH
T ss_pred             ccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcch-hhccccCCHHHHHHHHH
Confidence            88887                             8888887543221 00111111122221 11223445668999999


Q ss_pred             cccccCCCCCCHHHHHHHHHhccC
Q 039505          313 SVSSKVNRRPLMNQVVMVREQGNG  336 (342)
Q Consensus       313 Cl~~~P~~RPsm~eV~~~L~~i~~  336 (342)
                      ||+.+|++|||+.++++.|+++.+
T Consensus       265 ~l~~~p~~Rps~~ell~~L~~l~~  288 (289)
T 3og7_A          265 CLKKKRDERPSFPRILAEIEELAR  288 (289)
T ss_dssp             HTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             HccCChhhCCCHHHHHHHHHHHhh
Confidence            999999999999999999998865

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.82  E-value=2.3e-21  Score=184.62  Aligned_cols=164  Identities=18%  Similarity=0.239  Sum_probs=106.4

Q ss_pred             cccCcCCCeeEEEEEEC----CC-eEEEEEccCCCCCCCcc-------------------EE-EeeCC---cEEE--E--
Q 039505          165 RVPYKGGFITVYHGQLV----KS-EVAMKMLSPSSSQGHVP-------------------IV-ECHVG---ALIT--I--  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~----~~-~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~---~lv~--m--  212 (342)
                      +.||+|+||.||+|++.    .+ .||||+++........+                   ++ +|..+   ++|+  +  
T Consensus        51 ~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  130 (373)
T 2qol_A           51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMEN  130 (373)
T ss_dssp             EEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred             eEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCCCC
Confidence            89999999999999876    33 89999997653221111                   44 55444   4454  2  


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc---------c
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM---------S  256 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~---------~  256 (342)
                                               +++||+|||+   .+|+||||||+|||++.+  .++.+++.....         .
T Consensus       131 ~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~  207 (373)
T 2qol_A          131 GSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTT  207 (373)
T ss_dssp             CBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC----------------
T ss_pred             CcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEEcCCCCEEECcCccccccccCCccceec
Confidence                                     8999999999   899999999999999988  344444332111         1


Q ss_pred             cccccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHH
Q 039505          257 TTIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEI  309 (342)
Q Consensus       257 ~~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l  309 (342)
                      ....+++.|+|                          | |+.|+.......   +.  ..++.......+..+...+.++
T Consensus       208 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~---~~--~~i~~~~~~~~~~~~~~~l~~l  282 (373)
T 2qol_A          208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD---VI--KAVDEGYRLPPPMDCPAALYQL  282 (373)
T ss_dssp             ------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH---HH--HHHHTTEECCCCTTCBHHHHHH
T ss_pred             cCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH---HH--HHHHcCCCCCCCccccHHHHHH
Confidence            11234667887                          5 999987654322   11  1111111112233445668899


Q ss_pred             HHHcccccCCCCCCHHHHHHHHHhccC
Q 039505          310 AMASVSSKVNRRPLMNQVVMVREQGNG  336 (342)
Q Consensus       310 ~~~Cl~~~P~~RPsm~eV~~~L~~i~~  336 (342)
                      +.+||+.+|++||++.+|++.|+.+..
T Consensus       283 i~~cl~~dp~~RPs~~~i~~~L~~~~~  309 (373)
T 2qol_A          283 MLDCWQKDRNNRPKFEQIVSILDKLIR  309 (373)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHhCcChhhCcCHHHHHHHHHHHHh
Confidence            999999999999999999999988754

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.82  E-value=7.5e-21  Score=178.56  Aligned_cols=159  Identities=14%  Similarity=0.188  Sum_probs=107.2

Q ss_pred             cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCCc------c----------------EE-EeeCC---cEEE-E----
Q 039505          165 RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGHV------P----------------IV-ECHVG---ALIT-I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~~------~----------------Lv-~c~~~---~lv~-m----  212 (342)
                      +.||+|+||.||+|...++ .||||++.........      +                ++ ++..+   ++|+ +    
T Consensus        15 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e~~~~~   94 (343)
T 3dbq_A           15 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNID   94 (343)
T ss_dssp             EEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCSEE
T ss_pred             EEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEeCCCCC
Confidence            8999999999999998777 9999998755322110      1                44 55544   4443 1    


Q ss_pred             ----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-CccccCCCCCc--------ccccccc
Q 039505          213 ----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-SRISPVEGGTH--------MSTTIAG  261 (342)
Q Consensus       213 ----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-a~~~~~~~~~~--------~~~~~~G  261 (342)
                                            +++||+|||+   .+|+||||||+|||++++ .++.+++....        ......|
T Consensus        95 L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~---~~iiHrDikp~NIll~~~~~kl~DFG~a~~~~~~~~~~~~~~~~g  171 (343)
T 3dbq_A           95 LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVG  171 (343)
T ss_dssp             HHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEETTEEEECCCSSSCCC------------CC
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEECCcEEEeecccccccCcccccccCCCCcC
Confidence                                  8999999999   999999999999999866 55555543321        1223578


Q ss_pred             Ccceee-------------------------------------cCCCCcccccccccccccccccccccCCCCCChHHHH
Q 039505          262 TAGFLN-------------------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVG  304 (342)
Q Consensus       262 t~~y~a-------------------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~  304 (342)
                      |++|+|                                     ||+.||.......  ... ..++++......+.....
T Consensus       172 t~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~  248 (343)
T 3dbq_A          172 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI--SKL-HAIIDPNHEIEFPDIPEK  248 (343)
T ss_dssp             CCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH--HHH-HHHHCTTSCCCCCCCSCH
T ss_pred             CcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHH--HHH-HHHhcCCcccCCcccCCH
Confidence            988887                                     6777775432211  000 222333333333333345


Q ss_pred             HHHHHHHHcccccCCCCCCHHHHHH
Q 039505          305 KAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       305 ~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      .+.+++..||+.+|++|||+.|+++
T Consensus       249 ~l~~li~~~L~~dp~~Rpt~~e~l~  273 (343)
T 3dbq_A          249 DLQDVLKCCLKRDPKQRISIPELLA  273 (343)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHcCCChhHCCCHHHHHh
Confidence            6889999999999999999999975

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.82  E-value=1.5e-20  Score=175.30  Aligned_cols=177  Identities=19%  Similarity=0.213  Sum_probs=110.6

Q ss_pred             hccC--cccCcCCCeeEEEEEECCCeEEEEEccCCCCCCCcc-----------------EE-Ee----eCC----cEEE-
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGHVP-----------------IV-EC----HVG----ALIT-  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~~vAVK~l~~~~~~~~~~-----------------Lv-~c----~~~----~lv~-  211 (342)
                      ++|.  +.||+|+||+||+|++.+..||||+++.........                 ++ .+    ..+    ++|+ 
T Consensus        13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e   92 (336)
T 3g2f_A           13 DNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVME   92 (336)
T ss_dssp             TSEEEEEEEEECSSEEEEEEEETTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEEC
T ss_pred             HHhheeeecccCCCeEEEEEEECCeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEe
Confidence            3454  899999999999998855599999986432110000                 22 11    111    2333 


Q ss_pred             -E-------------------------ehhhhhhhhccC------CCCeeeCCCCcceEEecCC--CccccCCCCCc---
Q 039505          212 -I-------------------------PKEGLEYLHQGL------KHPIIQRDMKSTNILLNEK--SRISPVEGGTH---  254 (342)
Q Consensus       212 -m-------------------------ia~gL~yLH~~~------~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~---  254 (342)
                       +                         +++||+|||+.+      .++|+||||||+|||++.+  .++.+++....   
T Consensus        93 ~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~  172 (336)
T 3g2f_A           93 YYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTG  172 (336)
T ss_dssp             CCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred             cCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccceeeccc
Confidence             1                         889999999921      1199999999999999988  44444433211   


Q ss_pred             -----------cccccccCcceee---------------------------------cCCCCcccccccc-cccccc---
Q 039505          255 -----------MSTTIAGTAGFLN---------------------------------TKNPVISKSIENG-NSHLRD---  286 (342)
Q Consensus       255 -----------~~~~~~Gt~~y~a---------------------------------tG~~P~~~~~~~~-~~~l~~---  286 (342)
                                 ......||+.|+|                                 ||+.|+....... ......   
T Consensus       173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~  252 (336)
T 3g2f_A          173 NRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEV  252 (336)
T ss_dssp             SSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHH
T ss_pred             ccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhccc
Confidence                       1113468999988                                 6666554332111 000000   


Q ss_pred             --------------cccccccCCCC--CChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccCC
Q 039505          287 --------------KSTVDLSFKGE--FDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNGS  337 (342)
Q Consensus       287 --------------~~~~d~~l~~~--~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~~  337 (342)
                                    .....+.+...  ........+.+++.+||+.+|++|||+.|+++.|+++...
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~  319 (336)
T 3g2f_A          253 GNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMI  319 (336)
T ss_dssp             CSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             CCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHH
Confidence                          11111222211  1234566799999999999999999999999999987543

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.82  E-value=1.7e-20  Score=176.58  Aligned_cols=167  Identities=19%  Similarity=0.230  Sum_probs=112.2

Q ss_pred             hhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc---------------EE-EeeCC---cEEE--E--
Q 039505          160 TNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP---------------IV-ECHVG---ALIT--I--  212 (342)
Q Consensus       160 t~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~---------------Lv-~c~~~---~lv~--m--  212 (342)
                      .++|.  +.||+|+||+||+|....+  .||||+++........+               +. ++..+   ++|+  +  
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~g  100 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKG  100 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCC
Confidence            45566  8999999999999998755  89999998765443333               33 44433   3333  1  


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC------CccccCCCCCc------cc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK------SRISPVEGGTH------MS  256 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~------a~~~~~~~~~~------~~  256 (342)
                                              +++||+|||+   .+|+||||||+|||+.++      .++.+++....      ..
T Consensus       101 g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~---~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~  177 (342)
T 2qr7_A          101 GELLDKILRQKFFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLL  177 (342)
T ss_dssp             CBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCCB
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCce
Confidence                                    8999999999   999999999999998543      34555443321      12


Q ss_pred             cccccCcceee--------------------------cCCCCcccccccccccccc-cccccccCCCCCChHHHHHHHHH
Q 039505          257 TTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRD-KSTVDLSFKGEFDIISVGKAVEI  309 (342)
Q Consensus       257 ~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~l~~~~~~~~~~~l~~l  309 (342)
                      ...+||+.|+|                          ||+.||..........+.. ...-...+...........+.++
T Consensus       178 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l  257 (342)
T 2qr7_A          178 MTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDL  257 (342)
T ss_dssp             CCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHHHHHH
T ss_pred             eccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccCCHHHHHH
Confidence            34678999998                          9999997643221111111 00001111122223344568899


Q ss_pred             HHHcccccCCCCCCHHHHHH
Q 039505          310 AMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       310 ~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      +.+||+.||++|||+.|+++
T Consensus       258 i~~~L~~dP~~R~t~~~il~  277 (342)
T 2qr7_A          258 VSKMLHVDPHQRLTAALVLR  277 (342)
T ss_dssp             HHHHTCSSTTTSCCHHHHTT
T ss_pred             HHHHCCCChhHCcCHHHHhc
Confidence            99999999999999999874

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.82  E-value=8.3e-21  Score=177.10  Aligned_cols=170  Identities=15%  Similarity=0.119  Sum_probs=111.2

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc--c---------------EE-EeeCC---cEEE--E-
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV--P---------------IV-ECHVG---ALIT--I-  212 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~--~---------------Lv-~c~~~---~lv~--m-  212 (342)
                      ++|.  +.||+|+||+||+|....+  .||||++........-  +               ++ ++..+   ++|+  + 
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~   88 (330)
T 2izr_A            9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELLG   88 (330)
T ss_dssp             TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECCC
T ss_pred             CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeCC
Confidence            4555  8999999999999998544  9999998765432211  1               33 33333   3333  1 


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC-------ccccCCCCCcc-----
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS-------RISPVEGGTHM-----  255 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a-------~~~~~~~~~~~-----  255 (342)
                                               +++||+|||+   .+|+||||||+|||++.+.       ++.+++.....     
T Consensus        89 ~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~  165 (330)
T 2izr_A           89 PSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHS---KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPET  165 (330)
T ss_dssp             CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTT
T ss_pred             CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCC
Confidence                                     8999999999   8999999999999999762       34444332110     


Q ss_pred             --------ccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCC---C
Q 039505          256 --------STTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGE---F  298 (342)
Q Consensus       256 --------~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~---~  298 (342)
                              .....||+.|+|                          ||+.||............. .+.+......   .
T Consensus       166 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~-~i~~~~~~~~~~~~  244 (330)
T 2izr_A          166 KKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQ-KIGDTKRATPIEVL  244 (330)
T ss_dssp             CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHH-HHHHHHHHSCHHHH
T ss_pred             CccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHH-HHHhhhccCCHHHH
Confidence                    134679999998                          8999987653222001110 0000000000   0


Q ss_pred             ChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhcc
Q 039505          299 DIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       299 ~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                      ....+ .+.+++..||+.+|.+||++.+|.+.|+++.
T Consensus       245 ~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~  280 (330)
T 2izr_A          245 CENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLF  280 (330)
T ss_dssp             TTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred             hccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHH
Confidence            01122 6889999999999999999999999998764

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.82  E-value=1.1e-20  Score=173.59  Aligned_cols=168  Identities=14%  Similarity=0.137  Sum_probs=110.3

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc---------------------EE-EeeCC---cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP---------------------IV-ECHVG---ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~---------------------Lv-~c~~~---~lv~--m---  212 (342)
                      +.||+|+||.||+|+....  .||||++..........                     ++ ++..+   ++|+  +   
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~   96 (294)
T 4eqm_A           17 DKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGP   96 (294)
T ss_dssp             EEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred             EEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCCC
Confidence            8999999999999998754  99999986544332211                     44 44444   3343  1   


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-------cccccc
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-------MSTTIA  260 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-------~~~~~~  260 (342)
                                             +++||+|||+   .+|+||||||+|||++.+  .++.+++....       ......
T Consensus        97 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~  173 (294)
T 4eqm_A           97 TLSEYIESHGPLSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVL  173 (294)
T ss_dssp             BHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCSSSTTC------------
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEEeCCCccccccccccccCccc
Confidence                                   8899999999   999999999999999988  44444433221       112356


Q ss_pred             cCcceee--------------------------cCCCCcccccccccccccc-cccccccCCCCCChHHHHHHHHHHHHc
Q 039505          261 GTAGFLN--------------------------TKNPVISKSIENGNSHLRD-KSTVDLSFKGEFDIISVGKAVEIAMAS  313 (342)
Q Consensus       261 Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~l~~~~~~~~~~~l~~l~~~C  313 (342)
                      ||+.|+|                          ||+.||.......  .... ..-..+..........+..+.+++.+|
T Consensus       174 gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  251 (294)
T 4eqm_A          174 GTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVS--IAIKHIQDSVPNVTTDVRKDIPQSLSNVILRA  251 (294)
T ss_dssp             -CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHH--HHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHH
T ss_pred             cCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHhhccCCCcchhcccCCCHHHHHHHHHH
Confidence            9999998                          8999987654221  0000 000000110111223345688999999


Q ss_pred             ccccCCCCC-CHHHHHHHHHhccCC
Q 039505          314 VSSKVNRRP-LMNQVVMVREQGNGS  337 (342)
Q Consensus       314 l~~~P~~RP-sm~eV~~~L~~i~~~  337 (342)
                      ++.+|++|| ++.++.+.|+.+...
T Consensus       252 l~~dp~~R~~~~~~l~~~l~~~~~~  276 (294)
T 4eqm_A          252 TEKDKANRYKTIQEMKDDLSSVLHE  276 (294)
T ss_dssp             SCSSGGGSCSSHHHHHHHHHTSSSS
T ss_pred             hcCCHhHccccHHHHHHHHHHHHhh
Confidence            999999998 899999999987543

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.82  E-value=3.6e-20  Score=169.34  Aligned_cols=173  Identities=16%  Similarity=0.192  Sum_probs=112.5

Q ss_pred             hhccC--cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCCCc--c--------------EE-Ee-eCC---cEEE--E
Q 039505          160 TNNFE--RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQGHV--P--------------IV-EC-HVG---ALIT--I  212 (342)
Q Consensus       160 t~~f~--~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~~~--~--------------Lv-~c-~~~---~lv~--m  212 (342)
                      .++|.  +.||+|+||.||+|+... + .||||++.........  +              .+ +| ..+   ++++  +
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~   87 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL   87 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcchhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec
Confidence            34566  899999999999999854 4 9999998765432211  1              22 22 222   3333  1


Q ss_pred             --------------------------ehhhhhhhhccCCCCeeeCCCCcceEEec---CC--CccccCCCCCc-------
Q 039505          213 --------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLN---EK--SRISPVEGGTH-------  254 (342)
Q Consensus       213 --------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd---~~--a~~~~~~~~~~-------  254 (342)
                                                +++||+|||+   .+|+||||||+|||++   ++  .++.+++....       
T Consensus        88 ~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~  164 (296)
T 3uzp_A           88 GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH  164 (296)
T ss_dssp             CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred             CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccc
Confidence                                      8999999999   9999999999999995   44  34444433211       


Q ss_pred             ------cccccccCcceee--------------------------cCCCCcccccccccccccc---cccccccCCCCCC
Q 039505          255 ------MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRD---KSTVDLSFKGEFD  299 (342)
Q Consensus       255 ------~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~---~~~~d~~l~~~~~  299 (342)
                            ......||+.|+|                          ||+.||.............   ........ ....
T Consensus       165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  243 (296)
T 3uzp_A          165 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI-EVLC  243 (296)
T ss_dssp             CBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH-HHHT
T ss_pred             cccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch-HHHH
Confidence                  1133578999998                          8999987643221101111   00000000 0001


Q ss_pred             hHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccC
Q 039505          300 IISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNG  336 (342)
Q Consensus       300 ~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~  336 (342)
                      ......+.+++.+||+.+|++|||+.+|++.|+.+..
T Consensus       244 ~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~  280 (296)
T 3uzp_A          244 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH  280 (296)
T ss_dssp             TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHH
T ss_pred             hhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHH
Confidence            1223458899999999999999999999999998753

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.82  E-value=2.3e-20  Score=172.94  Aligned_cols=171  Identities=16%  Similarity=0.189  Sum_probs=108.4

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCCc------c--------------EE-EeeCC---cEEE--
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGHV------P--------------IV-ECHVG---ALIT--  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~~------~--------------Lv-~c~~~---~lv~--  211 (342)
                      ++|.  +.||+|+||+||+|+..++ .||||++.........      +              ++ ++...   ++|+  
T Consensus        21 ~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  100 (311)
T 3niz_A           21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEF  100 (311)
T ss_dssp             CEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEEC
T ss_pred             hhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcC
Confidence            3444  8999999999999999877 9999999765432211      1              44 44444   4444  


Q ss_pred             E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------ccc
Q 039505          212 I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MST  257 (342)
Q Consensus       212 m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~  257 (342)
                      +                          +++||+|||+   .+|+||||||+|||++.+  .++.+++....      ...
T Consensus       101 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~  177 (311)
T 3niz_A          101 MEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYT  177 (311)
T ss_dssp             CSEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC---
T ss_pred             CCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCchHhEEECCCCCEEEccCcCceecCCCccccc
Confidence            2                          8899999999   999999999999999988  44444443221      123


Q ss_pred             ccccCcceee---------------------------cCCCCcccccccc-cccccc-cccccc---------------c
Q 039505          258 TIAGTAGFLN---------------------------TKNPVISKSIENG-NSHLRD-KSTVDL---------------S  293 (342)
Q Consensus       258 ~~~Gt~~y~a---------------------------tG~~P~~~~~~~~-~~~l~~-~~~~d~---------------~  293 (342)
                      ...||+.|+|                           ||+.||....... ...+.. .....+               .
T Consensus       178 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  257 (311)
T 3niz_A          178 HEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRT  257 (311)
T ss_dssp             CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCC
T ss_pred             CCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcc
Confidence            3568888988                           8998887644322 000000 000000               0


Q ss_pred             C--CCCC-----ChHHHHHHHHHHHHcccccCCCCCCHHHHHH--HHHhc
Q 039505          294 F--KGEF-----DIISVGKAVEIAMASVSSKVNRRPLMNQVVM--VREQG  334 (342)
Q Consensus       294 l--~~~~-----~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~--~L~~i  334 (342)
                      .  ....     ......++.+++.+||+.||++|||+.|+++  .++++
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  307 (311)
T 3niz_A          258 FQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL  307 (311)
T ss_dssp             CCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTS
T ss_pred             cccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccC
Confidence            0  0000     1112346789999999999999999999986  34443

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.82  E-value=1.5e-20  Score=175.88  Aligned_cols=160  Identities=17%  Similarity=0.244  Sum_probs=109.7

Q ss_pred             hccC--cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCCC------cc--------------EE-EeeCC---cEEE-
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQGH------VP--------------IV-ECHVG---ALIT-  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~~------~~--------------Lv-~c~~~---~lv~-  211 (342)
                      ++|.  +.||+|+||.||+|++.. + .||||++........      ++              ++ ++...   ++|+ 
T Consensus        15 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e   94 (328)
T 3fe3_A           15 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIME   94 (328)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             CCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEE
Confidence            4555  899999999999999854 4 999999875432211      01              44 44443   4444 


Q ss_pred             -E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-----ccc
Q 039505          212 -I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-----MST  257 (342)
Q Consensus       212 -m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-----~~~  257 (342)
                       +                          +++||+|||+   .+|+||||||+|||++.+  .++.+++....     ...
T Consensus        95 ~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  171 (328)
T 3fe3_A           95 YASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLD  171 (328)
T ss_dssp             CCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGGG
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCccc
Confidence             2                          8999999999   999999999999999988  45555443321     223


Q ss_pred             ccccCcceee---------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHH
Q 039505          258 TIAGTAGFLN---------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIA  310 (342)
Q Consensus       258 ~~~Gt~~y~a---------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~  310 (342)
                      ..+||++|+|                           ||+.||.......   +. ..+.....  ..+......+.+++
T Consensus       172 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~-~~i~~~~~--~~p~~~s~~~~~li  245 (328)
T 3fe3_A          172 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE---LR-ERVLRGKY--RIPFYMSTDCENLL  245 (328)
T ss_dssp             TTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HH-HHHHHCCC--CCCTTSCHHHHHHH
T ss_pred             cccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHH---HH-HHHHhCCC--CCCCCCCHHHHHHH
Confidence            4679999998                           8899987653221   00 11111111  11222344578899


Q ss_pred             HHcccccCCCCCCHHHHHH
Q 039505          311 MASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       311 ~~Cl~~~P~~RPsm~eV~~  329 (342)
                      .+||+.||++|||+.|+++
T Consensus       246 ~~~L~~dP~~R~t~~eil~  264 (328)
T 3fe3_A          246 KRFLVLNPIKRGTLEQIMK  264 (328)
T ss_dssp             HHHCCSSTTTSCCHHHHTT
T ss_pred             HHHCCCChhHCcCHHHHhc
Confidence            9999999999999999975

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.82  E-value=2.8e-21  Score=177.15  Aligned_cols=171  Identities=18%  Similarity=0.115  Sum_probs=110.2

Q ss_pred             cccCcCCCeeEEEEEEC-----CC-eEEEEEccCCCCCCCc----c--------------EE-EeeCC-----cEEE--E
Q 039505          165 RVPYKGGFITVYHGQLV-----KS-EVAMKMLSPSSSQGHV----P--------------IV-ECHVG-----ALIT--I  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~-----~~-~vAVK~l~~~~~~~~~----~--------------Lv-~c~~~-----~lv~--m  212 (342)
                      +.||+|+||+||+|++.     ++ .||||++........+    +              ++ +|...     ++|+  +
T Consensus        16 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~   95 (295)
T 3ugc_A           16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL   95 (295)
T ss_dssp             EEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEECC
T ss_pred             heeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEeC
Confidence            89999999999999852     33 8999999754322111    1              33 33221     3444  1


Q ss_pred             ---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc--------
Q 039505          213 ---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM--------  255 (342)
Q Consensus       213 ---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~--------  255 (342)
                                                 +++||+|||+   .+|+||||||+|||++.+  .++.+++.....        
T Consensus        96 ~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  172 (295)
T 3ugc_A           96 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFK  172 (295)
T ss_dssp             TTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCSCC----------
T ss_pred             CCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHhhEEEcCCCeEEEccCcccccccCCcceee
Confidence                                       8999999999   999999999999999988  444444332211        


Q ss_pred             -ccccccCcceee--------------------------cCCCCcccccccccc--------cccc---cccccccCCCC
Q 039505          256 -STTIAGTAGFLN--------------------------TKNPVISKSIENGNS--------HLRD---KSTVDLSFKGE  297 (342)
Q Consensus       256 -~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~--------~l~~---~~~~d~~l~~~  297 (342)
                       .....|+..|+|                          ||..|+.........        ....   .+.+.......
T Consensus       173 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (295)
T 3ugc_A          173 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP  252 (295)
T ss_dssp             ---CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCC
T ss_pred             eccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCcCC
Confidence             122346667887                          788776543211000        0000   11111111122


Q ss_pred             CChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccCCC
Q 039505          298 FDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNGSR  338 (342)
Q Consensus       298 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~~~  338 (342)
                      .+..+...+.+++.+||+.+|++|||+.|+++.|+++.+..
T Consensus       253 ~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l  293 (295)
T 3ugc_A          253 RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM  293 (295)
T ss_dssp             CCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred             CCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence            23445567899999999999999999999999999987653

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.82  E-value=1.7e-20  Score=172.70  Aligned_cols=158  Identities=19%  Similarity=0.191  Sum_probs=107.1

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc------------------EE-EeeCC---cEEE--E------
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP------------------IV-ECHVG---ALIT--I------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~------------------Lv-~c~~~---~lv~--m------  212 (342)
                      +.||+|+||+||+|....+  .||||++..........                  ++ ++..+   ++|+  +      
T Consensus        26 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~  105 (297)
T 3fxz_A           26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT  105 (297)
T ss_dssp             EEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHH
T ss_pred             eeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCCHH
Confidence            8999999999999997544  99999987554332211                  33 33333   3443  1      


Q ss_pred             -------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------cccccccCcce
Q 039505          213 -------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIAGTAGF  265 (342)
Q Consensus       213 -------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~Gt~~y  265 (342)
                                         +++||+|||+   .+|+||||||+|||++.+  .++.+++....      ......||+.|
T Consensus       106 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y  182 (297)
T 3fxz_A          106 DVVTETCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYW  182 (297)
T ss_dssp             HHHHHSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCGGG
T ss_pred             HHHhhcCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccCCccCCcCc
Confidence                               8899999999   999999999999999988  44444433211      12346799999


Q ss_pred             ee--------------------------cCCCCcccccccccccccc-cccccccCCCCCChHHHHHHHHHHHHcccccC
Q 039505          266 LN--------------------------TKNPVISKSIENGNSHLRD-KSTVDLSFKGEFDIISVGKAVEIAMASVSSKV  318 (342)
Q Consensus       266 ~a--------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P  318 (342)
                      +|                          ||+.||.......  .+.. .....+.  ...+......+.+++.+||+.+|
T Consensus       183 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dp  258 (297)
T 3fxz_A          183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR--ALYLIATNGTPE--LQNPEKLSAIFRDFLNRCLEMDV  258 (297)
T ss_dssp             CCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHHCSCC--CSCGGGSCHHHHHHHHHHSCSST
T ss_pred             cChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhCCCCC--CCCccccCHHHHHHHHHHccCCh
Confidence            98                          8999987543221  0000 0000111  11223344568899999999999


Q ss_pred             CCCCCHHHHHH
Q 039505          319 NRRPLMNQVVM  329 (342)
Q Consensus       319 ~~RPsm~eV~~  329 (342)
                      ++|||+.|+++
T Consensus       259 ~~Rps~~ell~  269 (297)
T 3fxz_A          259 EKRGSAKELLQ  269 (297)
T ss_dssp             TTSCCHHHHTT
T ss_pred             hHCcCHHHHhh
Confidence            99999999985

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.82  E-value=1.7e-20  Score=170.46  Aligned_cols=167  Identities=16%  Similarity=0.155  Sum_probs=110.9

Q ss_pred             cccCcCCCeeEEEEEECCCeEEEEEccCCCCCCC--cc--------------EE-EeeCC----cEEE--E---------
Q 039505          165 RVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGH--VP--------------IV-ECHVG----ALIT--I---------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~~vAVK~l~~~~~~~~--~~--------------Lv-~c~~~----~lv~--m---------  212 (342)
                      +.||+|+||+||+|.+.+..||||+++.......  .+              ++ ++...    ++++  +         
T Consensus        27 ~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l  106 (278)
T 1byg_A           27 QTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL  106 (278)
T ss_dssp             EEEEECSSCEEEEEEETTEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHH
T ss_pred             eEEecCCCceEEEEEEcCCEEEEEEecchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCHHHHH
Confidence            8999999999999998755999999975432110  01              33 43322    4444  1         


Q ss_pred             -------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc---cccccccCcceee-
Q 039505          213 -------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH---MSTTIAGTAGFLN-  267 (342)
Q Consensus       213 -------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~---~~~~~~Gt~~y~a-  267 (342)
                                         +++||+|||+   .+|+||||||+||+++.+.  ++.+++....   ......+++.|+| 
T Consensus       107 ~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~y~aP  183 (278)
T 1byg_A          107 RSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAP  183 (278)
T ss_dssp             HHHHHHHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC------------CCTTTSCH
T ss_pred             HhcccccCCHHHHHHHHHHHHHHHHHHHh---CCccccCCCcceEEEeCCCcEEEeeccccccccccccCCCccccccCH
Confidence                               8899999999   9999999999999999884  4444433221   1122457777887 


Q ss_pred             -------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCC
Q 039505          268 -------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRR  321 (342)
Q Consensus       268 -------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~R  321 (342)
                                               | |+.|+.......   +..  .+........+......+.+++.+||+.+|++|
T Consensus       184 E~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R  258 (278)
T 1byg_A          184 EALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVP--RVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMR  258 (278)
T ss_dssp             HHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG---HHH--HHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             HHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH---HHH--HHhcCCCCCCcccCCHHHHHHHHHHhcCChhhC
Confidence                                     6 999987643221   111  011111112233344568899999999999999


Q ss_pred             CCHHHHHHHHHhccCCCC
Q 039505          322 PLMNQVVMVREQGNGSRI  339 (342)
Q Consensus       322 Psm~eV~~~L~~i~~~~~  339 (342)
                      ||+.|+++.|++++....
T Consensus       259 ps~~~l~~~L~~i~~~~~  276 (278)
T 1byg_A          259 PSFLQLREQLEHIKTHEL  276 (278)
T ss_dssp             CCHHHHHHHHHHHHHHCC
T ss_pred             CCHHHHHHHHHHHHhhhc
Confidence            999999999999876544

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.82  E-value=1.2e-20  Score=179.84  Aligned_cols=116  Identities=16%  Similarity=0.146  Sum_probs=80.6

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc--------cccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH--------MSTTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~--------~~~~~~Gt~~y~a---------------  267 (342)
                      +++||+|||+   .+|+||||||+|||++++  .++.+++....        ......||+.|+|               
T Consensus       200 i~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di  276 (382)
T 3tt0_A          200 VARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV  276 (382)
T ss_dssp             HHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHH
T ss_pred             HHHHHHHHHh---CCEecCCCCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHH
Confidence            7899999999   899999999999999988  44444443221        1223456788888               


Q ss_pred             -----------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhcc
Q 039505          268 -----------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       268 -----------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                                 | |+.|+.......   +..  .+........+......+.+++.+||+.+|++|||+.||++.|+++.
T Consensus       277 wslG~il~ellt~g~~p~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~  351 (382)
T 3tt0_A          277 WSFGVLLWEIFTLGGSPYPGVPVEE---LFK--LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV  351 (382)
T ss_dssp             HHHHHHHHHHHTTSCCSSTTCCHHH---HHH--HHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCCCCCHHH---HHH--HHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence                       6 888887643221   111  11111111222334456889999999999999999999999999875


Q ss_pred             C
Q 039505          336 G  336 (342)
Q Consensus       336 ~  336 (342)
                      .
T Consensus       352 ~  352 (382)
T 3tt0_A          352 A  352 (382)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.82  E-value=2.4e-20  Score=173.87  Aligned_cols=163  Identities=15%  Similarity=0.137  Sum_probs=108.4

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc-------------------EE-EeeCC---cEEE--
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP-------------------IV-ECHVG---ALIT--  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~---~lv~--  211 (342)
                      ++|.  +.||+|+||+||+|....+  .||||++.........+                   ++ +|..+   ++|+  
T Consensus         7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   86 (323)
T 3tki_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   86 (323)
T ss_dssp             TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence            4555  8999999999999998744  99999987554322111                   44 55444   3443  


Q ss_pred             E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc--------c
Q 039505          212 I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH--------M  255 (342)
Q Consensus       212 m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~--------~  255 (342)
                      +                          +++||+|||+   .+|+||||||+|||++.+  .++.+++....        .
T Consensus        87 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~  163 (323)
T 3tki_A           87 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL  163 (323)
T ss_dssp             CTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred             CCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccccchHHEEEeCCCCEEEEEeeccceeccCCcccc
Confidence            1                          8999999999   999999999999999988  44444433321        1


Q ss_pred             ccccccCcceee---------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHH
Q 039505          256 STTIAGTAGFLN---------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVE  308 (342)
Q Consensus       256 ~~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~  308 (342)
                      .....||+.|+|                           ||+.||.......  .... ..................+.+
T Consensus       164 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~  240 (323)
T 3tki_A          164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC--QEYS-DWKEKKTYLNPWKKIDSAPLA  240 (323)
T ss_dssp             BCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTS--HHHH-HHHTTCTTSTTGGGSCHHHHH
T ss_pred             cCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHH--HHHH-HHhcccccCCccccCCHHHHH
Confidence            124679999998                           8999987654322  0000 011111111111233455788


Q ss_pred             HHHHcccccCCCCCCHHHHHH
Q 039505          309 IAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       309 l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ++.+||+.+|++|||+.|+++
T Consensus       241 li~~~L~~dP~~R~t~~eil~  261 (323)
T 3tki_A          241 LLHKILVENPSARITIPDIKK  261 (323)
T ss_dssp             HHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHccCChhhCcCHHHHhh
Confidence            999999999999999999975

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.81  E-value=1.6e-20  Score=179.77  Aligned_cols=159  Identities=14%  Similarity=0.184  Sum_probs=107.1

Q ss_pred             cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCCc------c----------------EE-EeeCC---cEEE-E----
Q 039505          165 RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGHV------P----------------IV-ECHVG---ALIT-I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~~------~----------------Lv-~c~~~---~lv~-m----  212 (342)
                      +.||+|+||+||+|....+ .||||++.........      +                ++ ++...   ++|+ +    
T Consensus        62 ~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E~~~~~  141 (390)
T 2zmd_A           62 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNID  141 (390)
T ss_dssp             EEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCSEE
T ss_pred             EEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEecCCCC
Confidence            8999999999999998777 9999999765322110      0                33 45444   3333 1    


Q ss_pred             ----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-CccccCCCCCc--------ccccccc
Q 039505          213 ----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-SRISPVEGGTH--------MSTTIAG  261 (342)
Q Consensus       213 ----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-a~~~~~~~~~~--------~~~~~~G  261 (342)
                                            +++||+|||+   .+|+||||||+|||+++. .++.+++....        .....+|
T Consensus       142 L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~~~~~kl~DFG~a~~~~~~~~~~~~~~~~g  218 (390)
T 2zmd_A          142 LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVG  218 (390)
T ss_dssp             HHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCCGGGEEESSSCEEECCCSSSCCC---------CCSCC
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEEECCeEEEEecCccccccCCCccccCCCCCc
Confidence                                  8999999999   899999999999999765 55555543321        1233579


Q ss_pred             Ccceee-------------------------------------cCCCCcccccccccccccccccccccCCCCCChHHHH
Q 039505          262 TAGFLN-------------------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVG  304 (342)
Q Consensus       262 t~~y~a-------------------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~  304 (342)
                      |+.|+|                                     ||+.||.......  ... ..++++......+.....
T Consensus       219 t~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~  295 (390)
T 2zmd_A          219 AVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI--SKL-HAIIDPNHEIEFPDIPEK  295 (390)
T ss_dssp             CGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH--HHH-HHHHCTTSCCCCCCCSCH
T ss_pred             CCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHH--HHH-HHHhCccccCCCCccchH
Confidence            999987                                     6777775432211  000 122333222222222345


Q ss_pred             HHHHHHHHcccccCCCCCCHHHHHH
Q 039505          305 KAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       305 ~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      .+.+++.+||+.+|++|||+.|+++
T Consensus       296 ~~~~li~~~L~~dP~~Rps~~ell~  320 (390)
T 2zmd_A          296 DLQDVLKCCLKRDPKQRISIPELLA  320 (390)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHcccChhhCCCHHHHhh
Confidence            6889999999999999999999984

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.81  E-value=1.8e-20  Score=177.50  Aligned_cols=160  Identities=16%  Similarity=0.145  Sum_probs=101.5

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc---c--------------EE-EeeCC---cEEE--E-------
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV---P--------------IV-ECHVG---ALIT--I-------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~---~--------------Lv-~c~~~---~lv~--m-------  212 (342)
                      +.||+|+||+||+++...+  .||||++.........   +              ++ ++...   ++|+  +       
T Consensus        26 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~  105 (361)
T 3uc3_A           26 KDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYE  105 (361)
T ss_dssp             EEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHH
T ss_pred             EEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCHHH
Confidence            8999999999999999754  9999999765432211   1              34 44433   3333  1       


Q ss_pred             -------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC----CccccCCCCCc-----cccccccCcc
Q 039505          213 -------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK----SRISPVEGGTH-----MSTTIAGTAG  264 (342)
Q Consensus       213 -------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~----a~~~~~~~~~~-----~~~~~~Gt~~  264 (342)
                                         +++||+|||+   .+|+||||||+|||++.+    .++.+++....     ......||+.
T Consensus       106 ~l~~~~~~~~~~~~~i~~ql~~~L~~LH~---~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~  182 (361)
T 3uc3_A          106 RICNAGRFSEDEARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPA  182 (361)
T ss_dssp             HHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTCCSCCCCGGGEEECSSSSCCEEECCCCCC---------------CT
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCCCCcCCCC
Confidence                               8999999999   999999999999999876    34444443221     1233679999


Q ss_pred             eee---------------------------cCCCCcccccccccccccc--cccccccCCCCCChHHHHHHHHHHHHccc
Q 039505          265 FLN---------------------------TKNPVISKSIENGNSHLRD--KSTVDLSFKGEFDIISVGKAVEIAMASVS  315 (342)
Q Consensus       265 y~a---------------------------tG~~P~~~~~~~~~~~l~~--~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~  315 (342)
                      |+|                           ||+.||.......  .+..  ..+................+.+++.+||+
T Consensus       183 y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~  260 (361)
T 3uc3_A          183 YIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR--DYRKTIQRILSVKYSIPDDIRISPECCHLISRIFV  260 (361)
T ss_dssp             TSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC--CHHHHHHHHHTTCCCCCTTSCCCHHHHHHHHHHSC
T ss_pred             cCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH--HHHHHHHHHhcCCCCCCCcCCCCHHHHHHHHHHcc
Confidence            998                           8999987654322  1111  11111111111111233558899999999


Q ss_pred             ccCCCCCCHHHHHH
Q 039505          316 SKVNRRPLMNQVVM  329 (342)
Q Consensus       316 ~~P~~RPsm~eV~~  329 (342)
                      .+|++|||+.|+++
T Consensus       261 ~dP~~Rps~~ell~  274 (361)
T 3uc3_A          261 ADPATRISIPEIKT  274 (361)
T ss_dssp             SCTTTSCCHHHHHT
T ss_pred             CChhHCcCHHHHHh
Confidence            99999999999985

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.81  E-value=2.4e-20  Score=185.71  Aligned_cols=165  Identities=15%  Similarity=0.189  Sum_probs=116.3

Q ss_pred             cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCC---cc--------------EE-EeeCC--cEEE--E---------
Q 039505          165 RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGH---VP--------------IV-ECHVG--ALIT--I---------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~---~~--------------Lv-~c~~~--~lv~--m---------  212 (342)
                      +.||+|+||.||+|.+.++ .||||+++.......   ++              ++ +|.++  ++|+  +         
T Consensus       273 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~lv~e~~~~gsL~~~l  352 (535)
T 2h8h_A          273 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFL  352 (535)
T ss_dssp             EEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCTTEEHHHHH
T ss_pred             eecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEeeccceEeeehhcCCcHHHHH
Confidence            7899999999999999887 999999986542211   11              44 55444  4554  2         


Q ss_pred             -------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc-------ccccccCcc
Q 039505          213 -------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM-------STTIAGTAG  264 (342)
Q Consensus       213 -------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~-------~~~~~Gt~~  264 (342)
                                         +++||+|||+   .+|+||||||+|||++++  .++.+++.....       .....++..
T Consensus       353 ~~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~  429 (535)
T 2h8h_A          353 KGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK  429 (535)
T ss_dssp             SHHHHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCSTTSCGG
T ss_pred             hhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCCcCccc
Confidence                               8999999999   999999999999999987  455555443221       122456778


Q ss_pred             eee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHccccc
Q 039505          265 FLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSK  317 (342)
Q Consensus       265 y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~  317 (342)
                      |+|                          | |+.|+.......   +..  .+........+..+...+.+++.+||+.+
T Consensus       430 y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~---~~~--~i~~~~~~~~~~~~~~~l~~li~~cl~~d  504 (535)
T 2h8h_A          430 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---VLD--QVERGYRMPCPPECPESLHDLMCQCWRKE  504 (535)
T ss_dssp             GSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH---HHH--HHHTTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             ccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHH--HHHcCCCCCCCCCCCHHHHHHHHHHcCCC
Confidence            888                          6 899987653221   110  11111111223345566889999999999


Q ss_pred             CCCCCCHHHHHHHHHhccCC
Q 039505          318 VNRRPLMNQVVMVREQGNGS  337 (342)
Q Consensus       318 P~~RPsm~eV~~~L~~i~~~  337 (342)
                      |++|||+.+|++.|+.+-.+
T Consensus       505 P~~RPt~~~l~~~L~~~~~~  524 (535)
T 2h8h_A          505 PEERPTFEYLQAFLEDYFTS  524 (535)
T ss_dssp             GGGSCCHHHHHHHHHTSSCC
T ss_pred             hhHCcCHHHHHHHHHHHhhc
Confidence            99999999999999998654

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.81  E-value=1.1e-20  Score=185.83  Aligned_cols=171  Identities=15%  Similarity=0.169  Sum_probs=112.4

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc-----------------EE-EeeCC---cEEE--E-
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP-----------------IV-ECHVG---ALIT--I-  212 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~-----------------Lv-~c~~~---~lv~--m-  212 (342)
                      ++|.  ++||+|+||.||+|++..+  .||||+++.........                 +. ++..+   ++|+  + 
T Consensus         7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~g   86 (483)
T 3sv0_A            7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLLG   86 (483)
T ss_dssp             TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECCC
T ss_pred             CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECCC
Confidence            4555  8999999999999998644  99999887654322211                 22 33333   3333  1 


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEec---CC--CccccCCCCCc--------
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLN---EK--SRISPVEGGTH--------  254 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd---~~--a~~~~~~~~~~--------  254 (342)
                                               ++.||+|||+   .+|+||||||+|||++   .+  .++.+++....        
T Consensus        87 ~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~  163 (483)
T 3sv0_A           87 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS---KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQ  163 (483)
T ss_dssp             CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCC
T ss_pred             CCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcccc
Confidence                                     8999999999   9999999999999994   44  44554443211        


Q ss_pred             -----cccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCC---CCCh
Q 039505          255 -----MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKG---EFDI  300 (342)
Q Consensus       255 -----~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~---~~~~  300 (342)
                           ......||+.|+|                          ||+.||...........+. .+....+..   ....
T Consensus       164 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~  242 (483)
T 3sv0_A          164 HIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYE-KISEKKVATSIEALCR  242 (483)
T ss_dssp             BCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHH-HHHHHHHHSCHHHHHT
T ss_pred             ccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHH-HHhhccccccHHHHhc
Confidence                 0114679999998                          8999987654322001110 000000000   0001


Q ss_pred             HHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhcc
Q 039505          301 ISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       301 ~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                      ....++.+++..||+.+|++||++.+|++.|+.+.
T Consensus       243 ~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~  277 (483)
T 3sv0_A          243 GYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLF  277 (483)
T ss_dssp             TSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence            22346889999999999999999999999998873

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.81  E-value=8.1e-20  Score=171.25  Aligned_cols=156  Identities=15%  Similarity=0.210  Sum_probs=107.9

Q ss_pred             hhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc------------c--------------EE-EeeCC-
Q 039505          160 TNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV------------P--------------IV-ECHVG-  207 (342)
Q Consensus       160 t~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~------------~--------------Lv-~c~~~-  207 (342)
                      .++|.  +.||+|+||+||+|+...+  .||||+++........            +              ++ ++... 
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~  102 (335)
T 3dls_A           23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG  102 (335)
T ss_dssp             HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence            34555  8999999999999998655  8999999876422110            1              44 44443 


Q ss_pred             --cEEE--E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc
Q 039505          208 --ALIT--I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH  254 (342)
Q Consensus       208 --~lv~--m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~  254 (342)
                        ++|+  +                           +++||+|||+   .+|+||||||+|||++.+  .++.+++....
T Consensus       103 ~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~  179 (335)
T 3dls_A          103 FFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAY  179 (335)
T ss_dssp             EEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             EEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeEEeccCHHHEEEcCCCcEEEeecccceE
Confidence              3333  1                           8899999999   999999999999999988  44444433221


Q ss_pred             -----cccccccCcceee---------------------------cCCCCcccccccccccccccccccccCCCCCChHH
Q 039505          255 -----MSTTIAGTAGFLN---------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIIS  302 (342)
Q Consensus       255 -----~~~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~  302 (342)
                           ......||+.|+|                           ||+.||.......          .....  .+...
T Consensus       180 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~----------~~~~~--~~~~~  247 (335)
T 3dls_A          180 LERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETV----------EAAIH--PPYLV  247 (335)
T ss_dssp             CCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGT----------TTCCC--CSSCC
T ss_pred             CCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHH----------hhccC--CCccc
Confidence                 1223578999998                           7777776432211          11111  11113


Q ss_pred             HHHHHHHHHHcccccCCCCCCHHHHHHH
Q 039505          303 VGKAVEIAMASVSSKVNRRPLMNQVVMV  330 (342)
Q Consensus       303 ~~~l~~l~~~Cl~~~P~~RPsm~eV~~~  330 (342)
                      ...+.+++..||+.+|++|||+.|+++.
T Consensus       248 ~~~l~~li~~~L~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          248 SKELMSLVSGLLQPVPERRTTLEKLVTD  275 (335)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            3458899999999999999999999864

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.81  E-value=6.1e-20  Score=171.43  Aligned_cols=177  Identities=17%  Similarity=0.204  Sum_probs=115.2

Q ss_pred             HhhccC--cccCcCCCeeEEEEEECCCeEEEEEccCCCCCCC-cc----------------EE-EeeCC-------cEEE
Q 039505          159 VTNNFE--RVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGH-VP----------------IV-ECHVG-------ALIT  211 (342)
Q Consensus       159 at~~f~--~~lG~G~fG~Vykg~~~~~~vAVK~l~~~~~~~~-~~----------------Lv-~c~~~-------~lv~  211 (342)
                      ..++|.  +.||+|+||+||+|++.+..||||+++....... .+                ++ ++...       ++++
T Consensus        40 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~  119 (342)
T 1b6c_B           40 IARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS  119 (342)
T ss_dssp             HHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEE
T ss_pred             ccccEEEEeeecCCCCcEEEEEEEcCccEEEEEeCchhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEE
Confidence            445666  8999999999999998644999999864321100 00                33 33322       2333


Q ss_pred             --E-------------------------ehhhhhhhh--------ccCCCCeeeCCCCcceEEecCC--CccccCCCCCc
Q 039505          212 --I-------------------------PKEGLEYLH--------QGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH  254 (342)
Q Consensus       212 --m-------------------------ia~gL~yLH--------~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~  254 (342)
                        +                         +++||+|||        +   .+|+||||||+|||++.+  .++.+++....
T Consensus       120 e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~  196 (342)
T 1b6c_B          120 DYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK---PAIAHRDLKSKNILVKKNGTCCIADLGLAVR  196 (342)
T ss_dssp             CCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCB---CEEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             eecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhccc---CCeeeCCCCHHHEEECCCCCEEEEECCCcee
Confidence              1                         899999999        6   899999999999999988  44444433211


Q ss_pred             ----------cccccccCcceee--------------------------------cC----------CCCcccccccc--
Q 039505          255 ----------MSTTIAGTAGFLN--------------------------------TK----------NPVISKSIENG--  280 (342)
Q Consensus       255 ----------~~~~~~Gt~~y~a--------------------------------tG----------~~P~~~~~~~~--  280 (342)
                                ......||+.|+|                                ||          +.|+.......  
T Consensus       197 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~  276 (342)
T 1b6c_B          197 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS  276 (342)
T ss_dssp             EETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred             ccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCccc
Confidence                      1123468888887                                66          55654432111  


Q ss_pred             cccccc---cccccccCCCC-CChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccCCC
Q 039505          281 NSHLRD---KSTVDLSFKGE-FDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNGSR  338 (342)
Q Consensus       281 ~~~l~~---~~~~d~~l~~~-~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~~~  338 (342)
                      ...+..   .....+.+... ...++...+.+++.+||+.+|++|||+.||++.|+.+.++.
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~  338 (342)
T 1b6c_B          277 VEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE  338 (342)
T ss_dssp             HHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence            000000   11122222211 12356678999999999999999999999999999987653

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.81  E-value=2.7e-20  Score=167.70  Aligned_cols=166  Identities=17%  Similarity=0.201  Sum_probs=112.6

Q ss_pred             cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCCc---c--------------EE-EeeCC---cEEE--E--------
Q 039505          165 RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGHV---P--------------IV-ECHVG---ALIT--I--------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~~---~--------------Lv-~c~~~---~lv~--m--------  212 (342)
                      +.||+|+||.||+|.+.++ .||||++.........   +              ++ +|...   ++++  +        
T Consensus        14 ~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   93 (267)
T 3t9t_A           14 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDY   93 (267)
T ss_dssp             EEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHH
T ss_pred             eEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHHHH
Confidence            8899999999999999877 9999999765422111   1              34 44443   4444  2        


Q ss_pred             -------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCcc-------ccccccCcc
Q 039505          213 -------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHM-------STTIAGTAG  264 (342)
Q Consensus       213 -------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~~-------~~~~~Gt~~  264 (342)
                                         +++||+|||+   .+|+||||||+||+++.+.  ++.+++.....       .....|++.
T Consensus        94 ~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~  170 (267)
T 3t9t_A           94 LRTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK  170 (267)
T ss_dssp             HHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGG
T ss_pred             HhhCcccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEECCCCCEEEccccccccccccccccccccccccc
Confidence                               8899999999   9999999999999998873  44443322111       122456677


Q ss_pred             eee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHccccc
Q 039505          265 FLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSK  317 (342)
Q Consensus       265 y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~  317 (342)
                      |+|                          | |+.|+.......   +.. .+.. ......+......+.+++.+||+.+
T Consensus       171 y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~-~i~~-~~~~~~~~~~~~~l~~li~~~l~~~  245 (267)
T 3t9t_A          171 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---VVE-DIST-GFRLYKPRLASTHVYQIMNHCWRER  245 (267)
T ss_dssp             GCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH---HHH-HHHT-TCCCCCCTTSCHHHHHHHHHHTCSS
T ss_pred             ccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHH---HHH-HHhc-CCcCCCCccCcHHHHHHHHHHccCC
Confidence            887                          7 888887643221   110 0000 0111112223455889999999999


Q ss_pred             CCCCCCHHHHHHHHHhccCCC
Q 039505          318 VNRRPLMNQVVMVREQGNGSR  338 (342)
Q Consensus       318 P~~RPsm~eV~~~L~~i~~~~  338 (342)
                      |++|||+.++++.|+++.++.
T Consensus       246 p~~Rps~~~ll~~L~~l~~~~  266 (267)
T 3t9t_A          246 PEDRPAFSRLLRQLAEIAESG  266 (267)
T ss_dssp             GGGSCCHHHHHHHHHHHHHC-
T ss_pred             hhhCcCHHHHHHHHHHHHhcc
Confidence            999999999999999987653

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.81  E-value=2.7e-20  Score=169.49  Aligned_cols=164  Identities=13%  Similarity=0.096  Sum_probs=107.4

Q ss_pred             cccCcCCCeeEEEEEECCC-----eEEEEEccCCCCCCCcc-------------------EE-EeeCC--cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVKS-----EVAMKMLSPSSSQGHVP-------------------IV-ECHVG--ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~-----~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~--~lv~--m---  212 (342)
                      +.||+|+||.||+|.+...     .||||++.........+                   ++ ++.++  ++|+  +   
T Consensus        21 ~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~lv~e~~~~~  100 (281)
T 1mp8_A           21 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLG  100 (281)
T ss_dssp             EEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEEEEECCTTE
T ss_pred             eEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEccCccEEEEecCCCC
Confidence            8999999999999998542     69999987643221111                   44 44444  4444  2   


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-------ccccc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-------MSTTI  259 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-------~~~~~  259 (342)
                                              +++||+|||+   .+|+||||||+|||++.+  .++.+++....       .....
T Consensus       101 ~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  177 (281)
T 1mp8_A          101 ELRSFLQVRKYSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG  177 (281)
T ss_dssp             EHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC------------------
T ss_pred             CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHEEECCCCCEEECccccccccCcccccccccC
Confidence                                    8899999999   999999999999999987  44444432211       11224


Q ss_pred             ccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHH
Q 039505          260 AGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMA  312 (342)
Q Consensus       260 ~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~  312 (342)
                      .+|+.|+|                          | |+.||.......   +.. .+... .....+......+.+++.+
T Consensus       178 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~---~~~-~i~~~-~~~~~~~~~~~~l~~li~~  252 (281)
T 1mp8_A          178 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND---VIG-RIENG-ERLPMPPNCPPTLYSLMTK  252 (281)
T ss_dssp             -CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHH-HHHTT-CCCCCCTTCCHHHHHHHHH
T ss_pred             CCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH---HHH-HHHcC-CCCCCCCCCCHHHHHHHHH
Confidence            56778887                          5 888987654322   111 01110 0111223344568899999


Q ss_pred             cccccCCCCCCHHHHHHHHHhccC
Q 039505          313 SVSSKVNRRPLMNQVVMVREQGNG  336 (342)
Q Consensus       313 Cl~~~P~~RPsm~eV~~~L~~i~~  336 (342)
                      ||+.+|++|||+.|+++.|+.+.+
T Consensus       253 ~l~~~p~~Rps~~~l~~~l~~~~~  276 (281)
T 1mp8_A          253 CWAYDPSRRPRFTELKAQLSTILE  276 (281)
T ss_dssp             HTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HccCChhhCcCHHHHHHHHHHHHH
Confidence            999999999999999999998754

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.81  E-value=4e-20  Score=173.94  Aligned_cols=118  Identities=14%  Similarity=0.130  Sum_probs=80.2

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCC--------ccccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGT--------HMSTTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~--------~~~~~~~Gt~~y~a---------------  267 (342)
                      +++||+|||+   .+|+||||||+|||++.+  .++.+++...        .......||+.|+|               
T Consensus       202 l~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di  278 (359)
T 3vhe_A          202 VAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV  278 (359)
T ss_dssp             HHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHH
T ss_pred             HHHHHHHHHH---CCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChhhhcCCCCCchhhh
Confidence            6889999999   999999999999999987  3444433221        12233678889998               


Q ss_pred             -----------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhcc
Q 039505          268 -----------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       268 -----------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                                 | |+.|+.......  .+..  .+........+......+.+++..||+.+|++|||+.|+++.|+++.
T Consensus       279 ~slG~il~ellt~g~~p~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~  354 (359)
T 3vhe_A          279 WSFGVLLWEIFSLGASPYPGVKIDE--EFCR--RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL  354 (359)
T ss_dssp             HHHHHHHHHHTTTSCCSSTTCCCSH--HHHH--HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHhcCCCCCCccchhH--HHHH--HHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence                       7 999987643221  1111  01111111122233455889999999999999999999999999875


Q ss_pred             CC
Q 039505          336 GS  337 (342)
Q Consensus       336 ~~  337 (342)
                      ..
T Consensus       355 ~~  356 (359)
T 3vhe_A          355 QA  356 (359)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.81  E-value=3.5e-20  Score=168.30  Aligned_cols=164  Identities=15%  Similarity=0.143  Sum_probs=111.3

Q ss_pred             cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCCc---c--------------EE-EeeCC--cEEE--E---------
Q 039505          165 RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGHV---P--------------IV-ECHVG--ALIT--I---------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~~---~--------------Lv-~c~~~--~lv~--m---------  212 (342)
                      +.||+|+||.||+|...++ .||||++.........   +              ++ ++..+  ++++  +         
T Consensus        19 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~l   98 (279)
T 1qpc_A           19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL   98 (279)
T ss_dssp             EEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECCTTCBHHHHT
T ss_pred             eeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcCCCcEEEEecCCCCCHHHHH
Confidence            8999999999999999887 9999999765322110   1              33 44433  3444  1         


Q ss_pred             -------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc-------cccccccCcc
Q 039505          213 -------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH-------MSTTIAGTAG  264 (342)
Q Consensus       213 -------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~-------~~~~~~Gt~~  264 (342)
                                         +++||+|||+   .+|+||||||+|||++++.  ++.+++....       ......++..
T Consensus        99 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~  175 (279)
T 1qpc_A           99 KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK  175 (279)
T ss_dssp             TSHHHHTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTT
T ss_pred             hcCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccCCCCccC
Confidence                               8899999999   9999999999999999883  4444333211       1122346667


Q ss_pred             eee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHccccc
Q 039505          265 FLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSK  317 (342)
Q Consensus       265 y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~  317 (342)
                      |+|                          | |+.|+.......   +..  .+........+......+.+++..||+.+
T Consensus       176 y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~l~~li~~~l~~~  250 (279)
T 1qpc_A          176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---VIQ--NLERGYRMVRPDNCPEELYQLMRLCWKER  250 (279)
T ss_dssp             TSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH---HHH--HHHTTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             ccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH---HHH--HHhcccCCCCcccccHHHHHHHHHHhccC
Confidence            887                          7 888987643221   111  00001111122233456889999999999


Q ss_pred             CCCCCCHHHHHHHHHhccC
Q 039505          318 VNRRPLMNQVVMVREQGNG  336 (342)
Q Consensus       318 P~~RPsm~eV~~~L~~i~~  336 (342)
                      |++|||+.++++.|+++..
T Consensus       251 p~~Rps~~~l~~~l~~~~~  269 (279)
T 1qpc_A          251 PEDRPTFDYLRSVLEDFFT  269 (279)
T ss_dssp             GGGSCCHHHHHHHHHHHHH
T ss_pred             hhhCCCHHHHHHHHHHHHH
Confidence            9999999999999988743

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.81  E-value=2.7e-20  Score=188.96  Aligned_cols=163  Identities=16%  Similarity=0.176  Sum_probs=111.1

Q ss_pred             cccCcCCCeeEEEEEECC---C-eEEEEEccCCCCCCCc--c------------------EE-EeeCC--cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVK---S-EVAMKMLSPSSSQGHV--P------------------IV-ECHVG--ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~---~-~vAVK~l~~~~~~~~~--~------------------Lv-~c~~~--~lv~--m---  212 (342)
                      +.||+|+||+||+|.+..   + .||||+++........  +                  ++ +|...  ++|+  +   
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~lv~E~~~~g  454 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELG  454 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTE
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEEEccCCC
Confidence            479999999999997642   2 8999999765322211  1                  55 66655  5555  2   


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCC---------ccccc
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGT---------HMSTT  258 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~---------~~~~~  258 (342)
                                             +++||+|||+   .+|+||||||+|||++++  .++.+++...         .....
T Consensus       455 ~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~---~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~  531 (635)
T 4fl3_A          455 PLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH  531 (635)
T ss_dssp             EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----------
T ss_pred             CHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccC
Confidence                                   8999999999   999999999999999988  4454443211         11122


Q ss_pred             cccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHH
Q 039505          259 IAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAM  311 (342)
Q Consensus       259 ~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~  311 (342)
                      ..||+.|+|                          | |+.||........   .  +.+........+..+...+.+++.
T Consensus       532 ~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~---~--~~i~~~~~~~~p~~~~~~l~~li~  606 (635)
T 4fl3_A          532 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV---T--AMLEKGERMGCPAGCPREMYDLMN  606 (635)
T ss_dssp             ---CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH---H--HHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred             CCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH---H--HHHHcCCCCCCCCCCCHHHHHHHH
Confidence            456788998                          7 9999986543321   1  111111112233445566899999


Q ss_pred             HcccccCCCCCCHHHHHHHHHhcc
Q 039505          312 ASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       312 ~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                      .||+.+|++||++.+|++.|+.+-
T Consensus       607 ~cl~~dP~~RPs~~~l~~~L~~~~  630 (635)
T 4fl3_A          607 LCWTYDVENRPGFAAVELRLRNYY  630 (635)
T ss_dssp             HHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             HHcCCCHhHCcCHHHHHHHHHHHH
Confidence            999999999999999999998764

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.81  E-value=3.2e-20  Score=173.20  Aligned_cols=164  Identities=18%  Similarity=0.228  Sum_probs=108.3

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc----------c--------------EE-EeeCC---c
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV----------P--------------IV-ECHVG---A  208 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~----------~--------------Lv-~c~~~---~  208 (342)
                      +.|.  +.||+|+||.||+|....+  .||||+++........          +              ++ ++...   +
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   90 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   90 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            3455  8999999999999998754  9999999765432211          1              33 44433   3


Q ss_pred             EEE--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC------ccccCCCCCc
Q 039505          209 LIT--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS------RISPVEGGTH  254 (342)
Q Consensus       209 lv~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a------~~~~~~~~~~  254 (342)
                      +|+  +                          +++||+|||+   .+|+||||||+|||++.+.      ++.+++....
T Consensus        91 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~  167 (326)
T 2y0a_A           91 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK  167 (326)
T ss_dssp             EEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred             EEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHH---CCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeE
Confidence            333  1                          8999999999   9999999999999998763      4444433221


Q ss_pred             -----cccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHH
Q 039505          255 -----MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISV  303 (342)
Q Consensus       255 -----~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~  303 (342)
                           ......||+.|+|                          ||+.|+.......  .+...................
T Consensus       168 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  245 (326)
T 2y0a_A          168 IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE--TLANVSAVNYEFEDEYFSNTS  245 (326)
T ss_dssp             CCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH--HHHHHHHTCCCCCHHHHTTSC
T ss_pred             CCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH--HHHHHHhcCCCcCccccccCC
Confidence                 1233679999998                          8888886543221  000000011111110111223


Q ss_pred             HHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          304 GKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       304 ~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ..+.+++.+||+.+|++|||+.|+++
T Consensus       246 ~~~~~li~~~L~~dP~~Rpt~~e~l~  271 (326)
T 2y0a_A          246 ALAKDFIRRLLVKDPKKRMTIQDSLQ  271 (326)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHhc
Confidence            45789999999999999999999986

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.81  E-value=4.5e-20  Score=186.68  Aligned_cols=162  Identities=16%  Similarity=0.185  Sum_probs=111.4

Q ss_pred             ccCcCCCeeEEEEEEC---CC-eEEEEEccCCCCCCCcc-------------------EE-EeeCC--cEEE--E-----
Q 039505          166 VPYKGGFITVYHGQLV---KS-EVAMKMLSPSSSQGHVP-------------------IV-ECHVG--ALIT--I-----  212 (342)
Q Consensus       166 ~lG~G~fG~Vykg~~~---~~-~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~--~lv~--m-----  212 (342)
                      .||+|+||.||+|.+.   ++ .||||+++........+                   ++ +|..+  ++|+  +     
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~lv~E~~~~g~L  422 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPL  422 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEESSSEEEEEECCTTCBH
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEeccCCeEEEEEeCCCCcH
Confidence            7999999999999875   23 79999998754332211                   45 66554  4444  2     


Q ss_pred             ----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc---------cccc
Q 039505          213 ----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM---------STTI  259 (342)
Q Consensus       213 ----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~---------~~~~  259 (342)
                                            +++||+|||+   .+|+||||||+|||++++  .++.+++.....         ....
T Consensus       423 ~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~  499 (613)
T 2ozo_A          423 HKFLVGKREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG  499 (613)
T ss_dssp             HHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC------------
T ss_pred             HHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCC
Confidence                                  8999999999   999999999999999988  455554433211         1113


Q ss_pred             ccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHH
Q 039505          260 AGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMA  312 (342)
Q Consensus       260 ~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~  312 (342)
                      .+++.|+|                          | |+.||.......   +..  .+........+..+...+.+++..
T Consensus       500 ~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~---~~~--~i~~~~~~~~p~~~~~~l~~li~~  574 (613)
T 2ozo_A          500 KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE---VMA--FIEQGKRMECPPECPPELYALMSD  574 (613)
T ss_dssp             --CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH---HHH--HHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred             CCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH---HHH--HHHcCCCCCCCCcCCHHHHHHHHH
Confidence            45678888                          6 999998654322   111  111111122334455678999999


Q ss_pred             cccccCCCCCCHHHHHHHHHhcc
Q 039505          313 SVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       313 Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                      ||+.+|++||++.+|++.|+.+.
T Consensus       575 cl~~dP~~RPs~~~l~~~L~~~~  597 (613)
T 2ozo_A          575 CWIYKWEDRPDFLTVEQRMRACY  597 (613)
T ss_dssp             TTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             HcCCChhHCcCHHHHHHHHHHHH
Confidence            99999999999999999998863

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.81  E-value=4.2e-20  Score=170.40  Aligned_cols=167  Identities=19%  Similarity=0.239  Sum_probs=107.5

Q ss_pred             hhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc---------c-----------------EE-EeeCC-
Q 039505          160 TNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV---------P-----------------IV-ECHVG-  207 (342)
Q Consensus       160 t~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~---------~-----------------Lv-~c~~~-  207 (342)
                      +++|.  +.||+|+||+||+|+...+  .||||++.........         +                 ++ +|... 
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~   87 (308)
T 3g33_A            8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR   87 (308)
T ss_dssp             --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccC
Confidence            45676  8999999999999997554  9999998743321110         0                 44 44332 


Q ss_pred             -------cEEE--E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccC
Q 039505          208 -------ALIT--I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPV  249 (342)
Q Consensus       208 -------~lv~--m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~  249 (342)
                             ++++  +                           +++||+|||+   .+|+||||||+|||++.+  .++.++
T Consensus        88 ~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~Df  164 (308)
T 3g33_A           88 TDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADF  164 (308)
T ss_dssp             SSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCTTTEEECTTSCEEECSC
T ss_pred             CCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCEEEeeC
Confidence                   2222  1                           8899999999   899999999999999988  444444


Q ss_pred             CCCCc-----cccccccCcceee--------------------------cCCCCcccccccc-cccccc-c---------
Q 039505          250 EGGTH-----MSTTIAGTAGFLN--------------------------TKNPVISKSIENG-NSHLRD-K---------  287 (342)
Q Consensus       250 ~~~~~-----~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~-~~~l~~-~---------  287 (342)
                      +....     ......||+.|+|                          ||+.||....... ...+.. .         
T Consensus       165 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  244 (308)
T 3g33_A          165 GLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP  244 (308)
T ss_dssp             SCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSC
T ss_pred             ccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcc
Confidence            43321     2234678999998                          8999987654321 001110 0         


Q ss_pred             ---ccccccCCC--C-----CChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          288 ---STVDLSFKG--E-----FDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       288 ---~~~d~~l~~--~-----~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                         .........  .     ...+....+.+++.+||+.||++|||+.|+++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  296 (308)
T 3g33_A          245 RDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ  296 (308)
T ss_dssp             SSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             chhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence               000000000  0     01123456889999999999999999999985

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.81  E-value=3.3e-20  Score=180.65  Aligned_cols=165  Identities=18%  Similarity=0.170  Sum_probs=108.1

Q ss_pred             hhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc------c--------------EE-EeeCC---cEEE
Q 039505          160 TNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV------P--------------IV-ECHVG---ALIT  211 (342)
Q Consensus       160 t~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~------~--------------Lv-~c~~~---~lv~  211 (342)
                      .++|.  +.||+|+||+||+|....+  .+|+|++.........      +              ++ ++.+.   ++|+
T Consensus        10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~   89 (444)
T 3soa_A           10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF   89 (444)
T ss_dssp             HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence            45566  8999999999999998654  9999999765422111      1              44 44443   4443


Q ss_pred             --E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-----CccccCCCCCc----
Q 039505          212 --I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-----SRISPVEGGTH----  254 (342)
Q Consensus       212 --m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-----a~~~~~~~~~~----  254 (342)
                        +                          +++||+|||+   .+|+||||||+|||++.+     .++.+++....    
T Consensus        90 E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~---~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~  166 (444)
T 3soa_A           90 DLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE  166 (444)
T ss_dssp             CCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTT
T ss_pred             EeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCC
Confidence              1                          8999999999   999999999999999853     34555443321    


Q ss_pred             --cccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHH
Q 039505          255 --MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKA  306 (342)
Q Consensus       255 --~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l  306 (342)
                        ......||++|+|                          +|+.||...........+.....+  ............+
T Consensus       167 ~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~  244 (444)
T 3soa_A          167 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD--FPSPEWDTVTPEA  244 (444)
T ss_dssp             CCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCC--CCTTTTTTSCHHH
T ss_pred             CceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCC--CCccccccCCHHH
Confidence              1233679999999                          899998765432200000011111  1111112334558


Q ss_pred             HHHHHHcccccCCCCCCHHHHHH
Q 039505          307 VEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       307 ~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      .+++.+||+.||++|||+.|+++
T Consensus       245 ~~li~~~L~~dP~~Rpta~e~L~  267 (444)
T 3soa_A          245 KDLINKMLTINPSKRITAAEALK  267 (444)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHcCCChhHCCCHHHHhc
Confidence            89999999999999999999975

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.81  E-value=4.1e-20  Score=175.31  Aligned_cols=162  Identities=19%  Similarity=0.230  Sum_probs=108.3

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC----------cc--------------EE-EeeCC---c
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH----------VP--------------IV-ECHVG---A  208 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~----------~~--------------Lv-~c~~~---~  208 (342)
                      +.|.  +.||+|+||+||+|....+  .||||+++.......          .+              ++ ++...   +
T Consensus        12 ~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~   91 (361)
T 2yab_A           12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVV   91 (361)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             hceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEE
Confidence            4455  8999999999999998754  999999986543221          01              33 44433   3


Q ss_pred             EEE--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC------ccccCCCCCc
Q 039505          209 LIT--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS------RISPVEGGTH  254 (342)
Q Consensus       209 lv~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a------~~~~~~~~~~  254 (342)
                      +|+  +                          ++.||+|||+   .+|+||||||+|||++++.      ++.+++....
T Consensus        92 lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~  168 (361)
T 2yab_A           92 LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE  168 (361)
T ss_dssp             EEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEE
T ss_pred             EEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeCCCCCccCEEEEecCCceE
Confidence            333  1                          8999999999   9999999999999998762      3444433221


Q ss_pred             -----cccccccCcceee--------------------------cCCCCccccccccccccccccccccc--CCCCCChH
Q 039505          255 -----MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLS--FKGEFDII  301 (342)
Q Consensus       255 -----~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~--l~~~~~~~  301 (342)
                           ......||++|+|                          ||+.||.......   +. ..+....  ........
T Consensus       169 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~---~~-~~i~~~~~~~~~~~~~~  244 (361)
T 2yab_A          169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE---TL-ANITAVSYDFDEEFFSQ  244 (361)
T ss_dssp             CCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH---HH-HHHHTTCCCCCHHHHTT
T ss_pred             cCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH---HH-HHHHhcCCCCCchhccC
Confidence                 1234679999998                          8999987653322   00 0011110  10000112


Q ss_pred             HHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          302 SVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       302 ~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ....+.+++..||+.+|++|||+.|+++
T Consensus       245 ~s~~~~~li~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          245 TSELAKDFIRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            2345889999999999999999999874

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.81  E-value=2.2e-20  Score=174.47  Aligned_cols=117  Identities=12%  Similarity=0.064  Sum_probs=80.1

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc--------cccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH--------MSTTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~--------~~~~~~Gt~~y~a---------------  267 (342)
                      +++||+|||+   .+|+||||||+|||++++  .++.+++....        ......||+.|+|               
T Consensus       183 i~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di  259 (343)
T 1luf_A          183 VAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDV  259 (343)
T ss_dssp             HHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHH
T ss_pred             HHHHHHHHHh---CCeecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCccccc
Confidence            7889999999   999999999999999988  44444332211        1123567888988               


Q ss_pred             -----------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhcc
Q 039505          268 -----------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       268 -----------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                                 | |+.|+.......   +. ..+.+... ...+......+.+++.+||+.+|++|||+.++++.|+++.
T Consensus       260 ~slG~il~el~t~g~~p~~~~~~~~---~~-~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~  334 (343)
T 1luf_A          260 WAYGVVLWEIFSYGLQPYYGMAHEE---VI-YYVRDGNI-LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC  334 (343)
T ss_dssp             HHHHHHHHHHHTTTCCTTTTSCHHH---HH-HHHHTTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHhcCCCcCCCCChHH---HH-HHHhCCCc-CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHH
Confidence                       7 888987654321   11 01111111 1122334456889999999999999999999999999987


Q ss_pred             CC
Q 039505          336 GS  337 (342)
Q Consensus       336 ~~  337 (342)
                      +.
T Consensus       335 ~~  336 (343)
T 1luf_A          335 ER  336 (343)
T ss_dssp             C-
T ss_pred             hh
Confidence            64

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.80  E-value=1.7e-20  Score=176.31  Aligned_cols=156  Identities=17%  Similarity=0.190  Sum_probs=106.2

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCC---CCCC----cc--------------EE-EeeCC---cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSS---SQGH----VP--------------IV-ECHVG---ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~---~~~~----~~--------------Lv-~c~~~---~lv~--m---  212 (342)
                      +.||+|+||+||+|.+..+  .||||++....   ....    .+              ++ ++...   ++|+  +   
T Consensus        15 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~g~   94 (336)
T 3h4j_B           15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGE   94 (336)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCCEE
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECCCCc
Confidence            8999999999999998654  99999986431   1111    01              44 44444   4444  1   


Q ss_pred             ----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-----cccccccCc
Q 039505          213 ----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-----MSTTIAGTA  263 (342)
Q Consensus       213 ----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-----~~~~~~Gt~  263 (342)
                                            +++||+|||+   .+|+||||||+|||++++  .++.+++....     .....+||+
T Consensus        95 l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~~~~gt~  171 (336)
T 3h4j_B           95 LFDYIVEKKRMTEDEGRRFFQQIICAIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSP  171 (336)
T ss_dssp             HHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTCCCTTST
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCchhhEEEcCCCCEEEEEeccceeccCCcccccccCCc
Confidence                                  8999999999   899999999999999988  44555443321     123467999


Q ss_pred             ceee---------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccc
Q 039505          264 GFLN---------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSS  316 (342)
Q Consensus       264 ~y~a---------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~  316 (342)
                      .|+|                           ||+.||+......   +.. .+....  ...+......+.+++.+||+.
T Consensus       172 ~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~---~~~-~i~~~~--~~~p~~~s~~~~~li~~~L~~  245 (336)
T 3h4j_B          172 NYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN---LFK-KVNSCV--YVMPDFLSPGAQSLIRRMIVA  245 (336)
T ss_dssp             TTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTT---CBC-CCCSSC--CCCCTTSCHHHHHHHHTTSCS
T ss_pred             CcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHH---HHH-HHHcCC--CCCcccCCHHHHHHHHHHcCC
Confidence            9998                           8999987653322   110 011100  111222344578899999999


Q ss_pred             cCCCCCCHHHHHH
Q 039505          317 KVNRRPLMNQVVM  329 (342)
Q Consensus       317 ~P~~RPsm~eV~~  329 (342)
                      ||.+|||+.|+++
T Consensus       246 dP~~Rpt~~eil~  258 (336)
T 3h4j_B          246 DPMQRITIQEIRR  258 (336)
T ss_dssp             SGGGSCCHHHHTT
T ss_pred             ChhHCcCHHHHHh
Confidence            9999999999974

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.80  E-value=5.6e-20  Score=168.25  Aligned_cols=163  Identities=17%  Similarity=0.195  Sum_probs=107.5

Q ss_pred             cccCcCCCeeEEEEEEC--CC--eEEEEEccCCCCCCCc------c--------------EE-EeeCC--cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLV--KS--EVAMKMLSPSSSQGHV------P--------------IV-ECHVG--ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~--~~--~vAVK~l~~~~~~~~~------~--------------Lv-~c~~~--~lv~--m---  212 (342)
                      +.||+|+||+||+|.+.  ..  .||||+++........      +              ++ +|..+  ++++  +   
T Consensus        23 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~  102 (291)
T 1xbb_A           23 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELG  102 (291)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEEEEECCTTE
T ss_pred             CccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECCCCcEEEEEeCCCC
Confidence            38999999999999653  32  8999999765432211      0              45 55444  4444  1   


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc---------ccc
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM---------STT  258 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~---------~~~  258 (342)
                                             +++||+|||+   .+|+||||||+|||++.+  .++.+++.....         ...
T Consensus       103 ~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~  179 (291)
T 1xbb_A          103 PLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH  179 (291)
T ss_dssp             EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC---
T ss_pred             CHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHh---CCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCccccccc
Confidence                                   8999999999   999999999999999988  344444332111         112


Q ss_pred             cccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHH
Q 039505          259 IAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAM  311 (342)
Q Consensus       259 ~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~  311 (342)
                      ..|++.|+|                          | |+.|+.......   +..  .+........+......+.+++.
T Consensus       180 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~l~~li~  254 (291)
T 1xbb_A          180 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE---VTA--MLEKGERMGCPAGCPREMYDLMN  254 (291)
T ss_dssp             -CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH---HHH--HHHTTCCCCCCTTCCHHHHHHHH
T ss_pred             CCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH---HHH--HHHcCCCCCCCCCCCHHHHHHHH
Confidence            345677887                          7 999987654322   111  11111111223334556889999


Q ss_pred             HcccccCCCCCCHHHHHHHHHhcc
Q 039505          312 ASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       312 ~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                      .||+.+|++||++.++++.|+++-
T Consensus       255 ~~l~~dp~~Rps~~~l~~~L~~~~  278 (291)
T 1xbb_A          255 LCWTYDVENRPGFAAVELRLRNYY  278 (291)
T ss_dssp             HHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             HHcCCChhhCcCHHHHHHHHHHHH
Confidence            999999999999999999998863

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.80  E-value=1.5e-19  Score=173.53  Aligned_cols=159  Identities=17%  Similarity=0.232  Sum_probs=105.0

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc----------------------EE-EeeCC---cEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP----------------------IV-ECHVG---ALI  210 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~----------------------Lv-~c~~~---~lv  210 (342)
                      ++|.  ++||+|+||+||+|+...+  .||||+++.........                      +. ++...   ++|
T Consensus        52 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV  131 (396)
T 4dc2_A           52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV  131 (396)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEE
Confidence            4566  8999999999999999865  89999997643221110                      33 33333   444


Q ss_pred             E--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCC------c
Q 039505          211 T--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGT------H  254 (342)
Q Consensus       211 ~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~------~  254 (342)
                      +  +                          ++.||+|||+   .+|+||||||+|||++.+.  ++.+++...      .
T Consensus       132 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~  208 (396)
T 4dc2_A          132 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD  208 (396)
T ss_dssp             EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred             EEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEECCCCCEEEeecceeeecccCCC
Confidence            4  2                          8899999999   9999999999999999884  444443321      1


Q ss_pred             cccccccCcceee--------------------------cCCCCcccccccc--c---ccccccccccccCCCCCChHHH
Q 039505          255 MSTTIAGTAGFLN--------------------------TKNPVISKSIENG--N---SHLRDKSTVDLSFKGEFDIISV  303 (342)
Q Consensus       255 ~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~--~---~~l~~~~~~d~~l~~~~~~~~~  303 (342)
                      .....+||+.|+|                          ||+.||.......  .   ...+...+....+  ..+....
T Consensus       209 ~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~--~~p~~~s  286 (396)
T 4dc2_A          209 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI--RIPRSLS  286 (396)
T ss_dssp             CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC--CCCTTSC
T ss_pred             ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc--CCCCcCC
Confidence            2344789999999                          9999996432111  0   0000011111111  1222334


Q ss_pred             HHHHHHHHHcccccCCCCCCH
Q 039505          304 GKAVEIAMASVSSKVNRRPLM  324 (342)
Q Consensus       304 ~~l~~l~~~Cl~~~P~~RPsm  324 (342)
                      ..+.+++.+||+.+|++||++
T Consensus       287 ~~~~~li~~lL~~dP~~R~~~  307 (396)
T 4dc2_A          287 VKAASVLKSFLNKDPKERLGC  307 (396)
T ss_dssp             HHHHHHHHHHTCSCTTTSTTC
T ss_pred             HHHHHHHHHHhcCCHhHcCCC
Confidence            558899999999999999985

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.80  E-value=3.3e-20  Score=169.09  Aligned_cols=167  Identities=17%  Similarity=0.168  Sum_probs=113.7

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC---cc--------------EE-EeeCC---cEEE--E-
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH---VP--------------IV-ECHVG---ALIT--I-  212 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~---~~--------------Lv-~c~~~---~lv~--m-  212 (342)
                      ++|.  +.||+|+||+||+|.+..+  .||||++........   .+              ++ +|...   ++|+  + 
T Consensus        13 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~   92 (288)
T 3kfa_A           13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT   92 (288)
T ss_dssp             GGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred             cceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCC
Confidence            4455  8999999999999999865  899999976432211   01              44 55443   3443  1 


Q ss_pred             ---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-------cc
Q 039505          213 ---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-------MS  256 (342)
Q Consensus       213 ---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-------~~  256 (342)
                                                 +++||+|||+   .+|+||||||+||+++.+  .++.+++....       ..
T Consensus        93 ~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~  169 (288)
T 3kfa_A           93 YGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH  169 (288)
T ss_dssp             TEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHH---HTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEE
T ss_pred             CCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHH---CCccCCCCCcceEEEcCCCCEEEccCccceeccCCccccc
Confidence                                       8899999999   899999999999999988  34444332211       11


Q ss_pred             cccccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHH
Q 039505          257 TTIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEI  309 (342)
Q Consensus       257 ~~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l  309 (342)
                      ....+|+.|+|                          | |+.|+.......   +.  +.+........+......+.++
T Consensus       170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~l~~l  244 (288)
T 3kfa_A          170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VY--ELLEKDYRMERPEGCPEKVYEL  244 (288)
T ss_dssp             TTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HH--HHHHTTCCCCCCTTCCHHHHHH
T ss_pred             cCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HH--HHHhccCCCCCCCCCCHHHHHH
Confidence            22456778887                          7 888887644322   11  1111111122233344568899


Q ss_pred             HHHcccccCCCCCCHHHHHHHHHhcc
Q 039505          310 AMASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       310 ~~~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                      +..|++.+|++|||+.++++.|+.+.
T Consensus       245 i~~~l~~dp~~Rps~~~~~~~l~~~~  270 (288)
T 3kfa_A          245 MRACWQWNPSDRPSFAEIHQAFETMF  270 (288)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHhCCChhhCcCHHHHHHHHHHHH
Confidence            99999999999999999999998764

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.80  E-value=4.4e-20  Score=167.96  Aligned_cols=168  Identities=12%  Similarity=0.102  Sum_probs=111.6

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC-----eEEEEEccCCCCCCCcc-------------------EE-EeeCC--cEEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS-----EVAMKMLSPSSSQGHVP-------------------IV-ECHVG--ALIT  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~-----~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~--~lv~  211 (342)
                      ++|.  +.||+|+||+||+|.+...     .||||++.........+                   ++ ++..+  ++++
T Consensus        12 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~   91 (281)
T 3cc6_A           12 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIM   91 (281)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSSSCEEEE
T ss_pred             cceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCEEEE
Confidence            4555  8999999999999987532     59999997653221111                   44 44444  4444


Q ss_pred             --E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc------
Q 039505          212 --I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH------  254 (342)
Q Consensus       212 --m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~------  254 (342)
                        +                           +++||+|||+   .+|+||||||+|||++.+.  ++.+++....      
T Consensus        92 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  168 (281)
T 3cc6_A           92 ELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY  168 (281)
T ss_dssp             ECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEEETTEEEECCCCGGGCC-----
T ss_pred             ecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEECCCCcEEeCccCCCcccccccc
Confidence              1                           8999999999   9999999999999999883  4444332211      


Q ss_pred             -cccccccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHH
Q 039505          255 -MSTTIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKA  306 (342)
Q Consensus       255 -~~~~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l  306 (342)
                       ......+|+.|+|                          | |+.|+.......   +..  .+........+......+
T Consensus       169 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~l  243 (281)
T 3cc6_A          169 YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD---VIG--VLEKGDRLPKPDLCPPVL  243 (281)
T ss_dssp             ----CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG---HHH--HHHHTCCCCCCTTCCHHH
T ss_pred             cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH---HHH--HHhcCCCCCCCCCCCHHH
Confidence             1122456778888                          7 999987543322   111  000000111122234558


Q ss_pred             HHHHHHcccccCCCCCCHHHHHHHHHhccC
Q 039505          307 VEIAMASVSSKVNRRPLMNQVVMVREQGNG  336 (342)
Q Consensus       307 ~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~  336 (342)
                      .+++.+||+.+|++|||+.|+++.|+.+..
T Consensus       244 ~~li~~~l~~~p~~Rps~~ell~~L~~~~~  273 (281)
T 3cc6_A          244 YTLMTRCWDYDPSDRPRFTELVCSLSDVYQ  273 (281)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence            899999999999999999999999998753

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.80  E-value=1.9e-20  Score=173.96  Aligned_cols=161  Identities=21%  Similarity=0.223  Sum_probs=95.9

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc-------------------EE-Eee--------CC---cEEE
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP-------------------IV-ECH--------VG---ALIT  211 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~-------------------Lv-~c~--------~~---~lv~  211 (342)
                      ++||+|+||.||+|++...  .||||++..........                   ++ ++.        ..   ++++
T Consensus        34 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~  113 (337)
T 3ll6_A           34 RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLT  113 (337)
T ss_dssp             EEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEE
T ss_pred             EEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEEE
Confidence            8999999999999998644  99999885432111100                   33 331        11   2222


Q ss_pred             --E----------------------------ehhhhhhhhccCCCC--eeeCCCCcceEEecCC--CccccCCCCCccc-
Q 039505          212 --I----------------------------PKEGLEYLHQGLKHP--IIQRDMKSTNILLNEK--SRISPVEGGTHMS-  256 (342)
Q Consensus       212 --m----------------------------ia~gL~yLH~~~~~~--IiHrDlKp~NILLd~~--a~~~~~~~~~~~~-  256 (342)
                        +                            +++||+|||+   .+  |+||||||+|||++.+  .++.+++...... 
T Consensus       114 e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~  190 (337)
T 3ll6_A          114 ELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR---QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISH  190 (337)
T ss_dssp             ECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSS
T ss_pred             EecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCEEEccCCcccEEECCCCCEEEecCccceeccc
Confidence              1                            8899999999   77  9999999999999988  3444443321111 


Q ss_pred             -----------------cccccCcceee-----------------------------cCCCCcccccccccccccccccc
Q 039505          257 -----------------TTIAGTAGFLN-----------------------------TKNPVISKSIENGNSHLRDKSTV  290 (342)
Q Consensus       257 -----------------~~~~Gt~~y~a-----------------------------tG~~P~~~~~~~~~~~l~~~~~~  290 (342)
                                       ....||+.|+|                             ||+.|+.......        +.
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~--------~~  262 (337)
T 3ll6_A          191 YPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR--------IV  262 (337)
T ss_dssp             CC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----------------
T ss_pred             cCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH--------hh
Confidence                             12458888887                             7888876432211        11


Q ss_pred             cccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccC
Q 039505          291 DLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNG  336 (342)
Q Consensus       291 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~  336 (342)
                      ...............+.+++..||+.+|++|||+.|+++.|+.+..
T Consensus       263 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~  308 (337)
T 3ll6_A          263 NGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAA  308 (337)
T ss_dssp             ---CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            1111111111222347789999999999999999999999988754

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.80  E-value=6.1e-20  Score=173.05  Aligned_cols=165  Identities=17%  Similarity=0.213  Sum_probs=104.8

Q ss_pred             HhhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCC--Ccc--------------EE-EeeCC---cEEE--E
Q 039505          159 VTNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQG--HVP--------------IV-ECHVG---ALIT--I  212 (342)
Q Consensus       159 at~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~--~~~--------------Lv-~c~~~---~lv~--m  212 (342)
                      ..+.|.  +.||+|+||+||+|+...+  .||||+++......  ..+              ++ +|...   ++|+  +
T Consensus        51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  130 (349)
T 2w4o_A           51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELV  130 (349)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeC
Confidence            345566  8999999999999999765  89999997653221  111              44 45444   4444  1


Q ss_pred             --------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecC---C--CccccCCCCCc-----cc
Q 039505          213 --------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNE---K--SRISPVEGGTH-----MS  256 (342)
Q Consensus       213 --------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~---~--a~~~~~~~~~~-----~~  256 (342)
                                                +++||+|||+   .+|+||||||+|||++.   +  .++.+++....     ..
T Consensus       131 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~  207 (349)
T 2w4o_A          131 TGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLM  207 (349)
T ss_dssp             CSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESSSSTTCCEEECCCC-----------
T ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCcccEEEecCCCCCCEEEccCccccccCccccc
Confidence                                      8999999999   89999999999999975   3  44555443221     12


Q ss_pred             cccccCcceee--------------------------cCCCCcccccccccccccccccccc--cCCCCCChHHHHHHHH
Q 039505          257 TTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDL--SFKGEFDIISVGKAVE  308 (342)
Q Consensus       257 ~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~--~l~~~~~~~~~~~l~~  308 (342)
                      ....||+.|+|                          ||+.|+.......  .+.. .+...  .............+.+
T Consensus       208 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--~~~~-~i~~~~~~~~~~~~~~~~~~~~~  284 (349)
T 2w4o_A          208 KTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ--FMFR-RILNCEYYFISPWWDEVSLNAKD  284 (349)
T ss_dssp             -----CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH--HHHH-HHHTTCCCCCTTTTTTSCHHHHH
T ss_pred             ccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH--HHHH-HHHhCCCccCCchhhhCCHHHHH
Confidence            33678999998                          8999986543321  1111 11111  1111122234456889


Q ss_pred             HHHHcccccCCCCCCHHHHHH
Q 039505          309 IAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       309 l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ++.+||+.+|++|||+.|+++
T Consensus       285 li~~~L~~dP~~Rpt~~e~l~  305 (349)
T 2w4o_A          285 LVRKLIVLDPKKRLTTFQALQ  305 (349)
T ss_dssp             HHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHHccCChhhCcCHHHHhc
Confidence            999999999999999999986

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.80  E-value=9.3e-20  Score=166.84  Aligned_cols=162  Identities=13%  Similarity=0.105  Sum_probs=104.7

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc------c--------------EE-EeeCC---cEEE--E----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV------P--------------IV-ECHVG---ALIT--I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~------~--------------Lv-~c~~~---~lv~--m----  212 (342)
                      +.||+|+||+||+|....+  .||||++.........      +              ++ ++..+   ++|+  +    
T Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l   87 (292)
T 3o0g_A            8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDL   87 (292)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSEEH
T ss_pred             eEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCCCH
Confidence            8899999999999999754  8999999765433221      1              44 44443   4444  2    


Q ss_pred             ----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------cccccccC
Q 039505          213 ----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIAGT  262 (342)
Q Consensus       213 ----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~Gt  262 (342)
                                            +++||+|||+   .+|+||||||+|||++.+  .++.+++....      ......||
T Consensus        88 ~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~---~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t  164 (292)
T 3o0g_A           88 KKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVT  164 (292)
T ss_dssp             HHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCCCSCCSC
T ss_pred             HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceecCCccccccCCccc
Confidence                                  8899999999   999999999999999988  44444433311      12335788


Q ss_pred             cceee---------------------------cCCCCcccccccc--cccccc-------------ccccc----cc---
Q 039505          263 AGFLN---------------------------TKNPVISKSIENG--NSHLRD-------------KSTVD----LS---  293 (342)
Q Consensus       263 ~~y~a---------------------------tG~~P~~~~~~~~--~~~l~~-------------~~~~d----~~---  293 (342)
                      +.|+|                           ||..|+.......  ...+..             ....+    +.   
T Consensus       165 ~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (292)
T 3o0g_A          165 LWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPA  244 (292)
T ss_dssp             GGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCT
T ss_pred             cCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccC
Confidence            99998                           6777753322111  000000             00000    00   


Q ss_pred             --CCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          294 --FKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       294 --l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                        ............+.+++.+|++.||++|||+.|+++
T Consensus       245 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  282 (292)
T 3o0g_A          245 TTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             TCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence              000111223456789999999999999999999985

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.80  E-value=2.1e-19  Score=168.18  Aligned_cols=118  Identities=11%  Similarity=0.143  Sum_probs=80.7

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc--------cccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH--------MSTTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~--------~~~~~~Gt~~y~a---------------  267 (342)
                      +++||+|||+   .+|+||||||+|||++.+  .++.+++....        ......||+.|+|               
T Consensus       181 i~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di  257 (344)
T 1rjb_A          181 VAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDV  257 (344)
T ss_dssp             HHHHHHHHHH---TTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHH
T ss_pred             HHHHHHHHHh---CCcccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhH
Confidence            7889999999   999999999999999988  34444332211        1223567888998               


Q ss_pred             -----------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhcc
Q 039505          268 -----------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       268 -----------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                                 | |+.|+.......  .+.  ..+........+......+.+++.+||+.+|++|||+.++++.|+.+.
T Consensus       258 ~slG~il~el~t~g~~p~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~  333 (344)
T 1rjb_A          258 WSYGILLWEIFSLGVNPYPGIPVDA--NFY--KLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQL  333 (344)
T ss_dssp             HHHHHHHHHHTTTSCCSSTTCCCSH--HHH--HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHcCCCCCcccCCcHH--HHH--HHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence                       7 999987654321  111  111111112223334556889999999999999999999999999876


Q ss_pred             CC
Q 039505          336 GS  337 (342)
Q Consensus       336 ~~  337 (342)
                      ..
T Consensus       334 ~~  335 (344)
T 1rjb_A          334 AD  335 (344)
T ss_dssp             --
T ss_pred             HH
Confidence            54

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.80  E-value=3.5e-20  Score=175.68  Aligned_cols=165  Identities=17%  Similarity=0.209  Sum_probs=110.1

Q ss_pred             hhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc------c--------------EE-EeeCC---cEEE
Q 039505          160 TNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV------P--------------IV-ECHVG---ALIT  211 (342)
Q Consensus       160 t~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~------~--------------Lv-~c~~~---~lv~  211 (342)
                      .++|.  +.||+|+||.||+|....+  .||||++.........      +              ++ ++...   ++|+
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~  107 (362)
T 2bdw_A           28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF  107 (362)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            45566  8999999999999998754  9999999765432111      1              34 44443   3444


Q ss_pred             --E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-----CccccCCCCCc----
Q 039505          212 --I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-----SRISPVEGGTH----  254 (342)
Q Consensus       212 --m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-----a~~~~~~~~~~----  254 (342)
                        +                          +++||+|||+   .+|+||||||+|||++.+     .++.+++....    
T Consensus       108 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~  184 (362)
T 2bdw_A          108 DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS  184 (362)
T ss_dssp             CCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTC
T ss_pred             ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCC
Confidence              1                          8999999999   999999999999999865     34555443321    


Q ss_pred             -cccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHH
Q 039505          255 -MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAV  307 (342)
Q Consensus       255 -~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~  307 (342)
                       ......||++|+|                          ||+.||...........+.....  .............+.
T Consensus       185 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~  262 (362)
T 2bdw_A          185 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY--DYPSPEWDTVTPEAK  262 (362)
T ss_dssp             CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--CCCTTGGGGSCHHHH
T ss_pred             cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCC--CCCcccccCCCHHHH
Confidence             1223679999998                          89999875432210000000001  111111123345688


Q ss_pred             HHHHHcccccCCCCCCHHHHHH
Q 039505          308 EIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       308 ~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      +++.+||+.+|++|||+.|+++
T Consensus       263 ~li~~~L~~dP~~R~t~~e~l~  284 (362)
T 2bdw_A          263 SLIDSMLTVNPKKRITADQALK  284 (362)
T ss_dssp             HHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHHHHcCCChhhCcCHHHHhc
Confidence            9999999999999999999874

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.80  E-value=6.2e-20  Score=173.06  Aligned_cols=161  Identities=22%  Similarity=0.263  Sum_probs=107.6

Q ss_pred             hccC--cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCCCc-------c--------------EE-EeeCC---cEEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQGHV-------P--------------IV-ECHVG---ALIT  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~~~-------~--------------Lv-~c~~~---~lv~  211 (342)
                      +.|.  +.||+|+||+||+|+... + .||||++.........       +              ++ +|...   ++|+
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  133 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM  133 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence            3455  789999999999999854 4 9999999765432211       1              44 44333   4444


Q ss_pred             --E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc--ccccc
Q 039505          212 --I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH--MSTTI  259 (342)
Q Consensus       212 --m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~--~~~~~  259 (342)
                        +                          +++||+|||+   .+|+||||||+|||++++  .++.+++....  .....
T Consensus       134 e~~~g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~  210 (348)
T 1u5q_A          134 EYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSF  210 (348)
T ss_dssp             ECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCC
T ss_pred             ecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEeeccCceecCCCCcc
Confidence              2                          8899999999   899999999999999988  45555443322  22346


Q ss_pred             ccCcceee-----------------------------cCCCCcccccccccccccc-cccccccCCCCCChHHHHHHHHH
Q 039505          260 AGTAGFLN-----------------------------TKNPVISKSIENGNSHLRD-KSTVDLSFKGEFDIISVGKAVEI  309 (342)
Q Consensus       260 ~Gt~~y~a-----------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~l~~~~~~~~~~~l~~l  309 (342)
                      .||+.|+|                             ||+.|+.......  .+.. .....+.+.   .......+.++
T Consensus       211 ~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~--~~~~~~~~~~~~~~---~~~~~~~l~~l  285 (348)
T 1u5q_A          211 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS--ALYHIAQNESPALQ---SGHWSEYFRNF  285 (348)
T ss_dssp             CSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHSCCCCCC---CTTSCHHHHHH
T ss_pred             cCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHHhcCCCCCC---CCCCCHHHHHH
Confidence            78999988                             7777776543211  1100 000111111   12233457889


Q ss_pred             HHHcccccCCCCCCHHHHHH
Q 039505          310 AMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       310 ~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      +.+||+.+|++|||+.++++
T Consensus       286 i~~~l~~dP~~Rps~~~ll~  305 (348)
T 1u5q_A          286 VDSCLQKIPQDRPTSEVLLK  305 (348)
T ss_dssp             HHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHcccChhhCcCHHHHhh
Confidence            99999999999999999874

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.80  E-value=5.2e-20  Score=175.26  Aligned_cols=165  Identities=18%  Similarity=0.248  Sum_probs=106.3

Q ss_pred             cccCcCCCeeEEEEEEC--CC---eEEEEEccCCCCCCCcc-------------------EE-EeeCC----cEEE--E-
Q 039505          165 RVPYKGGFITVYHGQLV--KS---EVAMKMLSPSSSQGHVP-------------------IV-ECHVG----ALIT--I-  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~--~~---~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~----~lv~--m-  212 (342)
                      +.||+|+||+||+|++.  ++   .||||.++........+                   ++ +|...    ++|+  + 
T Consensus        95 ~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~~  174 (373)
T 3c1x_A           95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK  174 (373)
T ss_dssp             EEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECCT
T ss_pred             cEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECCC
Confidence            78999999999999874  22   69999987543221111                   33 44322    4444  2 


Q ss_pred             --------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc----------
Q 039505          213 --------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH----------  254 (342)
Q Consensus       213 --------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~----------  254 (342)
                                                +++||+|||+   .+|+||||||+|||++++  .++.+++....          
T Consensus       175 ~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~  251 (373)
T 3c1x_A          175 HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH  251 (373)
T ss_dssp             TCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC---------------
T ss_pred             CCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCccchheEEECCCCCEEEeecccccccccccccccc
Confidence                                      8999999999   999999999999999988  44444433211          


Q ss_pred             cccccccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHH
Q 039505          255 MSTTIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAV  307 (342)
Q Consensus       255 ~~~~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~  307 (342)
                      ......+|+.|+|                          | |.+|+.......   +.. .+.... ....+..+...+.
T Consensus       252 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~---~~~-~~~~~~-~~~~p~~~~~~l~  326 (373)
T 3c1x_A          252 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITV-YLLQGR-RLLQPEYCPDPLY  326 (373)
T ss_dssp             ------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC---HHH-HHHTTC-CCCCCTTCCHHHH
T ss_pred             ccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH---HHH-HHHcCC-CCCCCCCCCHHHH
Confidence            1122457778988                          7 677776543221   110 000000 0111223445688


Q ss_pred             HHHHHcccccCCCCCCHHHHHHHHHhccCC
Q 039505          308 EIAMASVSSKVNRRPLMNQVVMVREQGNGS  337 (342)
Q Consensus       308 ~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~~  337 (342)
                      +++.+||+.+|++|||+.|+++.|+.+...
T Consensus       327 ~li~~cl~~dp~~RPs~~ell~~L~~i~~~  356 (373)
T 3c1x_A          327 EVMLKCWHPKAEMRPSFSELVSRISAIFST  356 (373)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            999999999999999999999999987644

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.80  E-value=5.9e-20  Score=169.46  Aligned_cols=170  Identities=15%  Similarity=0.190  Sum_probs=105.0

Q ss_pred             ccC--cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCCCcc---------------------EE-EeeCC---cEEE-
Q 039505          162 NFE--RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQGHVP---------------------IV-ECHVG---ALIT-  211 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~~~~---------------------Lv-~c~~~---~lv~-  211 (342)
                      +|.  +.||+|+||.||+|.... + .||||++..........                     ++ +|...   ++++ 
T Consensus        33 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  112 (310)
T 2wqm_A           33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE  112 (310)
T ss_dssp             GEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEe
Confidence            455  899999999999999864 4 99999997643222111                     33 33332   3333 


Q ss_pred             -E------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc----
Q 039505          212 -I------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH----  254 (342)
Q Consensus       212 -m------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~----  254 (342)
                       +                              +++||.|||+   .+|+||||||+|||++.+.  ++.+++....    
T Consensus       113 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~  189 (310)
T 2wqm_A          113 LADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK  189 (310)
T ss_dssp             CCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCC---------
T ss_pred             cCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCC
Confidence             1                              8899999999   9999999999999999884  4444332211    


Q ss_pred             --cccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHH
Q 039505          255 --MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKA  306 (342)
Q Consensus       255 --~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l  306 (342)
                        ......||+.|+|                          ||+.|+........ .+.. .+................+
T Consensus       190 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~l  267 (310)
T 2wqm_A          190 TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY-SLCK-KIEQCDYPPLPSDHYSEEL  267 (310)
T ss_dssp             ---------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHH-HHHH-HHHTTCSCCCCTTTSCHHH
T ss_pred             CccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHH-HHHH-HhhcccCCCCcccccCHHH
Confidence              1123468888888                          88888865432110 1110 0111111111112234558


Q ss_pred             HHHHHHcccccCCCCCCHHHHHHHHHhccC
Q 039505          307 VEIAMASVSSKVNRRPLMNQVVMVREQGNG  336 (342)
Q Consensus       307 ~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~  336 (342)
                      .+++.+||+.+|++|||+.+|++.|++++.
T Consensus       268 ~~li~~~l~~dp~~Rps~~~il~~l~~l~~  297 (310)
T 2wqm_A          268 RQLVNMCINPDPEKRPDVTYVYDVAKRMHA  297 (310)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence            899999999999999999999999998864

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.80  E-value=1.5e-19  Score=165.98  Aligned_cols=162  Identities=18%  Similarity=0.190  Sum_probs=103.4

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCC--------------------------Cc----c------
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQG--------------------------HV----P------  200 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~--------------------------~~----~------  200 (342)
                      ++|.  +.||+|+||.||+|+...+  .||||++.......                          .+    +      
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~   92 (298)
T 2zv2_A           13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK   92 (298)
T ss_dssp             TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred             cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence            3455  8999999999999998654  89999997653111                          00    1      


Q ss_pred             --------EE-EeeC--C---cEEE--E-------------------------ehhhhhhhhccCCCCeeeCCCCcceEE
Q 039505          201 --------IV-ECHV--G---ALIT--I-------------------------PKEGLEYLHQGLKHPIIQRDMKSTNIL  239 (342)
Q Consensus       201 --------Lv-~c~~--~---~lv~--m-------------------------ia~gL~yLH~~~~~~IiHrDlKp~NIL  239 (342)
                              ++ ++..  +   ++|+  +                         +++||+|||+   .+|+||||||+|||
T Consensus        93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil  169 (298)
T 2zv2_A           93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKPSNLL  169 (298)
T ss_dssp             CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEE
T ss_pred             CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEE
Confidence                    44 4443  2   4444  1                         8999999999   89999999999999


Q ss_pred             ecCC--CccccCCCCCc------cccccccCcceee-----------------------------cCCCCcccccccccc
Q 039505          240 LNEK--SRISPVEGGTH------MSTTIAGTAGFLN-----------------------------TKNPVISKSIENGNS  282 (342)
Q Consensus       240 Ld~~--a~~~~~~~~~~------~~~~~~Gt~~y~a-----------------------------tG~~P~~~~~~~~~~  282 (342)
                      ++.+  .++.+++....      ......||+.|+|                             ||+.||.......  
T Consensus       170 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~--  247 (298)
T 2zv2_A          170 VGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC--  247 (298)
T ss_dssp             ECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--
T ss_pred             ECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHH--
Confidence            9988  44444443211      1233578898887                             7777776432111  


Q ss_pred             cccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          283 HLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       283 ~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                       +. ..+................+.+++.+||+.+|++|||+.|+++
T Consensus       248 -~~-~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          248 -LH-SKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             -HH-HHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             -HH-HHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence             00 0011111111111223455889999999999999999999874

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.80  E-value=7e-20  Score=167.24  Aligned_cols=163  Identities=17%  Similarity=0.184  Sum_probs=111.0

Q ss_pred             cccCcCCCeeEEEEEEC---CC-eEEEEEccCCCCCCCcc-------------------EE-EeeCC--cEEE--E----
Q 039505          165 RVPYKGGFITVYHGQLV---KS-EVAMKMLSPSSSQGHVP-------------------IV-ECHVG--ALIT--I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~---~~-~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~--~lv~--m----  212 (342)
                      +.||+|+||.||+|.+.   .+ .||||+++........+                   ++ +|..+  ++|+  +    
T Consensus        16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~   95 (287)
T 1u59_A           16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGP   95 (287)
T ss_dssp             EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTEE
T ss_pred             ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecCCCcEEEEEeCCCCC
Confidence            48999999999999874   33 89999998653221111                   44 55444  4444  1    


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc---------ccc
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM---------STT  258 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~---------~~~  258 (342)
                                             +++||.|||+   .+|+||||||+|||++.+  .++.+++.....         ...
T Consensus        96 L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~  172 (287)
T 1u59_A           96 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA  172 (287)
T ss_dssp             HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCS
T ss_pred             HHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCchheEEEcCCCCEEECcccceeeeccCcceeecccc
Confidence                                   8999999999   999999999999999987  344444332111         122


Q ss_pred             cccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHH
Q 039505          259 IAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAM  311 (342)
Q Consensus       259 ~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~  311 (342)
                      ..||+.|+|                          | |+.|+.......   +..  .+........+......+.+++.
T Consensus       173 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~~--~i~~~~~~~~~~~~~~~l~~li~  247 (287)
T 1u59_A          173 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE---VMA--FIEQGKRMECPPECPPELYALMS  247 (287)
T ss_dssp             SCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH---HHH--HHHTTCCCCCCTTCCHHHHHHHH
T ss_pred             ccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH---HHH--HHhcCCcCCCCCCcCHHHHHHHH
Confidence            346788888                          7 999987654322   111  01111111223344556889999


Q ss_pred             HcccccCCCCCCHHHHHHHHHhcc
Q 039505          312 ASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       312 ~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                      .||+.+|++||++.++++.|+.+.
T Consensus       248 ~~l~~~p~~Rps~~~l~~~l~~~~  271 (287)
T 1u59_A          248 DCWIYKWEDRPDFLTVEQRMRACY  271 (287)
T ss_dssp             HTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHcCCChhhCcCHHHHHHHHHHHH
Confidence            999999999999999999998874

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.80  E-value=2e-20  Score=175.75  Aligned_cols=171  Identities=13%  Similarity=0.151  Sum_probs=105.1

Q ss_pred             ccC--cccCcCCCeeEEEEEECC---C--eEEEEEccCCCCCCCc-----------------------------cEE-Ee
Q 039505          162 NFE--RVPYKGGFITVYHGQLVK---S--EVAMKMLSPSSSQGHV-----------------------------PIV-EC  204 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~---~--~vAVK~l~~~~~~~~~-----------------------------~Lv-~c  204 (342)
                      +|.  +.||+|+||+||+|....   .  .+|||++.........                             .++ ++
T Consensus        38 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~  117 (345)
T 2v62_A           38 QWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSG  117 (345)
T ss_dssp             EEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEE
T ss_pred             eEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeeccc
Confidence            454  899999999999999975   3  8999998765321000                             033 33


Q ss_pred             eC----C---cEEE--E-------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--cccc
Q 039505          205 HV----G---ALIT--I-------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISP  248 (342)
Q Consensus       205 ~~----~---~lv~--m-------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~  248 (342)
                      ..    .   ++|+  +                         +++||+|||+   .+|+||||||+|||++.+.  .+..
T Consensus       118 ~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kL  194 (345)
T 2v62_A          118 LTEFKGRSYRFMVMERLGIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHE---NEYVHGDIKAANLLLGYKNPDQVYL  194 (345)
T ss_dssp             EEESSSCEEEEEEEECEEEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEESSSTTSEEE
T ss_pred             ccccCCCcEEEEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCcCHHHEEEccCCCCcEEE
Confidence            22    2   3333  2                         8999999999   8999999999999998762  3333


Q ss_pred             CCCCCcc---------------ccccccCcceee--------------------------cCCCCcccccccccccccc-
Q 039505          249 VEGGTHM---------------STTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRD-  286 (342)
Q Consensus       249 ~~~~~~~---------------~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~-  286 (342)
                      .+++...               .....||+.|+|                          ||+.||........ .+.. 
T Consensus       195 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~-~~~~~  273 (345)
T 2v62_A          195 ADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPV-AVQTA  273 (345)
T ss_dssp             CCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHH-HHHHH
T ss_pred             EeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccH-HHHHH
Confidence            3333221               133579999998                          99999965322210 0000 


Q ss_pred             cccccccCCCC-----CChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccC
Q 039505          287 KSTVDLSFKGE-----FDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNG  336 (342)
Q Consensus       287 ~~~~d~~l~~~-----~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~  336 (342)
                      .....+.+...     ........+.+++..||+.+|++||++.+|++.|+.+..
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~  328 (345)
T 2v62_A          274 KTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI  328 (345)
T ss_dssp             HHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred             HHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence            00001111000     001234468899999999999999999999999998654

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.80  E-value=4.7e-20  Score=169.23  Aligned_cols=168  Identities=16%  Similarity=0.140  Sum_probs=107.2

Q ss_pred             cccCcCCCeeEEEEEEC-----CC-eEEEEEccCCCCCCCcc-------------------EE-EeeCC-----cEEE--
Q 039505          165 RVPYKGGFITVYHGQLV-----KS-EVAMKMLSPSSSQGHVP-------------------IV-ECHVG-----ALIT--  211 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~-----~~-~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~-----~lv~--  211 (342)
                      +.||+|+||.||+|++.     .+ .||||++.........+                   ++ +|...     ++++  
T Consensus        27 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~  106 (302)
T 4e5w_A           27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEF  106 (302)
T ss_dssp             EEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEEEC
T ss_pred             hccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEEEe
Confidence            88999999999999952     33 89999997654322211                   34 44332     3333  


Q ss_pred             E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc--------
Q 039505          212 I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH--------  254 (342)
Q Consensus       212 m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~--------  254 (342)
                      +                           +++||+|||+   .+|+||||||+|||++.+  .++.+++....        
T Consensus       107 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  183 (302)
T 4e5w_A          107 LPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYY  183 (302)
T ss_dssp             CTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCCEE
T ss_pred             CCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhc---CCcccCCCchheEEEcCCCCEEECcccccccccCCCcce
Confidence            1                           8899999999   999999999999999888  44444433211        


Q ss_pred             -cccccccCcceee--------------------------cCCCCccccccccc-------cccc--c-cccccccCCCC
Q 039505          255 -MSTTIAGTAGFLN--------------------------TKNPVISKSIENGN-------SHLR--D-KSTVDLSFKGE  297 (342)
Q Consensus       255 -~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~-------~~l~--~-~~~~d~~l~~~  297 (342)
                       ......||..|+|                          ||+.|+........       ....  . ...+.......
T Consensus       184 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (302)
T 4e5w_A          184 TVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLP  263 (302)
T ss_dssp             ECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCC
T ss_pred             eccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCCC
Confidence             1223567788888                          88887643211000       0000  0 01111111122


Q ss_pred             CChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhcc
Q 039505          298 FDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       298 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                      .+......+.+++.+||+.+|++|||+.++++.|+++.
T Consensus       264 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll  301 (302)
T 4e5w_A          264 CPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL  301 (302)
T ss_dssp             CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence            23344556889999999999999999999999999864

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.80  E-value=6.8e-20  Score=167.53  Aligned_cols=162  Identities=17%  Similarity=0.192  Sum_probs=104.1

Q ss_pred             cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCC--c----c--------------EE-EeeCC---cEEE--E-----
Q 039505          165 RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGH--V----P--------------IV-ECHVG---ALIT--I-----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~--~----~--------------Lv-~c~~~---~lv~--m-----  212 (342)
                      +.||+|+||+||+|+...+ .||||++........  .    +              ++ ++...   ++|+  +     
T Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~   87 (288)
T 1ob3_A            8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLK   87 (288)
T ss_dssp             EEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSEEHH
T ss_pred             hhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCCCHH
Confidence            7899999999999999767 999999865432211  1    1              44 44443   4444  1     


Q ss_pred             ---------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCccccCCCCCc--------cccccccCc
Q 039505          213 ---------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH--------MSTTIAGTA  263 (342)
Q Consensus       213 ---------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~~~~~~~~~~--------~~~~~~Gt~  263 (342)
                                           +++||+|||+   .+|+||||||+|||++.+..+...+++..        ......||+
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~  164 (288)
T 1ob3_A           88 KLLDVCEGGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTL  164 (288)
T ss_dssp             HHHHTSTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------CCC
T ss_pred             HHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEeECccccccCccccccccccccc
Confidence                                 8999999999   99999999999999998844433333321        112346888


Q ss_pred             ceee---------------------------cCCCCcccccccc-cccccc---------------cccccccCCC----
Q 039505          264 GFLN---------------------------TKNPVISKSIENG-NSHLRD---------------KSTVDLSFKG----  296 (342)
Q Consensus       264 ~y~a---------------------------tG~~P~~~~~~~~-~~~l~~---------------~~~~d~~l~~----  296 (342)
                      .|+|                           ||+.||....... ...+..               ....++....    
T Consensus       165 ~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (288)
T 1ob3_A          165 WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPL  244 (288)
T ss_dssp             TTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCC
T ss_pred             cccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCc
Confidence            8888                           8888887543211 000000               0001111110    


Q ss_pred             ---CCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          297 ---EFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       297 ---~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                         .........+.+++.+||+.||++|||+.|+++
T Consensus       245 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          245 PWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (288)
T ss_dssp             CGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence               011123456789999999999999999999975

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.80  E-value=5.2e-20  Score=172.95  Aligned_cols=160  Identities=19%  Similarity=0.220  Sum_probs=107.3

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCC---CCCCc----c--------------EE-EeeCC---cEEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSS---SQGHV----P--------------IV-ECHVG---ALIT  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~---~~~~~----~--------------Lv-~c~~~---~lv~  211 (342)
                      ++|.  +.||+|+||+||+|+...+  .||||+++...   .....    +              +. ++...   ++|+
T Consensus         5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   84 (337)
T 1o6l_A            5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence            4566  8999999999999998754  99999986531   11100    0              33 33333   3333


Q ss_pred             --E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------c
Q 039505          212 --I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------M  255 (342)
Q Consensus       212 --m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~  255 (342)
                        +                          ++.||+|||+   .+|+||||||+|||++.+  .++.+++....      .
T Consensus        85 E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~  161 (337)
T 1o6l_A           85 EYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT  161 (337)
T ss_dssp             ECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCC
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCCc
Confidence              1                          8999999999   999999999999999988  44444433211      2


Q ss_pred             ccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHH
Q 039505          256 STTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEI  309 (342)
Q Consensus       256 ~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l  309 (342)
                      ....+||+.|+|                          ||+.||.......   +.. .+....+  ..+......+.++
T Consensus       162 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~---~~~-~i~~~~~--~~p~~~s~~~~~l  235 (337)
T 1o6l_A          162 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER---LFE-LILMEEI--RFPRTLSPEAKSL  235 (337)
T ss_dssp             BCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHH-HHHHCCC--CCCTTSCHHHHHH
T ss_pred             ccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHH---HHH-HHHcCCC--CCCCCCCHHHHHH
Confidence            234689999998                          8999987543221   111 1111111  1122234458889


Q ss_pred             HHHcccccCCCCC-----CHHHHHH
Q 039505          310 AMASVSSKVNRRP-----LMNQVVM  329 (342)
Q Consensus       310 ~~~Cl~~~P~~RP-----sm~eV~~  329 (342)
                      +.+||+.+|++||     ++.|+++
T Consensus       236 i~~lL~~dP~~R~g~~~~~~~ei~~  260 (337)
T 1o6l_A          236 LAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             HHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             HHHHhhcCHHHhcCCCCCCHHHHHc
Confidence            9999999999999     8998865

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.80  E-value=9.4e-20  Score=167.98  Aligned_cols=117  Identities=15%  Similarity=0.160  Sum_probs=81.2

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc--------cccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH--------MSTTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~--------~~~~~~Gt~~y~a---------------  267 (342)
                      +++||+|||+   .+|+||||||+|||++++  .++.+++....        ......+|+.|+|               
T Consensus       159 i~~~l~~lH~---~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di  235 (314)
T 2ivs_A          159 ISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDV  235 (314)
T ss_dssp             HHHHHHHHHH---TTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHH
T ss_pred             HHHHHHHHHH---CCCcccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhH
Confidence            8899999999   999999999999999988  44444433211        1122456778888               


Q ss_pred             -----------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhcc
Q 039505          268 -----------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       268 -----------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                                 | |+.|+.......   +..  .+........+......+.+++.+||+.+|++|||+.++++.|+++.
T Consensus       236 ~slG~il~el~t~g~~p~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~  310 (314)
T 2ivs_A          236 WSFGVLLWEIVTLGGNPYPGIPPER---LFN--LLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM  310 (314)
T ss_dssp             HHHHHHHHHHHTTSCCSSTTCCGGG---HHH--HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCCCCCHHH---HHH--HhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence                       7 999987654322   111  11111111223334456889999999999999999999999999875


Q ss_pred             CC
Q 039505          336 GS  337 (342)
Q Consensus       336 ~~  337 (342)
                      ..
T Consensus       311 ~~  312 (314)
T 2ivs_A          311 VK  312 (314)
T ss_dssp             HT
T ss_pred             hh
Confidence            43

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.80  E-value=6.6e-20  Score=168.03  Aligned_cols=167  Identities=19%  Similarity=0.243  Sum_probs=106.9

Q ss_pred             cccCcCCCeeEEEEEECCC-----eEEEEEccCCCCCCCcc-------------------EE-EeeCC----cEEE--E-
Q 039505          165 RVPYKGGFITVYHGQLVKS-----EVAMKMLSPSSSQGHVP-------------------IV-ECHVG----ALIT--I-  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~-----~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~----~lv~--m-  212 (342)
                      +.||+|+||+||+|++.+.     .||||.++........+                   ++ +|...    ++++  + 
T Consensus        31 ~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~  110 (298)
T 3f66_A           31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK  110 (298)
T ss_dssp             EEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECCT
T ss_pred             ceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCCC
Confidence            8999999999999997532     58999987643221111                   33 44332    3333  1 


Q ss_pred             --------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc----------
Q 039505          213 --------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH----------  254 (342)
Q Consensus       213 --------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~----------  254 (342)
                                                +++||+|||+   .+|+||||||+|||++++.  ++.+++....          
T Consensus       111 ~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~  187 (298)
T 3f66_A          111 HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH  187 (298)
T ss_dssp             TCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCBC-
T ss_pred             CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEECCCCCEEECcccccccccccchhccc
Confidence                                      8899999999   9999999999999999883  3443332211          


Q ss_pred             cccccccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHH
Q 039505          255 MSTTIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAV  307 (342)
Q Consensus       255 ~~~~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~  307 (342)
                      ......||+.|+|                          | |.+|+.......   +.. .+... .....+......+.
T Consensus       188 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~---~~~-~~~~~-~~~~~~~~~~~~l~  262 (298)
T 3f66_A          188 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITV-YLLQG-RRLLQPEYCPDPLY  262 (298)
T ss_dssp             ----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT---HHH-HHHTT-CCCCCCTTCCHHHH
T ss_pred             cccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH---HHH-HHhcC-CCCCCCccCCHHHH
Confidence            1223457778888                          6 555555433221   111 00000 00111222345588


Q ss_pred             HHHHHcccccCCCCCCHHHHHHHHHhccCCCC
Q 039505          308 EIAMASVSSKVNRRPLMNQVVMVREQGNGSRI  339 (342)
Q Consensus       308 ~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~~~~  339 (342)
                      +++.+||+.+|++|||+.|+++.|+++.....
T Consensus       263 ~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~  294 (298)
T 3f66_A          263 EVMLKCWHPKAEMRPSFSELVSRISAIFSTFI  294 (298)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence            99999999999999999999999999876543

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.80  E-value=3.3e-20  Score=169.11  Aligned_cols=163  Identities=15%  Similarity=0.122  Sum_probs=102.9

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc--------------------EE-EeeCC---cEEE-
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP--------------------IV-ECHVG---ALIT-  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~--------------------Lv-~c~~~---~lv~-  211 (342)
                      ++|.  +.||+|+||+||+|....+  .||||++..........                    ++ +|..+   ++|+ 
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e   86 (290)
T 3fme_A            7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME   86 (290)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEE
T ss_pred             HhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEe
Confidence            4565  8999999999999998644  99999997543211110                    44 44443   4444 


Q ss_pred             -E-----------------------------ehhhhhhhhccCCC-CeeeCCCCcceEEecCCC--ccccCCCCCc----
Q 039505          212 -I-----------------------------PKEGLEYLHQGLKH-PIIQRDMKSTNILLNEKS--RISPVEGGTH----  254 (342)
Q Consensus       212 -m-----------------------------ia~gL~yLH~~~~~-~IiHrDlKp~NILLd~~a--~~~~~~~~~~----  254 (342)
                       +                             +++||+|||+   . +|+||||||+|||++.+.  ++.+++....    
T Consensus        87 ~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  163 (290)
T 3fme_A           87 LMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDD  163 (290)
T ss_dssp             CCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---HSCCCCCCCSGGGCEECTTCCEEBCCC---------
T ss_pred             hhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeecCCccccccc
Confidence             2                             8899999999   6 999999999999999884  4444332211    


Q ss_pred             -cccccccCcceee------------------------------cCCCCcccccccccccccccccccccCCCCCChHHH
Q 039505          255 -MSTTIAGTAGFLN------------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISV  303 (342)
Q Consensus       255 -~~~~~~Gt~~y~a------------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~  303 (342)
                       ......||+.|+|                              ||+.|+.......  ... .................
T Consensus       164 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~  240 (290)
T 3fme_A          164 VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF--QQL-KQVVEEPSPQLPADKFS  240 (290)
T ss_dssp             ------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHH--HHH-HHHHHSCCCCCCTTTSC
T ss_pred             ccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchH--HHH-HHHhccCCCCcccccCC
Confidence             1122468888877                              8888886532211  000 01111111111122234


Q ss_pred             HHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          304 GKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       304 ~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ..+.+++.+||+.+|++|||+.|+++
T Consensus       241 ~~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          241 AEFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHHHhhcChhhCcCHHHHHh
Confidence            55889999999999999999999986

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.79  E-value=5.3e-20  Score=177.79  Aligned_cols=165  Identities=19%  Similarity=0.244  Sum_probs=104.1

Q ss_pred             HhhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCC-----C---C----cc--------------EE-EeeCC
Q 039505          159 VTNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQ-----G---H----VP--------------IV-ECHVG  207 (342)
Q Consensus       159 at~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~-----~---~----~~--------------Lv-~c~~~  207 (342)
                      ..++|.  +.||+|+||+||+|....+  .||||++......     .   .    .+              +. ++..+
T Consensus       133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~  212 (419)
T 3i6u_A          133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE  212 (419)
T ss_dssp             HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESS
T ss_pred             hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence            456676  8999999999999998765  9999998653210     0   0    11              33 44433


Q ss_pred             --cEEE--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-----CccccCCCC
Q 039505          208 --ALIT--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-----SRISPVEGG  252 (342)
Q Consensus       208 --~lv~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-----a~~~~~~~~  252 (342)
                        ++|+  +                          +++||+|||+   .+|+||||||+|||++.+     .++.+++..
T Consensus       213 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a  289 (419)
T 3i6u_A          213 DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHS  289 (419)
T ss_dssp             EEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSSSCCEEECCSSTT
T ss_pred             ceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCCCcceEEEeecccc
Confidence              4444  2                          8999999999   899999999999999754     445554433


Q ss_pred             Cc-----cccccccCcceee-----------------------------cCCCCcccccccccccccccccccccCC--C
Q 039505          253 TH-----MSTTIAGTAGFLN-----------------------------TKNPVISKSIENGNSHLRDKSTVDLSFK--G  296 (342)
Q Consensus       253 ~~-----~~~~~~Gt~~y~a-----------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~--~  296 (342)
                      ..     ......||++|+|                             ||+.||.......  .+.. .+......  .
T Consensus       290 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~--~~~~-~i~~~~~~~~~  366 (419)
T 3i6u_A          290 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKD-QITSGKYNFIP  366 (419)
T ss_dssp             TSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC--CHHH-HHHTTCCCCCH
T ss_pred             eecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH--HHHH-HHhcCCCCCCc
Confidence            22     1234678999988                             8888887543222  1111 00010000  0


Q ss_pred             CCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          297 EFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       297 ~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      .........+.+++.+||+.+|++|||+.|+++
T Consensus       367 ~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  399 (419)
T 3i6u_A          367 EVWAEVSEKALDLVKKLLVVDPKARFTTEEALR  399 (419)
T ss_dssp             HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             hhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence            001123456889999999999999999999885

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.79  E-value=2.9e-20  Score=173.08  Aligned_cols=170  Identities=14%  Similarity=0.062  Sum_probs=110.8

Q ss_pred             cccCcCCCeeEEEEEEC-----CC-eEEEEEccCCCCCCCc----c--------------EE-Eee--CC---cEEE--E
Q 039505          165 RVPYKGGFITVYHGQLV-----KS-EVAMKMLSPSSSQGHV----P--------------IV-ECH--VG---ALIT--I  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~-----~~-~vAVK~l~~~~~~~~~----~--------------Lv-~c~--~~---~lv~--m  212 (342)
                      +.||+|+||.||+|++.     .+ .||||++........+    +              ++ ++.  +.   ++|+  +
T Consensus        29 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~  108 (327)
T 3lxl_A           29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYL  108 (327)
T ss_dssp             EEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEECC
T ss_pred             hhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEeec
Confidence            89999999999999952     33 8999999765322111    1              33 333  22   3444  2


Q ss_pred             ---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc---------
Q 039505          213 ---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH---------  254 (342)
Q Consensus       213 ---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~---------  254 (342)
                                                 +++||+|||+   .+|+||||||+|||++.+.  ++.+++....         
T Consensus       109 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~  185 (327)
T 3lxl_A          109 PSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV  185 (327)
T ss_dssp             TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCGGGCEECCTTCSEEE
T ss_pred             CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChhhEEECCCCCEEEcccccceecccCCccce
Confidence                                       8999999999   9999999999999999883  3433332211         


Q ss_pred             cccccccCcceee--------------------------cCCCCcccccccccccc------c---c-cccccccCCCCC
Q 039505          255 MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHL------R---D-KSTVDLSFKGEF  298 (342)
Q Consensus       255 ~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l------~---~-~~~~d~~l~~~~  298 (342)
                      ......||+.|+|                          ||+.|+...........      .   . .+.+........
T Consensus       186 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (327)
T 3lxl_A          186 VREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPA  265 (327)
T ss_dssp             CSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCCCC
T ss_pred             eeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcccCCCC
Confidence            1122457788888                          89998865432110000      0   0 111112222223


Q ss_pred             ChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccCC
Q 039505          299 DIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNGS  337 (342)
Q Consensus       299 ~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~~  337 (342)
                      +......+.+++.+||+.+|++|||+.|+++.|+.+...
T Consensus       266 ~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~  304 (327)
T 3lxl_A          266 PPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSG  304 (327)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC---
T ss_pred             CCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence            344556689999999999999999999999999988543

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.79  E-value=2.5e-20  Score=176.19  Aligned_cols=160  Identities=19%  Similarity=0.257  Sum_probs=104.8

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCC---CCCc-------------------cEE-EeeCC---cEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSS---QGHV-------------------PIV-ECHVG---ALI  210 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~---~~~~-------------------~Lv-~c~~~---~lv  210 (342)
                      ++|.  ++||+|+||+||+|+...+  .||||+++....   ....                   .+. ++...   ++|
T Consensus        23 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv  102 (353)
T 3txo_A           23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFV  102 (353)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEE
Confidence            5666  8999999999999998764  999999864310   0000                   033 33333   333


Q ss_pred             E--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc------
Q 039505          211 T--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH------  254 (342)
Q Consensus       211 ~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~------  254 (342)
                      +  +                          ++.||+|||+   .+|+||||||+|||++.+.  ++.+++....      
T Consensus       103 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~  179 (353)
T 3txo_A          103 MEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGV  179 (353)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC---
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCCHHHEEECCCCCEEEccccceeecccCCc
Confidence            3  1                          8899999999   9999999999999999884  4444433221      


Q ss_pred             cccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHH
Q 039505          255 MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVE  308 (342)
Q Consensus       255 ~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~  308 (342)
                      .....+||+.|+|                          ||+.||.......   +. ..+.....  ..+......+.+
T Consensus       180 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~---~~-~~i~~~~~--~~p~~~~~~~~~  253 (353)
T 3txo_A          180 TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD---LF-EAILNDEV--VYPTWLHEDATG  253 (353)
T ss_dssp             ------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HH-HHHHHCCC--CCCTTSCHHHHH
T ss_pred             cccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHH---HH-HHHHcCCC--CCCCCCCHHHHH
Confidence            2234689999999                          9999997654322   11 11111111  112223345788


Q ss_pred             HHHHcccccCCCCCCH------HHHHH
Q 039505          309 IAMASVSSKVNRRPLM------NQVVM  329 (342)
Q Consensus       309 l~~~Cl~~~P~~RPsm------~eV~~  329 (342)
                      ++.+||+.+|++||++      .|+++
T Consensus       254 li~~lL~~dP~~R~~~~~~~~~~~il~  280 (353)
T 3txo_A          254 ILKSFMTKNPTMRLGSLTQGGEHAILR  280 (353)
T ss_dssp             HHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred             HHHHHhhhCHHHccCCcccCCHHHHhh
Confidence            9999999999999998      66653

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.79  E-value=6.7e-20  Score=166.70  Aligned_cols=165  Identities=18%  Similarity=0.217  Sum_probs=109.0

Q ss_pred             hhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc------c--------------EE-EeeCC---cEEE
Q 039505          160 TNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV------P--------------IV-ECHVG---ALIT  211 (342)
Q Consensus       160 t~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~------~--------------Lv-~c~~~---~lv~  211 (342)
                      .++|.  +.||+|+||.||+|....+  .||+|++.........      +              ++ +|..+   ++++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence            35566  8999999999999998754  9999998654322110      1              44 45444   3333


Q ss_pred             --E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-----CccccCCCCCc----
Q 039505          212 --I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-----SRISPVEGGTH----  254 (342)
Q Consensus       212 --m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-----a~~~~~~~~~~----  254 (342)
                        +                          +++||+|||+   .+|+||||||+|||++.+     .++.+++....    
T Consensus        85 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~  161 (284)
T 3kk8_A           85 DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS  161 (284)
T ss_dssp             CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS
T ss_pred             ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC
Confidence              1                          8899999999   999999999999999866     34444443311    


Q ss_pred             -cccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHH
Q 039505          255 -MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAV  307 (342)
Q Consensus       255 -~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~  307 (342)
                       ......||+.|+|                          ||+.|+...........+......  ............+.
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  239 (284)
T 3kk8_A          162 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD--YPSPEWDTVTPEAK  239 (284)
T ss_dssp             CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--CCTTTTTTSCHHHH
T ss_pred             ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhcccc--CCchhhcccCHHHH
Confidence             1123578999998                          888888654322100000011111  11111122345588


Q ss_pred             HHHHHcccccCCCCCCHHHHHH
Q 039505          308 EIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       308 ~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      +++.+||+.+|++|||+.|+++
T Consensus       240 ~li~~~l~~dp~~Rps~~~~l~  261 (284)
T 3kk8_A          240 SLIDSMLTVNPKKRITADQALK  261 (284)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHcccChhhCCCHHHHhc
Confidence            9999999999999999999985

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.79  E-value=8.5e-20  Score=167.45  Aligned_cols=170  Identities=9%  Similarity=0.016  Sum_probs=107.4

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc---------------------EE-EeeCC---cEEE-
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP---------------------IV-ECHVG---ALIT-  211 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~---------------------Lv-~c~~~---~lv~-  211 (342)
                      .|.  +.||+|+||.||+|+....  .||||++..........                     ++ ++...   ++|+ 
T Consensus        32 ~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e  111 (286)
T 3uqc_A           32 RYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAE  111 (286)
T ss_dssp             TEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEE
Confidence            455  8999999999999999764  99999998764432110                     33 44333   4444 


Q ss_pred             -E------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCccccC--CCCCccc-cccccCc
Q 039505          212 -I------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPV--EGGTHMS-TTIAGTA  263 (342)
Q Consensus       212 -m------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~~~~~--~~~~~~~-~~~~Gt~  263 (342)
                       +                        +++||+|||+   .+|+||||||+|||++++..+...  ......+ ....-+.
T Consensus       112 ~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~---~givH~Dikp~NIll~~~g~~kl~~~~~~~~~~~~~Di~sl  188 (286)
T 3uqc_A          112 WIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHR---AGVALSIDHPSRVRVSIDGDVVLAYPATMPDANPQDDIRGI  188 (286)
T ss_dssp             CCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEETTSCEEECSCCCCTTCCHHHHHHHH
T ss_pred             ecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHH---CCCccCCCCcccEEEcCCCCEEEEeccccCCCCchhHHHHH
Confidence             1                        8999999999   999999999999999988433321  1111000 0011111


Q ss_pred             c----eeecCCCCcccccccccccccc-cccccccCC--CCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccC
Q 039505          264 G----FLNTKNPVISKSIENGNSHLRD-KSTVDLSFK--GEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNG  336 (342)
Q Consensus       264 ~----y~atG~~P~~~~~~~~~~~l~~-~~~~d~~l~--~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~  336 (342)
                      |    ++.||+.||.......  .+.. ...+.....  ..........+.+++.+||+.||++| |+.|+++.|+++..
T Consensus       189 G~il~elltg~~Pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~  265 (286)
T 3uqc_A          189 GASLYALLVNRWPLPEAGVRS--GLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATA  265 (286)
T ss_dssp             HHHHHHHHHSEECSCCCSBCC--CSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHCCCCCCcCCcch--hhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhc
Confidence            1    1129999998754322  1100 011111010  01112234568899999999999999 99999999998765


Q ss_pred             C
Q 039505          337 S  337 (342)
Q Consensus       337 ~  337 (342)
                      .
T Consensus       266 ~  266 (286)
T 3uqc_A          266 V  266 (286)
T ss_dssp             -
T ss_pred             c
Confidence            4

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.79  E-value=7.6e-20  Score=171.06  Aligned_cols=164  Identities=20%  Similarity=0.225  Sum_probs=108.1

Q ss_pred             cccCcCCCeeEEEEEECCC------eEEEEEccCCCCCCCcc-------------------EE-EeeCC---cEEE--E-
Q 039505          165 RVPYKGGFITVYHGQLVKS------EVAMKMLSPSSSQGHVP-------------------IV-ECHVG---ALIT--I-  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~------~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~---~lv~--m-  212 (342)
                      +.||+|+||+||+|.+...      .||||++..........                   ++ +|...   ++|+  + 
T Consensus        50 ~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  129 (333)
T 1mqb_A           50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYME  129 (333)
T ss_dssp             EEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred             cEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCCC
Confidence            7899999999999987532      59999997643221110                   44 44443   4444  2 


Q ss_pred             --------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCcc---------
Q 039505          213 --------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHM---------  255 (342)
Q Consensus       213 --------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~~---------  255 (342)
                                                +++||+|||+   .+|+||||||+|||++.+.  ++.+++.....         
T Consensus       130 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~  206 (333)
T 1mqb_A          130 NGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYT  206 (333)
T ss_dssp             TEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC-------------
T ss_pred             CCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChheEEECCCCcEEECCCCcchhhccccccccc
Confidence                                      8899999999   8999999999999999883  44444332111         


Q ss_pred             ccccccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHH
Q 039505          256 STTIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVE  308 (342)
Q Consensus       256 ~~~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~  308 (342)
                      .....+|+.|+|                          | |+.|+.......   +.. .+.+ ......+......+.+
T Consensus       207 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~---~~~-~~~~-~~~~~~~~~~~~~l~~  281 (333)
T 1mqb_A          207 TSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE---VMK-AIND-GFRLPTPMDCPSAIYQ  281 (333)
T ss_dssp             ----CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH---HHH-HHHT-TCCCCCCTTCBHHHHH
T ss_pred             cCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHH---HHH-HHHC-CCcCCCcccCCHHHHH
Confidence            112345677887                          6 899886543221   111 0111 1111122334556889


Q ss_pred             HHHHcccccCCCCCCHHHHHHHHHhccC
Q 039505          309 IAMASVSSKVNRRPLMNQVVMVREQGNG  336 (342)
Q Consensus       309 l~~~Cl~~~P~~RPsm~eV~~~L~~i~~  336 (342)
                      ++.+||+.+|++||++.++++.|+.+..
T Consensus       282 li~~~l~~~p~~Rps~~~l~~~L~~~~~  309 (333)
T 1mqb_A          282 LMMQCWQQERARRPKFADIVSILDKLIR  309 (333)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            9999999999999999999999988754

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.79  E-value=7.3e-20  Score=166.29  Aligned_cols=161  Identities=24%  Similarity=0.334  Sum_probs=105.8

Q ss_pred             hhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCC---CCc----c--------------EE-EeeCC---cEE
Q 039505          160 TNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQ---GHV----P--------------IV-ECHVG---ALI  210 (342)
Q Consensus       160 t~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~---~~~----~--------------Lv-~c~~~---~lv  210 (342)
                      .++|.  +.||+|+||+||+|....+  .||||++......   ...    +              ++ +|...   +++
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   87 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI   87 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence            45666  8999999999999998766  8999998542110   000    0              44 55544   344


Q ss_pred             E--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCccccCCCCCc------cc
Q 039505          211 T--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH------MS  256 (342)
Q Consensus       211 ~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~~~~~~~~~~------~~  256 (342)
                      +  +                          +++||+|||+   .+|+||||||+|||++.+..+...+++..      ..
T Consensus        88 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~  164 (279)
T 3fdn_A           88 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR  164 (279)
T ss_dssp             ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHT---TTCEECCCCGGGEEECTTSCEEECSCCEESCC-----
T ss_pred             EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHhEEEcCCCCEEEEeccccccCCcccc
Confidence            3  1                          8899999999   99999999999999998844333333311      12


Q ss_pred             cccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHH
Q 039505          257 TTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIA  310 (342)
Q Consensus       257 ~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~  310 (342)
                      ....||+.|+|                          ||+.|+.......  ............    +......+.+++
T Consensus       165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~~li  238 (279)
T 3fdn_A          165 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE--TYKRISRVEFTF----PDFVTEGARDLI  238 (279)
T ss_dssp             ---CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH--HHHHHHHTCCCC----CTTSCHHHHHHH
T ss_pred             cccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHH--HHHHHHhCCCCC----CCcCCHHHHHHH
Confidence            33578888988                          8888876543221  000001111111    222344578899


Q ss_pred             HHcccccCCCCCCHHHHHH
Q 039505          311 MASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       311 ~~Cl~~~P~~RPsm~eV~~  329 (342)
                      .+||+.+|++|||+.|+++
T Consensus       239 ~~~l~~~p~~Rps~~e~l~  257 (279)
T 3fdn_A          239 SRLLKHNPSQRPMLREVLE  257 (279)
T ss_dssp             HHHCCSSGGGSCCHHHHHH
T ss_pred             HHHhccChhhCCCHHHHhh
Confidence            9999999999999999985

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.79  E-value=1.3e-19  Score=165.89  Aligned_cols=167  Identities=19%  Similarity=0.216  Sum_probs=107.0

Q ss_pred             cccCcCCCeeEEEEEECCC-----eEEEEEccCCCCCCCcc-------------------EE-EeeCC----cEEE--E-
Q 039505          165 RVPYKGGFITVYHGQLVKS-----EVAMKMLSPSSSQGHVP-------------------IV-ECHVG----ALIT--I-  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~-----~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~----~lv~--m-  212 (342)
                      ++||+|+||+||+|.+.++     .||+|+++........+                   ++ +|...    ++++  + 
T Consensus        27 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~  106 (298)
T 3pls_A           27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMC  106 (298)
T ss_dssp             EEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCCT
T ss_pred             ceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEeccc
Confidence            7899999999999986432     69999987543221111                   33 44322    2333  1 


Q ss_pred             --------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc----------
Q 039505          213 --------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH----------  254 (342)
Q Consensus       213 --------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~----------  254 (342)
                                                +++||+|||+   .+|+||||||+|||++++  .++.+++....          
T Consensus       107 ~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~  183 (298)
T 3pls_A          107 HGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAE---QKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQ  183 (298)
T ss_dssp             TCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCSC
T ss_pred             CCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccccc
Confidence                                      8999999999   899999999999999988  34444433211          


Q ss_pred             cccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHH
Q 039505          255 MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVE  308 (342)
Q Consensus       255 ~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~  308 (342)
                      ......||+.|+|                          ||..|+.......  .+..  .+........+......+.+
T Consensus       184 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~l~~  259 (298)
T 3pls_A          184 QHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPF--DLTH--FLAQGRRLPQPEYCPDSLYQ  259 (298)
T ss_dssp             CSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGG--GHHH--HHHTTCCCCCCTTCCHHHHH
T ss_pred             cCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHH--HHHH--HhhcCCCCCCCccchHHHHH
Confidence            1122456777887                          6444433222211  1111  00001111122233456889


Q ss_pred             HHHHcccccCCCCCCHHHHHHHHHhccCCC
Q 039505          309 IAMASVSSKVNRRPLMNQVVMVREQGNGSR  338 (342)
Q Consensus       309 l~~~Cl~~~P~~RPsm~eV~~~L~~i~~~~  338 (342)
                      ++.+||+.+|++|||+.++++.|+++....
T Consensus       260 li~~~l~~~p~~Rps~~~ll~~l~~~~~~l  289 (298)
T 3pls_A          260 VMQQCWEADPAVRPTFRVLVGEVEQIVSAL  289 (298)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             HHHHHccCChhhCcCHHHHHHHHHHHHHHH
Confidence            999999999999999999999999886543

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.79  E-value=2.4e-19  Score=165.22  Aligned_cols=117  Identities=15%  Similarity=0.200  Sum_probs=79.7

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc--------cccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH--------MSTTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~--------~~~~~~Gt~~y~a---------------  267 (342)
                      +++||+|||+   .+|+||||||+|||++.+  .++.+++....        ......||+.|+|               
T Consensus       154 i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di  230 (313)
T 1t46_A          154 VAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDV  230 (313)
T ss_dssp             HHHHHHHHHH---TTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHH
T ss_pred             HHHHHHHHHH---CCeecCCCccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHH
Confidence            7889999999   999999999999999988  34444332211        1123457778888               


Q ss_pred             -----------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhcc
Q 039505          268 -----------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       268 -----------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                                 | |+.|+.......  .+..  .+........+......+.+++.+||+.+|++|||+.|+++.|+++.
T Consensus       231 ~slG~il~ellt~g~~p~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  306 (313)
T 1t46_A          231 WSYGIFLWELFSLGSSPYPGMPVDS--KFYK--MIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI  306 (313)
T ss_dssp             HHHHHHHHHHHTTTCCSSTTCCSSH--HHHH--HHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCCcccchh--HHHH--HhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence                       7 999987654221  1111  11111111122334456889999999999999999999999998865


Q ss_pred             C
Q 039505          336 G  336 (342)
Q Consensus       336 ~  336 (342)
                      .
T Consensus       307 ~  307 (313)
T 1t46_A          307 S  307 (313)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.79  E-value=9.5e-20  Score=173.55  Aligned_cols=159  Identities=18%  Similarity=0.225  Sum_probs=105.3

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC-------cc---------------EE-EeeCC---cEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH-------VP---------------IV-ECHVG---ALI  210 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~-------~~---------------Lv-~c~~~---~lv  210 (342)
                      ++|.  ++||+|+||.||+|+...+  .||||+++.......       .+               +. ++...   ++|
T Consensus        38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv  117 (373)
T 2r5t_A           38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV  117 (373)
T ss_dssp             GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence            4566  8999999999999999765  899999865421100       00               33 33332   333


Q ss_pred             E--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc------
Q 039505          211 T--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH------  254 (342)
Q Consensus       211 ~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~------  254 (342)
                      +  +                          ++.||+|||+   .+|+||||||+|||++.+.  ++.+++....      
T Consensus       118 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~  194 (373)
T 2r5t_A          118 LDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNS  194 (373)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCC
T ss_pred             EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEeeCccccccccCCC
Confidence            3  1                          8899999999   9999999999999999884  4444332211      


Q ss_pred             cccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHH
Q 039505          255 MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVE  308 (342)
Q Consensus       255 ~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~  308 (342)
                      .....+||+.|+|                          ||+.||.......   +. ..++...+  ..+......+.+
T Consensus       195 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~---~~-~~i~~~~~--~~~~~~~~~~~~  268 (373)
T 2r5t_A          195 TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE---MY-DNILNKPL--QLKPNITNSARH  268 (373)
T ss_dssp             CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHH---HH-HHHHHSCC--CCCSSSCHHHHH
T ss_pred             ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH---HH-HHHHhccc--CCCCCCCHHHHH
Confidence            2234689999999                          8999987543221   11 11111111  112223345888


Q ss_pred             HHHHcccccCCCCCCHHHHH
Q 039505          309 IAMASVSSKVNRRPLMNQVV  328 (342)
Q Consensus       309 l~~~Cl~~~P~~RPsm~eV~  328 (342)
                      ++.+||+.+|++||++.+.+
T Consensus       269 li~~lL~~dp~~R~~~~~~~  288 (373)
T 2r5t_A          269 LLEGLLQKDRTKRLGAKDDF  288 (373)
T ss_dssp             HHHHHTCSSGGGSTTTTTTH
T ss_pred             HHHHHcccCHHhCCCCCCCH
Confidence            99999999999999985433

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.79  E-value=1.2e-19  Score=164.51  Aligned_cols=159  Identities=16%  Similarity=0.195  Sum_probs=102.0

Q ss_pred             hhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc---------------------EE-EeeCC---cEE
Q 039505          160 TNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP---------------------IV-ECHVG---ALI  210 (342)
Q Consensus       160 t~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~---------------------Lv-~c~~~---~lv  210 (342)
                      +++|.  +.||+|+||+||+|....+  .||||+++.........                     ++ ++...   ++|
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv   89 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ   89 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred             cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence            45666  8999999999999999744  99999998653322111                     33 33333   333


Q ss_pred             E--E------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC---------------
Q 039505          211 T--I------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK---------------  243 (342)
Q Consensus       211 ~--m------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~---------------  243 (342)
                      +  +                              +++||+|||+   .+|+||||||+|||++.+               
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~  166 (289)
T 1x8b_A           90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDW  166 (289)
T ss_dssp             EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEC-----------------
T ss_pred             EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence            3  1                              8999999999   999999999999999843               


Q ss_pred             ------CccccCCCCCcc--ccccccCcceee---------------------------cCCCCcccccccccccccccc
Q 039505          244 ------SRISPVEGGTHM--STTIAGTAGFLN---------------------------TKNPVISKSIENGNSHLRDKS  288 (342)
Q Consensus       244 ------a~~~~~~~~~~~--~~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~~~~l~~~~  288 (342)
                            .++.+++.....  .....||+.|+|                           +|++|+......       ..
T Consensus       167 ~~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~-------~~  239 (289)
T 1x8b_A          167 ASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQW-------HE  239 (289)
T ss_dssp             ---CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHH-------HH
T ss_pred             cCCceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHH-------HH
Confidence                  234443332211  123568899988                           444433221100       00


Q ss_pred             cccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          289 TVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       289 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      +..... ...+......+.+++.+||+.+|++|||+.|+++
T Consensus       240 ~~~~~~-~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  279 (289)
T 1x8b_A          240 IRQGRL-PRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK  279 (289)
T ss_dssp             HHTTCC-CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHcCCC-CCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence            111111 1122233455889999999999999999999975

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.79  E-value=3.5e-20  Score=171.73  Aligned_cols=170  Identities=14%  Similarity=0.179  Sum_probs=112.9

Q ss_pred             HhhccC--cccCcCCCeeEEEEEECC------C-eEEEEEccCCCCCCCc-----c--------------EE-EeeCC--
Q 039505          159 VTNNFE--RVPYKGGFITVYHGQLVK------S-EVAMKMLSPSSSQGHV-----P--------------IV-ECHVG--  207 (342)
Q Consensus       159 at~~f~--~~lG~G~fG~Vykg~~~~------~-~vAVK~l~~~~~~~~~-----~--------------Lv-~c~~~--  207 (342)
                      ..++|.  +.||+|+||.||+|.+..      + .||||++.........     +              ++ ++..+  
T Consensus        23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~  102 (322)
T 1p4o_A           23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP  102 (322)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSS
T ss_pred             hhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCc
Confidence            445566  899999999999998752      3 8999999754321111     1              33 44333  


Q ss_pred             -cEEE--E------------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--Ccc
Q 039505          208 -ALIT--I------------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRI  246 (342)
Q Consensus       208 -~lv~--m------------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~  246 (342)
                       ++|+  +                                    +++||+|||+   .+|+||||||+|||++.+  .++
T Consensus       103 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~NIli~~~~~~kl  179 (322)
T 1p4o_A          103 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKI  179 (322)
T ss_dssp             CEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEECTTCCEEE
T ss_pred             cEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCCccCCCccceEEEcCCCeEEE
Confidence             3333  1                                    7889999999   899999999999999988  444


Q ss_pred             ccCCCCCcc--------ccccccCcceee--------------------------c-CCCCccccccccccccccccccc
Q 039505          247 SPVEGGTHM--------STTIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVD  291 (342)
Q Consensus       247 ~~~~~~~~~--------~~~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d  291 (342)
                      .+++.....        .....||+.|+|                          | |+.|+.......   +. ..+..
T Consensus       180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---~~-~~~~~  255 (322)
T 1p4o_A          180 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ---VL-RFVME  255 (322)
T ss_dssp             CCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHH---HH-HHHHT
T ss_pred             CcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHH---HH-HHHHc
Confidence            444433211        122456788888                          6 788887543221   00 01111


Q ss_pred             ccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccC
Q 039505          292 LSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNG  336 (342)
Q Consensus       292 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~  336 (342)
                      ... ...+......+.+++.+||+.+|++|||+.|+++.|+++..
T Consensus       256 ~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~  299 (322)
T 1p4o_A          256 GGL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  299 (322)
T ss_dssp             TCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             CCc-CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence            111 11223344568899999999999999999999999988744

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.79  E-value=4e-19  Score=164.80  Aligned_cols=167  Identities=14%  Similarity=0.113  Sum_probs=111.0

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc-------------------EE-EeeCC-----cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP-------------------IV-ECHVG-----ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~-----~lv~--m---  212 (342)
                      ++||+|+||+||+|+...+  .||||+++........+                   ++ ++...     ++|+  +   
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~   94 (319)
T 4euu_A           15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCG   94 (319)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTTC
T ss_pred             EEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCCC
Confidence            8999999999999999764  99999987543221111                   33 33322     3343  1   


Q ss_pred             --------------------------ehhhhhhhhccCCCCeeeCCCCcceEEe----cCC--CccccCCCCCc-----c
Q 039505          213 --------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILL----NEK--SRISPVEGGTH-----M  255 (342)
Q Consensus       213 --------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILL----d~~--a~~~~~~~~~~-----~  255 (342)
                                                +++||+|||+   .+|+||||||+|||+    +.+  .++.+++....     .
T Consensus        95 ~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~~  171 (319)
T 4euu_A           95 SLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ  171 (319)
T ss_dssp             BHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTCC
T ss_pred             CHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCCc
Confidence                                      8899999999   999999999999998    555  45555543321     1


Q ss_pred             ccccccCcceee----------------------------------cCCCCcccccccc-cccccc---cc---------
Q 039505          256 STTIAGTAGFLN----------------------------------TKNPVISKSIENG-NSHLRD---KS---------  288 (342)
Q Consensus       256 ~~~~~Gt~~y~a----------------------------------tG~~P~~~~~~~~-~~~l~~---~~---------  288 (342)
                      .....||+.|+|                                  ||+.||....... ...+..   ..         
T Consensus       172 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~  251 (319)
T 4euu_A          172 FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGV  251 (319)
T ss_dssp             BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEE
T ss_pred             eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhh
Confidence            123568888876                                  8888886433211 000000   00         


Q ss_pred             ------c--ccccC--CCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhc
Q 039505          289 ------T--VDLSF--KGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQG  334 (342)
Q Consensus       289 ------~--~d~~l--~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i  334 (342)
                            .  .++.+  ...........+.+++.+||+.||++|||+.|+++...+.
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~  307 (319)
T 4euu_A          252 QKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI  307 (319)
T ss_dssp             ECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred             hcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence                  0  00011  1223456677789999999999999999999999887764

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.79  E-value=1.5e-19  Score=168.42  Aligned_cols=168  Identities=17%  Similarity=0.216  Sum_probs=103.3

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC-----cc--------------EE-EeeCC---cEEE--E-----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH-----VP--------------IV-ECHVG---ALIT--I-----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~-----~~--------------Lv-~c~~~---~lv~--m-----  212 (342)
                      +.||+|+||+||+|+...+  .||||++........     ++              ++ ++...   ++|+  +     
T Consensus         8 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~   87 (324)
T 3mtl_A            8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLK   87 (324)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCSEEHH
T ss_pred             EEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccccCHH
Confidence            7899999999999998744  999999875432211     11              44 44444   4444  2     


Q ss_pred             ---------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCccccCCCCCc--------cccccccCc
Q 039505          213 ---------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH--------MSTTIAGTA  263 (342)
Q Consensus       213 ---------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~~~~~~~~~~--------~~~~~~Gt~  263 (342)
                                           +++||+|||+   .+|+||||||+|||++.+..+...+++..        ......||+
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~  164 (324)
T 3mtl_A           88 QYLDDCGNIINMHNVKLFLFQLLRGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTL  164 (324)
T ss_dssp             HHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCCGGGEEECTTCCEEECSSSEEECC------------CG
T ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCcCHHHEEECCCCCEEEccCcccccccCCccccccccCcc
Confidence                                 8899999999   99999999999999998843333333321        122346788


Q ss_pred             ceee---------------------------cCCCCcccccccc-cccccc--ccccc-----------------ccCCC
Q 039505          264 GFLN---------------------------TKNPVISKSIENG-NSHLRD--KSTVD-----------------LSFKG  296 (342)
Q Consensus       264 ~y~a---------------------------tG~~P~~~~~~~~-~~~l~~--~~~~d-----------------~~l~~  296 (342)
                      .|+|                           ||+.||....... ...+..  ....+                 +....
T Consensus       165 ~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (324)
T 3mtl_A          165 WYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRA  244 (324)
T ss_dssp             GGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCC
T ss_pred             cccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccc
Confidence            8888                           8888887643221 000000  00000                 00000


Q ss_pred             C----CChHHHHHHHHHHHHcccccCCCCCCHHHHHH--HHHhcc
Q 039505          297 E----FDIISVGKAVEIAMASVSSKVNRRPLMNQVVM--VREQGN  335 (342)
Q Consensus       297 ~----~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~--~L~~i~  335 (342)
                      .    ........+.+++.+||+.||++|||+.|+++  .+..+.
T Consensus       245 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  289 (324)
T 3mtl_A          245 EALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLG  289 (324)
T ss_dssp             CCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGC
T ss_pred             hhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcc
Confidence            0    01112345789999999999999999999985  354443

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.79  E-value=6e-20  Score=175.75  Aligned_cols=164  Identities=16%  Similarity=0.191  Sum_probs=108.7

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc----c--------------EE-EeeCC---cEEE--E
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV----P--------------IV-ECHVG---ALIT--I  212 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~----~--------------Lv-~c~~~---~lv~--m  212 (342)
                      +.|.  +.||+|+||+||+|....+  .||+|++.........    +              ++ ++...   ++|+  +
T Consensus        51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~  130 (387)
T 1kob_A           51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL  130 (387)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcC
Confidence            4555  8999999999999998754  8999998754311110    1              33 44333   3333  1


Q ss_pred             ---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC----CccccCCCCCcc-----c
Q 039505          213 ---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK----SRISPVEGGTHM-----S  256 (342)
Q Consensus       213 ---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~----a~~~~~~~~~~~-----~  256 (342)
                                                 +++||+|||+   .+|+||||||+|||++.+    .++.+++.....     .
T Consensus       131 ~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~  207 (387)
T 1kob_A          131 SGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV  207 (387)
T ss_dssp             CCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred             CCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccchHHeEEecCCCCceEEEecccceecCCCcce
Confidence                                       8999999999   999999999999999854    445554433221     1


Q ss_pred             cccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHH
Q 039505          257 TTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIA  310 (342)
Q Consensus       257 ~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~  310 (342)
                      ....||+.|+|                          ||+.||.......  .+......+..............+.+++
T Consensus       208 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~--~~~~i~~~~~~~~~~~~~~~s~~~~~li  285 (387)
T 1kob_A          208 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE--TLQNVKRCDWEFDEDAFSSVSPEAKDFI  285 (387)
T ss_dssp             EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH--HHHHHHHCCCCCCSSTTTTSCHHHHHHH
T ss_pred             eeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHH--HHHHHHhCCCCCCccccccCCHHHHHHH
Confidence            23579999998                          8999987654221  1100000011111111223345588999


Q ss_pred             HHcccccCCCCCCHHHHHH
Q 039505          311 MASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       311 ~~Cl~~~P~~RPsm~eV~~  329 (342)
                      .+||+.+|++|||+.|+++
T Consensus       286 ~~~L~~dP~~Rpt~~ell~  304 (387)
T 1kob_A          286 KNLLQKEPRKRLTVHDALE  304 (387)
T ss_dssp             HTTSCSSGGGSCCHHHHHT
T ss_pred             HHHcCCChhHCcCHHHHhh
Confidence            9999999999999999986

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.79  E-value=9.9e-20  Score=168.92  Aligned_cols=168  Identities=20%  Similarity=0.204  Sum_probs=103.7

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC-----eEEEEEccCCCCCCCcc--------------------EE-EeeCC-----
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS-----EVAMKMLSPSSSQGHVP--------------------IV-ECHVG-----  207 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~-----~vAVK~l~~~~~~~~~~--------------------Lv-~c~~~-----  207 (342)
                      ++|.  +.||+|+||+||+|++...     .||||+++.........                    ++ ++...     
T Consensus        23 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  102 (323)
T 3qup_A           23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGR  102 (323)
T ss_dssp             --CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-----
T ss_pred             hHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccC
Confidence            4455  8999999999999987543     69999997643221110                    22 22221     


Q ss_pred             ----cEEE--E--------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--Cccc
Q 039505          208 ----ALIT--I--------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRIS  247 (342)
Q Consensus       208 ----~lv~--m--------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~  247 (342)
                          ++++  +                                +++||+|||+   .+|+||||||+|||++++  .++.
T Consensus       103 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~Dikp~NIli~~~~~~kl~  179 (323)
T 3qup_A          103 LPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMTVCVA  179 (323)
T ss_dssp             --CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEEC
T ss_pred             CCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHc---CCcccCCCCcceEEEcCCCCEEEe
Confidence                1121  1                                8899999999   999999999999999988  4444


Q ss_pred             cCCCCCc--------cccccccCcceee--------------------------c-CCCCcccccccccccccccccccc
Q 039505          248 PVEGGTH--------MSTTIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDL  292 (342)
Q Consensus       248 ~~~~~~~--------~~~~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~  292 (342)
                      +++....        ......+++.|+|                          | |+.|+.......   +.. .+...
T Consensus       180 Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~~~-~~~~~  255 (323)
T 3qup_A          180 DFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE---IYN-YLIGG  255 (323)
T ss_dssp             CCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHH-HHHTT
T ss_pred             eccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH---HHH-HHhcC
Confidence            4433211        1122456777887                          7 899987654322   111 01110


Q ss_pred             cCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccC
Q 039505          293 SFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNG  336 (342)
Q Consensus       293 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~  336 (342)
                      . ....+......+.+++.+||+.+|++|||+.++++.|+++..
T Consensus       256 ~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~  298 (323)
T 3qup_A          256 N-RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILG  298 (323)
T ss_dssp             C-CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             C-CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            0 111223344568899999999999999999999999998754

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.79  E-value=3.2e-19  Score=164.93  Aligned_cols=165  Identities=19%  Similarity=0.244  Sum_probs=103.8

Q ss_pred             cccCcCCCeeEEEEEECCCeEEEEEccCCCCCCC------cc--------------EE-EeeCC---cEEE--E------
Q 039505          165 RVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGH------VP--------------IV-ECHVG---ALIT--I------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~~vAVK~l~~~~~~~~------~~--------------Lv-~c~~~---~lv~--m------  212 (342)
                      +.||+|+||.||+|.+.+ .||||+++.......      ++              ++ +|...   ++++  +      
T Consensus        39 ~~lg~G~~g~V~~~~~~~-~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~  117 (319)
T 2y4i_B           39 ELIGKGRFGQVYHGRWHG-EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLY  117 (319)
T ss_dssp             CBCCCSSSSEEEEEEESS-SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSEEHH
T ss_pred             eEeccCCceEEEEEEEcC-eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCCcHH
Confidence            899999999999999865 699999875432111      11              22 34333   3332  1      


Q ss_pred             ---------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-CccccCCCCCc-----------ccccc
Q 039505          213 ---------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-SRISPVEGGTH-----------MSTTI  259 (342)
Q Consensus       213 ---------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-a~~~~~~~~~~-----------~~~~~  259 (342)
                                           +++||+|||+   .+|+||||||+|||++++ .++.+++....           .....
T Consensus       118 ~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~NIl~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~  194 (319)
T 2y4i_B          118 SVVRDAKIVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYDNGKVVITDFGLFSISGVLQAGRREDKLRIQ  194 (319)
T ss_dssp             HHTTSSCCCCCSHHHHHHHHHHHHHHHHHHH---TTCCCCCCCSTTEEEC--CCEECCCSCCC----------CCSCBCC
T ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChhhEEEeCCCEEEeecCCccccccccccccccccccC
Confidence                                 8999999999   899999999999999965 55555443211           11223


Q ss_pred             ccCcceee-----------------------------------cCCCCcccccccccccccc-cccccccCCCCCChHHH
Q 039505          260 AGTAGFLN-----------------------------------TKNPVISKSIENGNSHLRD-KSTVDLSFKGEFDIISV  303 (342)
Q Consensus       260 ~Gt~~y~a-----------------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~l~~~~~~~~~  303 (342)
                      .||+.|+|                                   ||+.|+.......  .... .....+...   .....
T Consensus       195 ~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~~~~~~~~~~~~~---~~~~~  269 (319)
T 2y4i_B          195 NGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEA--IIWQMGTGMKPNLS---QIGMG  269 (319)
T ss_dssp             SGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHH--HHHHHHTTCCCCCC---CSSCC
T ss_pred             CCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHhccCCCCCCC---cCCCC
Confidence            57777776                                   6666665432211  0000 011111111   11223


Q ss_pred             HHHHHHHHHcccccCCCCCCHHHHHHHHHhccCCC
Q 039505          304 GKAVEIAMASVSSKVNRRPLMNQVVMVREQGNGSR  338 (342)
Q Consensus       304 ~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~~~  338 (342)
                      ..+.+++..||+.+|++|||+.++++.|+.+.+..
T Consensus       270 ~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~  304 (319)
T 2y4i_B          270 KEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN  304 (319)
T ss_dssp             TTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred             HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence            34788999999999999999999999999987643

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.79  E-value=2.7e-20  Score=175.40  Aligned_cols=81  Identities=25%  Similarity=0.284  Sum_probs=59.3

Q ss_pred             HhhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC------------------cc----EE-EeeCC---c
Q 039505          159 VTNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH------------------VP----IV-ECHVG---A  208 (342)
Q Consensus       159 at~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~------------------~~----Lv-~c~~~---~  208 (342)
                      ..++|.  +.||+|+||+||+|+...+  .||||+++.......                  ..    ++ ++...   +
T Consensus        33 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~  112 (360)
T 3llt_A           33 LNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMC  112 (360)
T ss_dssp             ETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEE
T ss_pred             ecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeE
Confidence            456676  8999999999999998654  899999864211000                  00    33 33322   3


Q ss_pred             EEE--E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecC
Q 039505          209 LIT--I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNE  242 (342)
Q Consensus       209 lv~--m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~  242 (342)
                      +|+  +                           ++.||+|||+   .+|+||||||+|||++.
T Consensus       113 lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~  172 (360)
T 3llt_A          113 LIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRK---MSLTHTDLKPENILLDD  172 (360)
T ss_dssp             EEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESC
T ss_pred             EEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCcccEEEcc
Confidence            443  1                           8999999999   99999999999999975

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.79  E-value=3.6e-20  Score=178.62  Aligned_cols=169  Identities=19%  Similarity=0.207  Sum_probs=111.5

Q ss_pred             HHHHHhhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCC----CC--CC-cc--------------EE-EeeCC-
Q 039505          155 LSLRVTNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSS----SQ--GH-VP--------------IV-ECHVG-  207 (342)
Q Consensus       155 ~l~~at~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~----~~--~~-~~--------------Lv-~c~~~-  207 (342)
                      ++....++|.  ++||+|+||+||+|+...+  .||||+++...    ..  .. .+              ++ +|... 
T Consensus        63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~  142 (410)
T 3v8s_A           63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR  142 (410)
T ss_dssp             HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC
Confidence            3444556777  8999999999999999765  89999986421    11  00 11              44 44444 


Q ss_pred             --cEEE--E-------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc--
Q 039505          208 --ALIT--I-------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH--  254 (342)
Q Consensus       208 --~lv~--m-------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~--  254 (342)
                        ++|+  +                         ++.||+|||+   .+|+||||||+|||++.+.  ++.+++....  
T Consensus       143 ~~~lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~  219 (410)
T 3v8s_A          143 YLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN  219 (410)
T ss_dssp             EEEEEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeeECCCCCEEEeccceeEeec
Confidence              4444  2                         8899999999   9999999999999999884  4444443211  


Q ss_pred             -----cccccccCcceee------------------------------cCCCCcccccccc-cccccccccccccCCCCC
Q 039505          255 -----MSTTIAGTAGFLN------------------------------TKNPVISKSIENG-NSHLRDKSTVDLSFKGEF  298 (342)
Q Consensus       255 -----~~~~~~Gt~~y~a------------------------------tG~~P~~~~~~~~-~~~l~~~~~~d~~l~~~~  298 (342)
                           .....+||+.|+|                              ||+.||....... ...+.. .......+  .
T Consensus       220 ~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~-~~~~~~~p--~  296 (410)
T 3v8s_A          220 KEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMN-HKNSLTFP--D  296 (410)
T ss_dssp             TTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT-HHHHCCCC--T
T ss_pred             cCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHh-ccccccCC--C
Confidence                 1234689999998                              8888887543221 001111 00001111  1


Q ss_pred             ChHHHHHHHHHHHHcccccCCC--CCCHHHHHH
Q 039505          299 DIISVGKAVEIAMASVSSKVNR--RPLMNQVVM  329 (342)
Q Consensus       299 ~~~~~~~l~~l~~~Cl~~~P~~--RPsm~eV~~  329 (342)
                      .......+.+++.+|++.+|++  ||++.||++
T Consensus       297 ~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~  329 (410)
T 3v8s_A          297 DNDISKEAKNLICAFLTDREVRLGRNGVEEIKR  329 (410)
T ss_dssp             TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred             cccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence            1123345888999999999988  999999985

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.79  E-value=1.8e-19  Score=167.42  Aligned_cols=164  Identities=19%  Similarity=0.248  Sum_probs=107.6

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc----------c--------------EE-EeeCC---c
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV----------P--------------IV-ECHVG---A  208 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~----------~--------------Lv-~c~~~---~  208 (342)
                      +.|.  +.||+|+||.||+|+...+  .||||+++........          +              ++ ++...   +
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   91 (321)
T 2a2a_A           12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV   91 (321)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence            4455  8999999999999998754  9999999765432211          1              33 44433   3


Q ss_pred             EEE--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC------ccccCCCCCc
Q 039505          209 LIT--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS------RISPVEGGTH  254 (342)
Q Consensus       209 lv~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a------~~~~~~~~~~  254 (342)
                      +|+  +                          +++||+|||+   .+|+||||||+|||++.+.      ++.+++....
T Consensus        92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~  168 (321)
T 2a2a_A           92 LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE  168 (321)
T ss_dssp             EEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEE
T ss_pred             EEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChHHEEEecCCCCcCCEEEccCcccee
Confidence            333  1                          8999999999   9999999999999998773      3444332211


Q ss_pred             -----cccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHH
Q 039505          255 -----MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISV  303 (342)
Q Consensus       255 -----~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~  303 (342)
                           ......||+.|+|                          ||+.|+.......  .+...................
T Consensus       169 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~i~~~~~~~~~~~~~~~~  246 (321)
T 2a2a_A          169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE--TLANITSVSYDFDEEFFSHTS  246 (321)
T ss_dssp             CCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH--HHHHHHTTCCCCCHHHHTTCC
T ss_pred             cCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHH--HHHHHHhcccccChhhhcccC
Confidence                 1133568999998                          8888887543221  000000000001000011223


Q ss_pred             HHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          304 GKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       304 ~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ..+.+++.+||+.+|++|||+.|+++
T Consensus       247 ~~~~~li~~~l~~dp~~Rps~~e~l~  272 (321)
T 2a2a_A          247 ELAKDFIRKLLVKETRKRLTIQEALR  272 (321)
T ss_dssp             HHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            45889999999999999999999986

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.79  E-value=2.2e-19  Score=167.31  Aligned_cols=168  Identities=18%  Similarity=0.256  Sum_probs=110.7

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC-------eEEEEEccCCCCCCCcc--------------------EE-EeeCC---
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS-------EVAMKMLSPSSSQGHVP--------------------IV-ECHVG---  207 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~-------~vAVK~l~~~~~~~~~~--------------------Lv-~c~~~---  207 (342)
                      ++|.  +.||+|+||+||+|.....       .||||++.........+                    ++ +|..+   
T Consensus        46 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~  125 (333)
T 2i1m_A           46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPV  125 (333)
T ss_dssp             TSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCce
Confidence            3454  8999999999999997532       69999997653211111                    33 44332   


Q ss_pred             cEEE--E----------------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--
Q 039505          208 ALIT--I----------------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--  243 (342)
Q Consensus       208 ~lv~--m----------------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--  243 (342)
                      ++|+  +                                        +++||+|||+   .+|+||||||+|||++.+  
T Consensus       126 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~  202 (333)
T 2i1m_A          126 LVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGHV  202 (333)
T ss_dssp             EEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGCEEEGGGE
T ss_pred             EEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCcccceEEECCCCe
Confidence            3333  1                                        7889999999   899999999999999987  


Q ss_pred             CccccCCCCCc--------cccccccCcceee--------------------------c-CCCCcccccccccccccccc
Q 039505          244 SRISPVEGGTH--------MSTTIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKS  288 (342)
Q Consensus       244 a~~~~~~~~~~--------~~~~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~  288 (342)
                      .++.+++....        ......||+.|+|                          | |+.|+.......  .+.  .
T Consensus       203 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~~~--~  278 (333)
T 2i1m_A          203 AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS--KFY--K  278 (333)
T ss_dssp             EEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH--HHH--H
T ss_pred             EEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH--HHH--H
Confidence            34444332211        1123457778888                          6 888887643221  111  1


Q ss_pred             cccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhcc
Q 039505          289 TVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       289 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                      .+........+......+.+++..||+.+|++|||+.|+++.|+++.
T Consensus       279 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~  325 (333)
T 2i1m_A          279 LVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA  325 (333)
T ss_dssp             HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence            11111111122223456889999999999999999999999998764

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.79  E-value=7.6e-20  Score=169.78  Aligned_cols=170  Identities=15%  Similarity=0.140  Sum_probs=112.0

Q ss_pred             cccCcCCCeeEEEEEEC-----CC-eEEEEEccCCCCCCCc-----c--------------EE-EeeCC-----cEEE--
Q 039505          165 RVPYKGGFITVYHGQLV-----KS-EVAMKMLSPSSSQGHV-----P--------------IV-ECHVG-----ALIT--  211 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~-----~~-~vAVK~l~~~~~~~~~-----~--------------Lv-~c~~~-----~lv~--  211 (342)
                      +.||+|+||+||++.+.     ++ .||||+++........     +              ++ +|...     ++|+  
T Consensus        37 ~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~  116 (318)
T 3lxp_A           37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEY  116 (318)
T ss_dssp             EEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEECC
T ss_pred             heecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEEec
Confidence            88999999999998763     33 8999999765321111     1              44 44431     3444  


Q ss_pred             E-------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc---------c
Q 039505          212 I-------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH---------M  255 (342)
Q Consensus       212 m-------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~---------~  255 (342)
                      +                         +++||+|||+   .+|+||||||+|||++.+.  ++.+++....         .
T Consensus       117 ~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~  193 (318)
T 3lxp_A          117 VPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV  193 (318)
T ss_dssp             CTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEEEC
T ss_pred             ccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEEcCCCCEEECCcccccccccccccccc
Confidence            1                         8899999999   9999999999999999884  3433332211         1


Q ss_pred             ccccccCcceee--------------------------cCCCCccccccccc--ccccc--------cccccccCCCCCC
Q 039505          256 STTIAGTAGFLN--------------------------TKNPVISKSIENGN--SHLRD--------KSTVDLSFKGEFD  299 (342)
Q Consensus       256 ~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~--~~l~~--------~~~~d~~l~~~~~  299 (342)
                      .....||..|+|                          ||+.|+........  ..+..        .+.++.......+
T Consensus       194 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (318)
T 3lxp_A          194 REDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRP  273 (318)
T ss_dssp             ---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCCC
T ss_pred             ccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCCCCC
Confidence            123457777888                          99999875432110  00000        1122222222233


Q ss_pred             hHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccCC
Q 039505          300 IISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNGS  337 (342)
Q Consensus       300 ~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~~  337 (342)
                      ......+.+++.+||+.+|++|||+.|+++.|+.+.+.
T Consensus       274 ~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~  311 (318)
T 3lxp_A          274 DKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEK  311 (318)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHh
Confidence            44556789999999999999999999999999987653

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.79  E-value=6.8e-20  Score=167.10  Aligned_cols=164  Identities=12%  Similarity=0.171  Sum_probs=104.9

Q ss_pred             cccCcCCCeeEEEEEECCC---------eEEEEEccCCCCCCCcc------------------EE-EeeCC---cEEE--
Q 039505          165 RVPYKGGFITVYHGQLVKS---------EVAMKMLSPSSSQGHVP------------------IV-ECHVG---ALIT--  211 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~---------~vAVK~l~~~~~~~~~~------------------Lv-~c~~~---~lv~--  211 (342)
                      +.||+|+||+||+|.....         .||+|++........+.                  ++ +|..+   ++|+  
T Consensus        14 ~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   93 (289)
T 4fvq_A           14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEF   93 (289)
T ss_dssp             EEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred             eeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEEEC
Confidence            8999999999999987642         59999986543221111                  34 44443   4444  


Q ss_pred             E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC----------ccccCCCCCc
Q 039505          212 I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS----------RISPVEGGTH  254 (342)
Q Consensus       212 m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a----------~~~~~~~~~~  254 (342)
                      +                           +++||+|||+   .+|+||||||+|||++.+.          ++.+++....
T Consensus        94 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~  170 (289)
T 4fvq_A           94 VKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEE---NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISIT  170 (289)
T ss_dssp             CTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTT
T ss_pred             CCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhh---CCeECCCcCcceEEEecCCcccccccceeeeccCccccc
Confidence            1                           8999999999   9999999999999998773          3333333221


Q ss_pred             c--ccccccCcceee---------------------------cCC-CCcccccccccccccccccccccCCCCCChHHHH
Q 039505          255 M--STTIAGTAGFLN---------------------------TKN-PVISKSIENGNSHLRDKSTVDLSFKGEFDIISVG  304 (342)
Q Consensus       255 ~--~~~~~Gt~~y~a---------------------------tG~-~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~  304 (342)
                      .  .....||+.|+|                           ||. +|+.......   ........+.+...    ...
T Consensus       171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~----~~~  243 (289)
T 4fvq_A          171 VLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR---KLQFYEDRHQLPAP----KAA  243 (289)
T ss_dssp             TSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH---HHHHHHTTCCCCCC----SSC
T ss_pred             ccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHH---HHHHhhccCCCCCC----CCH
Confidence            1  123568888888                           643 3433322111   00000001111111    123


Q ss_pred             HHHHHHHHcccccCCCCCCHHHHHHHHHhccCCC
Q 039505          305 KAVEIAMASVSSKVNRRPLMNQVVMVREQGNGSR  338 (342)
Q Consensus       305 ~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~~~  338 (342)
                      .+.+++.+||+.+|++|||+.|+++.|+++....
T Consensus       244 ~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~  277 (289)
T 4fvq_A          244 ELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPD  277 (289)
T ss_dssp             TTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC---
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence            4788999999999999999999999999986543

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.79  E-value=9.2e-20  Score=169.99  Aligned_cols=160  Identities=21%  Similarity=0.219  Sum_probs=105.0

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc---------------------EE-EeeCC---cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP---------------------IV-ECHVG---ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~---------------------Lv-~c~~~---~lv~--m---  212 (342)
                      +.||+|+||+||+|....+  .||||+++.........                     ++ ++...   ++|+  +   
T Consensus        35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~  114 (327)
T 3lm5_A           35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGG  114 (327)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred             ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCC
Confidence            7899999999999998754  99999987643221100                     33 44333   3333  1   


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecC---C--CccccCCCCCc-----ccc
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNE---K--SRISPVEGGTH-----MST  257 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~---~--a~~~~~~~~~~-----~~~  257 (342)
                                               ++.||+|||+   .+|+||||||+|||++.   +  .++.+++....     ...
T Consensus       115 ~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~---~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~  191 (327)
T 3lm5_A          115 EIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELR  191 (327)
T ss_dssp             EGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC-------
T ss_pred             cHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCccccc
Confidence                                     8899999999   99999999999999997   3  34444433211     113


Q ss_pred             ccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHH
Q 039505          258 TIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAM  311 (342)
Q Consensus       258 ~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~  311 (342)
                      ...||+.|+|                          ||+.|+.......  .......................+.+++.
T Consensus       192 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~li~  269 (327)
T 3lm5_A          192 EIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE--TYLNISQVNVDYSEETFSSVSQLATDFIQ  269 (327)
T ss_dssp             --CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHTCCCCCTTTTTTSCHHHHHHHH
T ss_pred             cccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH--HHHHHHhcccccCchhhcccCHHHHHHHH
Confidence            3579999998                          8888887654322  11110011111112222234456889999


Q ss_pred             HcccccCCCCCCHHHHHH
Q 039505          312 ASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       312 ~Cl~~~P~~RPsm~eV~~  329 (342)
                      +||+.+|++|||+.|+++
T Consensus       270 ~~L~~dP~~Rpt~~~ll~  287 (327)
T 3lm5_A          270 SLLVKNPEKRPTAEICLS  287 (327)
T ss_dssp             HHSCSSGGGSCCHHHHTT
T ss_pred             HHcCCChhhCcCHHHHhC
Confidence            999999999999999975

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.79  E-value=2e-19  Score=169.01  Aligned_cols=166  Identities=17%  Similarity=0.240  Sum_probs=106.1

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc------c--------------EE-EeeC---------
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV------P--------------IV-ECHV---------  206 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~------~--------------Lv-~c~~---------  206 (342)
                      ++|.  +.||+|+||+||+|+...+  .||||++.........      +              ++ +|..         
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   96 (351)
T 3mi9_A           17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   96 (351)
T ss_dssp             GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred             cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence            3455  8999999999999998644  9999998665433211      1              44 4432         


Q ss_pred             C--cEEE--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc
Q 039505          207 G--ALIT--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH  254 (342)
Q Consensus       207 ~--~lv~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~  254 (342)
                      +  ++|+  +                          +++||+|||+   .+|+||||||+|||++.+  .++.+++....
T Consensus        97 ~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~  173 (351)
T 3mi9_A           97 GSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARA  173 (351)
T ss_dssp             CEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             ceEEEEEeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCCEEEccchhccc
Confidence            1  3444  1                          8899999999   999999999999999988  44444432211


Q ss_pred             ----------cccccccCcceee---------------------------cCCCCccccccccc-ccccc-cccccccCC
Q 039505          255 ----------MSTTIAGTAGFLN---------------------------TKNPVISKSIENGN-SHLRD-KSTVDLSFK  295 (342)
Q Consensus       255 ----------~~~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~~-~~l~~-~~~~d~~l~  295 (342)
                                ......||++|+|                           ||+.|+........ ..+.. .....+...
T Consensus       174 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  253 (351)
T 3mi9_A          174 FSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW  253 (351)
T ss_dssp             CCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTS
T ss_pred             ccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhc
Confidence                      1133568999998                           88888775432210 00000 000000000


Q ss_pred             C-----------------CCC-hHH------HHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          296 G-----------------EFD-IIS------VGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       296 ~-----------------~~~-~~~------~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      .                 ... .+.      ...+.+++.+||+.||++|||+.|+++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  311 (351)
T 3mi9_A          254 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN  311 (351)
T ss_dssp             TTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence            0                 000 011      234789999999999999999999985

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.79  E-value=1.7e-19  Score=167.43  Aligned_cols=166  Identities=18%  Similarity=0.251  Sum_probs=97.8

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc-------------------EE-EeeCC---cEEE--
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP-------------------IV-ECHVG---ALIT--  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~---~lv~--  211 (342)
                      ++|.  +.||+|+||+||+|....+  .||||+++........+                   ++ ++..+   ++|+  
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   84 (317)
T 2pmi_A            5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEF   84 (317)
T ss_dssp             --------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEEC
T ss_pred             cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEe
Confidence            3455  8999999999999998754  99999997654332211                   33 43333   3333  


Q ss_pred             E-------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc----
Q 039505          212 I-------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH----  254 (342)
Q Consensus       212 m-------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~----  254 (342)
                      +                               +++||+|||+   .+|+||||||+|||++.+  .++.+++....    
T Consensus        85 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~  161 (317)
T 2pmi_A           85 MDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIP  161 (317)
T ss_dssp             CCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCSSCEETTSC
T ss_pred             cCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCChHHeEEcCCCCEEECcCccceecCCC
Confidence            1                               7899999999   999999999999999988  44444433211    


Q ss_pred             --cccccccCcceee---------------------------cCCCCcccccccc-cccccc---------------ccc
Q 039505          255 --MSTTIAGTAGFLN---------------------------TKNPVISKSIENG-NSHLRD---------------KST  289 (342)
Q Consensus       255 --~~~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~-~~~l~~---------------~~~  289 (342)
                        ......||+.|+|                           ||+.||....... ...+..               ...
T Consensus       162 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  241 (317)
T 2pmi_A          162 VNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPK  241 (317)
T ss_dssp             CCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTT
T ss_pred             cccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhh
Confidence              1123568888988                           8998887543221 000000               000


Q ss_pred             ccccCCCC------------CChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          290 VDLSFKGE------------FDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       290 ~d~~l~~~------------~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ..+.+...            ........+.+++.+||+.||++|||+.|+++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~  293 (317)
T 2pmi_A          242 YNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH  293 (317)
T ss_dssp             CCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             cccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence            00001000            00112346889999999999999999999975

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.79  E-value=1.8e-19  Score=164.56  Aligned_cols=162  Identities=22%  Similarity=0.224  Sum_probs=105.8

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc-------------------EE-EeeCC---cEEE--
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP-------------------IV-ECHVG---ALIT--  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~---~lv~--  211 (342)
                      +.|.  +.||+|+||+||+|....+  .||+|++.........+                   ++ +|...   ++|+  
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  101 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET  101 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence            3455  8999999999999998754  99999987654332211                   34 44443   3333  


Q ss_pred             E------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-----CccccCCCCCc--
Q 039505          212 I------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-----SRISPVEGGTH--  254 (342)
Q Consensus       212 m------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-----a~~~~~~~~~~--  254 (342)
                      +                              +++||+|||+   .+|+||||||+|||++++     .++.+++....  
T Consensus       102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~  178 (285)
T 3is5_A          102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK  178 (285)
T ss_dssp             CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred             CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence            1                              8899999999   999999999999999643     34555443321  


Q ss_pred             ---cccccccCcceee-------------------------cCCCCcccccccccccccc-cccccccCCCCCChHHHHH
Q 039505          255 ---MSTTIAGTAGFLN-------------------------TKNPVISKSIENGNSHLRD-KSTVDLSFKGEFDIISVGK  305 (342)
Q Consensus       255 ---~~~~~~Gt~~y~a-------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~l~~~~~~~~~~~  305 (342)
                         ......||+.|+|                         ||+.||.......   +.. .....+..... .......
T Consensus       179 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~  254 (285)
T 3is5_A          179 SDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEE---VQQKATYKEPNYAVE-CRPLTPQ  254 (285)
T ss_dssp             --------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHCCCCCCC---CCCCHH
T ss_pred             CcccCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCCCCHHH---HHhhhccCCcccccc-cCcCCHH
Confidence               1234678999998                         8999987643221   000 01111111111 1112345


Q ss_pred             HHHHHHHcccccCCCCCCHHHHHH
Q 039505          306 AVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       306 l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      +.+++.+||+.+|++|||+.|+++
T Consensus       255 ~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          255 AVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             HHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             HHHHHHHHccCChhhCcCHHHHhc
Confidence            788999999999999999999985

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.78  E-value=1.3e-19  Score=164.41  Aligned_cols=165  Identities=17%  Similarity=0.164  Sum_probs=110.2

Q ss_pred             hhccC--cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCCCcc--------------EE-EeeC--------------
Q 039505          160 TNNFE--RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQGHVP--------------IV-ECHV--------------  206 (342)
Q Consensus       160 t~~f~--~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~~~~--------------Lv-~c~~--------------  206 (342)
                      .++|.  +.||+|+||.||+|.+.. + .||||+++........+              ++ ++..              
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~   89 (284)
T 2a19_B           10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSR   89 (284)
T ss_dssp             HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCSGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------C
T ss_pred             ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccccHHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccc
Confidence            34566  899999999999999974 4 99999997654322222              33 3221              


Q ss_pred             --C---cEEE--E----------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccC
Q 039505          207 --G---ALIT--I----------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPV  249 (342)
Q Consensus       207 --~---~lv~--m----------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~  249 (342)
                        .   ++++  +                            +++||.|||+   .+|+||||||+|||++++  .++.++
T Consensus        90 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Df  166 (284)
T 2a19_B           90 SKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDF  166 (284)
T ss_dssp             CEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCC
T ss_pred             cCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHEEEcCCCCEEECcc
Confidence              1   2333  1                            8899999999   899999999999999988  444444


Q ss_pred             CCCCc-----cccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCC
Q 039505          250 EGGTH-----MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEF  298 (342)
Q Consensus       250 ~~~~~-----~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~  298 (342)
                      +....     ......||+.|+|                          ||..|+.......      ..+.+..+... 
T Consensus       167 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~------~~~~~~~~~~~-  239 (284)
T 2a19_B          167 GLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFF------TDLRDGIISDI-  239 (284)
T ss_dssp             TTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHH------HHHHTTCCCTT-
T ss_pred             hhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHHHH------HHhhccccccc-
Confidence            33211     1233568899988                          5555543221100      11111222222 


Q ss_pred             ChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccCC
Q 039505          299 DIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNGS  337 (342)
Q Consensus       299 ~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~~  337 (342)
                         ....+.+++.+||+.+|++|||+.|+++.|+.++.+
T Consensus       240 ---~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~  275 (284)
T 2a19_B          240 ---FDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS  275 (284)
T ss_dssp             ---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred             ---CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence               234478899999999999999999999999988765

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.78  E-value=5.3e-20  Score=171.53  Aligned_cols=162  Identities=12%  Similarity=0.092  Sum_probs=107.3

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC---cc--------------EE-EeeCC---cEEE--E-
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH---VP--------------IV-ECHVG---ALIT--I-  212 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~---~~--------------Lv-~c~~~---~lv~--m-  212 (342)
                      +.|.  +.||+|+||+||+|....+  .||+|.+........   ++              ++ ++...   ++|+  + 
T Consensus         5 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~   84 (321)
T 1tki_A            5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFIS   84 (321)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred             hceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCC
Confidence            4455  8999999999999998765  899999875421110   01              33 33332   3333  1 


Q ss_pred             --------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecC--C--CccccCCCCCc-----ccc
Q 039505          213 --------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNE--K--SRISPVEGGTH-----MST  257 (342)
Q Consensus       213 --------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~--~--a~~~~~~~~~~-----~~~  257 (342)
                                                +++||+|||+   .+|+||||||+|||++.  +  .++.+++....     ...
T Consensus        85 g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~---~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~  161 (321)
T 1tki_A           85 GLDIFERINTSAFELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFR  161 (321)
T ss_dssp             CCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEE
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCccc
Confidence                                      8999999999   99999999999999997  3  34444443321     123


Q ss_pred             ccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCC--CChHHHHHHHHH
Q 039505          258 TIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGE--FDIISVGKAVEI  309 (342)
Q Consensus       258 ~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~--~~~~~~~~l~~l  309 (342)
                      ...||+.|+|                          ||+.||.......   +. ..+........  ........+.++
T Consensus       162 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~-~~i~~~~~~~~~~~~~~~s~~~~~l  237 (321)
T 1tki_A          162 LLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ---II-ENIMNAEYTFDEEAFKEISIEAMDF  237 (321)
T ss_dssp             EEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH---HH-HHHHHTCCCCCHHHHTTSCHHHHHH
T ss_pred             cccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHH---HH-HHHHcCCCCCChhhhccCCHHHHHH
Confidence            3679999998                          8999987654321   11 01111111000  001224558899


Q ss_pred             HHHcccccCCCCCCHHHHHH
Q 039505          310 AMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       310 ~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      +.+||+.+|++|||+.|+++
T Consensus       238 i~~~L~~dp~~Rpt~~e~l~  257 (321)
T 1tki_A          238 VDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             HHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHcCCChhHCcCHHHHhc
Confidence            99999999999999999986

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.78  E-value=1.2e-19  Score=173.54  Aligned_cols=163  Identities=21%  Similarity=0.228  Sum_probs=106.3

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCC---CCCCc----c--------------EE-EeeCC---cEEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSS---SQGHV----P--------------IV-ECHVG---ALIT  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~---~~~~~----~--------------Lv-~c~~~---~lv~  211 (342)
                      ++|.  +.||+|+||.||+|+...+  .||||++....   .....    +              ++ ++...   ++|+
T Consensus        15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~   94 (384)
T 4fr4_A           15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV   94 (384)
T ss_dssp             GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            3455  8999999999999998765  89999986432   11100    1              34 44333   4443


Q ss_pred             --E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-----cc
Q 039505          212 --I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-----MS  256 (342)
Q Consensus       212 --m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-----~~  256 (342)
                        +                          ++.||.|||+   .+|+||||||+|||++.+  .++.+++....     ..
T Consensus        95 e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~  171 (384)
T 4fr4_A           95 DLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQI  171 (384)
T ss_dssp             CCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTCCB
T ss_pred             ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEECCCCCEEEeccceeeeccCCCce
Confidence              1                          8899999999   999999999999999988  44444443321     22


Q ss_pred             cccccCcceee-----------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHH
Q 039505          257 TTIAGTAGFLN-----------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAV  307 (342)
Q Consensus       257 ~~~~Gt~~y~a-----------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~  307 (342)
                      ...+||+.|+|                             ||+.||..........+.. .+...  ....+......+.
T Consensus       172 ~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~-~~~~~--~~~~p~~~s~~~~  248 (384)
T 4fr4_A          172 TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVH-TFETT--VVTYPSAWSQEMV  248 (384)
T ss_dssp             CCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHH-HHHHC--CCCCCTTSCHHHH
T ss_pred             eccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHH-HHhhc--ccCCCCcCCHHHH
Confidence            34689999998                             7788876433221101111 00000  0112223345688


Q ss_pred             HHHHHcccccCCCCCC-HHHHHH
Q 039505          308 EIAMASVSSKVNRRPL-MNQVVM  329 (342)
Q Consensus       308 ~l~~~Cl~~~P~~RPs-m~eV~~  329 (342)
                      +++.+||+.+|++||+ +.++.+
T Consensus       249 ~li~~lL~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          249 SLLKKLLEPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             HHHHHHSCSSGGGSCCSHHHHHT
T ss_pred             HHHHHHhcCCHhHhcccHHHHHc
Confidence            9999999999999998 666653

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.78  E-value=2.8e-20  Score=173.61  Aligned_cols=162  Identities=16%  Similarity=0.132  Sum_probs=94.9

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC-cc---------------EE-EeeCC---cEEE--E--------
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH-VP---------------IV-ECHVG---ALIT--I--------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~-~~---------------Lv-~c~~~---~lv~--m--------  212 (342)
                      +.||+|+||+||+|....+  .||||++........ ++               ++ ++...   ++|+  +        
T Consensus        17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   96 (325)
T 3kn6_A           17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFER   96 (325)
T ss_dssp             CCSEEETTEEEEEEEETTTCCEEEEEEEEGGGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHH
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEChhhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHHHH
Confidence            6899999999999999754  999999875421100 00               44 45444   4444  2        


Q ss_pred             ------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-----CccccCCCCCc------cccccccCc
Q 039505          213 ------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-----SRISPVEGGTH------MSTTIAGTA  263 (342)
Q Consensus       213 ------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-----a~~~~~~~~~~------~~~~~~Gt~  263 (342)
                                        +++||+|||+   .+|+||||||+|||++.+     .++.+++....      ......||+
T Consensus        97 l~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~  173 (325)
T 3kn6_A           97 IKKKKHFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTL  173 (325)
T ss_dssp             HHHCSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC------------
T ss_pred             HHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccCCCc
Confidence                              8999999999   999999999999999865     34444443321      123357899


Q ss_pred             ceee--------------------------cCCCCccccccccc-ccccc--cccccccC--CCCCChHHHHHHHHHHHH
Q 039505          264 GFLN--------------------------TKNPVISKSIENGN-SHLRD--KSTVDLSF--KGEFDIISVGKAVEIAMA  312 (342)
Q Consensus       264 ~y~a--------------------------tG~~P~~~~~~~~~-~~l~~--~~~~d~~l--~~~~~~~~~~~l~~l~~~  312 (342)
                      .|+|                          ||+.||........ ....+  ..+.....  ..+........+.+++..
T Consensus       174 ~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~  253 (325)
T 3kn6_A          174 HYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQG  253 (325)
T ss_dssp             ----------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHH
T ss_pred             CccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHH
Confidence            9998                          89999876433210 00000  11111111  111112234568899999


Q ss_pred             cccccCCCCCCHHHHHH
Q 039505          313 SVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       313 Cl~~~P~~RPsm~eV~~  329 (342)
                      ||+.+|++|||+.|+++
T Consensus       254 ~L~~dP~~Rpt~~ell~  270 (325)
T 3kn6_A          254 LLTVDPNKRLKMSGLRY  270 (325)
T ss_dssp             HHCCCTTTCCCTTTSTT
T ss_pred             HCCCChhHCCCHHHHhc
Confidence            99999999999999873

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.78  E-value=3e-19  Score=164.70  Aligned_cols=117  Identities=14%  Similarity=0.128  Sum_probs=79.4

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCC--------ccccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGT--------HMSTTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~--------~~~~~~~Gt~~y~a---------------  267 (342)
                      +++||+|||+   .+|+||||||+|||++.+  .++.+++...        .......||+.|+|               
T Consensus       157 i~~al~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di  233 (316)
T 2xir_A          157 VAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV  233 (316)
T ss_dssp             HHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHH
T ss_pred             HHHHHHHHHh---CCcccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHH
Confidence            7889999999   999999999999999977  3444333221        11223567888988               


Q ss_pred             -----------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhcc
Q 039505          268 -----------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       268 -----------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                                 | |+.|+.......  .+..  .+........+......+.+++.+||+.+|++|||+.|+++.|+.+.
T Consensus       234 ~slG~il~~l~t~g~~p~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  309 (316)
T 2xir_A          234 WSFGVLLWEIFSLGASPYPGVKIDE--EFCR--RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL  309 (316)
T ss_dssp             HHHHHHHHHHHTTSCCSSTTCCCSH--HHHH--HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCcccchhH--HHHH--HhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence                       7 999987643221  1111  00000011112223445889999999999999999999999999875


Q ss_pred             C
Q 039505          336 G  336 (342)
Q Consensus       336 ~  336 (342)
                      .
T Consensus       310 ~  310 (316)
T 2xir_A          310 Q  310 (316)
T ss_dssp             H
T ss_pred             h
Confidence            4

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.78  E-value=2.8e-19  Score=163.03  Aligned_cols=170  Identities=15%  Similarity=0.117  Sum_probs=102.4

Q ss_pred             ccC--cccCcCCCeeEEEEEECC--C---eEEEEEccCCCCCCCcc---------------------EE-EeeCC--cEE
Q 039505          162 NFE--RVPYKGGFITVYHGQLVK--S---EVAMKMLSPSSSQGHVP---------------------IV-ECHVG--ALI  210 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~--~---~vAVK~l~~~~~~~~~~---------------------Lv-~c~~~--~lv  210 (342)
                      +|.  +.||+|+||+||+|.+..  +   .||||+++.........                     ++ ++...  .++
T Consensus        19 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~v   98 (291)
T 1u46_A           19 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMV   98 (291)
T ss_dssp             GEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEE
T ss_pred             HeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCCceee
Confidence            454  899999999999998642  2   59999997653222111                     33 44333  333


Q ss_pred             E--E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-----
Q 039505          211 T--I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-----  254 (342)
Q Consensus       211 ~--m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-----  254 (342)
                      +  +                           +++||+|||+   .+|+||||||+|||++.+  .++.+++....     
T Consensus        99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~  175 (291)
T 1u46_A           99 TELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND  175 (291)
T ss_dssp             EECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-C
T ss_pred             EecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEEcCCCCEEEccccccccccccc
Confidence            3  1                           8999999999   999999999999999887  44444433211     


Q ss_pred             ----cccccccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHH
Q 039505          255 ----MSTTIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISV  303 (342)
Q Consensus       255 ----~~~~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~  303 (342)
                          ......+|+.|+|                          | |+.|+.......   +.. .+.........+....
T Consensus       176 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~-~~~~~~~~~~~~~~~~  251 (291)
T 1u46_A          176 DHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ---ILH-KIDKEGERLPRPEDCP  251 (291)
T ss_dssp             CEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH---HHH-HHHTSCCCCCCCTTCC
T ss_pred             cchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHH---HHH-HHHccCCCCCCCcCcC
Confidence                1122457778887                          7 999987654322   111 0111111111223344


Q ss_pred             HHHHHHHHHcccccCCCCCCHHHHHHHHHhccCCC
Q 039505          304 GKAVEIAMASVSSKVNRRPLMNQVVMVREQGNGSR  338 (342)
Q Consensus       304 ~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~~~  338 (342)
                      ..+.+++.+||+.+|++|||+.++++.|+++....
T Consensus       252 ~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~  286 (291)
T 1u46_A          252 QDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD  286 (291)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred             HHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence            56889999999999999999999999999887653

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.78  E-value=1.2e-19  Score=173.07  Aligned_cols=168  Identities=13%  Similarity=0.133  Sum_probs=108.1

Q ss_pred             HhhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc--------------EE-Eee--------------
Q 039505          159 VTNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP--------------IV-ECH--------------  205 (342)
Q Consensus       159 at~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~--------------Lv-~c~--------------  205 (342)
                      ..++|.  +.||+|+||+||+|+...+  .||||++........++              ++ ++.              
T Consensus         5 ~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~   84 (383)
T 3eb0_A            5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPD   84 (383)
T ss_dssp             -CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTSCCHHHHHHTTCCCTTBCCEEEEEEEC------------
T ss_pred             ccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHHcCCCCccchhheeeecCccccccccccc
Confidence            455666  8999999999999998654  99999987654433333              34 331              


Q ss_pred             ------------------------CC---cEEE--E-----------------------------ehhhhhhhhccCCCC
Q 039505          206 ------------------------VG---ALIT--I-----------------------------PKEGLEYLHQGLKHP  227 (342)
Q Consensus       206 ------------------------~~---~lv~--m-----------------------------ia~gL~yLH~~~~~~  227 (342)
                                              ..   ++|+  +                             +++||+|||+   .+
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~g  161 (383)
T 3eb0_A           85 DHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHS---LG  161 (383)
T ss_dssp             -------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT---TT
T ss_pred             ccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---Cc
Confidence                                    11   2333  1                             8899999999   99


Q ss_pred             eeeCCCCcceEEecC-C--CccccCCCCCc-----cccccccCcceee---------------------------cCCCC
Q 039505          228 IIQRDMKSTNILLNE-K--SRISPVEGGTH-----MSTTIAGTAGFLN---------------------------TKNPV  272 (342)
Q Consensus       228 IiHrDlKp~NILLd~-~--a~~~~~~~~~~-----~~~~~~Gt~~y~a---------------------------tG~~P  272 (342)
                      |+||||||+|||++. +  .++.+++....     ......||+.|+|                           ||+.|
T Consensus       162 i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~p  241 (383)
T 3eb0_A          162 ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPL  241 (383)
T ss_dssp             EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCC
Confidence            999999999999984 4  45555443321     1233568888988                           88888


Q ss_pred             cccccccc-cccccc-----------------cccccccCCCC-----CChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          273 ISKSIENG-NSHLRD-----------------KSTVDLSFKGE-----FDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       273 ~~~~~~~~-~~~l~~-----------------~~~~d~~l~~~-----~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      |....... ...++.                 .+..-+.+...     .+......+.+++.+||+.+|++|||+.|+++
T Consensus       242 f~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  321 (383)
T 3eb0_A          242 FSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMA  321 (383)
T ss_dssp             SCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             CCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            87653221 001110                 00000111100     12223455889999999999999999999984

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.78  E-value=1.2e-19  Score=167.69  Aligned_cols=166  Identities=16%  Similarity=0.188  Sum_probs=104.4

Q ss_pred             cccCcCCCeeEEEEEECC---C--eEEEEEccCCCCCCCc------c--------------EE-EeeCC--------cEE
Q 039505          165 RVPYKGGFITVYHGQLVK---S--EVAMKMLSPSSSQGHV------P--------------IV-ECHVG--------ALI  210 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~---~--~vAVK~l~~~~~~~~~------~--------------Lv-~c~~~--------~lv  210 (342)
                      +.||+|+||.||+|.+..   .  .||||+++........      +              ++ +|...        +++
T Consensus        40 ~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~v  119 (313)
T 3brb_A           40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVI  119 (313)
T ss_dssp             EEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEEEE
T ss_pred             cceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccEEE
Confidence            789999999999998753   2  7999999765322110      0              22 33221        222


Q ss_pred             E--E--------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc
Q 039505          211 T--I--------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH  254 (342)
Q Consensus       211 ~--m--------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~  254 (342)
                      +  +                                +++||.|||+   .+|+||||||+|||++++  .++.+++....
T Consensus       120 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~  196 (313)
T 3brb_A          120 LPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN---RNFLHRDLAARNCMLRDDMTVCVADFGLSKK  196 (313)
T ss_dssp             EECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCSGGGEEECTTSCEEECSCSCC--
T ss_pred             EecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEEeecCccee
Confidence            2  1                                8899999999   899999999999999988  34444433221


Q ss_pred             --------cccccccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCC
Q 039505          255 --------MSTTIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFD  299 (342)
Q Consensus       255 --------~~~~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~  299 (342)
                              ......+++.|+|                          | |+.|+.......   +.. .+... .....+
T Consensus       197 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---~~~-~~~~~-~~~~~~  271 (313)
T 3brb_A          197 IYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE---MYD-YLLHG-HRLKQP  271 (313)
T ss_dssp             --------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HHH-HHHTT-CCCCCB
T ss_pred             cccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH---HHH-HHHcC-CCCCCC
Confidence                    1122456777887                          7 888887643322   111 01110 111122


Q ss_pred             hHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccCCC
Q 039505          300 IISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNGSR  338 (342)
Q Consensus       300 ~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~~~  338 (342)
                      ......+.+++.+||+.+|++|||+.++++.|+.+.+..
T Consensus       272 ~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l  310 (313)
T 3brb_A          272 EDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL  310 (313)
T ss_dssp             TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             ccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence            334456889999999999999999999999999886543

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.78  E-value=5.1e-20  Score=175.75  Aligned_cols=89  Identities=24%  Similarity=0.365  Sum_probs=57.0

Q ss_pred             HhhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc---------------------EE-EeeC-C----
Q 039505          159 VTNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP---------------------IV-ECHV-G----  207 (342)
Q Consensus       159 at~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~---------------------Lv-~c~~-~----  207 (342)
                      ..++|.  +.||+|+||.||+|....+  .||||++..........                     ++ ++.. +    
T Consensus         7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~   86 (388)
T 3oz6_A            7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV   86 (388)
T ss_dssp             HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred             ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence            345666  8999999999999998754  99999986442211100                     44 4432 2    


Q ss_pred             cEEE--E------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCC
Q 039505          208 ALIT--I------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVE  250 (342)
Q Consensus       208 ~lv~--m------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~  250 (342)
                      ++|+  |                        +++||+|||+   .+|+||||||+|||++.+.  ++.+++
T Consensus        87 ~lv~e~~~~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG  154 (388)
T 3oz6_A           87 YLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLNAECHVKVADFG  154 (388)
T ss_dssp             EEEEECCSEEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred             EEEecccCcCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHeEEcCCCCEEecCCc
Confidence            4444  2                        8899999999   9999999999999999883  444443

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.78  E-value=1.9e-19  Score=177.44  Aligned_cols=163  Identities=19%  Similarity=0.195  Sum_probs=104.2

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc------c--------------EE-EeeCC---cEEE--
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV------P--------------IV-ECHVG---ALIT--  211 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~------~--------------Lv-~c~~~---~lv~--  211 (342)
                      .|.  +.||+|+||+||+|+...+  .||||++.........      +              ++ +|...   ++|+  
T Consensus        38 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~  117 (494)
T 3lij_A           38 MYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMEC  117 (494)
T ss_dssp             HEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             CeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEec
Confidence            455  8999999999999999755  8999999765322111      1              44 55444   3343  


Q ss_pred             E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-----CccccCCCCCc-----c
Q 039505          212 I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-----SRISPVEGGTH-----M  255 (342)
Q Consensus       212 m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-----a~~~~~~~~~~-----~  255 (342)
                      +                          +++||+|||+   .+|+||||||+|||++.+     .++.+++....     .
T Consensus       118 ~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~  194 (494)
T 3lij_A          118 YKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK  194 (494)
T ss_dssp             CCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBC
T ss_pred             CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCcc
Confidence            1                          8899999999   999999999999999864     34455443321     1


Q ss_pred             ccccccCcceee-------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHH
Q 039505          256 STTIAGTAGFLN-------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIA  310 (342)
Q Consensus       256 ~~~~~Gt~~y~a-------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~  310 (342)
                      .....||+.|+|                         ||+.||...........+.....  .............+.+++
T Consensus       195 ~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~li  272 (494)
T 3lij_A          195 MKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKY--TFDSPEWKNVSEGAKDLI  272 (494)
T ss_dssp             BCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--CCCSGGGTTSCHHHHHHH
T ss_pred             ccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--CCCchhcccCCHHHHHHH
Confidence            233679999998                         89999876543220000000000  010111112345588999


Q ss_pred             HHcccccCCCCCCHHHHHH
Q 039505          311 MASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       311 ~~Cl~~~P~~RPsm~eV~~  329 (342)
                      .+||+.+|++|||+.|+++
T Consensus       273 ~~~L~~dp~~R~s~~e~l~  291 (494)
T 3lij_A          273 KQMLQFDSQRRISAQQALE  291 (494)
T ss_dssp             HHHTCSSTTTSCCHHHHHT
T ss_pred             HHHCCCChhhCccHHHHhc
Confidence            9999999999999999874

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.78  E-value=1.9e-19  Score=168.20  Aligned_cols=115  Identities=16%  Similarity=0.152  Sum_probs=79.0

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc--------cccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH--------MSTTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~--------~~~~~~Gt~~y~a---------------  267 (342)
                      +++||+|||+   .+|+||||||+|||++.+.  ++.+++....        ......+|+.|+|               
T Consensus       166 i~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di  242 (334)
T 2pvf_A          166 LARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV  242 (334)
T ss_dssp             HHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHH
T ss_pred             HHHHHHHHHh---CCeeCCCCccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHH
Confidence            7889999999   9999999999999999884  4444433211        1122456778888               


Q ss_pred             -----------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhcc
Q 039505          268 -----------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       268 -----------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                                 | |+.|+.......   +..  .+........+......+.+++.+||+.+|++|||+.|+++.|+++.
T Consensus       243 ~slG~il~ellt~g~~p~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~  317 (334)
T 2pvf_A          243 WSFGVLMWEIFTLGGSPYPGIPVEE---LFK--LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL  317 (334)
T ss_dssp             HHHHHHHHHHHTTSCCSSTTCCHHH---HHH--HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCcCcCCHHH---HHH--HHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence                       7 999987643221   111  00001111122334456889999999999999999999999999874

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.78  E-value=2.4e-19  Score=173.18  Aligned_cols=168  Identities=15%  Similarity=0.163  Sum_probs=110.4

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc--------------EE-EeeC-----C----cEEE--E----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP--------------IV-ECHV-----G----ALIT--I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~--------------Lv-~c~~-----~----~lv~--m----  212 (342)
                      ++||+|+||+||+|++..+  .||||++........++              ++ +|..     .    .+|+  +    
T Consensus        60 ~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l  139 (420)
T 1j1b_A           60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV  139 (420)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECCCEEH
T ss_pred             eEEeeCCCEEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhcccccH
Confidence            8999999999999999754  99999997654333333              33 3321     1    2333  1    


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC---CccccCCCCCc-----ccccc
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK---SRISPVEGGTH-----MSTTI  259 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~---a~~~~~~~~~~-----~~~~~  259 (342)
                                               +++||+|||+   .+|+||||||+|||++.+   .++.+++....     .....
T Consensus       140 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~~~~~~  216 (420)
T 1j1b_A          140 YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY  216 (420)
T ss_dssp             HHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSC
T ss_pred             HHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChhhEEEeCCCCeEEeccchhhhhcccCCCceee
Confidence                                     8899999999   999999999999999965   35666554321     12335


Q ss_pred             ccCcceee---------------------------cCCCCcccccccc-cccccc-----------------cccccccC
Q 039505          260 AGTAGFLN---------------------------TKNPVISKSIENG-NSHLRD-----------------KSTVDLSF  294 (342)
Q Consensus       260 ~Gt~~y~a---------------------------tG~~P~~~~~~~~-~~~l~~-----------------~~~~d~~l  294 (342)
                      .||++|+|                           ||+.||....... ...++.                 .+..-+.+
T Consensus       217 ~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~  296 (420)
T 1j1b_A          217 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQI  296 (420)
T ss_dssp             CSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCC
T ss_pred             eeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCcc
Confidence            78999998                           8999987654221 001110                 00001111


Q ss_pred             CCC-----CChHHHHHHHHHHHHcccccCCCCCCHHHHHH--HHHhcc
Q 039505          295 KGE-----FDIISVGKAVEIAMASVSSKVNRRPLMNQVVM--VREQGN  335 (342)
Q Consensus       295 ~~~-----~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~--~L~~i~  335 (342)
                      ...     ........+.+++.+||+.+|++|||+.|+++  .+++++
T Consensus       297 ~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~  344 (420)
T 1j1b_A          297 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR  344 (420)
T ss_dssp             CCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred             CCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcccc
Confidence            110     11123456889999999999999999999984  344443

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.78  E-value=9.2e-20  Score=173.50  Aligned_cols=158  Identities=16%  Similarity=0.136  Sum_probs=101.2

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc------------------EE-EeeCC---cEEE--E------
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP------------------IV-ECHVG---ALIT--I------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~------------------Lv-~c~~~---~lv~--m------  212 (342)
                      +.||+|+||.||+|....+  .||||+++.........                  ++ +|...   ++|+  +      
T Consensus        95 ~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~  174 (373)
T 2x4f_A           95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELF  174 (373)
T ss_dssp             EECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEEH
T ss_pred             eEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHH
Confidence            6799999999999998654  99999997643211111                  44 55444   4444  2      


Q ss_pred             ---------------------ehhhhhhhhccCCCCeeeCCCCcceEEec--CC--CccccCCCCCc-----cccccccC
Q 039505          213 ---------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLN--EK--SRISPVEGGTH-----MSTTIAGT  262 (342)
Q Consensus       213 ---------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd--~~--a~~~~~~~~~~-----~~~~~~Gt  262 (342)
                                           +++||+|||+   .+|+||||||+|||++  ++  .++.+++....     ......||
T Consensus       175 ~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt  251 (373)
T 2x4f_A          175 DRIIDESYNLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGT  251 (373)
T ss_dssp             HHHHHTGGGCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCCCSS
T ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccccccCC
Confidence                                 8999999999   9999999999999994  33  45555443321     12235699


Q ss_pred             cceee--------------------------cCCCCccccccccccccccccccccc--CCCCCChHHHHHHHHHHHHcc
Q 039505          263 AGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLS--FKGEFDIISVGKAVEIAMASV  314 (342)
Q Consensus       263 ~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~--l~~~~~~~~~~~l~~l~~~Cl  314 (342)
                      ++|+|                          ||+.||.......  .+.  .+....  +...........+.+++.+||
T Consensus       252 ~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~--~~~--~i~~~~~~~~~~~~~~~~~~~~~li~~~L  327 (373)
T 2x4f_A          252 PEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE--TLN--NILACRWDLEDEEFQDISEEAKEFISKLL  327 (373)
T ss_dssp             CTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHH--HHH--HHHHTCCCSCSGGGTTSCHHHHHHHHTTS
T ss_pred             CcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH--HHH--HHHhccCCCChhhhccCCHHHHHHHHHHc
Confidence            99998                          8999987654322  110  111110  111111123456889999999


Q ss_pred             cccCCCCCCHHHHHH
Q 039505          315 SSKVNRRPLMNQVVM  329 (342)
Q Consensus       315 ~~~P~~RPsm~eV~~  329 (342)
                      +.+|++|||+.|+++
T Consensus       328 ~~dp~~Rps~~e~l~  342 (373)
T 2x4f_A          328 IKEKSWRISASEALK  342 (373)
T ss_dssp             CSSGGGSCCHHHHHH
T ss_pred             CCChhhCCCHHHHhc
Confidence            999999999999986

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.78  E-value=2e-19  Score=169.25  Aligned_cols=179  Identities=15%  Similarity=0.178  Sum_probs=106.6

Q ss_pred             HHHHHHhhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc-----------------EE-EeeC-----
Q 039505          154 ELSLRVTNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP-----------------IV-ECHV-----  206 (342)
Q Consensus       154 ~~l~~at~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~-----------------Lv-~c~~-----  206 (342)
                      .......++|.  +.||+|+||+||+|+...+  .||||++.........+                 ++ ++..     
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~   95 (360)
T 3e3p_A           16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD   95 (360)
T ss_dssp             HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred             hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence            34556677887  9999999999999998754  99999986654332222                 44 3321     


Q ss_pred             C-----cEEE--E-----------------------------ehhhhhhhh--ccCCCCeeeCCCCcceEEecC-C--Cc
Q 039505          207 G-----ALIT--I-----------------------------PKEGLEYLH--QGLKHPIIQRDMKSTNILLNE-K--SR  245 (342)
Q Consensus       207 ~-----~lv~--m-----------------------------ia~gL~yLH--~~~~~~IiHrDlKp~NILLd~-~--a~  245 (342)
                      .     ++|+  +                             ++.||.|||  +   .+|+||||||+|||++. +  .+
T Consensus        96 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~ivH~Dlkp~NIll~~~~~~~k  172 (360)
T 3e3p_A           96 RRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPS---VNVCHRDIKPHNVLVNEADGTLK  172 (360)
T ss_dssp             TTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTT---TCCBCSCCCGGGEEEETTTTEEE
T ss_pred             ccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCC---CCeecCcCCHHHEEEeCCCCcEE
Confidence            0     2232  1                             788999999  7   89999999999999986 5  45


Q ss_pred             cccCCCCCc-----cccccccCcceee---------------------------cCCCCcccccccc-cccccc------
Q 039505          246 ISPVEGGTH-----MSTTIAGTAGFLN---------------------------TKNPVISKSIENG-NSHLRD------  286 (342)
Q Consensus       246 ~~~~~~~~~-----~~~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~-~~~l~~------  286 (342)
                      +.+++....     ......||+.|+|                           ||+.||....... ...+..      
T Consensus       173 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~  252 (360)
T 3e3p_A          173 LCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPS  252 (360)
T ss_dssp             ECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCC
T ss_pred             EeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCC
Confidence            555443321     1223578999988                           8888887654221 001100      


Q ss_pred             ---ccccccc----------------CCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHH--HHhcc
Q 039505          287 ---KSTVDLS----------------FKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMV--REQGN  335 (342)
Q Consensus       287 ---~~~~d~~----------------l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~--L~~i~  335 (342)
                         ....++.                ............+.+++.+||+.+|++|||+.|+++.  ++++.
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  322 (360)
T 3e3p_A          253 REVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH  322 (360)
T ss_dssp             HHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred             HHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccC
Confidence               0000000                0011122245678999999999999999999999853  55443

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.78  E-value=1.9e-19  Score=175.04  Aligned_cols=161  Identities=18%  Similarity=0.211  Sum_probs=107.6

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCC---CCC----Ccc--------------EE-EeeCC---cEEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSS---SQG----HVP--------------IV-ECHVG---ALIT  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~---~~~----~~~--------------Lv-~c~~~---~lv~  211 (342)
                      ++|.  +.||+|+||.||+|....+  .||||+++...   ...    ..+              ++ +|...   ++|+
T Consensus       148 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~  227 (446)
T 4ejn_A          148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVM  227 (446)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEE
T ss_pred             HHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEE
Confidence            5566  8999999999999998755  99999986421   110    011              44 44433   4444


Q ss_pred             --E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------c
Q 039505          212 --I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------M  255 (342)
Q Consensus       212 --m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~  255 (342)
                        +                          +++||+|||+.  .+|+||||||+|||++.+  .++.+++....      .
T Consensus       228 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~--~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~  305 (446)
T 4ejn_A          228 EYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT  305 (446)
T ss_dssp             CCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC----
T ss_pred             eeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhc--CCEEECCCCHHHEEECCCCCEEEccCCCceeccCCCcc
Confidence              2                          89999999962  689999999999999988  44555443221      1


Q ss_pred             ccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHH
Q 039505          256 STTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEI  309 (342)
Q Consensus       256 ~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l  309 (342)
                      ....+||++|+|                          ||+.||.......   +.. .+.....  ..+......+.++
T Consensus       306 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~---~~~-~i~~~~~--~~p~~~~~~~~~l  379 (446)
T 4ejn_A          306 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK---LFE-LILMEEI--RFPRTLGPEAKSL  379 (446)
T ss_dssp             -CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHH-HHHHCCC--CCCTTSCHHHHHH
T ss_pred             cccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH---HHH-HHHhCCC--CCCccCCHHHHHH
Confidence            234689999999                          8999987654321   111 0111111  1122233458899


Q ss_pred             HHHcccccCCCCC-----CHHHHHH
Q 039505          310 AMASVSSKVNRRP-----LMNQVVM  329 (342)
Q Consensus       310 ~~~Cl~~~P~~RP-----sm~eV~~  329 (342)
                      +.+||+.||++||     ++.|+++
T Consensus       380 i~~~L~~dP~~R~~~~~~t~~ell~  404 (446)
T 4ejn_A          380 LSGLLKKDPKQRLGGGSEDAKEIMQ  404 (446)
T ss_dssp             HHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             HHHHcccCHHHhCCCCCCCHHHHHh
Confidence            9999999999999     9999875

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.78  E-value=1e-19  Score=176.80  Aligned_cols=172  Identities=16%  Similarity=0.173  Sum_probs=112.3

Q ss_pred             HHHHHHHhhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCC---CCC---Cc-c--------------EE-EeeC
Q 039505          153 LELSLRVTNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSS---SQG---HV-P--------------IV-ECHV  206 (342)
Q Consensus       153 ~~~l~~at~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~---~~~---~~-~--------------Lv-~c~~  206 (342)
                      +.++...+++|.  ++||+|+||+||+|++..+  .||||+++...   ...   .. +              +. +|..
T Consensus        66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~  145 (437)
T 4aw2_A           66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD  145 (437)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred             hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence            334445567887  8999999999999999865  89999986421   011   10 1              34 4444


Q ss_pred             C---cEEE--E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCC
Q 039505          207 G---ALIT--I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGG  252 (342)
Q Consensus       207 ~---~lv~--m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~  252 (342)
                      .   ++|+  +                           ++.||+|||+   .+||||||||+|||++.+  .++.+++..
T Consensus       146 ~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILl~~~g~vkL~DFGla  222 (437)
T 4aw2_A          146 DNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSC  222 (437)
T ss_dssp             SSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             CCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeeEcCCCCEEEcchhhh
Confidence            4   4444  2                           8899999999   999999999999999988  445544432


Q ss_pred             Cc-------cccccccCcceee-------------------------------cCCCCcccccccc-ccccccccccccc
Q 039505          253 TH-------MSTTIAGTAGFLN-------------------------------TKNPVISKSIENG-NSHLRDKSTVDLS  293 (342)
Q Consensus       253 ~~-------~~~~~~Gt~~y~a-------------------------------tG~~P~~~~~~~~-~~~l~~~~~~d~~  293 (342)
                      ..       .....+||++|+|                               ||+.||....... ...+... .....
T Consensus       223 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~-~~~~~  301 (437)
T 4aw2_A          223 LKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH-KERFQ  301 (437)
T ss_dssp             EECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTH-HHHCC
T ss_pred             hhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhc-ccccc
Confidence            11       1233689999998                               8889987643221 0011110 00011


Q ss_pred             CCCCCChHHHHHHHHHHHHcccccCCC--CCCHHHHHH
Q 039505          294 FKGEFDIISVGKAVEIAMASVSSKVNR--RPLMNQVVM  329 (342)
Q Consensus       294 l~~~~~~~~~~~l~~l~~~Cl~~~P~~--RPsm~eV~~  329 (342)
                      ++. ........+.+++.+|+..+|++  ||++.|+++
T Consensus       302 ~p~-~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~  338 (437)
T 4aw2_A          302 FPT-QVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK  338 (437)
T ss_dssp             CCS-SCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred             CCc-ccccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence            111 11123345788888999888888  999999875

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.78  E-value=4.1e-19  Score=165.08  Aligned_cols=155  Identities=18%  Similarity=0.246  Sum_probs=105.9

Q ss_pred             hhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC------c----c----------------EE-EeeCC-
Q 039505          160 TNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH------V----P----------------IV-ECHVG-  207 (342)
Q Consensus       160 t~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~------~----~----------------Lv-~c~~~-  207 (342)
                      .++|.  +.||+|+||.||+|....+  .||||++........      .    +                ++ ++... 
T Consensus        42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~  121 (320)
T 3a99_A           42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD  121 (320)
T ss_dssp             TTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred             cCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCC
Confidence            34455  8999999999999998654  999999876532210      0    0                44 44443 


Q ss_pred             --cEEE--E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEec-CC--CccccCCCCC
Q 039505          208 --ALIT--I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLN-EK--SRISPVEGGT  253 (342)
Q Consensus       208 --~lv~--m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd-~~--a~~~~~~~~~  253 (342)
                        ++++  +                           +++||+|||+   .+|+||||||+|||++ ++  .++.+++...
T Consensus       122 ~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~  198 (320)
T 3a99_A          122 SFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGA  198 (320)
T ss_dssp             EEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             cEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCcEeCCCCHHHEEEeCCCCCEEEeeCcccc
Confidence              3333  1                           8999999999   9999999999999998 44  4555544332


Q ss_pred             c----cccccccCcceee---------------------------cCCCCcccccccccccccccccccccCCCCCChHH
Q 039505          254 H----MSTTIAGTAGFLN---------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIIS  302 (342)
Q Consensus       254 ~----~~~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~  302 (342)
                      .    ......||+.|+|                           ||+.|+.......     ...   ...    +...
T Consensus       199 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-----~~~---~~~----~~~~  266 (320)
T 3a99_A          199 LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII-----RGQ---VFF----RQRV  266 (320)
T ss_dssp             ECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHH-----HCC---CCC----SSCC
T ss_pred             ccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhh-----ccc---ccc----cccC
Confidence            1    1233568999998                           8888876532111     000   011    1122


Q ss_pred             HHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          303 VGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       303 ~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ...+.+++.+||+.+|++|||+.|+++
T Consensus       267 ~~~~~~li~~~l~~dp~~Rps~~~ll~  293 (320)
T 3a99_A          267 SSECQHLIRWCLALRPSDRPTFEEIQN  293 (320)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            345889999999999999999999986

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.78  E-value=2.9e-19  Score=164.73  Aligned_cols=165  Identities=15%  Similarity=0.115  Sum_probs=103.1

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC------cc--------------EE-EeeCC---cEEE--
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH------VP--------------IV-ECHVG---ALIT--  211 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~------~~--------------Lv-~c~~~---~lv~--  211 (342)
                      +|.  +.||+|+||+||+|....+  .||||++........      .+              ++ +|...   ++|+  
T Consensus         4 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (311)
T 4agu_A            4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEY   83 (311)
T ss_dssp             CEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEe
Confidence            455  8999999999999999764  999999866543211      01              44 44443   4444  


Q ss_pred             E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc------ccc
Q 039505          212 I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH------MST  257 (342)
Q Consensus       212 m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~------~~~  257 (342)
                      +                          +++||+|||+   .+|+||||||+|||++.+.  ++.+++....      ...
T Consensus        84 ~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  160 (311)
T 4agu_A           84 CDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHK---HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYD  160 (311)
T ss_dssp             CSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECC-------
T ss_pred             CCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccC
Confidence            2                          8899999999   9999999999999999884  4444433211      112


Q ss_pred             ccccCcceee---------------------------cCCCCcccccccccccccc----------------------cc
Q 039505          258 TIAGTAGFLN---------------------------TKNPVISKSIENGNSHLRD----------------------KS  288 (342)
Q Consensus       258 ~~~Gt~~y~a---------------------------tG~~P~~~~~~~~~~~l~~----------------------~~  288 (342)
                      ...||+.|+|                           ||+.|+...........+.                      ..
T Consensus       161 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (311)
T 4agu_A          161 DEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVK  240 (311)
T ss_dssp             -----GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCC
T ss_pred             CCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCc
Confidence            3568888888                           8888886643221000000                      00


Q ss_pred             cccccCCCC---CChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          289 TVDLSFKGE---FDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       289 ~~d~~l~~~---~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ..++.....   ........+.+++.+||+.+|++|||+.|+++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  284 (311)
T 4agu_A          241 IPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH  284 (311)
T ss_dssp             CCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred             CCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence            001000000   00123445889999999999999999999985

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.78  E-value=4.4e-20  Score=174.06  Aligned_cols=160  Identities=18%  Similarity=0.237  Sum_probs=107.3

Q ss_pred             HhhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCC---CCCCc----c---------------EE-EeeCC---c
Q 039505          159 VTNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSS---SQGHV----P---------------IV-ECHVG---A  208 (342)
Q Consensus       159 at~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~---~~~~~----~---------------Lv-~c~~~---~  208 (342)
                      ..++|.  ++||+|+||.||+|+...+  .||||+++...   .....    +               +. ++...   +
T Consensus        15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~   94 (345)
T 1xjd_A           15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF   94 (345)
T ss_dssp             -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred             ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence            345676  8999999999999999755  89999986531   11100    0               33 33333   3


Q ss_pred             EEE--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc----
Q 039505          209 LIT--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH----  254 (342)
Q Consensus       209 lv~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~----  254 (342)
                      +|+  +                          ++.||+|||+   .+|+||||||+|||++.+  .++.+++....    
T Consensus        95 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~  171 (345)
T 1xjd_A           95 FVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG  171 (345)
T ss_dssp             EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred             EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCChhhEEECCCCCEEEeEChhhhhcccC
Confidence            333  1                          8899999999   999999999999999988  44444443221    


Q ss_pred             --cccccccCcceee--------------------------cCCCCcccccccccccccc-cccccccCCCCCChHHHHH
Q 039505          255 --MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRD-KSTVDLSFKGEFDIISVGK  305 (342)
Q Consensus       255 --~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~l~~~~~~~~~~~  305 (342)
                        .....+||+.|+|                          ||+.||.......   +.. .....+.+    +......
T Consensus       172 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~---~~~~i~~~~~~~----p~~~s~~  244 (345)
T 1xjd_A          172 DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE---LFHSIRMDNPFY----PRWLEKE  244 (345)
T ss_dssp             TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHCCCCC----CTTSCHH
T ss_pred             CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHH---HHHHHHhCCCCC----CcccCHH
Confidence              2334689999998                          8999987643221   111 00111222    2223345


Q ss_pred             HHHHHHHcccccCCCCCCHH-HHH
Q 039505          306 AVEIAMASVSSKVNRRPLMN-QVV  328 (342)
Q Consensus       306 l~~l~~~Cl~~~P~~RPsm~-eV~  328 (342)
                      +.+++.+||+.+|++||++. ++.
T Consensus       245 ~~~li~~lL~~dp~~R~~~~~~i~  268 (345)
T 1xjd_A          245 AKDLLVKLFVREPEKRLGVRGDIR  268 (345)
T ss_dssp             HHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             HHHHHHHHhcCCHhHcCCChHHHH
Confidence            88899999999999999987 554

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.78  E-value=3.2e-19  Score=161.79  Aligned_cols=160  Identities=21%  Similarity=0.311  Sum_probs=97.8

Q ss_pred             hccC--cccCcCCCeeEEEEEECC-C-eEEEEEccCCCC---CCCc----c--------------EE-EeeCC---cEEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSS---QGHV----P--------------IV-ECHVG---ALIT  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~---~~~~----~--------------Lv-~c~~~---~lv~  211 (342)
                      ++|.  +.||+|+||.||+|.... + .||||++.....   ....    +              ++ ++...   ++++
T Consensus        11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   90 (278)
T 3cok_A           11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL   90 (278)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence            4555  899999999999999854 4 999999864311   0000    0              44 44444   3333


Q ss_pred             --E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc------
Q 039505          212 --I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH------  254 (342)
Q Consensus       212 --m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~------  254 (342)
                        +                           +++||+|||+   .+|+||||||+||+++.+.  ++.+++....      
T Consensus        91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~  167 (278)
T 3cok_A           91 EMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE  167 (278)
T ss_dssp             ECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSSCCGGGEEECTTCCEEECCCTTCEECC----
T ss_pred             ecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC
Confidence              1                           8999999999   9999999999999999884  4444332221      


Q ss_pred             cccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHH
Q 039505          255 MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVE  308 (342)
Q Consensus       255 ~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~  308 (342)
                      ......||+.|+|                          ||+.|+.......  .+......+...    +......+.+
T Consensus       168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~~  241 (278)
T 3cok_A          168 KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN--TLNKVVLADYEM----PSFLSIEAKD  241 (278)
T ss_dssp             ------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------CCSSCCCC----CTTSCHHHHH
T ss_pred             cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHH--HHHHHhhcccCC----ccccCHHHHH
Confidence            1123568888888                          8998887543221  000011111111    2223445889


Q ss_pred             HHHHcccccCCCCCCHHHHHH
Q 039505          309 IAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       309 l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ++.+||+.+|++|||+.++++
T Consensus       242 li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          242 LIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             HHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHHHcccCHhhCCCHHHHhc
Confidence            999999999999999999985

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.78  E-value=1.2e-19  Score=171.63  Aligned_cols=160  Identities=19%  Similarity=0.225  Sum_probs=106.5

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCC---CCCc----c---------------EE-EeeCC---cEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSS---QGHV----P---------------IV-ECHVG---ALI  210 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~---~~~~----~---------------Lv-~c~~~---~lv  210 (342)
                      ++|.  ++||+|+||+||+|+...+  .||||+++....   ....    +               +. ++...   ++|
T Consensus        20 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv   99 (353)
T 2i0e_A           20 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV   99 (353)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEE
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEE
Confidence            4566  8999999999999999865  899999865310   0000    0               22 23322   333


Q ss_pred             E--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------
Q 039505          211 T--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------  254 (342)
Q Consensus       211 ~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------  254 (342)
                      +  +                          ++.||+|||+   .+|+||||||+|||++.+  .++.+++....      
T Consensus       100 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~  176 (353)
T 2i0e_A          100 MEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV  176 (353)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred             EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCCc
Confidence            3  1                          8999999999   999999999999999988  44444443221      


Q ss_pred             cccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHH
Q 039505          255 MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVE  308 (342)
Q Consensus       255 ~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~  308 (342)
                      .....+||+.|+|                          ||+.||.......   +. ..+....+  ..+......+.+
T Consensus       177 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~---~~-~~i~~~~~--~~p~~~s~~~~~  250 (353)
T 2i0e_A          177 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE---LF-QSIMEHNV--AYPKSMSKEAVA  250 (353)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HH-HHHHHCCC--CCCTTSCHHHHH
T ss_pred             ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHH---HH-HHHHhCCC--CCCCCCCHHHHH
Confidence            2234689999999                          8999987643221   11 11111111  112233456889


Q ss_pred             HHHHcccccCCCCCC-----HHHHHH
Q 039505          309 IAMASVSSKVNRRPL-----MNQVVM  329 (342)
Q Consensus       309 l~~~Cl~~~P~~RPs-----m~eV~~  329 (342)
                      ++.+||+.+|++||+     +.++.+
T Consensus       251 li~~lL~~dP~~R~~~~~~~~~~i~~  276 (353)
T 2i0e_A          251 ICKGLMTKHPGKRLGCGPEGERDIKE  276 (353)
T ss_dssp             HHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred             HHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence            999999999999995     466653

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.78  E-value=1.7e-19  Score=167.75  Aligned_cols=161  Identities=15%  Similarity=0.137  Sum_probs=96.8

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc--------------------EE-EeeCC---cEEE--E----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP--------------------IV-ECHVG---ALIT--I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~--------------------Lv-~c~~~---~lv~--m----  212 (342)
                      +.||+|+||.||+|....+  .||||++..........                    ++ ++...   ++|+  +    
T Consensus        28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~~l  107 (327)
T 3aln_A           28 GEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSF  107 (327)
T ss_dssp             CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSEEH
T ss_pred             heeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCCCh
Confidence            8899999999999999744  99999997653211110                    34 44333   3443  1    


Q ss_pred             --------------------------ehhhhhhhhccCCC-CeeeCCCCcceEEecCC--CccccCCCCCcc-----ccc
Q 039505          213 --------------------------PKEGLEYLHQGLKH-PIIQRDMKSTNILLNEK--SRISPVEGGTHM-----STT  258 (342)
Q Consensus       213 --------------------------ia~gL~yLH~~~~~-~IiHrDlKp~NILLd~~--a~~~~~~~~~~~-----~~~  258 (342)
                                                +++||.|||+   . +|+||||||+|||++.+  .++.+++.....     ...
T Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~  184 (327)
T 3aln_A          108 DKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE---NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTR  184 (327)
T ss_dssp             HHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH---HHSCCCSCCCGGGEEEETTTEEEECCCSSSCC---------
T ss_pred             HHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhc---cCCEeECCCCHHHEEEcCCCCEEEccCCCceeccccccccc
Confidence                                      8899999999   7 99999999999999988  444444432211     122


Q ss_pred             cccCcceee------------------------------cCCCCcccccccccccccc-cccccccCCCCCChHHHHHHH
Q 039505          259 IAGTAGFLN------------------------------TKNPVISKSIENGNSHLRD-KSTVDLSFKGEFDIISVGKAV  307 (342)
Q Consensus       259 ~~Gt~~y~a------------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~l~~~~~~~~~~~l~  307 (342)
                      ..||+.|+|                              ||+.|+........ .+.. .....+.+...........+.
T Consensus       185 ~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~  263 (327)
T 3aln_A          185 DAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD-QLTQVVKGDPPQLSNSEEREFSPSFI  263 (327)
T ss_dssp             ---------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------CCCCCSCCCCCCCCSSCCCCHHHH
T ss_pred             CCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH-HHHHHhcCCCCCCCCcccccCCHHHH
Confidence            368888877                              88888875432110 0000 011111222212223445688


Q ss_pred             HHHHHcccccCCCCCCHHHHHH
Q 039505          308 EIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       308 ~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      +++.+||+.+|++|||+.++++
T Consensus       264 ~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          264 NFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHHhhCChhhCcCHHHHHh
Confidence            9999999999999999999874

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.78  E-value=9.2e-20  Score=168.54  Aligned_cols=171  Identities=16%  Similarity=0.141  Sum_probs=107.7

Q ss_pred             ccC--cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCCCcc------------------EE-EeeC---C----cEEE
Q 039505          162 NFE--RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQGHVP------------------IV-ECHV---G----ALIT  211 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~~~~------------------Lv-~c~~---~----~lv~  211 (342)
                      +|.  +.||+|+||.||++.... + .||||++..........                  ++ +|..   .    ++++
T Consensus        30 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~  109 (317)
T 2buj_A           30 HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLL  109 (317)
T ss_dssp             EEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEE
T ss_pred             EEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEE
Confidence            455  899999999999999854 4 99999886532111110                  33 3321   1    2333


Q ss_pred             --E------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCccc-
Q 039505          212 --I------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHMS-  256 (342)
Q Consensus       212 --m------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~~~-  256 (342)
                        +                              +++||+|||+   .+|+||||||+|||++.+.  ++.+++...... 
T Consensus       110 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~  186 (317)
T 2buj_A          110 PFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACI  186 (317)
T ss_dssp             ECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCSSCEESCE
T ss_pred             EeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCCEEEEecCcchhccc
Confidence              1                              8999999999   8999999999999999884  444433221110 


Q ss_pred             --------------cccccCcceee-----------------------------cCCCCccccccccccccccccccccc
Q 039505          257 --------------TTIAGTAGFLN-----------------------------TKNPVISKSIENGNSHLRDKSTVDLS  293 (342)
Q Consensus       257 --------------~~~~Gt~~y~a-----------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~  293 (342)
                                    ....||+.|+|                             ||+.|+.......  ..... .....
T Consensus       187 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~~~~-~~~~~  263 (317)
T 2buj_A          187 HVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG--DSVAL-AVQNQ  263 (317)
T ss_dssp             EEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTT--SCHHH-HHHCC
T ss_pred             ccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhccc--chhhH-Hhhcc
Confidence                          12346777876                             7888876432111  00000 00001


Q ss_pred             CCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccCCC
Q 039505          294 FKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNGSR  338 (342)
Q Consensus       294 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~~~  338 (342)
                      ............+.+++.+||+.+|.+|||+.++++.|+.++...
T Consensus       264 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~  308 (317)
T 2buj_A          264 LSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPA  308 (317)
T ss_dssp             --CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCC
T ss_pred             CCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCC
Confidence            111112233456889999999999999999999999999987653

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.78  E-value=9.6e-20  Score=176.53  Aligned_cols=100  Identities=22%  Similarity=0.242  Sum_probs=71.3

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC---cc--------------------EE-EeeCC---cEEE--E-
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH---VP--------------------IV-ECHVG---ALIT--I-  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~---~~--------------------Lv-~c~~~---~lv~--m-  212 (342)
                      ++||+|+||+||+|....+  .||||++........   .+                    ++ ++...   ++|+  + 
T Consensus       103 ~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~  182 (429)
T 3kvw_A          103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLS  182 (429)
T ss_dssp             EEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCCC
T ss_pred             EEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEeccC
Confidence            8999999999999998765  999999975421000   00                    33 33332   4444  1 


Q ss_pred             --------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC----ccccCCCCCc---ccccc
Q 039505          213 --------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS----RISPVEGGTH---MSTTI  259 (342)
Q Consensus       213 --------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a----~~~~~~~~~~---~~~~~  259 (342)
                                                +++||+|||+   .+|+||||||+|||++.+.    ++.+++....   .....
T Consensus       183 ~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~~~~~  259 (429)
T 3kvw_A          183 MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHK---NRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTY  259 (429)
T ss_dssp             CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---HTEECSCCSGGGEEESSTTSCCEEECCCTTCEETTCCCCSS
T ss_pred             CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEccCCCcceEEeecccceecCCccccc
Confidence                                      8999999999   8999999999999999873    4444443321   22346


Q ss_pred             ccCcceee
Q 039505          260 AGTAGFLN  267 (342)
Q Consensus       260 ~Gt~~y~a  267 (342)
                      .||+.|+|
T Consensus       260 ~gt~~y~a  267 (429)
T 3kvw_A          260 IQSRFYRA  267 (429)
T ss_dssp             CSCGGGCC
T ss_pred             CCCCCccC
Confidence            79999998

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.78  E-value=7.7e-20  Score=169.11  Aligned_cols=167  Identities=16%  Similarity=0.208  Sum_probs=103.5

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-------c--------------EE-EeeCC-------c
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-------P--------------IV-ECHVG-------A  208 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-------~--------------Lv-~c~~~-------~  208 (342)
                      .|.  +.||+|+||.||+|+...+  .||||++.........       +              ++ ++...       +
T Consensus        13 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~   92 (311)
T 3ork_A           13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPY   92 (311)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred             cEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccE
Confidence            454  8999999999999998544  9999999765433211       1              33 33221       2


Q ss_pred             EEE--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc----
Q 039505          209 LIT--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH----  254 (342)
Q Consensus       209 lv~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~----  254 (342)
                      +|+  +                          +++||+|||+   .+|+||||||+|||++.+  .++.+++....    
T Consensus        93 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~  169 (311)
T 3ork_A           93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADS  169 (311)
T ss_dssp             EEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEETTSCEEECCCSCC------
T ss_pred             EEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEcCCCCEEEeeccCccccccc
Confidence            333  1                          8899999999   999999999999999988  44444443211    


Q ss_pred             -----cccccccCcceee--------------------------cCCCCccccccccc-ccccccccccccCCCCCChHH
Q 039505          255 -----MSTTIAGTAGFLN--------------------------TKNPVISKSIENGN-SHLRDKSTVDLSFKGEFDIIS  302 (342)
Q Consensus       255 -----~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~-~~l~~~~~~d~~l~~~~~~~~  302 (342)
                           ......||+.|+|                          ||+.||........ ..........+.   ......
T Consensus       170 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~  246 (311)
T 3ork_A          170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS---ARHEGL  246 (311)
T ss_dssp             ------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHH---HHSTTC
T ss_pred             ccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcc---cccCCC
Confidence                 1123568999998                          89999876543210 000000000000   001123


Q ss_pred             HHHHHHHHHHcccccCCCCCCHHH-HHHHHHhc
Q 039505          303 VGKAVEIAMASVSSKVNRRPLMNQ-VVMVREQG  334 (342)
Q Consensus       303 ~~~l~~l~~~Cl~~~P~~RPsm~e-V~~~L~~i  334 (342)
                      ...+.+++.+||+.+|++||+..+ +...+..+
T Consensus       247 ~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  279 (311)
T 3ork_A          247 SADLDAVVLKALAKNPENRYQTAAEMRADLVRV  279 (311)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence            455889999999999999996555 44555554

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.78  E-value=1.5e-19  Score=170.45  Aligned_cols=161  Identities=17%  Similarity=0.161  Sum_probs=104.8

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCC---C-C-CCc----c--------------EE-EeeCC---cEE
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSS---S-Q-GHV----P--------------IV-ECHVG---ALI  210 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~---~-~-~~~----~--------------Lv-~c~~~---~lv  210 (342)
                      .|.  +.||+|+||+||+|....+  .||||++....   . . ...    +              ++ ++...   ++|
T Consensus        25 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv  104 (351)
T 3c0i_A           25 VYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMV  104 (351)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             ceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            455  8999999999999998754  99999985321   1 1 111    1              33 33332   333


Q ss_pred             E--E------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-----CccccCCCCC
Q 039505          211 T--I------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-----SRISPVEGGT  253 (342)
Q Consensus       211 ~--m------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-----a~~~~~~~~~  253 (342)
                      +  +                              +++||+|||+   .+|+||||||+|||++.+     .++.+++...
T Consensus       105 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~  181 (351)
T 3c0i_A          105 FEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAI  181 (351)
T ss_dssp             EECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECSSSTTCCEEECCCTTCE
T ss_pred             EeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChHHeEEecCCCCCcEEEecCccee
Confidence            3  1                              8999999999   999999999999999865     3444444321


Q ss_pred             c------cccccccCcceee--------------------------cCCCCcccccccccccccccc-cccccCCCCCCh
Q 039505          254 H------MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKS-TVDLSFKGEFDI  300 (342)
Q Consensus       254 ~------~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~-~~d~~l~~~~~~  300 (342)
                      .      ......||+.|+|                          ||+.||..........+.... ..++..    ..
T Consensus       182 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~i~~~~~~~~~~~----~~  257 (351)
T 3c0i_A          182 QLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQ----WS  257 (351)
T ss_dssp             ECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHHHHHTCCCCCHHH----HT
T ss_pred             EecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHHHHcCCCCCCccc----cc
Confidence            1      1233579999998                          888888764322110110000 001000    01


Q ss_pred             HHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          301 ISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       301 ~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      .....+.+++.+||+.+|++|||+.|+++
T Consensus       258 ~~s~~~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          258 HISESAKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             TSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            22355889999999999999999999974

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.78  E-value=3.5e-19  Score=165.69  Aligned_cols=118  Identities=17%  Similarity=0.215  Sum_probs=79.2

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-----cccccccCcceee------------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-----MSTTIAGTAGFLN------------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-----~~~~~~Gt~~y~a------------------  267 (342)
                      +++||+|||+   .+|+||||||+|||++.+  .++.+++....     ......+++.|+|                  
T Consensus       151 i~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl  227 (327)
T 1fvr_A          151 VARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSY  227 (327)
T ss_dssp             HHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHH
T ss_pred             HHHHHHHHHh---CCccCCCCccceEEEcCCCeEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHH
Confidence            7789999999   999999999999999987  44444433211     1122456777887                  


Q ss_pred             --------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccCCC
Q 039505          268 --------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNGSR  338 (342)
Q Consensus       268 --------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~~~  338 (342)
                              | |+.|+.......   +..  .+........+......+.+++.+||+.+|++|||+.|+++.|+.+.+..
T Consensus       228 G~il~ellt~g~~pf~~~~~~~---~~~--~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  302 (327)
T 1fvr_A          228 GVLLWEIVSLGGTPYCGMTCAE---LYE--KLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER  302 (327)
T ss_dssp             HHHHHHHHTTSCCTTTTCCHHH---HHH--HGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred             HHHHHHHHcCCCCCCCCCcHHH---HHH--HhhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence                    7 999987653221   110  11111111222334456889999999999999999999999998875543

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.78  E-value=1.8e-19  Score=177.18  Aligned_cols=162  Identities=20%  Similarity=0.207  Sum_probs=107.2

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC--c----c--------------EE-EeeCC---cEEE-
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH--V----P--------------IV-ECHVG---ALIT-  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~--~----~--------------Lv-~c~~~---~lv~-  211 (342)
                      +.|.  +.||+|+||+||+|....+  .||||++........  .    +              ++ ++...   ++|+ 
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  101 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE  101 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence            3455  8999999999999998744  999999854321111  0    1              44 44443   3333 


Q ss_pred             -E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-----CccccCCCCCc-----
Q 039505          212 -I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-----SRISPVEGGTH-----  254 (342)
Q Consensus       212 -m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-----a~~~~~~~~~~-----  254 (342)
                       +                          +++||.|||+   .+|+||||||+|||++.+     .++.+++....     
T Consensus       102 ~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~  178 (486)
T 3mwu_A          102 LYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT  178 (486)
T ss_dssp             CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC-
T ss_pred             cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCC
Confidence             1                          8899999999   999999999999999643     44555443321     


Q ss_pred             cccccccCcceee-------------------------cCCCCccccccccccccccccccccc--CCCCCChHHHHHHH
Q 039505          255 MSTTIAGTAGFLN-------------------------TKNPVISKSIENGNSHLRDKSTVDLS--FKGEFDIISVGKAV  307 (342)
Q Consensus       255 ~~~~~~Gt~~y~a-------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~--l~~~~~~~~~~~l~  307 (342)
                      ......||+.|+|                         ||+.||.......   +.. .+....  ...+........+.
T Consensus       179 ~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~~-~i~~~~~~~~~~~~~~~s~~~~  254 (486)
T 3mwu_A          179 KMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYD---ILK-RVETGKYAFDLPQWRTISDDAK  254 (486)
T ss_dssp             ---CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHH-HHHHTCCCSCSGGGGGSCHHHH
T ss_pred             ccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHH-HHHhCCCCCCCcccCCCCHHHH
Confidence            1233579999998                         8999987654322   110 011111  11111123345688


Q ss_pred             HHHHHcccccCCCCCCHHHHHH
Q 039505          308 EIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       308 ~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      +++.+||+.+|++|||+.|+++
T Consensus       255 ~li~~~L~~dp~~R~t~~~~l~  276 (486)
T 3mwu_A          255 DLIRKMLTFHPSLRITATQCLE  276 (486)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHcCCChhhCcCHHHHhc
Confidence            9999999999999999999986

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.77  E-value=1.6e-19  Score=173.41  Aligned_cols=162  Identities=16%  Similarity=0.098  Sum_probs=101.4

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc---------------EE-EeeC----C---cEEE--E-----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP---------------IV-ECHV----G---ALIT--I-----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~---------------Lv-~c~~----~---~lv~--m-----  212 (342)
                      ++||+|+||+||+|....+  .||||+++.... ...+               ++ ++..    .   ++|+  +     
T Consensus        68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L  146 (400)
T 1nxk_A           68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK-ARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGEL  146 (400)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECSHH-HHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEH
T ss_pred             ceeeeccCeEEEEEEECCCCCEEEEEEeCcchh-HHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCCCcH
Confidence            5899999999999998755  899999864210 0000               33 3221    1   3333  1     


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecC---C--CccccCCCCCc-----ccccc
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNE---K--SRISPVEGGTH-----MSTTI  259 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~---~--a~~~~~~~~~~-----~~~~~  259 (342)
                                             +++||+|||+   .+|+||||||+|||++.   +  .++.+++....     .....
T Consensus       147 ~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  223 (400)
T 1nxk_A          147 FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP  223 (400)
T ss_dssp             HHHHHCC---CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC--------
T ss_pred             HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCcceEEEecCCCCccEEEEecccccccCCCCccccC
Confidence                                   8899999999   99999999999999997   3  45555544322     12346


Q ss_pred             ccCcceee--------------------------cCCCCcccccccccccccccccc--cccCCCCCChHHHHHHHHHHH
Q 039505          260 AGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTV--DLSFKGEFDIISVGKAVEIAM  311 (342)
Q Consensus       260 ~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~--d~~l~~~~~~~~~~~l~~l~~  311 (342)
                      +||+.|+|                          ||+.||..........-....+.  ...............+.+++.
T Consensus       224 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~  303 (400)
T 1nxk_A          224 CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR  303 (400)
T ss_dssp             ---CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHH
T ss_pred             CCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCCHHHHHHHH
Confidence            78999998                          89999876533210000000000  001111111233456889999


Q ss_pred             HcccccCCCCCCHHHHHHH
Q 039505          312 ASVSSKVNRRPLMNQVVMV  330 (342)
Q Consensus       312 ~Cl~~~P~~RPsm~eV~~~  330 (342)
                      +||+.+|++|||+.|+++.
T Consensus       304 ~~L~~dP~~Rpt~~eil~h  322 (400)
T 1nxk_A          304 NLLKTEPTQRMTITEFMNH  322 (400)
T ss_dssp             TTSCSSGGGSCCHHHHHHS
T ss_pred             HHCCCChhHCcCHHHHhcC
Confidence            9999999999999999863

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.77  E-value=1.3e-19  Score=164.41  Aligned_cols=160  Identities=14%  Similarity=0.136  Sum_probs=107.7

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc------------------EE-EeeCC---cEEE--E
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP------------------IV-ECHVG---ALIT--I  212 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~------------------Lv-~c~~~---~lv~--m  212 (342)
                      +.|.  +.||+|+||+||+|....+  .||+|++..........                  ++ +|..+   ++|+  +
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   88 (277)
T 3f3z_A            9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC   88 (277)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEecc
Confidence            4455  8999999999999999766  89999987653332211                  44 55444   3443  1


Q ss_pred             --------------------------ehhhhhhhhccCCCCeeeCCCCcceEEe---cCC--CccccCCCCCc-----cc
Q 039505          213 --------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILL---NEK--SRISPVEGGTH-----MS  256 (342)
Q Consensus       213 --------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILL---d~~--a~~~~~~~~~~-----~~  256 (342)
                                                +++||+|||+   .+|+||||||+|||+   +.+  .++.+++....     ..
T Consensus        89 ~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~  165 (277)
T 3f3z_A           89 TGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMM  165 (277)
T ss_dssp             CSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCB
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccch
Confidence                                      8899999999   999999999999999   444  34444433211     12


Q ss_pred             cccccCcceee-------------------------cCCCCcccccccccccccccccccccCCCCCCh----HHHHHHH
Q 039505          257 TTIAGTAGFLN-------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDI----ISVGKAV  307 (342)
Q Consensus       257 ~~~~Gt~~y~a-------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~----~~~~~l~  307 (342)
                      ....||+.|+|                         ||+.|+.......  .+  ..+.....  ..+.    .....+.
T Consensus       166 ~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~--~~~~~~~~--~~~~~~~~~~~~~~~  239 (277)
T 3f3z_A          166 RTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSE--VM--LKIREGTF--TFPEKDWLNVSPQAE  239 (277)
T ss_dssp             CCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH--HH--HHHHHCCC--CCCHHHHTTSCHHHH
T ss_pred             hccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCHHH--HH--HHHHhCCC--CCCchhhhcCCHHHH
Confidence            33578999988                         8888887643322  00  00111111  0111    2245688


Q ss_pred             HHHHHcccccCCCCCCHHHHHH
Q 039505          308 EIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       308 ~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      +++.+|++.+|++|||+.++++
T Consensus       240 ~li~~~l~~dp~~R~s~~~~l~  261 (277)
T 3f3z_A          240 SLIRRLLTKSPKQRITSLQALE  261 (277)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HHHHHHccCChhhCcCHHHHhc
Confidence            9999999999999999999984

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.77  E-value=4.7e-19  Score=160.26  Aligned_cols=163  Identities=15%  Similarity=0.142  Sum_probs=107.4

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc-------------------EE-EeeCC---cEEE--
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP-------------------IV-ECHVG---ALIT--  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~---~lv~--  211 (342)
                      ++|.  +.||+|+||.||+|....+  .||||+++........+                   ++ ++..+   ++++  
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   86 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   86 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence            4566  8999999999999998744  99999987543222111                   33 44333   3333  


Q ss_pred             E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc--------c
Q 039505          212 I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH--------M  255 (342)
Q Consensus       212 m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~--------~  255 (342)
                      +                          +++||+|||+   .+|+||||||+||+++.+.  ++.+++....        .
T Consensus        87 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~  163 (276)
T 2yex_A           87 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL  163 (276)
T ss_dssp             CTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred             cCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhc
Confidence            1                          8999999999   9999999999999999874  3444333211        1


Q ss_pred             ccccccCcceee---------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHH
Q 039505          256 STTIAGTAGFLN---------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVE  308 (342)
Q Consensus       256 ~~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~  308 (342)
                      .....||+.|+|                           ||+.|+.......  .... ..................+.+
T Consensus       164 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~  240 (276)
T 2yex_A          164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC--QEYS-DWKEKKTYLNPWKKIDSAPLA  240 (276)
T ss_dssp             BCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTS--HHHH-HHHTTCTTSTTGGGSCHHHHH
T ss_pred             ccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHH--HHHH-HhhhcccccCchhhcCHHHHH
Confidence            223568888887                           8888887644321  0000 001100001111233455888


Q ss_pred             HHHHcccccCCCCCCHHHHHH
Q 039505          309 IAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       309 l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ++.+||+.+|++|||+.|+++
T Consensus       241 li~~~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          241 LLHKILVENPSARITIPDIKK  261 (276)
T ss_dssp             HHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHCCCCchhCCCHHHHhc
Confidence            999999999999999999975

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.77  E-value=2.6e-19  Score=165.96  Aligned_cols=107  Identities=17%  Similarity=0.219  Sum_probs=67.0

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------------------cccccccCcceee-----
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------------------MSTTIAGTAGFLN-----  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------------------~~~~~~Gt~~y~a-----  267 (342)
                      +++||+|||+   .+|+||||||+|||++.+  .++.+++....                  ......||+.|+|     
T Consensus       173 i~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  249 (332)
T 3qd2_B          173 IAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIH  249 (332)
T ss_dssp             HHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHHH
T ss_pred             HHHHHHHHHh---CCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccChHHhc
Confidence            7899999999   999999999999999988  34444433211                  1122469999998     


Q ss_pred             ---------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHH
Q 039505          268 ---------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQ  326 (342)
Q Consensus       268 ---------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~e  326 (342)
                                           ||..|........      ........ ..........+.+++.+||+.+|++|||+.|
T Consensus       250 ~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~  322 (332)
T 3qd2_B          250 GNNYSHKVDIFSLGLILFELLYSFSTQMERVRII------TDVRNLKF-PLLFTQKYPQEHMMVQDMLSPSPTERPEATD  322 (332)
T ss_dssp             CCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHHH------HHHHTTCC-CHHHHHHCHHHHHHHHHHHCSSGGGSCCHHH
T ss_pred             CCCCcchhhHHHHHHHHHHHHHcCCChhHHHHHH------HHhhccCC-CcccccCChhHHHHHHHHccCCCCcCCCHHH
Confidence                                 3322221110000      00011111 0111223455788999999999999999999


Q ss_pred             HHH
Q 039505          327 VVM  329 (342)
Q Consensus       327 V~~  329 (342)
                      +++
T Consensus       323 ~l~  325 (332)
T 3qd2_B          323 IIE  325 (332)
T ss_dssp             HHH
T ss_pred             Hhh
Confidence            986

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.77  E-value=3.3e-19  Score=163.86  Aligned_cols=158  Identities=20%  Similarity=0.253  Sum_probs=106.4

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc-------------------EE-EeeCC---cEEE--E-----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP-------------------IV-ECHVG---ALIT--I-----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~---~lv~--m-----  212 (342)
                      +.||+|+||.||+|....+  .||||++.........+                   ++ ++...   ++|+  +     
T Consensus        28 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L  107 (303)
T 3a7i_A           28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSA  107 (303)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEH
T ss_pred             hhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCcH
Confidence            8899999999999998654  99999997664332211                   33 34333   3444  1     


Q ss_pred             --------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc------cccccccCcc
Q 039505          213 --------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH------MSTTIAGTAG  264 (342)
Q Consensus       213 --------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~------~~~~~~Gt~~  264 (342)
                                          +++||.|||+   .+|+||||||+||+++.+.  ++.+++....      ......||+.
T Consensus       108 ~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~  184 (303)
T 3a7i_A          108 LDLLEPGPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF  184 (303)
T ss_dssp             HHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCCCCSCGG
T ss_pred             HHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChheEEECCCCCEEEeecccceecCccccccCccCCCcC
Confidence                                8999999999   9999999999999999884  4444333211      1223568888


Q ss_pred             eee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccC
Q 039505          265 FLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKV  318 (342)
Q Consensus       265 y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P  318 (342)
                      |+|                          ||+.|+...........+ .....+.+    +......+.+++..||+.+|
T Consensus       185 y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~l~~li~~~l~~dp  259 (303)
T 3a7i_A          185 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI-PKNNPPTL----EGNYSKPLKEFVEACLNKEP  259 (303)
T ss_dssp             GCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH-HHSCCCCC----CSSCCHHHHHHHHHHCCSSG
T ss_pred             ccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHh-hcCCCCCC----ccccCHHHHHHHHHHcCCCh
Confidence            988                          888887654322100000 01111122    22233458899999999999


Q ss_pred             CCCCCHHHHHHH
Q 039505          319 NRRPLMNQVVMV  330 (342)
Q Consensus       319 ~~RPsm~eV~~~  330 (342)
                      ++|||+.|+++.
T Consensus       260 ~~Rps~~~ll~~  271 (303)
T 3a7i_A          260 SFRPTAKELLKH  271 (303)
T ss_dssp             GGSCCHHHHTTC
T ss_pred             hhCcCHHHHhhC
Confidence            999999999853

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.77  E-value=1.7e-19  Score=168.97  Aligned_cols=167  Identities=17%  Similarity=0.146  Sum_probs=95.1

Q ss_pred             hhccC---cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc--------------EE-EeeC----C---cEEE-
Q 039505          160 TNNFE---RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP--------------IV-ECHV----G---ALIT-  211 (342)
Q Consensus       160 t~~f~---~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~--------------Lv-~c~~----~---~lv~-  211 (342)
                      .++|.   ++||+|+||+||+|....+  .||||++........+.              ++ ++..    +   ++|+ 
T Consensus        27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e  106 (336)
T 3fhr_A           27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIME  106 (336)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred             cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEe
Confidence            44555   5799999999999999854  99999986532110000              33 3322    1   3333 


Q ss_pred             -E----------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-----CccccCCCCCc---
Q 039505          212 -I----------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-----SRISPVEGGTH---  254 (342)
Q Consensus       212 -m----------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-----a~~~~~~~~~~---  254 (342)
                       +                            +++||+|||+   .+|+||||||+|||++.+     .++.+++....   
T Consensus       107 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~---~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~  183 (336)
T 3fhr_A          107 CMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ  183 (336)
T ss_dssp             CCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC--
T ss_pred             ccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEEecCCCceEEEeccccceeccc
Confidence             1                            8899999999   899999999999999864     34555443321   


Q ss_pred             -cccccccCcceee--------------------------cCCCCccccccccccccccccc--ccccCCCCCChHHHHH
Q 039505          255 -MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKST--VDLSFKGEFDIISVGK  305 (342)
Q Consensus       255 -~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~--~d~~l~~~~~~~~~~~  305 (342)
                       ......||+.|+|                          ||+.|+...............+  ................
T Consensus       184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (336)
T 3fhr_A          184 NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSED  263 (336)
T ss_dssp             --------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCCHH
T ss_pred             cccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHH
Confidence             1233578899988                          9999987654322000000000  0111111112234456


Q ss_pred             HHHHHHHcccccCCCCCCHHHHHH
Q 039505          306 AVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       306 l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      +.+++.+||+.+|++|||+.|+++
T Consensus       264 ~~~li~~~L~~dP~~Rpt~~ell~  287 (336)
T 3fhr_A          264 AKQLIRLLLKTDPTERLTITQFMN  287 (336)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHCCCChhHCcCHHHHhc
Confidence            889999999999999999999986

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.77  E-value=2.8e-19  Score=168.03  Aligned_cols=168  Identities=19%  Similarity=0.237  Sum_probs=103.0

Q ss_pred             hhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC---------cc--------------EE-EeeCC---c
Q 039505          160 TNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH---------VP--------------IV-ECHVG---A  208 (342)
Q Consensus       160 t~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~---------~~--------------Lv-~c~~~---~  208 (342)
                      .+.|.  +.||+|+||.||+|....+  .||||++........         .+              ++ ++...   +
T Consensus         9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   88 (346)
T 1ua2_A            9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNIS   88 (346)
T ss_dssp             ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCE
T ss_pred             hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceE
Confidence            45566  8999999999999998754  999999975432111         11              44 44333   4


Q ss_pred             EEE--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc----
Q 039505          209 LIT--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH----  254 (342)
Q Consensus       209 lv~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~----  254 (342)
                      +|+  +                          +++||+|||+   .+|+||||||+|||++.+.  ++.+++....    
T Consensus        89 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~  165 (346)
T 1ua2_A           89 LVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP  165 (346)
T ss_dssp             EEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC
T ss_pred             EEEEcCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCHHHEEEcCCCCEEEEecccceeccCC
Confidence            444  2                          8899999999   9999999999999999884  3443332211    


Q ss_pred             --cccccccCcceee---------------------------cCCCCcccccccc-cccccc-------cc------ccc
Q 039505          255 --MSTTIAGTAGFLN---------------------------TKNPVISKSIENG-NSHLRD-------KS------TVD  291 (342)
Q Consensus       255 --~~~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~-~~~l~~-------~~------~~d  291 (342)
                        ......||+.|+|                           +|.+|+....... ...+..       ..      ..+
T Consensus       166 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  245 (346)
T 1ua2_A          166 NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPD  245 (346)
T ss_dssp             CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTT
T ss_pred             cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcc
Confidence              1233578899988                           7887776543211 000000       00      000


Q ss_pred             c---cCCCCCC-----hHHHHHHHHHHHHcccccCCCCCCHHHHHHH
Q 039505          292 L---SFKGEFD-----IISVGKAVEIAMASVSSKVNRRPLMNQVVMV  330 (342)
Q Consensus       292 ~---~l~~~~~-----~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~  330 (342)
                      .   .-....+     ......+.+++.+||+.+|++|||+.|+++.
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  292 (346)
T 1ua2_A          246 YVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM  292 (346)
T ss_dssp             CCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             cccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence            0   0000001     1223568899999999999999999999863

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.77  E-value=3.2e-19  Score=162.14  Aligned_cols=171  Identities=19%  Similarity=0.211  Sum_probs=109.5

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc----------c--------------EE-EeeCC---c
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV----------P--------------IV-ECHVG---A  208 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~----------~--------------Lv-~c~~~---~  208 (342)
                      ++|.  +.||+|+||.||+|+....  .||||+++........          +              ++ +|...   +
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV   84 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence            3455  8999999999999999754  9999998765322110          0              44 45444   4


Q ss_pred             EEE--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC------ccccCCCCCc
Q 039505          209 LIT--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS------RISPVEGGTH  254 (342)
Q Consensus       209 lv~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a------~~~~~~~~~~  254 (342)
                      +++  +                          +++||+|||+   .+|+||||||+||+++.+.      ++.+++....
T Consensus        85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~  161 (283)
T 3bhy_A           85 LILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK  161 (283)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred             EEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChHHEEEecCCCCCCceEEEeccccee
Confidence            444  2                          8999999999   9999999999999998763      3444333221


Q ss_pred             -----cccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHH
Q 039505          255 -----MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISV  303 (342)
Q Consensus       255 -----~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~  303 (342)
                           ......||+.|+|                          ||+.|+.......  .+...................
T Consensus       162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  239 (283)
T 3bhy_A          162 IEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE--TLTNISAVNYDFDEEYFSNTS  239 (283)
T ss_dssp             CC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH--HHHHHHTTCCCCCHHHHTTCC
T ss_pred             ccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH--HHHHhHhcccCCcchhcccCC
Confidence                 1123568888988                          8888886543221  000000001111100011223


Q ss_pred             HHHHHHHHHcccccCCCCCCHHHHHH--HHHhccC
Q 039505          304 GKAVEIAMASVSSKVNRRPLMNQVVM--VREQGNG  336 (342)
Q Consensus       304 ~~l~~l~~~Cl~~~P~~RPsm~eV~~--~L~~i~~  336 (342)
                      ..+.+++.+||+.+|++|||+.|+++  .++.++.
T Consensus       240 ~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~  274 (283)
T 3bhy_A          240 ELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRR  274 (283)
T ss_dssp             HHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHH
T ss_pred             HHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHH
Confidence            45889999999999999999999986  4555543

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.77  E-value=8.2e-19  Score=168.02  Aligned_cols=170  Identities=14%  Similarity=0.100  Sum_probs=113.7

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc-------------------EE-EeeCC-----cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP-------------------IV-ECHVG-----ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~-----~lv~--m---  212 (342)
                      ++||+|+||+||+|++..+  .||||+++........+                   ++ ++...     ++|+  +   
T Consensus        15 ~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g   94 (396)
T 4eut_A           15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCG   94 (396)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTTE
T ss_pred             EEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCCC
Confidence            8999999999999999764  99999987543221111                   33 34322     3443  1   


Q ss_pred             --------------------------ehhhhhhhhccCCCCeeeCCCCcceEEe----cCC--CccccCCCCCc-----c
Q 039505          213 --------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILL----NEK--SRISPVEGGTH-----M  255 (342)
Q Consensus       213 --------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILL----d~~--a~~~~~~~~~~-----~  255 (342)
                                                +++||+|||+   .+|+||||||+|||+    +.+  .++.+++....     .
T Consensus        95 ~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~~  171 (396)
T 4eut_A           95 SLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ  171 (396)
T ss_dssp             EHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGGG
T ss_pred             CHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCCc
Confidence                                      8899999999   999999999999998    555  44555443311     1


Q ss_pred             ccccccCcceee----------------------------------cCCCCcccccccc-cccccc----c---------
Q 039505          256 STTIAGTAGFLN----------------------------------TKNPVISKSIENG-NSHLRD----K---------  287 (342)
Q Consensus       256 ~~~~~Gt~~y~a----------------------------------tG~~P~~~~~~~~-~~~l~~----~---------  287 (342)
                      .....||+.|+|                                  ||+.||....... ...+..    .         
T Consensus       172 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~  251 (396)
T 4eut_A          172 FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGV  251 (396)
T ss_dssp             SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEE
T ss_pred             cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhh
Confidence            223568888887                                  8999987543211 000000    0         


Q ss_pred             -cc------ccccC--CCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccCC
Q 039505          288 -ST------VDLSF--KGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNGS  337 (342)
Q Consensus       288 -~~------~d~~l--~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~~  337 (342)
                       ..      ....+  ...........+.+++.+||+.||++||++.|+++.++.+-..
T Consensus       252 ~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~  310 (396)
T 4eut_A          252 QKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR  310 (396)
T ss_dssp             ECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred             eeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence             00      00011  1123456677788999999999999999999999999887543

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.77  E-value=5.2e-19  Score=167.68  Aligned_cols=170  Identities=16%  Similarity=0.195  Sum_probs=110.2

Q ss_pred             HHHHHHHhhccC--cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCCCc------------c---------------E
Q 039505          153 LELSLRVTNNFE--RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQGHV------------P---------------I  201 (342)
Q Consensus       153 ~~~l~~at~~f~--~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~~~------------~---------------L  201 (342)
                      ........++|.  +.||+|+||.||+|++.. + .||||++.........            +               +
T Consensus        86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~  165 (365)
T 2y7j_A           86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITL  165 (365)
T ss_dssp             HHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred             chhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence            334444556677  899999999999999974 5 9999998765422110            0               3


Q ss_pred             E-EeeCC---cEEE--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCc--cc
Q 039505          202 V-ECHVG---ALIT--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSR--IS  247 (342)
Q Consensus       202 v-~c~~~---~lv~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~--~~  247 (342)
                      + ++...   ++|+  +                          ++.||.|||+   .+|+||||||+|||++.+.+  +.
T Consensus       166 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~---~gi~H~Dlkp~NIl~~~~~~ikl~  242 (365)
T 2y7j_A          166 IDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPENILLDDNMQIRLS  242 (365)
T ss_dssp             EEEEEBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEEC
T ss_pred             EEEEeeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEE
Confidence            3 44443   4444  2                          8999999999   89999999999999998844  44


Q ss_pred             cCCCCCc-----cccccccCcceee--------------------------------cCCCCcccccccccccccccccc
Q 039505          248 PVEGGTH-----MSTTIAGTAGFLN--------------------------------TKNPVISKSIENGNSHLRDKSTV  290 (342)
Q Consensus       248 ~~~~~~~-----~~~~~~Gt~~y~a--------------------------------tG~~P~~~~~~~~~~~l~~~~~~  290 (342)
                      +++....     ......||+.|+|                                ||+.||.......   .. ..+.
T Consensus       243 DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~---~~-~~i~  318 (365)
T 2y7j_A          243 DFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQIL---ML-RMIM  318 (365)
T ss_dssp             CCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH---HH-HHHH
T ss_pred             ecCcccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHH---HH-HHHH
Confidence            4432211     1233678999987                                6666665432111   00 0000


Q ss_pred             cccCCCCC--ChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          291 DLSFKGEF--DIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       291 d~~l~~~~--~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ........  .......+.+++.+||+.+|++|||+.|+++
T Consensus       319 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  359 (365)
T 2y7j_A          319 EGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ  359 (365)
T ss_dssp             HTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             hCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            10010000  0112345889999999999999999999986

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.77  E-value=2e-19  Score=169.73  Aligned_cols=160  Identities=18%  Similarity=0.214  Sum_probs=107.1

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCC---CCCc----c--------------EE-EeeCC---cEEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSS---QGHV----P--------------IV-ECHVG---ALIT  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~---~~~~----~--------------Lv-~c~~~---~lv~  211 (342)
                      ++|.  +.||+|+||.||+|+...+  .||||+++....   ....    +              +. ++...   ++|+
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  120 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence            4455  8999999999999998754  999999864321   1100    0              33 33333   3333


Q ss_pred             --E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc---cccc
Q 039505          212 --I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH---MSTT  258 (342)
Q Consensus       212 --m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~---~~~~  258 (342)
                        +                          ++.||+|||+   .+|+||||||+|||++.+.  ++.+++....   ....
T Consensus       121 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~~  197 (350)
T 1rdq_E          121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT  197 (350)
T ss_dssp             ECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCC
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCccceEEECCCCCEEEcccccceeccCCccc
Confidence              1                          8899999999   9999999999999999884  4444443321   2234


Q ss_pred             cccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHH
Q 039505          259 IAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMA  312 (342)
Q Consensus       259 ~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~  312 (342)
                      .+||+.|+|                          ||+.||.......   +. ..+....+  ..+......+.+++.+
T Consensus       198 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~---~~-~~i~~~~~--~~p~~~~~~~~~li~~  271 (350)
T 1rdq_E          198 LCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ---IY-EKIVSGKV--RFPSHFSSDLKDLLRN  271 (350)
T ss_dssp             CEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HH-HHHHHCCC--CCCTTCCHHHHHHHHH
T ss_pred             ccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHH---HH-HHHHcCCC--CCCCCCCHHHHHHHHH
Confidence            689999998                          8999987543221   11 11111111  1122334558899999


Q ss_pred             cccccCCCCCC-----HHHHHH
Q 039505          313 SVSSKVNRRPL-----MNQVVM  329 (342)
Q Consensus       313 Cl~~~P~~RPs-----m~eV~~  329 (342)
                      ||+.+|++||+     +.|+.+
T Consensus       272 lL~~dp~~R~~~~~~~~~ei~~  293 (350)
T 1rdq_E          272 LLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             HSCSCTTTCTTSSTTTTHHHHT
T ss_pred             HhhcCHHhccCCccCCHHHHHh
Confidence            99999999998     777764

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.77  E-value=3.1e-19  Score=169.28  Aligned_cols=114  Identities=6%  Similarity=-0.091  Sum_probs=75.4

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc---cccccccCcceee--------------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH---MSTTIAGTAGFLN--------------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~---~~~~~~Gt~~y~a--------------------  267 (342)
                      +++||+|||+   .+|+||||||+|||++.+.  ++.+++....   ......||+.|+|                    
T Consensus       203 i~~aL~~LH~---~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSl  279 (371)
T 3q60_A          203 LIRLAANLQS---KGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQL  279 (371)
T ss_dssp             HHHHHHHHHH---TTEEETTCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHH
T ss_pred             HHHHHHHHHH---CCCccCcCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHH
Confidence            7889999999   9999999999999999884  4444332211   1113567788988                    


Q ss_pred             --------cCCCCcccccccccccccc---cccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          268 --------TKNPVISKSIENGNSHLRD---KSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       268 --------tG~~P~~~~~~~~~~~l~~---~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                              ||+.||..........+..   ...................+.+++.+||+.+|++|||+.|+++
T Consensus       280 G~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          280 GLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME  352 (371)
T ss_dssp             HHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred             HHHHHHHHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                    8999998764322101110   0111111111111234556889999999999999999999873

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.77  E-value=2e-19  Score=172.30  Aligned_cols=168  Identities=16%  Similarity=0.189  Sum_probs=109.9

Q ss_pred             cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCCcc--------------EE-EeeC------C---cEEE--E-----
Q 039505          165 RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGHVP--------------IV-ECHV------G---ALIT--I-----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~~~--------------Lv-~c~~------~---~lv~--m-----  212 (342)
                      ++||+|+||+||+|++..+ .||+|++........++              +. ++..      .   ++|+  +     
T Consensus        46 ~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~  125 (394)
T 4e7w_A           46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVY  125 (394)
T ss_dssp             EEEEEETTEEEEEEEETTTEEEEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCSEEHH
T ss_pred             EEEeeCCCeEEEEEEECCCCeEEEEEEecCcchHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccCccHH
Confidence            8999999999999999877 89999886654333333              44 3311      1   2333  1     


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEec-CC--CccccCCCCCc-----cccccc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLN-EK--SRISPVEGGTH-----MSTTIA  260 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd-~~--a~~~~~~~~~~-----~~~~~~  260 (342)
                                              +++||+|||+   .+|+||||||+|||++ .+  .++.+++....     ......
T Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~~~~~~  202 (394)
T 4e7w_A          126 RASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSYI  202 (394)
T ss_dssp             HHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSSC
T ss_pred             HHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCCCCcccc
Confidence                                    8899999999   9999999999999998 45  45555443321     123357


Q ss_pred             cCcceee---------------------------cCCCCcccccccc-cccccc--------------cccccccCC---
Q 039505          261 GTAGFLN---------------------------TKNPVISKSIENG-NSHLRD--------------KSTVDLSFK---  295 (342)
Q Consensus       261 Gt~~y~a---------------------------tG~~P~~~~~~~~-~~~l~~--------------~~~~d~~l~---  295 (342)
                      ||+.|+|                           ||+.||....... ...++.              .......+.   
T Consensus       203 ~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~  282 (394)
T 4e7w_A          203 CSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIR  282 (394)
T ss_dssp             SCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCC
T ss_pred             cCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhcccccc
Confidence            8999998                           8999987654221 000000              000111110   


Q ss_pred             CC-----CChHHHHHHHHHHHHcccccCCCCCCHHHHHHH--HHhcc
Q 039505          296 GE-----FDIISVGKAVEIAMASVSSKVNRRPLMNQVVMV--REQGN  335 (342)
Q Consensus       296 ~~-----~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~--L~~i~  335 (342)
                      ..     ........+.+++.+||+.+|++|||+.|+++.  +++++
T Consensus       283 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  329 (394)
T 4e7w_A          283 PHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELR  329 (394)
T ss_dssp             CCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTT
T ss_pred             CCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhc
Confidence            00     111234568899999999999999999999853  44443

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.77  E-value=5.6e-19  Score=166.37  Aligned_cols=159  Identities=18%  Similarity=0.229  Sum_probs=104.1

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc----------------------EE-EeeCC---cEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP----------------------IV-ECHVG---ALI  210 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~----------------------Lv-~c~~~---~lv  210 (342)
                      ++|.  +.||+|+||.||+|+...+  .||||+++.........                      +. ++...   ++|
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv   88 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV   88 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence            3455  8999999999999999765  89999997653221110                      33 33333   344


Q ss_pred             E--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCC------c
Q 039505          211 T--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGT------H  254 (342)
Q Consensus       211 ~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~------~  254 (342)
                      +  +                          ++.||+|||+   .+|+||||||+|||++.+.  ++.+++...      .
T Consensus        89 ~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~  165 (345)
T 3a8x_A           89 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD  165 (345)
T ss_dssp             ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTC
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEEeccccccccCCCC
Confidence            3  1                          8899999999   9999999999999999883  444433221      1


Q ss_pred             cccccccCcceee--------------------------cCCCCcccccccc-----cccccccccccccCCCCCChHHH
Q 039505          255 MSTTIAGTAGFLN--------------------------TKNPVISKSIENG-----NSHLRDKSTVDLSFKGEFDIISV  303 (342)
Q Consensus       255 ~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~-----~~~l~~~~~~d~~l~~~~~~~~~  303 (342)
                      .....+||+.|+|                          ||+.||.......     ........+....+  ..+....
T Consensus       166 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~--~~p~~~s  243 (345)
T 3a8x_A          166 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI--RIPRSLS  243 (345)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC--CCCTTSC
T ss_pred             cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC--CCCCCCC
Confidence            2334689999998                          9999986532110     00000011111111  1222334


Q ss_pred             HHHHHHHHHcccccCCCCCCH
Q 039505          304 GKAVEIAMASVSSKVNRRPLM  324 (342)
Q Consensus       304 ~~l~~l~~~Cl~~~P~~RPsm  324 (342)
                      ..+.+++.+||+.+|++||++
T Consensus       244 ~~~~~li~~lL~~dP~~R~~~  264 (345)
T 3a8x_A          244 VKAASVLKSFLNKDPKERLGC  264 (345)
T ss_dssp             HHHHHHHHHHTCSSTTTSTTC
T ss_pred             HHHHHHHHHHhcCCHhHCCCC
Confidence            558889999999999999985

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.77  E-value=5.1e-19  Score=167.35  Aligned_cols=162  Identities=14%  Similarity=0.111  Sum_probs=106.7

Q ss_pred             hccC--cccCcCCCeeEEEEE------ECCC-eEEEEEccCCCCCCCcc------------------EE-EeeCC---cE
Q 039505          161 NNFE--RVPYKGGFITVYHGQ------LVKS-EVAMKMLSPSSSQGHVP------------------IV-ECHVG---AL  209 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~------~~~~-~vAVK~l~~~~~~~~~~------------------Lv-~c~~~---~l  209 (342)
                      +.|.  +.||+|+||+||+|.      ...+ .||||+++.........                  +. +|...   ++
T Consensus        65 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~l  144 (365)
T 3e7e_A           65 KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVL  144 (365)
T ss_dssp             SEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEE
T ss_pred             EEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEE
Confidence            4455  899999999999994      2334 89999997653211100                  22 33222   44


Q ss_pred             EE--E-------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecC-----------C--
Q 039505          210 IT--I-------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNE-----------K--  243 (342)
Q Consensus       210 v~--m-------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~-----------~--  243 (342)
                      |+  +                               +++||+|||+   .+|+||||||+|||++.           +  
T Consensus       145 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~---~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~  221 (365)
T 3e7e_A          145 VGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD---CEIIHGDIKPDNFILGNGFLEQDDEDDLSAG  221 (365)
T ss_dssp             EECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECGGGTCC------CTT
T ss_pred             EEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEecccccCccccccccCC
Confidence            44  1                               8999999999   99999999999999987           4  


Q ss_pred             CccccCCCCC--------ccccccccCcceee--------------------------cCCCCccccccccccccccccc
Q 039505          244 SRISPVEGGT--------HMSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKST  289 (342)
Q Consensus       244 a~~~~~~~~~--------~~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~  289 (342)
                      .++.+++...        ......+||++|+|                          ||+.|+.......       ..
T Consensus       222 ~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-------~~  294 (365)
T 3e7e_A          222 LALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE-------CK  294 (365)
T ss_dssp             EEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE-------EE
T ss_pred             EEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc-------ee
Confidence            4555554431        12234679999999                          8888876543322       01


Q ss_pred             ccccCCCCCChHHHHHHHHHHHHcccccCCCC-CCHHHHHHHHHhcc
Q 039505          290 VDLSFKGEFDIISVGKAVEIAMASVSSKVNRR-PLMNQVVMVREQGN  335 (342)
Q Consensus       290 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~R-Psm~eV~~~L~~i~  335 (342)
                      .+..+.....   ...+.++...|++.+|.+| |++.++.+.|+++-
T Consensus       295 ~~~~~~~~~~---~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l  338 (365)
T 3e7e_A          295 PEGLFRRLPH---LDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVF  338 (365)
T ss_dssp             ECSCCTTCSS---HHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHH
T ss_pred             echhccccCc---HHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHH
Confidence            1122222222   3345677778999999999 57888888777653

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.77  E-value=5.1e-19  Score=163.47  Aligned_cols=159  Identities=19%  Similarity=0.229  Sum_probs=103.9

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc-------------------EE-EeeCC---cEEE--E-----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP-------------------IV-ECHVG---ALIT--I-----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~---~lv~--m-----  212 (342)
                      ++||+|+||+||+|....+  .||||++..........                   ++ ++...   ++|+  +     
T Consensus        19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   98 (316)
T 2ac3_A           19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI   98 (316)
T ss_dssp             CCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred             ceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcH
Confidence            6799999999999997644  99999997654322111                   34 44333   3443  2     


Q ss_pred             ---------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-----CccccCCCCCcc-----------
Q 039505          213 ---------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-----SRISPVEGGTHM-----------  255 (342)
Q Consensus       213 ---------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-----a~~~~~~~~~~~-----------  255 (342)
                                           +++||+|||+   .+|+||||||+|||++.+     .++.+++.....           
T Consensus        99 ~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  175 (316)
T 2ac3_A           99 LSHIHKRRHFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPIST  175 (316)
T ss_dssp             HHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------------
T ss_pred             HHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccccccc
Confidence                                 8999999999   899999999999999976     344544433211           


Q ss_pred             --ccccccCcceee-------------------------------cCCCCcccccccccc------------cccccccc
Q 039505          256 --STTIAGTAGFLN-------------------------------TKNPVISKSIENGNS------------HLRDKSTV  290 (342)
Q Consensus       256 --~~~~~Gt~~y~a-------------------------------tG~~P~~~~~~~~~~------------~l~~~~~~  290 (342)
                        .....||+.|+|                               ||+.||.........            .+. ..+.
T Consensus       176 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~~i~  254 (316)
T 2ac3_A          176 PELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLF-ESIQ  254 (316)
T ss_dssp             ------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHH-HHHH
T ss_pred             cccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHH-HHHh
Confidence              112458888987                               899998765322100            000 0111


Q ss_pred             cccCCCCCCh----HHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          291 DLSFKGEFDI----ISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       291 d~~l~~~~~~----~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ....  ..+.    .....+.+++.+||+.||++|||+.|+++
T Consensus       255 ~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  295 (316)
T 2ac3_A          255 EGKY--EFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ  295 (316)
T ss_dssp             HCCC--CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             ccCc--ccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence            1111  1111    12346889999999999999999999986

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.77  E-value=1.9e-19  Score=184.01  Aligned_cols=159  Identities=19%  Similarity=0.225  Sum_probs=107.6

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCC---CCCCcc-------------------EE-EeeCC---cEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSS---SQGHVP-------------------IV-ECHVG---ALI  210 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~---~~~~~~-------------------Lv-~c~~~---~lv  210 (342)
                      ++|.  ++||+|+||+||+|+...+  .||||+++...   ......                   +. ++...   ++|
T Consensus       341 ~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV  420 (674)
T 3pfq_A          341 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV  420 (674)
T ss_dssp             TTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEE
T ss_pred             cceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEE
Confidence            4555  7999999999999998765  89999986431   111100                   22 22222   344


Q ss_pred             E--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCC------c
Q 039505          211 T--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGT------H  254 (342)
Q Consensus       211 ~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~------~  254 (342)
                      +  +                          ++.||+|||+   .+||||||||+||||+.+  .++.+++...      .
T Consensus       421 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~---~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~  497 (674)
T 3pfq_A          421 MEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV  497 (674)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTC
T ss_pred             EeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeccCChhhEEEcCCCcEEEeecceeeccccCCc
Confidence            4  2                          8999999999   999999999999999988  4444444321      1


Q ss_pred             cccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHH
Q 039505          255 MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVE  308 (342)
Q Consensus       255 ~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~  308 (342)
                      .....+||+.|+|                          ||+.||.......   +. ..+....+  .++.....++.+
T Consensus       498 ~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~---~~-~~i~~~~~--~~p~~~s~~~~~  571 (674)
T 3pfq_A          498 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE---LF-QSIMEHNV--AYPKSMSKEAVA  571 (674)
T ss_dssp             CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HH-HHHHSSCC--CCCTTSCHHHHH
T ss_pred             ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHH---HH-HHHHhCCC--CCCccCCHHHHH
Confidence            2344789999999                          8999998654322   11 11111111  122334456889


Q ss_pred             HHHHcccccCCCCCCH-----HHHH
Q 039505          309 IAMASVSSKVNRRPLM-----NQVV  328 (342)
Q Consensus       309 l~~~Cl~~~P~~RPsm-----~eV~  328 (342)
                      ++..||+.+|++||++     .||.
T Consensus       572 li~~lL~~dP~~R~~~~~~~~~ei~  596 (674)
T 3pfq_A          572 ICKGLMTKHPGKRLGCGPEGERDIK  596 (674)
T ss_dssp             HHHHHSCSSSTTCTTCSTTHHHHHH
T ss_pred             HHHHHccCCHHHCCCCCCCcHHHHh
Confidence            9999999999999997     6665

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.77  E-value=1.3e-19  Score=168.59  Aligned_cols=170  Identities=18%  Similarity=0.117  Sum_probs=110.0

Q ss_pred             cccCcCCCeeEEEEEEC-----CC-eEEEEEccCCCCCCCcc------------------EE-EeeCC-----cEEE--E
Q 039505          165 RVPYKGGFITVYHGQLV-----KS-EVAMKMLSPSSSQGHVP------------------IV-ECHVG-----ALIT--I  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~-----~~-~vAVK~l~~~~~~~~~~------------------Lv-~c~~~-----~lv~--m  212 (342)
                      +.||+|+||.||+|++.     ++ .||||++........+.                  ++ +|...     ++|+  +
T Consensus        47 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~  126 (326)
T 2w1i_A           47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL  126 (326)
T ss_dssp             EEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEECCC
T ss_pred             eeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEECC
Confidence            89999999999999852     34 89999997653221111                  33 33321     3444  1


Q ss_pred             ---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc--------
Q 039505          213 ---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM--------  255 (342)
Q Consensus       213 ---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~--------  255 (342)
                                                 +++||+|||+   .+|+||||||+|||++.+  .++.+++.....        
T Consensus       127 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~  203 (326)
T 2w1i_A          127 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYK  203 (326)
T ss_dssp             TTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSEEE
T ss_pred             CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEEcCCCcEEEecCcchhhccccccccc
Confidence                                       8999999999   999999999999999987  344444332111        


Q ss_pred             -ccccccCcceee--------------------------cCCCCcccccccccc--------cccc---cccccccCCCC
Q 039505          256 -STTIAGTAGFLN--------------------------TKNPVISKSIENGNS--------HLRD---KSTVDLSFKGE  297 (342)
Q Consensus       256 -~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~--------~l~~---~~~~d~~l~~~  297 (342)
                       .....++..|+|                          ||+.|+.........        ....   .+.+.......
T Consensus       204 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (326)
T 2w1i_A          204 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP  283 (326)
T ss_dssp             CSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCC
T ss_pred             cccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCCCC
Confidence             112346677887                          888887643111000        0000   01111111112


Q ss_pred             CChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccCC
Q 039505          298 FDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNGS  337 (342)
Q Consensus       298 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~~  337 (342)
                      .+......+.+++.+||+.+|++|||+.|+++.|+.+++.
T Consensus       284 ~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~  323 (326)
T 2w1i_A          284 RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ  323 (326)
T ss_dssp             CCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence            2334456688999999999999999999999999988753

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.77  E-value=1.6e-18  Score=158.35  Aligned_cols=157  Identities=22%  Similarity=0.332  Sum_probs=104.7

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc------------------EE-EeeCC---cEEE--E------
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP------------------IV-ECHVG---ALIT--I------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~------------------Lv-~c~~~---~lv~--m------  212 (342)
                      .+||+|+||.||+|....+  .||||++..........                  ++ ++...   ++++  +      
T Consensus        28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~  107 (295)
T 2clq_A           28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS  107 (295)
T ss_dssp             CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHH
T ss_pred             EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHH
Confidence            5899999999999998655  89999997654332221                  34 44333   3333  1      


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecC-C--CccccCCCCCc------cccccc
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNE-K--SRISPVEGGTH------MSTTIA  260 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~-~--a~~~~~~~~~~------~~~~~~  260 (342)
                                             +++||+|||+   .+|+||||||+|||++. +  .++.+++....      ......
T Consensus       108 ~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  184 (295)
T 2clq_A          108 ALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT  184 (295)
T ss_dssp             HHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----CCCC
T ss_pred             HHHHhhccCCCccHHHHHHHHHHHHHHHHHHHh---CCEEccCCChhhEEEECCCCCEEEeecccccccCCCCCcccccC
Confidence                                   8899999999   99999999999999987 4  44444443221      122356


Q ss_pred             cCcceee----------------------------cCCCCcccccccccccccc--cccccccCCCCCChHHHHHHHHHH
Q 039505          261 GTAGFLN----------------------------TKNPVISKSIENGNSHLRD--KSTVDLSFKGEFDIISVGKAVEIA  310 (342)
Q Consensus       261 Gt~~y~a----------------------------tG~~P~~~~~~~~~~~l~~--~~~~d~~l~~~~~~~~~~~l~~l~  310 (342)
                      ||+.|+|                            ||+.|+........ ....  .....+.+    +......+.+++
T Consensus       185 ~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~li  259 (295)
T 2clq_A          185 GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQA-AMFKVGMFKVHPEI----PESMSAEAKAFI  259 (295)
T ss_dssp             CCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHH-HHHHHHHHCCCCCC----CTTSCHHHHHHH
T ss_pred             CCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhH-HHHhhccccccccc----cccCCHHHHHHH
Confidence            8888887                            88888865432110 0000  11112222    233345688999


Q ss_pred             HHcccccCCCCCCHHHHHH
Q 039505          311 MASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       311 ~~Cl~~~P~~RPsm~eV~~  329 (342)
                      .+||+.+|++|||+.++++
T Consensus       260 ~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          260 LKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             HHTTCSSTTTSCCHHHHHT
T ss_pred             HHHccCChhhCCCHHHHhc
Confidence            9999999999999999985

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.77  E-value=2.1e-19  Score=169.73  Aligned_cols=164  Identities=20%  Similarity=0.247  Sum_probs=106.6

Q ss_pred             hccC--cccCcCCCeeEEEEEEC----CC-eEEEEEccCCCC--------CCCcc---------------EE-EeeCC--
Q 039505          161 NNFE--RVPYKGGFITVYHGQLV----KS-EVAMKMLSPSSS--------QGHVP---------------IV-ECHVG--  207 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~----~~-~vAVK~l~~~~~--------~~~~~---------------Lv-~c~~~--  207 (342)
                      ++|.  +.||+|+||.||+|+..    .+ .||||+++....        ....+               +. ++...  
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  133 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  133 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence            4565  89999999999999983    34 999999864321        01111               33 33332  


Q ss_pred             -cEEE--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCccccCCCCCc----
Q 039505          208 -ALIT--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH----  254 (342)
Q Consensus       208 -~lv~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~~~~~~~~~~----  254 (342)
                       ++|+  +                          +++||+|||+   .+|+||||||+|||++.+.++...+++..    
T Consensus       134 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~  210 (355)
T 1vzo_A          134 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV  210 (355)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred             EEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence             4444  2                          8999999999   89999999999999998843333333311    


Q ss_pred             -----cccccccCcceee----------------------------cCCCCccccccccc-ccccccccccccCCCCCCh
Q 039505          255 -----MSTTIAGTAGFLN----------------------------TKNPVISKSIENGN-SHLRDKSTVDLSFKGEFDI  300 (342)
Q Consensus       255 -----~~~~~~Gt~~y~a----------------------------tG~~P~~~~~~~~~-~~l~~~~~~d~~l~~~~~~  300 (342)
                           ......||+.|+|                            ||+.||........ ..+. ..+...  ....+.
T Consensus       211 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~-~~~~~~--~~~~~~  287 (355)
T 1vzo_A          211 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEIS-RRILKS--EPPYPQ  287 (355)
T ss_dssp             GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHH-HHHHHC--CCCCCT
T ss_pred             cCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHH-HHHhcc--CCCCCc
Confidence                 1223579999998                            88888865432210 0010 111110  111223


Q ss_pred             HHHHHHHHHHHHcccccCCCCC-----CHHHHHHH
Q 039505          301 ISVGKAVEIAMASVSSKVNRRP-----LMNQVVMV  330 (342)
Q Consensus       301 ~~~~~l~~l~~~Cl~~~P~~RP-----sm~eV~~~  330 (342)
                      .....+.+++.+||+.+|++||     ++.|+++.
T Consensus       288 ~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h  322 (355)
T 1vzo_A          288 EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH  322 (355)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred             ccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence            3345588999999999999999     89998754

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.77  E-value=4e-19  Score=164.98  Aligned_cols=164  Identities=20%  Similarity=0.245  Sum_probs=105.3

Q ss_pred             hhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCC-----C-------Ccc--------------EE-EeeCC-
Q 039505          160 TNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQ-----G-------HVP--------------IV-ECHVG-  207 (342)
Q Consensus       160 t~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~-----~-------~~~--------------Lv-~c~~~-  207 (342)
                      .++|.  +.||+|+||.||+|....+  .||||++......     .       ..+              ++ ++... 
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   88 (322)
T 2ycf_A            9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED   88 (322)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred             hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence            34566  8999999999999998765  9999998754211     0       001              34 44433 


Q ss_pred             -cEEE--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-----CccccCCCCC
Q 039505          208 -ALIT--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-----SRISPVEGGT  253 (342)
Q Consensus       208 -~lv~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-----a~~~~~~~~~  253 (342)
                       ++|+  +                          +++||+|||+   .+|+||||||+|||++.+     .++.+++...
T Consensus        89 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~  165 (322)
T 2ycf_A           89 YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK  165 (322)
T ss_dssp             EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSSSCCEEECCCTTCE
T ss_pred             eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEecCCCCCeEEEccCccce
Confidence             4444  1                          8899999999   999999999999999865     3344444332


Q ss_pred             cc-----ccccccCcceee-----------------------------cCCCCcccccccccccccccccccccCC--CC
Q 039505          254 HM-----STTIAGTAGFLN-----------------------------TKNPVISKSIENGNSHLRDKSTVDLSFK--GE  297 (342)
Q Consensus       254 ~~-----~~~~~Gt~~y~a-----------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~--~~  297 (342)
                      ..     .....||+.|+|                             ||+.|+.......  .+.. .+......  ..
T Consensus       166 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~-~~~~~~~~~~~~  242 (322)
T 2ycf_A          166 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKD-QITSGKYNFIPE  242 (322)
T ss_dssp             ECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS--CHHH-HHHHTCCCCCHH
T ss_pred             ecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH--HHHH-HHHhCccccCch
Confidence            11     123568888887                             7888876543221  1111 00000000  00


Q ss_pred             CChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          298 FDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       298 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ........+.+++.+||+.+|++|||+.++++
T Consensus       243 ~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          243 VWAEVSEKALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             hhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence            01122456889999999999999999999874

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.77  E-value=3.4e-19  Score=164.70  Aligned_cols=163  Identities=15%  Similarity=0.195  Sum_probs=105.4

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCCc------c----------------EE-EeeCC---cEEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGHV------P----------------IV-ECHVG---ALIT  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~~------~----------------Lv-~c~~~---~lv~  211 (342)
                      +.|.  +.||+|+||.||+|...++ .||||++.........      +                ++ ++...   ++++
T Consensus        28 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~  107 (313)
T 3cek_A           28 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM  107 (313)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEE
T ss_pred             ceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEE
Confidence            3455  8999999999999998877 9999999764322110      0                34 45444   3333


Q ss_pred             -E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-CccccCCCCCcc--------
Q 039505          212 -I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-SRISPVEGGTHM--------  255 (342)
Q Consensus       212 -m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-a~~~~~~~~~~~--------  255 (342)
                       .                          +++||+|||+   .+|+||||||+|||+++. .++.+++.....        
T Consensus       108 e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~kL~Dfg~~~~~~~~~~~~~  184 (313)
T 3cek_A          108 ECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVV  184 (313)
T ss_dssp             CCCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEETTEEEECCCSSSCC---------
T ss_pred             ecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEEECCeEEEeeccccccccCcccccc
Confidence             1                          8999999999   899999999999999876 555554433211        


Q ss_pred             ccccccCcceee-------------------------------------cCCCCcccccccccccccccccccccCCCCC
Q 039505          256 STTIAGTAGFLN-------------------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEF  298 (342)
Q Consensus       256 ~~~~~Gt~~y~a-------------------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~  298 (342)
                      .....||+.|+|                                     ||+.|+.......  ... ....++......
T Consensus       185 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~--~~~-~~~~~~~~~~~~  261 (313)
T 3cek_A          185 KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI--SKL-HAIIDPNHEIEF  261 (313)
T ss_dssp             -----CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH--HHH-HHHHCTTSCCCC
T ss_pred             ccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHH--HHH-HHHHhcccccCC
Confidence            123467888876                                     6666665432111  000 112222222222


Q ss_pred             ChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          299 DIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       299 ~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      +......+.+++.+||+.+|++|||+.|+++
T Consensus       262 ~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  292 (313)
T 3cek_A          262 PDIPEKDLQDVLKCCLKRDPKQRISIPELLA  292 (313)
T ss_dssp             CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence            2233456888999999999999999999985

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.77  E-value=4e-19  Score=165.14  Aligned_cols=166  Identities=14%  Similarity=0.203  Sum_probs=106.5

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-c---------------EE-EeeC--C---cEEE--E
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-P---------------IV-ECHV--G---ALIT--I  212 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-~---------------Lv-~c~~--~---~lv~--m  212 (342)
                      ++|.  +.||+|+||+||+|+...+  .||||+++........ +               +. ++..  .   ++++  +
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~  115 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHV  115 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECC
T ss_pred             CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEecc
Confidence            3455  8999999999999998654  9999999754321110 0               44 4443  2   4444  1


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC---CccccCCCCCc-----ccccccc
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK---SRISPVEGGTH-----MSTTIAG  261 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~---a~~~~~~~~~~-----~~~~~~G  261 (342)
                                             +++||+|||+   .+|+||||||+|||++.+   .++.+++....     ......|
T Consensus       116 ~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  192 (330)
T 3nsz_A          116 NNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVA  192 (330)
T ss_dssp             CCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCCS
T ss_pred             CchhHHHHHHhCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCccccccc
Confidence                                   8899999999   999999999999999866   34444443321     1223568


Q ss_pred             Ccceee---------------------------cCCCCcccccccc--cccccc--------------ccccc-------
Q 039505          262 TAGFLN---------------------------TKNPVISKSIENG--NSHLRD--------------KSTVD-------  291 (342)
Q Consensus       262 t~~y~a---------------------------tG~~P~~~~~~~~--~~~l~~--------------~~~~d-------  291 (342)
                      |..|+|                           ||+.|+.......  ...+..              ....+       
T Consensus       193 ~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (330)
T 3nsz_A          193 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDIL  272 (330)
T ss_dssp             CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHH
T ss_pred             cccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhh
Confidence            888887                           8998885432211  000000              00000       


Q ss_pred             ---------ccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          292 ---------LSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       292 ---------~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                               ..............+.+++.+||+.||++|||+.|+++
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  319 (330)
T 3nsz_A          273 GRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  319 (330)
T ss_dssp             CCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             hhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence                     00111111223566889999999999999999999986

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.77  E-value=3.5e-19  Score=174.85  Aligned_cols=164  Identities=20%  Similarity=0.198  Sum_probs=107.8

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc--c-------------------EE-EeeCC---cEEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV--P-------------------IV-ECHVG---ALIT  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~--~-------------------Lv-~c~~~---~lv~  211 (342)
                      +.|.  +.||+|+||+||+|+...+  .||||++.........  +                   ++ ++...   ++|+
T Consensus        26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  105 (484)
T 3nyv_A           26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG  105 (484)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            3454  8999999999999998744  9999999765322111  1                   44 44443   3333


Q ss_pred             --E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecC---C--CccccCCCCC-----
Q 039505          212 --I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNE---K--SRISPVEGGT-----  253 (342)
Q Consensus       212 --m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~---~--a~~~~~~~~~-----  253 (342)
                        +                          +++||+|||+   .+|+||||||+|||++.   +  .++.+++...     
T Consensus       106 e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~  182 (484)
T 3nyv_A          106 EVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS  182 (484)
T ss_dssp             CCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCC
T ss_pred             ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccc
Confidence              1                          8999999999   99999999999999953   3  3444433211     


Q ss_pred             ccccccccCcceee-------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHH
Q 039505          254 HMSTTIAGTAGFLN-------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVE  308 (342)
Q Consensus       254 ~~~~~~~Gt~~y~a-------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~  308 (342)
                      .......||++|+|                         ||+.||...........+......  ...+........+.+
T Consensus       183 ~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~  260 (484)
T 3nyv_A          183 KKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT--FELPQWKKVSESAKD  260 (484)
T ss_dssp             CSHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC--CCSGGGGGSCHHHHH
T ss_pred             cccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCC--CCCcccccCCHHHHH
Confidence            11233579999998                         899998765432200000011111  111111233456889


Q ss_pred             HHHHcccccCCCCCCHHHHHH
Q 039505          309 IAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       309 l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ++.+||+.+|++|||+.|+++
T Consensus       261 li~~~L~~dp~~R~s~~e~l~  281 (484)
T 3nyv_A          261 LIRKMLTYVPSMRISARDALD  281 (484)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHCCCChhHCcCHHHHhh
Confidence            999999999999999999984

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.77  E-value=2.6e-19  Score=166.71  Aligned_cols=160  Identities=21%  Similarity=0.230  Sum_probs=106.8

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCC---CCCc----c--------------EE-EeeCC---cEEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSS---QGHV----P--------------IV-ECHVG---ALIT  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~---~~~~----~--------------Lv-~c~~~---~lv~  211 (342)
                      ++|.  +.||+|+||+||+|+...+  .||||+++....   ....    +              ++ ++...   ++|+
T Consensus         6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~   85 (318)
T 1fot_A            6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   85 (318)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence            4565  8999999999999998754  999999865311   1000    0              33 33333   3333


Q ss_pred             --E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc---cccc
Q 039505          212 --I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH---MSTT  258 (342)
Q Consensus       212 --m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~---~~~~  258 (342)
                        +                          ++.||+|||+   .+|+||||||+|||++.+.  ++.+++....   ....
T Consensus        86 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~~  162 (318)
T 1fot_A           86 DYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYT  162 (318)
T ss_dssp             CCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCC
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChheEEEcCCCCEEEeecCcceecCCcccc
Confidence              1                          8899999999   9999999999999999884  4444433221   2234


Q ss_pred             cccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHH
Q 039505          259 IAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMA  312 (342)
Q Consensus       259 ~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~  312 (342)
                      .+||+.|+|                          ||+.||.......   .. ..+....+  ..+......+.+++.+
T Consensus       163 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~-~~i~~~~~--~~p~~~~~~~~~li~~  236 (318)
T 1fot_A          163 LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK---TY-EKILNAEL--RFPPFFNEDVKDLLSR  236 (318)
T ss_dssp             CCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH---HH-HHHHHCCC--CCCTTSCHHHHHHHHH
T ss_pred             ccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH---HH-HHHHhCCC--CCCCCCCHHHHHHHHH
Confidence            689999998                          8888887543221   00 11111111  1122233458889999


Q ss_pred             cccccCCCCC-----CHHHHHH
Q 039505          313 SVSSKVNRRP-----LMNQVVM  329 (342)
Q Consensus       313 Cl~~~P~~RP-----sm~eV~~  329 (342)
                      |++.+|++||     ++.++++
T Consensus       237 lL~~dp~~R~~~~~~~~~~i~~  258 (318)
T 1fot_A          237 LITRDLSQRLGNLQNGTEDVKN  258 (318)
T ss_dssp             HTCSCTTTCTTSSTTTTHHHHT
T ss_pred             HhccCHHHcCCCcCCCHHHHhc
Confidence            9999999999     8888863

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.77  E-value=7.9e-20  Score=170.50  Aligned_cols=162  Identities=17%  Similarity=0.222  Sum_probs=105.5

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc------c--------------EE-EeeCC---cEEE--E----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV------P--------------IV-ECHVG---ALIT--I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~------~--------------Lv-~c~~~---~lv~--m----  212 (342)
                      +.||+|+||.||+|+...+  .||||++.........      +              ++ +|...   ++|+  +    
T Consensus        31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~  110 (331)
T 4aaa_A           31 GLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTI  110 (331)
T ss_dssp             EEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEH
T ss_pred             eEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcch
Confidence            7999999999999999764  9999998655432211      1              44 55444   4444  1    


Q ss_pred             ----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------cccccccC
Q 039505          213 ----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIAGT  262 (342)
Q Consensus       213 ----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~Gt  262 (342)
                                            +++||+|||+   .+|+||||||+|||++.+  .++.+++....      ......||
T Consensus       111 l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t  187 (331)
T 4aaa_A          111 LDDLELFPNGLDYQVVQKYLFQIINGIGFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVAT  187 (331)
T ss_dssp             HHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCTTC------------CCCC
T ss_pred             HHHHHhhccCCCHHHHHHHHHHHHHHHHHHHH---CCEEccCcChheEEEcCCCcEEEEeCCCceeecCCccccCCCcCC
Confidence                                  8899999999   999999999999999988  44444443321      12235688


Q ss_pred             cceee---------------------------cCCCCcccccccc-cccccc-------------------cccccccCC
Q 039505          263 AGFLN---------------------------TKNPVISKSIENG-NSHLRD-------------------KSTVDLSFK  295 (342)
Q Consensus       263 ~~y~a---------------------------tG~~P~~~~~~~~-~~~l~~-------------------~~~~d~~l~  295 (342)
                      ++|+|                           ||+.||....... ...+..                   .....+.+.
T Consensus       188 ~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (331)
T 4aaa_A          188 RWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIK  267 (331)
T ss_dssp             CTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCS
T ss_pred             ccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCcccc
Confidence            88887                           8888887643221 000000                   001111111


Q ss_pred             CCCC-----hHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          296 GEFD-----IISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       296 ~~~~-----~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ...+     ......+.+++.+||+.+|++|||+.|+++
T Consensus       268 ~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  306 (331)
T 4aaa_A          268 EREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH  306 (331)
T ss_dssp             SCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             ccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            1111     123456889999999999999999999874

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.77  E-value=1.1e-18  Score=169.19  Aligned_cols=87  Identities=21%  Similarity=0.268  Sum_probs=63.6

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc------c--------------EE-EeeCC--------
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV------P--------------IV-ECHVG--------  207 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~------~--------------Lv-~c~~~--------  207 (342)
                      ++|.  +.||+|+||+||+|+...+  .||||++.........      +              ++ ++...        
T Consensus        26 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~  105 (432)
T 3n9x_A           26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDEL  105 (432)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred             CCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeE
Confidence            4455  8999999999999998765  8999999754322111      1              33 33221        


Q ss_pred             cEEE--E-------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCC
Q 039505          208 ALIT--I-------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVE  250 (342)
Q Consensus       208 ~lv~--m-------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~  250 (342)
                      ++|+  +                         +++||.|||+   .+|+||||||+|||++.+  .++.+++
T Consensus       106 ~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~---~givHrDlkp~NILl~~~~~~kL~DFG  174 (432)
T 3n9x_A          106 YIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFG  174 (432)
T ss_dssp             EEEEECCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred             EEEEecCCcCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHeEECCCCCEEEccCC
Confidence            4444  2                         8999999999   899999999999999988  3444443

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.77  E-value=9.9e-19  Score=163.15  Aligned_cols=160  Identities=23%  Similarity=0.302  Sum_probs=105.0

Q ss_pred             hccC--cccCcCCCeeEEEEEEC----CC-eEEEEEccCCCCCC--------Ccc--------------EE-EeeCC---
Q 039505          161 NNFE--RVPYKGGFITVYHGQLV----KS-EVAMKMLSPSSSQG--------HVP--------------IV-ECHVG---  207 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~----~~-~vAVK~l~~~~~~~--------~~~--------------Lv-~c~~~---  207 (342)
                      ++|.  +.||+|+||.||+++..    .+ .||||+++......        ..+              ++ ++..+   
T Consensus        17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   96 (327)
T 3a62_A           17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL   96 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred             HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence            4455  89999999999999983    44 99999997642110        111              34 44333   


Q ss_pred             cEEE--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc---
Q 039505          208 ALIT--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH---  254 (342)
Q Consensus       208 ~lv~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~---  254 (342)
                      ++|+  +                          ++.||+|||+   .+|+||||||+|||++.+  .++.+++....   
T Consensus        97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~  173 (327)
T 3a62_A           97 YLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIH  173 (327)
T ss_dssp             EEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTSCEEECCCSCC-----
T ss_pred             EEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh---CCEEcccCCHHHeEECCCCcEEEEeCCccccccc
Confidence            4444  2                          8899999999   899999999999999988  44444443221   


Q ss_pred             ---cccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHH
Q 039505          255 ---MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGK  305 (342)
Q Consensus       255 ---~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~  305 (342)
                         ......||+.|+|                          ||+.||.......   +. ..+.....  ..+......
T Consensus       174 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~-~~i~~~~~--~~p~~~~~~  247 (327)
T 3a62_A          174 DGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK---TI-DKILKCKL--NLPPYLTQE  247 (327)
T ss_dssp             -----CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HH-HHHHHTCC--CCCTTSCHH
T ss_pred             CCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHH---HH-HHHHhCCC--CCCCCCCHH
Confidence               1233679999998                          8999987643221   00 11111111  112223455


Q ss_pred             HHHHHHHcccccCCCCC-----CHHHHHH
Q 039505          306 AVEIAMASVSSKVNRRP-----LMNQVVM  329 (342)
Q Consensus       306 l~~l~~~Cl~~~P~~RP-----sm~eV~~  329 (342)
                      +.+++.+||+.+|++||     ++.|+++
T Consensus       248 ~~~li~~~L~~dp~~R~~~~~~~~~e~l~  276 (327)
T 3a62_A          248 ARDLLKKLLKRNAASRLGAGPGDAGEVQA  276 (327)
T ss_dssp             HHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred             HHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence            88999999999999999     6777764

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.77  E-value=3.5e-19  Score=169.86  Aligned_cols=167  Identities=12%  Similarity=0.148  Sum_probs=104.8

Q ss_pred             hccC--cccCcC--CCeeEEEEEECCC--eEEEEEccCCCCCCCc------c--------------EE-EeeCC---cEE
Q 039505          161 NNFE--RVPYKG--GFITVYHGQLVKS--EVAMKMLSPSSSQGHV------P--------------IV-ECHVG---ALI  210 (342)
Q Consensus       161 ~~f~--~~lG~G--~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~------~--------------Lv-~c~~~---~lv  210 (342)
                      ++|.  +.||+|  +||+||+|+...+  .||||+++........      +              ++ ++...   ++|
T Consensus        25 ~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv  104 (389)
T 3gni_B           25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVV  104 (389)
T ss_dssp             GGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             CcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEE
Confidence            3455  899999  9999999999754  9999999765322110      1              33 33333   344


Q ss_pred             E--E----------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCccccCCCCCc------
Q 039505          211 T--I----------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH------  254 (342)
Q Consensus       211 ~--m----------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~~~~~~~~~~------  254 (342)
                      +  +                            +++||+|||+   .+|+||||||+|||++.+..+...+++..      
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~  181 (389)
T 3gni_B          105 TSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISH  181 (389)
T ss_dssp             EECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCGGGCEECEET
T ss_pred             EEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccccceeeccc
Confidence            3  2                            8899999999   99999999999999998843333222211      


Q ss_pred             ---------cccccccCcceee----------------------------cCCCCcccccccc-cccccc---ccccccc
Q 039505          255 ---------MSTTIAGTAGFLN----------------------------TKNPVISKSIENG-NSHLRD---KSTVDLS  293 (342)
Q Consensus       255 ---------~~~~~~Gt~~y~a----------------------------tG~~P~~~~~~~~-~~~l~~---~~~~d~~  293 (342)
                               ......||+.|+|                            ||+.||....... ......   ....+..
T Consensus       182 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  261 (389)
T 3gni_B          182 GQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTS  261 (389)
T ss_dssp             TEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC------------
T ss_pred             cccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccccc
Confidence                     1122468888888                            8999987543221 000000   0000000


Q ss_pred             C------------------------------------CCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHH
Q 039505          294 F------------------------------------KGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMV  330 (342)
Q Consensus       294 l------------------------------------~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~  330 (342)
                      .                                    ....+......+.+++.+||+.||++|||+.|+++.
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h  334 (389)
T 3gni_B          262 TIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH  334 (389)
T ss_dssp             --------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             ccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence            0                                    000112234558899999999999999999999853

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.76  E-value=1.9e-19  Score=169.49  Aligned_cols=171  Identities=12%  Similarity=0.130  Sum_probs=110.8

Q ss_pred             hccC--cccCcCCCeeEEEEEECC---------C-eEEEEEccCCCCCCCcc----------------------------
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVK---------S-EVAMKMLSPSSSQGHVP----------------------------  200 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~---------~-~vAVK~l~~~~~~~~~~----------------------------  200 (342)
                      ++|.  +.||+|+||.||+|+...         + .||||++..... ...+                            
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~~~-~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~  120 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGR-LFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIP  120 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETTST-HHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCC
T ss_pred             CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEecccch-HHHHHHHHHHhcccchhhhhhhhccCCccCcc
Confidence            3455  899999999999999874         5 899999875421 1111                            


Q ss_pred             -EE-EeeC-C---cEEE--E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC-
Q 039505          201 -IV-ECHV-G---ALIT--I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS-  244 (342)
Q Consensus       201 -Lv-~c~~-~---~lv~--m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a-  244 (342)
                       ++ ++.. +   ++|+  +                           +++||+|||+   .+|+||||||+|||++.+. 
T Consensus       121 ~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIl~~~~~~  197 (352)
T 2jii_A          121 TCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHE---NEYVHGNVTAENIFVDPEDQ  197 (352)
T ss_dssp             CCCEEEEETTTEEEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCGGGEEEETTEE
T ss_pred             chhhccccCCcEEEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEEcCCCC
Confidence             12 3322 1   3333  1                           8999999999   8999999999999999873 


Q ss_pred             -ccccCCCCCc---------------cccccccCcceee--------------------------cCCCCcccccccccc
Q 039505          245 -RISPVEGGTH---------------MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNS  282 (342)
Q Consensus       245 -~~~~~~~~~~---------------~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~  282 (342)
                       ++...+++..               ......||+.|+|                          ||+.||........ 
T Consensus       198 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-  276 (352)
T 2jii_A          198 SQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTE-  276 (352)
T ss_dssp             EEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHH-
T ss_pred             ceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHH-
Confidence             3333232211               1122478999998                          89999886532210 


Q ss_pred             cccc--ccccc--ccCCCC--CChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccC
Q 039505          283 HLRD--KSTVD--LSFKGE--FDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNG  336 (342)
Q Consensus       283 ~l~~--~~~~d--~~l~~~--~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~  336 (342)
                      .+..  .....  +.+...  ........+.+++..||+.+|++|||+.++++.|+++..
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~  336 (352)
T 2jii_A          277 DIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQ  336 (352)
T ss_dssp             HHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHH
Confidence            1111  00000  000000  001223558899999999999999999999999988753

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.76  E-value=6e-19  Score=163.07  Aligned_cols=171  Identities=15%  Similarity=0.118  Sum_probs=110.6

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-------c--------------EE-EeeCC---cEEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-------P--------------IV-ECHVG---ALIT  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-------~--------------Lv-~c~~~---~lv~  211 (342)
                      ++|.  +.||+|+||.||+|....+  .||||++.........       +              ++ ++...   ++++
T Consensus        34 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  113 (309)
T 2h34_A           34 GPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDM  113 (309)
T ss_dssp             CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEE
Confidence            4555  8999999999999998754  9999998754322110       0              44 44433   3443


Q ss_pred             --E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-------
Q 039505          212 --I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-------  254 (342)
Q Consensus       212 --m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-------  254 (342)
                        +                          +++||+|||+   .+|+||||||+|||++.+  .++.+++....       
T Consensus       114 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~  190 (309)
T 2h34_A          114 RLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHA---AGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLT  190 (309)
T ss_dssp             ECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSCCC----------
T ss_pred             EecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CcCCcCCCChHHEEEcCCCCEEEecCccCccccccccc
Confidence              1                          8899999999   999999999999999988  44444433211       


Q ss_pred             cccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHH
Q 039505          255 MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVE  308 (342)
Q Consensus       255 ~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~  308 (342)
                      ......||+.|+|                          ||+.||...........+......+   ...+......+.+
T Consensus       191 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~  267 (309)
T 2h34_A          191 QLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRP---STVRPGIPVAFDA  267 (309)
T ss_dssp             ------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCCG---GGTSTTCCTHHHH
T ss_pred             cccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCCc---cccCCCCCHHHHH
Confidence            1123568888887                          8888887543221000000111111   0112223345888


Q ss_pred             HHHHcccccCCCCC-CHHHHHHHHHhccCC
Q 039505          309 IAMASVSSKVNRRP-LMNQVVMVREQGNGS  337 (342)
Q Consensus       309 l~~~Cl~~~P~~RP-sm~eV~~~L~~i~~~  337 (342)
                      ++.+||+.+|++|| ++.++++.|+.....
T Consensus       268 li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~  297 (309)
T 2h34_A          268 VIARGMAKNPEDRYVTCGDLSAAAHAALAT  297 (309)
T ss_dssp             HHHHHTCSSGGGSCSSHHHHHHHHHHTCC-
T ss_pred             HHHHhccCCHHHHHHhHHHHHHHHHHHHHh
Confidence            99999999999999 999999999887543

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.76  E-value=5.2e-19  Score=165.39  Aligned_cols=118  Identities=17%  Similarity=0.134  Sum_probs=76.1

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC----CccccCCCCCc----------cccccccCcceee-----------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK----SRISPVEGGTH----------MSTTIAGTAGFLN-----------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~----a~~~~~~~~~~----------~~~~~~Gt~~y~a-----------  267 (342)
                      +++||+|||+   .+|+||||||+|||++.+    .++.+++....          ......||+.|+|           
T Consensus       177 i~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  253 (345)
T 3hko_A          177 IFSALHYLHN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESY  253 (345)
T ss_dssp             HHHHHHHHHH---TTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCC
T ss_pred             HHHHHHHHHH---CCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCC
Confidence            6789999999   899999999999999866    34444433221          1233578999988           


Q ss_pred             -----------------cCCCCcccccccccccccccccccccCC--CCCChHHHHHHHHHHHHcccccCCCCCCHHHHH
Q 039505          268 -----------------TKNPVISKSIENGNSHLRDKSTVDLSFK--GEFDIISVGKAVEIAMASVSSKVNRRPLMNQVV  328 (342)
Q Consensus       268 -----------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~--~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~  328 (342)
                                       ||+.||.......  .+  ..+......  ..........+.+++.+||+.+|++|||+.|++
T Consensus       254 ~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l  329 (345)
T 3hko_A          254 GPKCDAWSAGVLLHLLLMGAVPFPGVNDAD--TI--SQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRAL  329 (345)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HH--HHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHCCCCCCCCChHH--HH--HHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHh
Confidence                             7888876543221  11  111111111  111112345688999999999999999999998


Q ss_pred             H--HHHhccCC
Q 039505          329 M--VREQGNGS  337 (342)
Q Consensus       329 ~--~L~~i~~~  337 (342)
                      +  .++.....
T Consensus       330 ~hp~~~~~~~~  340 (345)
T 3hko_A          330 QHPWISQFSDK  340 (345)
T ss_dssp             HSHHHHTTSSC
T ss_pred             cChhhccChHh
Confidence            6  46665543

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.76  E-value=3e-19  Score=166.16  Aligned_cols=168  Identities=17%  Similarity=0.168  Sum_probs=106.3

Q ss_pred             hccC--cccCcCCCeeEEEEEEC------CC-eEEEEEccCCCCCCCcc-------------------EE-EeeCC---c
Q 039505          161 NNFE--RVPYKGGFITVYHGQLV------KS-EVAMKMLSPSSSQGHVP-------------------IV-ECHVG---A  208 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~------~~-~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~---~  208 (342)
                      ++|.  +.||+|+||.||+|++.      ++ .||||++..........                   ++ ++...   +
T Consensus        30 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  109 (327)
T 2yfx_A           30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF  109 (327)
T ss_dssp             GGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             hheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcE
Confidence            3454  89999999999999853      22 89999996443211110                   33 33333   3


Q ss_pred             EEE--E---------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-----Ccccc
Q 039505          209 LIT--I---------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-----SRISP  248 (342)
Q Consensus       209 lv~--m---------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-----a~~~~  248 (342)
                      +|+  +                                 +++||.|||+   .+|+||||||+|||++.+     .++.+
T Consensus       110 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~i~H~dlkp~NIli~~~~~~~~~kl~D  186 (327)
T 2yfx_A          110 ILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGD  186 (327)
T ss_dssp             EEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred             EEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeecCcCCHhHEEEecCCCcceEEECc
Confidence            333  1                                 8899999999   999999999999999944     33333


Q ss_pred             CCCCC--------ccccccccCcceee--------------------------c-CCCCccccccccccccccccccccc
Q 039505          249 VEGGT--------HMSTTIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLS  293 (342)
Q Consensus       249 ~~~~~--------~~~~~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~  293 (342)
                      ++...        .......||+.|+|                          | |+.|+.......   +..  .+...
T Consensus       187 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~~--~~~~~  261 (327)
T 2yfx_A          187 FGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE---VLE--FVTSG  261 (327)
T ss_dssp             CHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH---HHH--HHHTT
T ss_pred             cccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHH---HHH--HHhcC
Confidence            32111        11123567888988                          6 888887543221   110  00000


Q ss_pred             CCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccC
Q 039505          294 FKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNG  336 (342)
Q Consensus       294 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~  336 (342)
                      .....+......+.+++..||+.+|++||++.++++.|+.+..
T Consensus       262 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~  304 (327)
T 2yfx_A          262 GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ  304 (327)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence            0111222334568899999999999999999999999987753

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.76  E-value=2.9e-19  Score=174.96  Aligned_cols=166  Identities=15%  Similarity=0.144  Sum_probs=104.6

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC------cc--------------EE-EeeCC--------
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH------VP--------------IV-ECHVG--------  207 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~------~~--------------Lv-~c~~~--------  207 (342)
                      ++|.  +.||+|+||+||+|....+  .||||++........      ++              ++ ++...        
T Consensus        62 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~  141 (464)
T 3ttj_A           62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD  141 (464)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCe
Confidence            4455  8999999999999998755  999999975421110      00              22 33211        


Q ss_pred             -cEEE--E-----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-----
Q 039505          208 -ALIT--I-----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-----  254 (342)
Q Consensus       208 -~lv~--m-----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-----  254 (342)
                       ++|+  |                       +++||+|||+   .+|+||||||+|||++.+  .++.+++....     
T Consensus       142 ~~lv~E~~~~~l~~~~~~~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  218 (464)
T 3ttj_A          142 VYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF  218 (464)
T ss_dssp             EEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCCC-----CC
T ss_pred             EEEEEeCCCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCCc
Confidence             3444  2                       8899999999   899999999999999988  44555443321     


Q ss_pred             cccccccCcceee--------------------------cCCCCcccccccc-cccccc-----------------cccc
Q 039505          255 MSTTIAGTAGFLN--------------------------TKNPVISKSIENG-NSHLRD-----------------KSTV  290 (342)
Q Consensus       255 ~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~-~~~l~~-----------------~~~~  290 (342)
                      .....+||++|+|                          +|+.||....... ...++.                 ...+
T Consensus       219 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~  298 (464)
T 3ttj_A          219 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV  298 (464)
T ss_dssp             CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHH
T ss_pred             ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHh
Confidence            1234689999998                          8999987643211 000000                 0000


Q ss_pred             c--ccCC-------------CC---CChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          291 D--LSFK-------------GE---FDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       291 d--~~l~-------------~~---~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      +  +...             ..   ........+.+++.+||+.||++|||+.|+++
T Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  355 (464)
T 3ttj_A          299 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ  355 (464)
T ss_dssp             TTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             hcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            0  0000             00   00112456889999999999999999999985

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.76  E-value=2.6e-19  Score=165.24  Aligned_cols=162  Identities=18%  Similarity=0.219  Sum_probs=96.5

Q ss_pred             hccC--cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCCCcc--------------------EE-EeeCC---cEEE-
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQGHVP--------------------IV-ECHVG---ALIT-  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~~~~--------------------Lv-~c~~~---~lv~-  211 (342)
                      ++|.  +.||+|+||.||+|.+.. + .||||++..........                    ++ ++...   ++|+ 
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e  104 (318)
T 2dyl_A           25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAME  104 (318)
T ss_dssp             GGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEe
Confidence            3455  889999999999999974 4 99999997653221110                    44 45444   4444 


Q ss_pred             -E--------------------------ehhhhhhhhccCCC-CeeeCCCCcceEEecCC--CccccCCCCCc-----cc
Q 039505          212 -I--------------------------PKEGLEYLHQGLKH-PIIQRDMKSTNILLNEK--SRISPVEGGTH-----MS  256 (342)
Q Consensus       212 -m--------------------------ia~gL~yLH~~~~~-~IiHrDlKp~NILLd~~--a~~~~~~~~~~-----~~  256 (342)
                       +                          +++||+|||+   . +|+||||||+|||++.+  .++.+++....     ..
T Consensus       105 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~  181 (318)
T 2dyl_A          105 LMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKE---KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK  181 (318)
T ss_dssp             CCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH---HHCCCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred             ccCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh---hCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCccc
Confidence             1                          8899999998   5 89999999999999988  44444433211     11


Q ss_pred             cccccCcceee-------------------------------cCCCCcccccccccccccc--cccccccCCCCCChHHH
Q 039505          257 TTIAGTAGFLN-------------------------------TKNPVISKSIENGNSHLRD--KSTVDLSFKGEFDIISV  303 (342)
Q Consensus       257 ~~~~Gt~~y~a-------------------------------tG~~P~~~~~~~~~~~l~~--~~~~d~~l~~~~~~~~~  303 (342)
                      ....||+.|+|                               ||+.|+.......  ....  .....+.+..  .....
T Consensus       182 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~  257 (318)
T 2dyl_A          182 DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDF--EVLTKVLQEEPPLLPG--HMGFS  257 (318)
T ss_dssp             -----CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHH--HHHHHHHHSCCCCCCS--SSCCC
T ss_pred             cccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccH--HHHHHHhccCCCCCCc--cCCCC
Confidence            23467888876                               7788876532211  1111  0001111111  11233


Q ss_pred             HHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          304 GKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       304 ~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ..+.+++.+||+.+|.+||++.|+++
T Consensus       258 ~~l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          258 GDFQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             HHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhh
Confidence            45889999999999999999999874

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.76  E-value=3.8e-19  Score=181.16  Aligned_cols=163  Identities=13%  Similarity=0.120  Sum_probs=109.8

Q ss_pred             cccCcCCCeeEEEEEECCC-----eEEEEEccCCCCCCCcc-------------------EE-EeeCC--cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVKS-----EVAMKMLSPSSSQGHVP-------------------IV-ECHVG--ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~-----~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~--~lv~--m---  212 (342)
                      +.||+|+||+||+|.+...     .||||+++........+                   ++ +|.++  ++|+  +   
T Consensus       396 ~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~lv~E~~~~g  475 (656)
T 2j0j_A          396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLG  475 (656)
T ss_dssp             EEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECCTTC
T ss_pred             eEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCceEEEEEcCCCC
Confidence            7899999999999998532     69999987643221111                   44 55444  4444  2   


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc-------cccc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM-------STTI  259 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~-------~~~~  259 (342)
                                              +++||+|||+   .+|+||||||+|||++.+  .++.+++.....       ....
T Consensus       476 ~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~  552 (656)
T 2j0j_A          476 ELRSFLQVRKFSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG  552 (656)
T ss_dssp             BHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC---------
T ss_pred             cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchHhEEEeCCCCEEEEecCCCeecCCCcceeccCC
Confidence                                    8999999999   999999999999999987  455554433211       1224


Q ss_pred             ccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHH
Q 039505          260 AGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMA  312 (342)
Q Consensus       260 ~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~  312 (342)
                      .||+.|+|                          | |+.||.......   +.. .+.+ ......+......+.+++.+
T Consensus       553 ~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~---~~~-~i~~-~~~~~~~~~~~~~l~~li~~  627 (656)
T 2j0j_A          553 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND---VIG-RIEN-GERLPMPPNCPPTLYSLMTK  627 (656)
T ss_dssp             -CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH---HHH-HHHH-TCCCCCCTTCCHHHHHHHHH
T ss_pred             CCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH---HHH-HHHc-CCCCCCCccccHHHHHHHHH
Confidence            56788998                          5 888887643221   110 0000 00111223344568899999


Q ss_pred             cccccCCCCCCHHHHHHHHHhcc
Q 039505          313 SVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       313 Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                      ||+.+|++|||+.++++.|+.+.
T Consensus       628 ~l~~dP~~RPs~~el~~~L~~il  650 (656)
T 2j0j_A          628 CWAYDPSRRPRFTELKAQLSTIL  650 (656)
T ss_dssp             HTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HcCCChhHCcCHHHHHHHHHHHH
Confidence            99999999999999999999874

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.76  E-value=2.9e-19  Score=170.19  Aligned_cols=107  Identities=19%  Similarity=0.198  Sum_probs=72.6

Q ss_pred             hhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC---cc--------------------EE-EeeCC---c
Q 039505          160 TNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH---VP--------------------IV-ECHVG---A  208 (342)
Q Consensus       160 t~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~---~~--------------------Lv-~c~~~---~  208 (342)
                      .++|.  +.||+|+||+||+|....+  .||||+++.......   .+                    +. ++...   +
T Consensus        53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  132 (382)
T 2vx3_A           53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLC  132 (382)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEE
T ss_pred             eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceE
Confidence            45566  8999999999999998755  899999975321000   00                    33 33322   4


Q ss_pred             EEE--E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecC--C--CccccCCCCCc-
Q 039505          209 LIT--I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNE--K--SRISPVEGGTH-  254 (342)
Q Consensus       209 lv~--m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~--~--a~~~~~~~~~~-  254 (342)
                      +|+  +                           ++.||.|||+. ..+|+||||||+|||++.  +  .++.+++.... 
T Consensus       133 lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~  211 (382)
T 2vx3_A          133 LVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL  211 (382)
T ss_dssp             EEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTCEET
T ss_pred             EEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCceec
Confidence            444  1                           88999999951 278999999999999964  3  45555444322 


Q ss_pred             --cccccccCcceee
Q 039505          255 --MSTTIAGTAGFLN  267 (342)
Q Consensus       255 --~~~~~~Gt~~y~a  267 (342)
                        ......||+.|+|
T Consensus       212 ~~~~~~~~~t~~y~a  226 (382)
T 2vx3_A          212 GQRIYQYIQSRFYRS  226 (382)
T ss_dssp             TCCCCSSCSCGGGCC
T ss_pred             ccccccccCCccccC
Confidence              1234679999998

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.76  E-value=8.3e-19  Score=161.42  Aligned_cols=164  Identities=19%  Similarity=0.222  Sum_probs=105.6

Q ss_pred             hccC--cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCCCcc------------------EE-EeeCC---cEEE--E
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQGHVP------------------IV-ECHVG---ALIT--I  212 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~~~~------------------Lv-~c~~~---~lv~--m  212 (342)
                      +.|.  +.||+|+||.||+|+... + .||||+++.........                  ++ ++...   ++++  +
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   88 (304)
T 2jam_A            9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV   88 (304)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcC
Confidence            3455  899999999999999874 4 99999998654322211                  33 44443   3333  1


Q ss_pred             --------------------------ehhhhhhhhccCCCCeeeCCCCcceEEe---cCC--CccccCCCCCc----ccc
Q 039505          213 --------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILL---NEK--SRISPVEGGTH----MST  257 (342)
Q Consensus       213 --------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILL---d~~--a~~~~~~~~~~----~~~  257 (342)
                                                ++.||+|||+   .+|+||||||+|||+   +++  .++.+++....    ...
T Consensus        89 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~  165 (304)
T 2jam_A           89 SGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMS  165 (304)
T ss_dssp             CSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTH
T ss_pred             CCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCccc
Confidence                                      8899999999   899999999999999   444  34444433221    112


Q ss_pred             ccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHH
Q 039505          258 TIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAM  311 (342)
Q Consensus       258 ~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~  311 (342)
                      ...||+.|+|                          ||+.|+...........+.....  .............+.+++.
T Consensus       166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~li~  243 (304)
T 2jam_A          166 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYY--EFESPFWDDISESAKDFIC  243 (304)
T ss_dssp             HHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCC--CCCTTTTTTSCHHHHHHHH
T ss_pred             cccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC--CCCccccccCCHHHHHHHH
Confidence            3568999988                          88888865432210000000000  1111112233456889999


Q ss_pred             HcccccCCCCCCHHHHHH
Q 039505          312 ASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       312 ~Cl~~~P~~RPsm~eV~~  329 (342)
                      +||+.+|++|||+.|+++
T Consensus       244 ~~l~~dp~~Rps~~~~l~  261 (304)
T 2jam_A          244 HLLEKDPNERYTCEKALS  261 (304)
T ss_dssp             HHHCSSTTTSCCHHHHHT
T ss_pred             HHcCCChhHCcCHHHHhc
Confidence            999999999999999985

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.76  E-value=5.9e-19  Score=164.66  Aligned_cols=168  Identities=17%  Similarity=0.183  Sum_probs=102.5

Q ss_pred             HhhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC------cc--------------EE-EeeCC---cEE
Q 039505          159 VTNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH------VP--------------IV-ECHVG---ALI  210 (342)
Q Consensus       159 at~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~------~~--------------Lv-~c~~~---~lv  210 (342)
                      ..++|.  +.||+|+||+||+|+...+  .||||+++.......      ++              +. ++..+   ++|
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  111 (329)
T 3gbz_A           32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI  111 (329)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred             chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence            345666  8999999999999998755  999999976543221      11              44 44443   444


Q ss_pred             E--E-------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-------CccccCCCCC---
Q 039505          211 T--I-------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-------SRISPVEGGT---  253 (342)
Q Consensus       211 ~--m-------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-------a~~~~~~~~~---  253 (342)
                      +  +                         +++||+|||+   .+|+||||||+|||++.+       .++.+++...   
T Consensus       112 ~e~~~~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~  188 (329)
T 3gbz_A          112 FEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHS---RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG  188 (329)
T ss_dssp             EECCSEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC
T ss_pred             EecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh---CCEECCCCCHHHEEEecCCCCccceEEECcCCCccccC
Confidence            4  1                         8999999999   999999999999999533       3444433211   


Q ss_pred             ---ccccccccCcceee---------------------------cCCCCcccccccc-cccccc-ccccc----------
Q 039505          254 ---HMSTTIAGTAGFLN---------------------------TKNPVISKSIENG-NSHLRD-KSTVD----------  291 (342)
Q Consensus       254 ---~~~~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~-~~~l~~-~~~~d----------  291 (342)
                         .......||+.|+|                           ||+.||....... ...+.. ....+          
T Consensus       189 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (329)
T 3gbz_A          189 IPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTAL  268 (329)
T ss_dssp             -----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGS
T ss_pred             CcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhh
Confidence               11233567888888                           8888886543211 000000 00000          


Q ss_pred             -------ccCCCCC-----ChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          292 -------LSFKGEF-----DIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       292 -------~~l~~~~-----~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                             +......     .......+.+++.+||+.||++|||+.|+++
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  318 (329)
T 3gbz_A          269 PDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE  318 (329)
T ss_dssp             TTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             hhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence                   0000000     0112356789999999999999999999985

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.76  E-value=2.5e-19  Score=168.97  Aligned_cols=174  Identities=17%  Similarity=0.176  Sum_probs=110.4

Q ss_pred             HHHHHHHhhccC--cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCCc---------------c--------------
Q 039505          153 LELSLRVTNNFE--RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGHV---------------P--------------  200 (342)
Q Consensus       153 ~~~l~~at~~f~--~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~~---------------~--------------  200 (342)
                      .+++....++|.  +.||+|+||.||+|....+ .||||++.........               +              
T Consensus        14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   93 (362)
T 3pg1_A           14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG   93 (362)
T ss_dssp             HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence            567777888888  9999999999999998878 9999998654332211               1              


Q ss_pred             EE-EeeC-----C---cEEE--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC
Q 039505          201 IV-ECHV-----G---ALIT--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK  243 (342)
Q Consensus       201 Lv-~c~~-----~---~lv~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~  243 (342)
                      ++ ++..     .   ++|+  +                          +++||+|||+   .+|+||||||+|||++.+
T Consensus        94 ~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~  170 (362)
T 3pg1_A           94 LRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNILLADN  170 (362)
T ss_dssp             CSEEEEECCTTTCCEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTT
T ss_pred             eeeeEEeccCCCcceEEEEEccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CcCEecCCChHHEEEcCC
Confidence            22 3311     1   3333  1                          8999999999   899999999999999988


Q ss_pred             C--ccccCCCCCc-----cccccccCcceee---------------------------cCCCCcccccccc-cccccc--
Q 039505          244 S--RISPVEGGTH-----MSTTIAGTAGFLN---------------------------TKNPVISKSIENG-NSHLRD--  286 (342)
Q Consensus       244 a--~~~~~~~~~~-----~~~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~-~~~l~~--  286 (342)
                      .  ++.+++....     ......||+.|+|                           ||+.|+....... ...++.  
T Consensus       171 ~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~  250 (362)
T 3pg1_A          171 NDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVV  250 (362)
T ss_dssp             CCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred             CCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHc
Confidence            4  4444433221     1233578888888                           8888887543211 000000  


Q ss_pred             ----------------cccccccCC---CC----CChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          287 ----------------KSTVDLSFK---GE----FDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       287 ----------------~~~~d~~l~---~~----~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                                      .+.....+.   ..    ........+.+++.+||+.+|++|||+.|+++
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  316 (362)
T 3pg1_A          251 GTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR  316 (362)
T ss_dssp             CCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence                            000000000   00    01122345889999999999999999999985

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.76  E-value=4.3e-19  Score=175.24  Aligned_cols=163  Identities=20%  Similarity=0.189  Sum_probs=106.2

Q ss_pred             hhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCC------------Cc-----c--------------EE-E
Q 039505          160 TNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQG------------HV-----P--------------IV-E  203 (342)
Q Consensus       160 t~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~------------~~-----~--------------Lv-~  203 (342)
                      .+.|.  +.||+|+||+||+|....+  .||||++.......            ..     +              ++ +
T Consensus        35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~  114 (504)
T 3q5i_A           35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV  114 (504)
T ss_dssp             GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence            34565  8999999999999998765  89999997653221            00     0              44 4


Q ss_pred             eeCC---cEEE--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-----Cccc
Q 039505          204 CHVG---ALIT--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-----SRIS  247 (342)
Q Consensus       204 c~~~---~lv~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-----a~~~  247 (342)
                      |..+   ++|+  +                          ++.||+|||+   .+|+||||||+|||++.+     .++.
T Consensus       115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~  191 (504)
T 3q5i_A          115 FEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIV  191 (504)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESSTTCCSSEEEC
T ss_pred             EEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCcHHHEEEecCCCCccEEEE
Confidence            4444   3443  1                          8899999999   999999999999999976     2444


Q ss_pred             cCCCCCc-----cccccccCcceee-------------------------cCCCCcccccccccccccccccccccCCCC
Q 039505          248 PVEGGTH-----MSTTIAGTAGFLN-------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGE  297 (342)
Q Consensus       248 ~~~~~~~-----~~~~~~Gt~~y~a-------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~  297 (342)
                      +++....     ......||+.|+|                         ||+.||.......   +.. .+........
T Consensus       192 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~~-~i~~~~~~~~  267 (504)
T 3q5i_A          192 DFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQD---IIK-KVEKGKYYFD  267 (504)
T ss_dssp             CCTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHH-HHHHCCCCCC
T ss_pred             ECCCCEEcCCCCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHH-HHHcCCCCCC
Confidence            4443321     1234679999998                         8999987654322   110 0111111000


Q ss_pred             --CChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          298 --FDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       298 --~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                        ........+.+++.+||+.+|.+|||+.|+++
T Consensus       268 ~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~  301 (504)
T 3q5i_A          268 FNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN  301 (504)
T ss_dssp             HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence              00122355889999999999999999999984

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.76  E-value=5.6e-19  Score=173.37  Aligned_cols=156  Identities=17%  Similarity=0.194  Sum_probs=105.5

Q ss_pred             cccCcCCCeeEEEEEECC-C-eEEEEEccCCCC---CCC----cc--------------EE-EeeCC---cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSS---QGH----VP--------------IV-ECHVG---ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~---~~~----~~--------------Lv-~c~~~---~lv~--m---  212 (342)
                      +.||+|+||.||+|++.. + .||||+++....   ...    ++              ++ ++...   ++|+  +   
T Consensus        22 ~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg  101 (476)
T 2y94_A           22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGG  101 (476)
T ss_dssp             EEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSSE
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCC
Confidence            899999999999999874 4 999999864321   100    01              33 44333   3333  1   


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-----cccccccC
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-----MSTTIAGT  262 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-----~~~~~~Gt  262 (342)
                                             +++||+|||+   .+|+||||||+|||++.+  .++.+++....     .....+||
T Consensus       102 ~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~gt  178 (476)
T 2y94_A          102 ELFDYICKNGRLDEKESRRLFQQILSGVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGS  178 (476)
T ss_dssp             EHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCBCCCCSC
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcccccHHHEEEecCCCeEEEeccchhhccccccccccCCC
Confidence                                   8999999999   999999999999999988  44444443321     12346799


Q ss_pred             cceee---------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHccc
Q 039505          263 AGFLN---------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVS  315 (342)
Q Consensus       263 ~~y~a---------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~  315 (342)
                      +.|+|                           ||+.||+......   +. ..+.+...  ..+......+.+++.+||+
T Consensus       179 ~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~---~~-~~i~~~~~--~~p~~~s~~~~~Li~~~L~  252 (476)
T 2y94_A          179 PNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPT---LF-KKICDGIF--YTPQYLNPSVISLLKHMLQ  252 (476)
T ss_dssp             STTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHH---HH-HHHHTTCC--CCCTTCCHHHHHHHHHHTC
T ss_pred             cCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHH---HH-HHHhcCCc--CCCccCCHHHHHHHHHHcC
Confidence            99998                           8888887543221   11 11111111  1112223458889999999


Q ss_pred             ccCCCCCCHHHHHH
Q 039505          316 SKVNRRPLMNQVVM  329 (342)
Q Consensus       316 ~~P~~RPsm~eV~~  329 (342)
                      .+|++|||+.|+++
T Consensus       253 ~dP~~Rpt~~eil~  266 (476)
T 2y94_A          253 VDPMKRATIKDIRE  266 (476)
T ss_dssp             SSTTTSCCHHHHHT
T ss_pred             CCchhCcCHHHHHh
Confidence            99999999999985

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.76  E-value=1.7e-18  Score=168.82  Aligned_cols=87  Identities=18%  Similarity=0.235  Sum_probs=55.8

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc------c--------------EE-EeeCC--------
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV------P--------------IV-ECHVG--------  207 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~------~--------------Lv-~c~~~--------  207 (342)
                      +.|.  +.||+|+||+||+|+...+  .||||++.........      +              ++ +|...        
T Consensus        53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  132 (458)
T 3rp9_A           53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL  132 (458)
T ss_dssp             TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred             CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence            4455  8999999999999998754  9999998654322111      1              44 44211        


Q ss_pred             cEEE--E-------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCC
Q 039505          208 ALIT--I-------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVE  250 (342)
Q Consensus       208 ~lv~--m-------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~  250 (342)
                      ++|+  +                         +++||+|||+   .+||||||||+||||+.+  .++.+++
T Consensus       133 ~lv~e~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~iiHrDlKp~NILl~~~~~~kl~DFG  201 (458)
T 3rp9_A          133 YVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHS---AGILHRDLKPANCLVNQDCSVKVCDFG  201 (458)
T ss_dssp             EEEECCCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCT
T ss_pred             EEEEeccccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHh---CCcCCCCCChhhEEECCCCCEeecccc
Confidence            4444  2                         8999999999   999999999999999998  3444443

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.76  E-value=4.2e-19  Score=167.40  Aligned_cols=165  Identities=17%  Similarity=0.174  Sum_probs=105.7

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc-------------------EE-EeeCC---cEEE--E
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP-------------------IV-ECHVG---ALIT--I  212 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~---~lv~--m  212 (342)
                      +|.  +.||+|+||+||+|.+..+  .||+|++.........+                   ++ ++..+   ++|+  +
T Consensus        34 ~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  113 (360)
T 3eqc_A           34 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM  113 (360)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             cceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECC
Confidence            455  8999999999999999754  99999987653211111                   44 44333   4444  2


Q ss_pred             --------------------------ehhhhhhhhccCCC-CeeeCCCCcceEEecCCCccccCCCCCc------ccccc
Q 039505          213 --------------------------PKEGLEYLHQGLKH-PIIQRDMKSTNILLNEKSRISPVEGGTH------MSTTI  259 (342)
Q Consensus       213 --------------------------ia~gL~yLH~~~~~-~IiHrDlKp~NILLd~~a~~~~~~~~~~------~~~~~  259 (342)
                                                +++||+|||+   . +|+||||||+|||++.+..+...+++..      .....
T Consensus       114 ~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  190 (360)
T 3eqc_A          114 DGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF  190 (360)
T ss_dssp             TTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC----
T ss_pred             CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---hCCEEcCCccHHHEEECCCCCEEEEECCCCcccccccccCC
Confidence                                      8899999998   5 8999999999999998844433334322      12336


Q ss_pred             ccCcceee--------------------------cCCCCcccccccccccccc---------------------------
Q 039505          260 AGTAGFLN--------------------------TKNPVISKSIENGNSHLRD---------------------------  286 (342)
Q Consensus       260 ~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~---------------------------  286 (342)
                      .||+.|+|                          ||+.||.............                           
T Consensus       191 ~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (360)
T 3eqc_A          191 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMD  270 (360)
T ss_dssp             CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC---------------------------
T ss_pred             CCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccC
Confidence            78999998                          9999987543211000000                           


Q ss_pred             -----------cccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          287 -----------KSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       287 -----------~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                                 ..+................+.+++.+||+.+|++|||+.|+++
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  324 (360)
T 3eqc_A          271 SRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV  324 (360)
T ss_dssp             ---CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             CCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence                       0000000000011122445889999999999999999999984

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.76  E-value=3e-19  Score=178.63  Aligned_cols=164  Identities=24%  Similarity=0.282  Sum_probs=108.0

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCC---CCC----cc--------------EE-EeeCC---cEEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSS---QGH----VP--------------IV-ECHVG---ALIT  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~---~~~----~~--------------Lv-~c~~~---~lv~  211 (342)
                      ++|.  ++||+|+||.||+|+...+  .||||++.....   ...    .+              +. ++...   ++|+
T Consensus       184 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm  263 (576)
T 2acx_A          184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL  263 (576)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEE
Confidence            4566  8999999999999999754  999999864311   110    01              33 33332   3333


Q ss_pred             --E----------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-----
Q 039505          212 --I----------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-----  254 (342)
Q Consensus       212 --m----------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-----  254 (342)
                        +                            ++.||+|||+   .+|+||||||+|||++.+  .++.+++....     
T Consensus       264 Ey~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~---~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~  340 (576)
T 2acx_A          264 TLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ  340 (576)
T ss_dssp             CCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred             EcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCchheEEEeCCCCeEEEecccceecccCc
Confidence              1                            8899999999   999999999999999988  44444443321     


Q ss_pred             cccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHH
Q 039505          255 MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVE  308 (342)
Q Consensus       255 ~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~  308 (342)
                      .....+||+.|+|                          ||+.||..........-+...+..  .....+......+.+
T Consensus       341 ~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~--~~~~~p~~~s~~~~d  418 (576)
T 2acx_A          341 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE--VPEEYSERFSPQARS  418 (576)
T ss_dssp             CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHH--CCCCCCTTSCHHHHH
T ss_pred             cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhc--ccccCCccCCHHHHH
Confidence            1234689999999                          999999865432100000001111  111222333456889


Q ss_pred             HHHHcccccCCCCC-----CHHHHHH
Q 039505          309 IAMASVSSKVNRRP-----LMNQVVM  329 (342)
Q Consensus       309 l~~~Cl~~~P~~RP-----sm~eV~~  329 (342)
                      ++.+||+.+|++||     ++.||++
T Consensus       419 LI~~lL~~dP~~R~g~~~~sa~eil~  444 (576)
T 2acx_A          419 LCSQLLCKDPAERLGCRGGSAREVKE  444 (576)
T ss_dssp             HHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred             HHHHhccCCHHHcCCCCCCCHHHHHh
Confidence            99999999999999     6788864

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.76  E-value=7.7e-19  Score=160.73  Aligned_cols=156  Identities=19%  Similarity=0.232  Sum_probs=105.8

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc---------------------EE-EeeCC---cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP---------------------IV-ECHVG---ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~---------------------Lv-~c~~~---~lv~--m---  212 (342)
                      +.||+|+||.||+|....+  .||+|++..........                     ++ +|...   ++++  +   
T Consensus        21 ~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  100 (294)
T 2rku_A           21 RFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRR  100 (294)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred             EEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCCCC
Confidence            8999999999999999765  89999986543221110                     44 55444   3443  1   


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc------ccccccc
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH------MSTTIAG  261 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~------~~~~~~G  261 (342)
                                             +++||+|||+   .+|+||||||+|||++.+.  ++.+++....      ......|
T Consensus       101 ~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~  177 (294)
T 2rku_A          101 SLLELHKRRKALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCG  177 (294)
T ss_dssp             BHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCS
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEcCCCCEEEEeccCceecccCccccccccC
Confidence                                   8999999999   9999999999999999883  4444333211      1223568


Q ss_pred             Ccceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHccc
Q 039505          262 TAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVS  315 (342)
Q Consensus       262 t~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~  315 (342)
                      |+.|+|                          ||+.|+.......  ...  .+.....  ..+......+.+++.+||+
T Consensus       178 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~~--~~~~~~~--~~~~~~~~~~~~li~~~l~  251 (294)
T 2rku_A          178 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE--TYL--RIKKNEY--SIPKHINPVAASLIQKMLQ  251 (294)
T ss_dssp             CCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH--HHH--HHHTTCC--CCCTTSCHHHHHHHHHHTC
T ss_pred             CCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHH--HHhhccC--CCccccCHHHHHHHHHHcc
Confidence            888988                          8888887543221  000  0111111  1122233457889999999


Q ss_pred             ccCCCCCCHHHHHH
Q 039505          316 SKVNRRPLMNQVVM  329 (342)
Q Consensus       316 ~~P~~RPsm~eV~~  329 (342)
                      .+|++|||+.|+++
T Consensus       252 ~~p~~Rps~~~ll~  265 (294)
T 2rku_A          252 TDPTARPTINELLN  265 (294)
T ss_dssp             SSGGGSCCGGGGGG
T ss_pred             cChhhCcCHHHHhh
Confidence            99999999999985

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.76  E-value=9.2e-19  Score=159.90  Aligned_cols=159  Identities=22%  Similarity=0.311  Sum_probs=102.9

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc------c--------------EE-EeeC----C---cEEE--E
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV------P--------------IV-ECHV----G---ALIT--I  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~------~--------------Lv-~c~~----~---~lv~--m  212 (342)
                      +.||+|+||+||+|....+  .||+|++.........      +              ++ ++..    .   ++|+  +
T Consensus        32 ~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~  111 (290)
T 1t4h_A           32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELM  111 (290)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECC
T ss_pred             eeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEec
Confidence            5799999999999998765  8999998754322110      0              33 3322    1   3333  1


Q ss_pred             --------------------------ehhhhhhhhccCCCC--eeeCCCCcceEEec-CC--CccccCCCCC----cccc
Q 039505          213 --------------------------PKEGLEYLHQGLKHP--IIQRDMKSTNILLN-EK--SRISPVEGGT----HMST  257 (342)
Q Consensus       213 --------------------------ia~gL~yLH~~~~~~--IiHrDlKp~NILLd-~~--a~~~~~~~~~----~~~~  257 (342)
                                                +++||.|||+   .+  |+||||||+|||++ ++  .++.+++...    ....
T Consensus       112 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~  188 (290)
T 1t4h_A          112 TSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK  188 (290)
T ss_dssp             CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBE
T ss_pred             CCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHc---CCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccccccc
Confidence                                      8999999999   77  99999999999998 44  3444433221    1123


Q ss_pred             ccccCcceee-------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHH
Q 039505          258 TIAGTAGFLN-------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMA  312 (342)
Q Consensus       258 ~~~Gt~~y~a-------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~  312 (342)
                      ...||+.|+|                         ||+.|+.......  .+.. .+.........+......+.+++..
T Consensus       189 ~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~l~~li~~  265 (290)
T 1t4h_A          189 AVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAA--QIYR-RVTSGVKPASFDKVAIPEVKEIIEG  265 (290)
T ss_dssp             ESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH--HHHH-HHTTTCCCGGGGGCCCHHHHHHHHH
T ss_pred             cccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHH--HHHH-HHhccCCccccCCCCCHHHHHHHHH
Confidence            3568999988                         8998987543221  1111 0111101111112223458899999


Q ss_pred             cccccCCCCCCHHHHHH
Q 039505          313 SVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       313 Cl~~~P~~RPsm~eV~~  329 (342)
                      ||+.+|++|||+.|+++
T Consensus       266 ~l~~dp~~Rps~~ell~  282 (290)
T 1t4h_A          266 CIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             HSCSSGGGSCCHHHHHT
T ss_pred             HccCChhhCCCHHHHhh
Confidence            99999999999999985

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.76  E-value=9.8e-19  Score=159.24  Aligned_cols=166  Identities=20%  Similarity=0.292  Sum_probs=109.4

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCC---CCCCc----c--------------EE-EeeCC---cEEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSS---SQGHV----P--------------IV-ECHVG---ALIT  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~---~~~~~----~--------------Lv-~c~~~---~lv~  211 (342)
                      ++|.  +.||+|+||.||+|....+  .||||++....   .....    +              ++ ++...   ++++
T Consensus        14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   93 (284)
T 2vgo_A           14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML   93 (284)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence            4455  8999999999999998755  89999985431   11000    1              44 44443   3333


Q ss_pred             --E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc----ccc
Q 039505          212 --I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH----MST  257 (342)
Q Consensus       212 --m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~----~~~  257 (342)
                        +                          +++||+|||+   .+|+||||||+||+++.+.  ++.+++....    ...
T Consensus        94 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  170 (284)
T 2vgo_A           94 EFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRR  170 (284)
T ss_dssp             CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSCBC
T ss_pred             EeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEEcCCCCEEEecccccccCcccccc
Confidence              1                          8999999999   9999999999999999874  4444433211    123


Q ss_pred             ccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHH
Q 039505          258 TIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAM  311 (342)
Q Consensus       258 ~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~  311 (342)
                      ...||+.|+|                          ||+.|+.......  . . ..+.....  ..+......+.+++.
T Consensus       171 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~-~-~~~~~~~~--~~~~~~~~~~~~li~  244 (284)
T 2vgo_A          171 TMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE--T-H-RRIVNVDL--KFPPFLSDGSKDLIS  244 (284)
T ss_dssp             CCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH--H-H-HHHHTTCC--CCCTTSCHHHHHHHH
T ss_pred             cccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH--H-H-HHHhcccc--CCCCcCCHHHHHHHH
Confidence            3578899988                          8888887543221  0 0 11111111  112223345889999


Q ss_pred             HcccccCCCCCCHHHHHH--HHHhcc
Q 039505          312 ASVSSKVNRRPLMNQVVM--VREQGN  335 (342)
Q Consensus       312 ~Cl~~~P~~RPsm~eV~~--~L~~i~  335 (342)
                      +|++.+|++|||+.++++  .++...
T Consensus       245 ~~l~~~p~~Rps~~~ll~h~~~~~~~  270 (284)
T 2vgo_A          245 KLLRYHPPQRLPLKGVMEHPWVKANS  270 (284)
T ss_dssp             HHSCSSGGGSCCHHHHHTCHHHHHHC
T ss_pred             HHhhcCHhhCCCHHHHhhCHHHHhhc
Confidence            999999999999999985  454433

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.76  E-value=4.3e-19  Score=171.15  Aligned_cols=169  Identities=16%  Similarity=0.132  Sum_probs=108.8

Q ss_pred             HHHHHHHhhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCC------CCC-cc--------------EE-EeeC
Q 039505          153 LELSLRVTNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSS------QGH-VP--------------IV-ECHV  206 (342)
Q Consensus       153 ~~~l~~at~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~------~~~-~~--------------Lv-~c~~  206 (342)
                      +++.....++|.  ++||+|+||+||+|+...+  .||||++++...      ... .+              +. ++..
T Consensus        53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~  132 (412)
T 2vd5_A           53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD  132 (412)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred             hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence            344444567888  8999999999999999754  999999864210      000 01              33 3333


Q ss_pred             C---cEEE--E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCC
Q 039505          207 G---ALIT--I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGG  252 (342)
Q Consensus       207 ~---~lv~--m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~  252 (342)
                      .   ++|+  +                           ++.||+|||+   .+|+||||||+|||++.+  .++.+++..
T Consensus       133 ~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILld~~g~vkL~DFGla  209 (412)
T 2vd5_A          133 ENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRLADFGSC  209 (412)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             CCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccCHHHeeecCCCCEEEeechhh
Confidence            3   4444  2                           8899999999   999999999999999988  444444432


Q ss_pred             Cc-------cccccccCcceee---------------------------------cCCCCcccccccc-cccccc--ccc
Q 039505          253 TH-------MSTTIAGTAGFLN---------------------------------TKNPVISKSIENG-NSHLRD--KST  289 (342)
Q Consensus       253 ~~-------~~~~~~Gt~~y~a---------------------------------tG~~P~~~~~~~~-~~~l~~--~~~  289 (342)
                      ..       .....+||+.|+|                                 ||+.||....... ...+..  ...
T Consensus       210 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~  289 (412)
T 2vd5_A          210 LKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHL  289 (412)
T ss_dssp             EECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHC
T ss_pred             eeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCc
Confidence            11       1223589999987                                 7888886543221 001111  001


Q ss_pred             ccccCCCCCChHHHHHHHHHHHHcccccCCCC---CCHHHHHH
Q 039505          290 VDLSFKGEFDIISVGKAVEIAMASVSSKVNRR---PLMNQVVM  329 (342)
Q Consensus       290 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~R---Psm~eV~~  329 (342)
                      .-|..    +......+.+++.+||. +|++|   |++.|+.+
T Consensus       290 ~~p~~----~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~  327 (412)
T 2vd5_A          290 SLPLV----DEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT  327 (412)
T ss_dssp             CCC--------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred             CCCcc----ccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence            11111    12234458889999999 99998   68988864

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.75  E-value=5.2e-19  Score=168.11  Aligned_cols=80  Identities=29%  Similarity=0.449  Sum_probs=58.0

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC---cc----------------------EE-Eee----C
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH---VP----------------------IV-ECH----V  206 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~---~~----------------------Lv-~c~----~  206 (342)
                      +.|.  +.||+|+||+||+|+...+  .||||+++.......   ++                      ++ ++.    .
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~  116 (397)
T 1wak_A           37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVN  116 (397)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETT
T ss_pred             CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCC
Confidence            3455  8999999999999998655  899999975321000   00                      33 332    1


Q ss_pred             C---cEEE--E---------------------------ehhhhhhhhccCCC-CeeeCCCCcceEEecCC
Q 039505          207 G---ALIT--I---------------------------PKEGLEYLHQGLKH-PIIQRDMKSTNILLNEK  243 (342)
Q Consensus       207 ~---~lv~--m---------------------------ia~gL~yLH~~~~~-~IiHrDlKp~NILLd~~  243 (342)
                      +   ++|+  +                           +++||+|||+   . +|+||||||+|||++.+
T Consensus       117 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~givHrDikp~NIll~~~  183 (397)
T 1wak_A          117 GTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHT---KCRIIHTDIKPENILLSVN  183 (397)
T ss_dssp             EEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECCCCSGGGEEECCC
T ss_pred             CceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHeeEecc
Confidence            2   4444  1                           8999999999   7 99999999999999854

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.75  E-value=2.6e-18  Score=157.28  Aligned_cols=162  Identities=15%  Similarity=0.180  Sum_probs=106.5

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-------------c---------------EE-EeeCC
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-------------P---------------IV-ECHVG  207 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-------------~---------------Lv-~c~~~  207 (342)
                      ++|.  +.||+|+||.||+|....+  .||||+++........             +               ++ ++...
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~   96 (298)
T 1phk_A           17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN   96 (298)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             hccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccC
Confidence            4555  8999999999999999754  9999999765421110             0               44 44443


Q ss_pred             ---cEEE--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc
Q 039505          208 ---ALIT--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH  254 (342)
Q Consensus       208 ---~lv~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~  254 (342)
                         ++|+  +                          +++||+|||+   .+|+||||||+||+++.+.  ++.+++....
T Consensus        97 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~  173 (298)
T 1phk_A           97 TFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQ  173 (298)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             CeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEcCCCcEEEecccchhh
Confidence               4444  2                          8999999999   9999999999999999883  4444332211


Q ss_pred             -----cccccccCcceee--------------------------------cCCCCccccccccccccccccccc--ccCC
Q 039505          255 -----MSTTIAGTAGFLN--------------------------------TKNPVISKSIENGNSHLRDKSTVD--LSFK  295 (342)
Q Consensus       255 -----~~~~~~Gt~~y~a--------------------------------tG~~P~~~~~~~~~~~l~~~~~~d--~~l~  295 (342)
                           ......||+.|+|                                ||+.|+.......   .. ..+..  ....
T Consensus       174 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---~~-~~~~~~~~~~~  249 (298)
T 1phk_A          174 LDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML---ML-RMIMSGNYQFG  249 (298)
T ss_dssp             CCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HH-HHHHHTCCCCC
T ss_pred             cCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHH---HH-HHHhcCCcccC
Confidence                 1223567888876                                7777765432211   00 00111  1111


Q ss_pred             CCCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          296 GEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       296 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ..........+.+++.+||+.+|++|||+.|+++
T Consensus       250 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          250 SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             TTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             cccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence            1112234556889999999999999999999985

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.75  E-value=8.1e-19  Score=160.69  Aligned_cols=160  Identities=23%  Similarity=0.241  Sum_probs=95.5

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC-----cc--------------EE-EeeCC---cEEE--
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH-----VP--------------IV-ECHVG---ALIT--  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~-----~~--------------Lv-~c~~~---~lv~--  211 (342)
                      ++|.  +.||+|+||.||+|....+  .||||++........     .+              ++ ++...   ++|+  
T Consensus        15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   94 (303)
T 2vwi_A           15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKL   94 (303)
T ss_dssp             CCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEEC
T ss_pred             hhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehh
Confidence            3455  8999999999999987543  999999865432111     11              23 33222   3333  


Q ss_pred             E----------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCccccCCCCCc---
Q 039505          212 I----------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH---  254 (342)
Q Consensus       212 m----------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~~~~~~~~~~---  254 (342)
                      +                                  +++||+|||+   .+|+||||||+|||++.+..+...+++..   
T Consensus        95 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  171 (303)
T 2vwi_A           95 LSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK---NGQIHRDVKAGNILLGEDGSVQIADFGVSAFL  171 (303)
T ss_dssp             CTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCHHHHHC
T ss_pred             ccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCCChhhEEEcCCCCEEEEeccchhee
Confidence            1                                  7899999999   89999999999999998843333232211   


Q ss_pred             ----------cccccccCcceee---------------------------cCCCCcccccccccccccc----------c
Q 039505          255 ----------MSTTIAGTAGFLN---------------------------TKNPVISKSIENGNSHLRD----------K  287 (342)
Q Consensus       255 ----------~~~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~~~~l~~----------~  287 (342)
                                ......||+.|+|                           ||+.|+.......  .+..          .
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~  249 (303)
T 2vwi_A          172 ATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK--VLMLTLQNDPPSLET  249 (303)
T ss_dssp             C---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG--HHHHHHTSSCCCTTC
T ss_pred             ccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh--HHHHHhccCCCcccc
Confidence                      1123568888887                           8999987643322  1100          0


Q ss_pred             ccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          288 STVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       288 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ...++..    .......+.+++.+||+.+|++|||+.++++
T Consensus       250 ~~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          250 GVQDKEM----LKKYGKSFRKMISLCLQKDPEKRPTAAELLR  287 (303)
T ss_dssp             -----CC----CCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             ccccchh----hhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            0111111    1122345888999999999999999999986

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.75  E-value=9.6e-19  Score=163.60  Aligned_cols=156  Identities=20%  Similarity=0.235  Sum_probs=105.8

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc---------------------EE-EeeCC---cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP---------------------IV-ECHVG---ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~---------------------Lv-~c~~~---~lv~--m---  212 (342)
                      +.||+|+||.||++....+  .||+|++..........                     ++ ++...   ++++  +   
T Consensus        47 ~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  126 (335)
T 2owb_A           47 RFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRR  126 (335)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTC
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCCCC
Confidence            8999999999999999765  89999986543221110                     44 55444   3343  1   


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------ccccccc
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIAG  261 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~G  261 (342)
                                             +++||+|||+   .+|+||||||+|||++.+  .++.+++....      ......|
T Consensus       127 ~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g  203 (335)
T 2owb_A          127 SLLELHKRRKALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCG  203 (335)
T ss_dssp             BHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCS
T ss_pred             CHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCCEecCCCchhEEEcCCCCEEEeeccCceecccCcccccccCC
Confidence                                   8999999999   899999999999999988  34444433211      1223578


Q ss_pred             Ccceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHccc
Q 039505          262 TAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVS  315 (342)
Q Consensus       262 t~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~  315 (342)
                      |+.|+|                          ||+.|+.......  .+.........+.    ......+.+++.+||+
T Consensus       204 t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~li~~~l~  277 (335)
T 2owb_A          204 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE--TYLRIKKNEYSIP----KHINPVAASLIQKMLQ  277 (335)
T ss_dssp             CCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH--HHHHHHHTCCCCC----TTSCHHHHHHHHHHTC
T ss_pred             CccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH--HHHHHhcCCCCCC----ccCCHHHHHHHHHHcc
Confidence            999998                          8888887543221  0000000111121    2223457889999999


Q ss_pred             ccCCCCCCHHHHHH
Q 039505          316 SKVNRRPLMNQVVM  329 (342)
Q Consensus       316 ~~P~~RPsm~eV~~  329 (342)
                      .+|++|||+.|+++
T Consensus       278 ~dp~~Rps~~ell~  291 (335)
T 2owb_A          278 TDPTARPTINELLN  291 (335)
T ss_dssp             SSGGGSCCGGGGGG
T ss_pred             CChhHCcCHHHHhc
Confidence            99999999999985

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.75  E-value=1.9e-18  Score=158.72  Aligned_cols=160  Identities=18%  Similarity=0.183  Sum_probs=104.7

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCC----CCc----c--------------EE-Eee--CC---c
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQ----GHV----P--------------IV-ECH--VG---A  208 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~----~~~----~--------------Lv-~c~--~~---~  208 (342)
                      ++|.  +.||+|+||.||+|....+  .||||+++.....    ...    +              ++ ++.  +.   +
T Consensus         5 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (305)
T 2wtk_C            5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY   84 (305)
T ss_dssp             CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEE
T ss_pred             cceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEE
Confidence            4555  8999999999999998654  9999998653210    000    0              44 442  22   4


Q ss_pred             EEE--E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc---
Q 039505          209 LIT--I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH---  254 (342)
Q Consensus       209 lv~--m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~---  254 (342)
                      +|+  +                           +++||+|||+   .+|+||||||+|||++.+.  ++.+++....   
T Consensus        85 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~  161 (305)
T 2wtk_C           85 MVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHP  161 (305)
T ss_dssp             EEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred             EEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEcCCCcEEeeccccccccCc
Confidence            444  1                           8899999999   9999999999999999883  3444332211   


Q ss_pred             -----cccccccCcceee----------------------------cCCCCcccccccccccccccccccccCCCCCChH
Q 039505          255 -----MSTTIAGTAGFLN----------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDII  301 (342)
Q Consensus       255 -----~~~~~~Gt~~y~a----------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~  301 (342)
                           ......||+.|+|                            ||+.|+.......   +.. .+.....  ..+..
T Consensus       162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~-~i~~~~~--~~~~~  235 (305)
T 2wtk_C          162 FAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYK---LFE-NIGKGSY--AIPGD  235 (305)
T ss_dssp             TCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHH-HHHHCCC--CCCSS
T ss_pred             cccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHH---HHH-HHhcCCC--CCCCc
Confidence                 1123468888887                            7888876543211   000 0001000  11223


Q ss_pred             HHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          302 SVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       302 ~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ....+.+++.+||+.+|++|||+.|+++
T Consensus       236 ~~~~l~~li~~~l~~dp~~Rps~~~ll~  263 (305)
T 2wtk_C          236 CGPPLSDLLKGMLEYEPAKRFSIRQIRQ  263 (305)
T ss_dssp             SCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             cCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            3445889999999999999999999985

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.75  E-value=1e-18  Score=165.34  Aligned_cols=166  Identities=19%  Similarity=0.244  Sum_probs=106.5

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-----c--------------EE-EeeCC--------c
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-----P--------------IV-ECHVG--------A  208 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-----~--------------Lv-~c~~~--------~  208 (342)
                      +.|.  +.||+|+||.||+|....+  .||||++.........     +              ++ ++...        +
T Consensus        27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~  106 (364)
T 3qyz_A           27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY  106 (364)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred             ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEE
Confidence            4455  8999999999999998755  8999999754322110     1              22 33211        3


Q ss_pred             EEE--E------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCcc-----
Q 039505          209 LIT--I------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHM-----  255 (342)
Q Consensus       209 lv~--m------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~~-----  255 (342)
                      +++  +                        +++||+|||+   .+|+||||||+|||++.+.  ++.+++.....     
T Consensus       107 iv~e~~~~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~  183 (364)
T 3qyz_A          107 IVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD  183 (364)
T ss_dssp             EEEECCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGC
T ss_pred             EEEcccCcCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChHhEEECCCCCEEEEeCcceEecCCCCC
Confidence            333  1                        8999999999   9999999999999999884  44444332111     


Q ss_pred             ----ccccccCcceee---------------------------cCCCCcccccccc-cccccc------cc----ccc--
Q 039505          256 ----STTIAGTAGFLN---------------------------TKNPVISKSIENG-NSHLRD------KS----TVD--  291 (342)
Q Consensus       256 ----~~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~-~~~l~~------~~----~~d--  291 (342)
                          .....||++|+|                           ||+.||....... ...+..      .+    ..+  
T Consensus       184 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  263 (364)
T 3qyz_A          184 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK  263 (364)
T ss_dssp             BCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHH
T ss_pred             ccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhh
Confidence                123478999998                           8999987653221 000000      00    000  


Q ss_pred             -----ccC--CCCC-----ChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          292 -----LSF--KGEF-----DIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       292 -----~~l--~~~~-----~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                           ..+  ....     .......+.+++.+||+.||++|||+.|+++
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  313 (364)
T 3qyz_A          264 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA  313 (364)
T ss_dssp             HHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                 000  0000     0122345889999999999999999999985

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.74  E-value=9.1e-19  Score=162.62  Aligned_cols=169  Identities=11%  Similarity=0.087  Sum_probs=108.3

Q ss_pred             cccCcCCCeeEEEEEE-C-CC-eEEEEEccCCCCCC---Ccc--------------------EE-EeeCC---cEEE--E
Q 039505          165 RVPYKGGFITVYHGQL-V-KS-EVAMKMLSPSSSQG---HVP--------------------IV-ECHVG---ALIT--I  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~-~-~~-~vAVK~l~~~~~~~---~~~--------------------Lv-~c~~~---~lv~--m  212 (342)
                      +.||+|+||+||+|.. . ++ .||||+++......   ..+                    ++ ++...   ++|+  +
T Consensus        20 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~   99 (339)
T 1z57_A           20 DTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL   99 (339)
T ss_dssp             EEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEECC
T ss_pred             EEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEcCC
Confidence            8999999999999987 3 34 89999986532100   000                    33 33333   4443  1


Q ss_pred             ---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecC-------------------C--C
Q 039505          213 ---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNE-------------------K--S  244 (342)
Q Consensus       213 ---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~-------------------~--a  244 (342)
                                                 +++||+|||+   .+|+||||||+|||++.                   +  .
T Consensus       100 ~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (339)
T 1z57_A          100 GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHS---NKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDI  176 (339)
T ss_dssp             CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCE
T ss_pred             CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeccccccccCCccccccccccCCCc
Confidence                                       8999999999   99999999999999987                   2  3


Q ss_pred             ccccCCCCCc---cccccccCcceee--------------------------cCCCCcccccccccccccc-------c-
Q 039505          245 RISPVEGGTH---MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRD-------K-  287 (342)
Q Consensus       245 ~~~~~~~~~~---~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~-------~-  287 (342)
                      ++.+++....   ......||+.|+|                          ||+.|+...........+.       . 
T Consensus       177 kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~  256 (339)
T 1z57_A          177 KVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKH  256 (339)
T ss_dssp             EECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHH
T ss_pred             eEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence            4444433221   1233678999998                          8999987543221000000       0 


Q ss_pred             --------ccc---------------------cccC-CCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHH--HHhcc
Q 039505          288 --------STV---------------------DLSF-KGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMV--REQGN  335 (342)
Q Consensus       288 --------~~~---------------------d~~l-~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~--L~~i~  335 (342)
                              ...                     .+.. ...........+.+++.+||+.||++|||+.|+++.  ++.++
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  336 (339)
T 1z57_A          257 MIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLK  336 (339)
T ss_dssp             HHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGGG
T ss_pred             HHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHHHh
Confidence                    000                     0000 001123446778999999999999999999999843  55555


Q ss_pred             C
Q 039505          336 G  336 (342)
Q Consensus       336 ~  336 (342)
                      +
T Consensus       337 ~  337 (339)
T 1z57_A          337 K  337 (339)
T ss_dssp             C
T ss_pred             c
Confidence            4

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.74  E-value=1.8e-18  Score=159.63  Aligned_cols=156  Identities=18%  Similarity=0.336  Sum_probs=102.4

Q ss_pred             HhhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC----------cc------------------EE-Eee
Q 039505          159 VTNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH----------VP------------------IV-ECH  205 (342)
Q Consensus       159 at~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~----------~~------------------Lv-~c~  205 (342)
                      ..++|.  +.||+|+||.||+|....+  .||||++........          .+                  ++ ++.
T Consensus        29 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~  108 (312)
T 2iwi_A           29 FEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFE  108 (312)
T ss_dssp             ----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-
T ss_pred             hhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEe
Confidence            445666  8999999999999988644  999999976532110          00                  33 333


Q ss_pred             CC---cEEE---E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEec-CC--CccccCC
Q 039505          206 VG---ALIT---I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLN-EK--SRISPVE  250 (342)
Q Consensus       206 ~~---~lv~---m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd-~~--a~~~~~~  250 (342)
                      ..   ++++   +                          +++||+|||+   .+|+||||||+|||++ ++  .++.+++
T Consensus       109 ~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~kl~dfg  185 (312)
T 2iwi_A          109 TQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHS---RGVVHRDIKDENILIDLRRGCAKLIDFG  185 (312)
T ss_dssp             ----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH---HTEECCCCSGGGEEEETTTTEEEECCCS
T ss_pred             cCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChhhEEEeCCCCeEEEEEcc
Confidence            22   3333   1                          8999999999   8999999999999998 55  4444443


Q ss_pred             CCCc----cccccccCcceee---------------------------cCCCCcccccccccccccccccccccCCCCCC
Q 039505          251 GGTH----MSTTIAGTAGFLN---------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFD  299 (342)
Q Consensus       251 ~~~~----~~~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~  299 (342)
                      ....    ......||..|+|                           ||+.|+.......          +...  ..+
T Consensus       186 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----------~~~~--~~~  253 (312)
T 2iwi_A          186 SGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEIL----------EAEL--HFP  253 (312)
T ss_dssp             SCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHH----------HTCC--CCC
T ss_pred             hhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHHh----------hhcc--CCc
Confidence            3211    1233568888887                           7888876432111          1111  112


Q ss_pred             hHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          300 IISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       300 ~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ......+.+++.+||+.+|++|||+.|+++
T Consensus       254 ~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  283 (312)
T 2iwi_A          254 AHVSPDCCALIRRCLAPKPSSRPSLEEILL  283 (312)
T ss_dssp             TTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             ccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            223345888999999999999999999986

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.74  E-value=1.5e-18  Score=164.63  Aligned_cols=162  Identities=17%  Similarity=0.145  Sum_probs=99.2

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC------cc--------------EE-EeeCC---------cEEE-
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH------VP--------------IV-ECHVG---------ALIT-  211 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~------~~--------------Lv-~c~~~---------~lv~-  211 (342)
                      +.||+|+||.||+|....+  .||||++........      ++              ++ ++...         ++|+ 
T Consensus        31 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~e  110 (367)
T 1cm8_A           31 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMP  110 (367)
T ss_dssp             EEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEE
T ss_pred             EEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEEe
Confidence            8899999999999998654  999999965432211      01              22 33221         3444 


Q ss_pred             -E------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc---ccccccc
Q 039505          212 -I------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH---MSTTIAG  261 (342)
Q Consensus       212 -m------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~---~~~~~~G  261 (342)
                       +                        +++||+|||+   .+|+||||||+|||++.+.  ++.+++....   ......|
T Consensus       111 ~~~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~  187 (367)
T 1cm8_A          111 FMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVV  187 (367)
T ss_dssp             CCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECCSSCCSSCS
T ss_pred             cCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCHHHEEEcCCCCEEEEeeecccccccccCcCcC
Confidence             2                        8999999999   9999999999999999884  4444443321   1234678


Q ss_pred             Ccceee---------------------------cCCCCcccccccc-cccccc------ccc------------cc--cc
Q 039505          262 TAGFLN---------------------------TKNPVISKSIENG-NSHLRD------KST------------VD--LS  293 (342)
Q Consensus       262 t~~y~a---------------------------tG~~P~~~~~~~~-~~~l~~------~~~------------~d--~~  293 (342)
                      |++|+|                           ||+.||....... ...+..      .+.            +.  +.
T Consensus       188 t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  267 (367)
T 1cm8_A          188 TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPE  267 (367)
T ss_dssp             CGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCC
T ss_pred             CCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCC
Confidence            999998                           8999887543211 000000      000            00  00


Q ss_pred             CC----CCCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          294 FK----GEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       294 l~----~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ..    ..........+.+++.+|++.||++|||+.|+++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~  307 (367)
T 1cm8_A          268 LEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA  307 (367)
T ss_dssp             CCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence            00    0011223456889999999999999999999986

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.74  E-value=1.4e-18  Score=167.51  Aligned_cols=102  Identities=14%  Similarity=0.120  Sum_probs=67.9

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc---cccccccCcceee--------------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH---MSTTIAGTAGFLN--------------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~---~~~~~~Gt~~y~a--------------------  267 (342)
                      +++||+|||+   .+|+||||||+|||++.+  .++.+++....   .....+| +.|+|                    
T Consensus       220 i~~aL~~LH~---~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~  295 (413)
T 3dzo_A          220 VIRLLASLHH---YGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMT  295 (413)
T ss_dssp             HHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEEC
T ss_pred             HHHHHHHHHh---CCcccCCcccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCC
Confidence            8899999999   999999999999999998  44444433211   1222455 66665                    


Q ss_pred             ----------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHH
Q 039505          268 ----------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVV  328 (342)
Q Consensus       268 ----------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~  328 (342)
                                      ||+.||.......        ..+..+...  ...+..+.+++.+||+.+|++||++.+++
T Consensus       296 ~~~DvwSlGvil~elltg~~Pf~~~~~~~--------~~~~~~~~~--~~~~~~~~~li~~~l~~dP~~Rpt~~~~l  362 (413)
T 3dzo_A          296 FAFDTWTLGLAIYWIWCADLPNTDDAALG--------GSEWIFRSC--KNIPQPVRALLEGFLRYPKEDRLLPLQAM  362 (413)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCCCCTTGGGS--------CSGGGGSSC--CCCCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred             chhhHHHHHHHHHHHHHCCCCCCCcchhh--------hHHHHHhhc--ccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence                            6777776543221        111111110  12235588999999999999999987765

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.74  E-value=1.5e-18  Score=162.69  Aligned_cols=171  Identities=13%  Similarity=0.156  Sum_probs=107.6

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC-----cc--------------EE-EeeC------C--c
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH-----VP--------------IV-ECHV------G--A  208 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~-----~~--------------Lv-~c~~------~--~  208 (342)
                      ++|.  +.||+|+||.||+|+...+  .||||++........     ++              ++ ++..      .  +
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   90 (353)
T 2b9h_A           11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVY   90 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEE
T ss_pred             cceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEE
Confidence            4565  8999999999999998754  899999965432111     11              33 3332      1  3


Q ss_pred             EEE--E------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCcc-----
Q 039505          209 LIT--I------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHM-----  255 (342)
Q Consensus       209 lv~--m------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~~-----  255 (342)
                      +++  +                        +++||+|||+   .+|+||||||+|||++.+.  ++.+++.....     
T Consensus        91 lv~e~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~  167 (353)
T 2b9h_A           91 IIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA  167 (353)
T ss_dssp             EEECCCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECC----
T ss_pred             EEEeccCccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEcCCCcEEEEecccccccccccc
Confidence            333  1                        8999999999   9999999999999999883  44443322110     


Q ss_pred             -----------ccccccCcceee---------------------------cCCCCcccccccc-cccccc----------
Q 039505          256 -----------STTIAGTAGFLN---------------------------TKNPVISKSIENG-NSHLRD----------  286 (342)
Q Consensus       256 -----------~~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~-~~~l~~----------  286 (342)
                                 .....||+.|+|                           ||+.||....... ...+..          
T Consensus       168 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  247 (353)
T 2b9h_A          168 DNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDND  247 (353)
T ss_dssp             ------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTT
T ss_pred             cccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhcc
Confidence                       112468899988                           8888887543211 000000          


Q ss_pred             ---------ccccc--ccCCCC----CChHHHHHHHHHHHHcccccCCCCCCHHHHHH--HHHhc
Q 039505          287 ---------KSTVD--LSFKGE----FDIISVGKAVEIAMASVSSKVNRRPLMNQVVM--VREQG  334 (342)
Q Consensus       287 ---------~~~~d--~~l~~~----~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~--~L~~i  334 (342)
                               .+...  +.....    ........+.+++.+||+.||++|||+.|+++  .++..
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  312 (353)
T 2b9h_A          248 LRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTY  312 (353)
T ss_dssp             TTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             ccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCcccccc
Confidence                     00000  000000    01123455789999999999999999999986  34443

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.74  E-value=1.5e-18  Score=159.07  Aligned_cols=163  Identities=18%  Similarity=0.179  Sum_probs=102.5

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc------------------EE-EeeCC---cEEE--E
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP------------------IV-ECHVG---ALIT--I  212 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~------------------Lv-~c~~~---~lv~--m  212 (342)
                      +.|.  +.||+|+||.||+|.+..+  .||+|++..........                  ++ ++...   ++|+  +
T Consensus        19 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   98 (302)
T 2j7t_A           19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFC   98 (302)
T ss_dssp             GTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECC
T ss_pred             cceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeC
Confidence            3454  8899999999999999754  99999987654332211                  34 44433   4444  2


Q ss_pred             ---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCccccCCCCCc--------ccc
Q 039505          213 ---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH--------MST  257 (342)
Q Consensus       213 ---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~~~~~~~~~~--------~~~  257 (342)
                                                 +++||.|||+   .+|+||||||+|||++.+..+...+++..        ...
T Consensus        99 ~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  175 (302)
T 2j7t_A           99 PGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRD  175 (302)
T ss_dssp             TTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC--
T ss_pred             CCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEECCCCCEEEEECCCCccccccccccc
Confidence                                       8899999999   89999999999999998844444344321        112


Q ss_pred             ccccCcceee-------------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHH
Q 039505          258 TIAGTAGFLN-------------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKA  306 (342)
Q Consensus       258 ~~~Gt~~y~a-------------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l  306 (342)
                      ...||+.|+|                               ||+.|+.......  .+......++. ....+......+
T Consensus       176 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~l  252 (302)
T 2j7t_A          176 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR--VLLKIAKSDPP-TLLTPSKWSVEF  252 (302)
T ss_dssp             ---CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHSCCC-CCSSGGGSCHHH
T ss_pred             cccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH--HHHHHhccCCc-ccCCccccCHHH
Confidence            3467888877                               6777766433211  00000000000 001122334568


Q ss_pred             HHHHHHcccccCCCCCCHHHHHH
Q 039505          307 VEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       307 ~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      .+++.+||+.+|++|||+.++++
T Consensus       253 ~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          253 RDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             HHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             HHHHHHHcccChhhCCCHHHHhc
Confidence            89999999999999999999875

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.74  E-value=9.5e-19  Score=163.69  Aligned_cols=163  Identities=15%  Similarity=0.178  Sum_probs=104.3

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC---eEEEEEccCCCCCCC---cc--------------------EE-EeeCC---cE
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS---EVAMKMLSPSSSQGH---VP--------------------IV-ECHVG---AL  209 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~---~vAVK~l~~~~~~~~---~~--------------------Lv-~c~~~---~l  209 (342)
                      +|.  +.||+|+||+||+|.....   .||||+++.......   .+                    +. ++...   ++
T Consensus        20 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l   99 (355)
T 2eu9_A           20 RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCI   99 (355)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEE
T ss_pred             cEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEE
Confidence            454  8999999999999998532   899999975321000   00                    22 23222   33


Q ss_pred             EE--E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEec-------------------
Q 039505          210 IT--I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLN-------------------  241 (342)
Q Consensus       210 v~--m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd-------------------  241 (342)
                      |+  +                           +++||+|||+   .+|+||||||+|||++                   
T Consensus       100 v~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~  176 (355)
T 2eu9_A          100 AFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHE---NQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSV  176 (355)
T ss_dssp             EEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEE
T ss_pred             EEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeccccccccccccccccccc
Confidence            33  1                           8999999999   8999999999999993                   


Q ss_pred             CC--CccccCCCCCc---cccccccCcceee--------------------------cCCCCcccccccccccccc-ccc
Q 039505          242 EK--SRISPVEGGTH---MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRD-KST  289 (342)
Q Consensus       242 ~~--a~~~~~~~~~~---~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~-~~~  289 (342)
                      .+  .++.+++....   ......||+.|+|                          ||+.||.......  .+.. ...
T Consensus       177 ~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~--~~~~~~~~  254 (355)
T 2eu9_A          177 KNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE--HLVMMEKI  254 (355)
T ss_dssp             SCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHH
T ss_pred             CCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHH
Confidence            33  34444443321   1234679999998                          8999987643221  0000 000


Q ss_pred             c------------------ccc--C-------------------CCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          290 V------------------DLS--F-------------------KGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       290 ~------------------d~~--l-------------------~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      .                  ...  .                   ...........+.+++.+||+.||++|||+.|+++
T Consensus       255 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~  333 (355)
T 2eu9_A          255 LGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALL  333 (355)
T ss_dssp             HCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             cCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            0                  000  0                   00112233557889999999999999999999984

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.74  E-value=1.9e-18  Score=164.00  Aligned_cols=166  Identities=13%  Similarity=0.121  Sum_probs=102.5

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc------c--------------EE-EeeCC--------
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV------P--------------IV-ECHVG--------  207 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~------~--------------Lv-~c~~~--------  207 (342)
                      ++|.  +.||+|+||.||+|.....  .||||++.........      +              ++ ++...        
T Consensus        25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~  104 (371)
T 2xrw_A           25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD  104 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred             hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence            3455  8999999999999998754  8999999754321110      1              33 33221        


Q ss_pred             -cEEE--E-----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc----
Q 039505          208 -ALIT--I-----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM----  255 (342)
Q Consensus       208 -~lv~--m-----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~----  255 (342)
                       ++|+  +                       +++||+|||+   .+|+||||||+|||++.+  .++.+++.....    
T Consensus       105 ~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~  181 (371)
T 2xrw_A          105 VYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF  181 (371)
T ss_dssp             EEEEEECCSEEHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCCCC--------
T ss_pred             eEEEEEcCCCCHHHHHhhccCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEEEeeccccccccc
Confidence             3333  1                       8899999999   999999999999999988  444444433211    


Q ss_pred             -ccccccCcceee--------------------------cCCCCcccccccc-cccccc------cc-----------c-
Q 039505          256 -STTIAGTAGFLN--------------------------TKNPVISKSIENG-NSHLRD------KS-----------T-  289 (342)
Q Consensus       256 -~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~-~~~l~~------~~-----------~-  289 (342)
                       .....||+.|+|                          ||+.||....... ...++.      .+           . 
T Consensus       182 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  261 (371)
T 2xrw_A          182 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYV  261 (371)
T ss_dssp             --------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHH
T ss_pred             ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHH
Confidence             233578999998                          8999987643211 000000      00           0 


Q ss_pred             -ccccCC-------------CC---CChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          290 -VDLSFK-------------GE---FDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       290 -~d~~l~-------------~~---~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                       -.+...             ..   ........+.+++.+||+.||++|||+.|+++
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  318 (371)
T 2xrw_A          262 ENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ  318 (371)
T ss_dssp             HSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             hhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence             000000             00   01122567899999999999999999999985

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.74  E-value=2.5e-18  Score=159.41  Aligned_cols=174  Identities=15%  Similarity=0.218  Sum_probs=110.8

Q ss_pred             HhhccC--cccCcCCCeeEEEEEEC--CC-eEEEEEccCCCCCCC------cc-----------------EE-Eee----
Q 039505          159 VTNNFE--RVPYKGGFITVYHGQLV--KS-EVAMKMLSPSSSQGH------VP-----------------IV-ECH----  205 (342)
Q Consensus       159 at~~f~--~~lG~G~fG~Vykg~~~--~~-~vAVK~l~~~~~~~~------~~-----------------Lv-~c~----  205 (342)
                      +.++|.  +.||+|+||.||+|+..  ++ .||||++........      .+                 ++ +|.    
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~   88 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   88 (326)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence            446666  89999999999999984  34 899999865432111      01                 44 443    


Q ss_pred             -CC---cEEE--E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCC
Q 039505          206 -VG---ALIT--I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVE  250 (342)
Q Consensus       206 -~~---~lv~--m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~  250 (342)
                       ..   ++++  +                           +++||+|||+   .+|+||||||+|||++.+  .++.+++
T Consensus        89 ~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~gi~H~dlkp~Nili~~~~~~kl~Dfg  165 (326)
T 1blx_A           89 DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFG  165 (326)
T ss_dssp             SSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECSCC
T ss_pred             CCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHHHeEEcCCCCEEEecCc
Confidence             22   3443  1                           8899999999   999999999999999988  4444444


Q ss_pred             CCCc-----cccccccCcceee--------------------------cCCCCcccccccc-cccccc------------
Q 039505          251 GGTH-----MSTTIAGTAGFLN--------------------------TKNPVISKSIENG-NSHLRD------------  286 (342)
Q Consensus       251 ~~~~-----~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~-~~~l~~------------  286 (342)
                      ....     ......||+.|+|                          ||+.||....... ...+..            
T Consensus       166 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  245 (326)
T 1blx_A          166 LARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR  245 (326)
T ss_dssp             SCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCT
T ss_pred             ccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCcc
Confidence            3321     1223578888988                          8999987643211 000000            


Q ss_pred             -----cccccc---cCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHH--HHHhcc
Q 039505          287 -----KSTVDL---SFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM--VREQGN  335 (342)
Q Consensus       287 -----~~~~d~---~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~--~L~~i~  335 (342)
                           ......   .............+.+++.+||+.+|++|||+.|+++  .++.+.
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~  304 (326)
T 1blx_A          246 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLE  304 (326)
T ss_dssp             TCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred             ccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccccc
Confidence                 000000   0000111223456889999999999999999999984  344443

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.74  E-value=1.1e-18  Score=165.64  Aligned_cols=162  Identities=17%  Similarity=0.174  Sum_probs=103.6

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc------c--------------EE-EeeCC---------cEEE-
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV------P--------------IV-ECHVG---------ALIT-  211 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~------~--------------Lv-~c~~~---------~lv~-  211 (342)
                      +.||+|+||+||+|....+  .||||++.........      +              ++ ++...         ++|+ 
T Consensus        48 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e  127 (371)
T 4exu_A           48 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMP  127 (371)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEEE
T ss_pred             eEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEEEc
Confidence            7899999999999998754  9999999764322110      0              23 33322         2333 


Q ss_pred             -E-----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc---cccccccC
Q 039505          212 -I-----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH---MSTTIAGT  262 (342)
Q Consensus       212 -m-----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~---~~~~~~Gt  262 (342)
                       +                       +++||+|||+   .+|+||||||+|||++.+.  ++.+++....   ......||
T Consensus       128 ~~~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~t  204 (371)
T 4exu_A          128 FMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVT  204 (371)
T ss_dssp             CCCEEHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECSTTCC--------CTTCC
T ss_pred             cccccHHHHhhcCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCcCHHHeEECCCCCEEEEecCcccccccCcCCcccC
Confidence             1                       8899999999   8999999999999999884  4444443321   12335788


Q ss_pred             cceee---------------------------cCCCCcccccccc-cccccc------ccc---------------cccc
Q 039505          263 AGFLN---------------------------TKNPVISKSIENG-NSHLRD------KST---------------VDLS  293 (342)
Q Consensus       263 ~~y~a---------------------------tG~~P~~~~~~~~-~~~l~~------~~~---------------~d~~  293 (342)
                      +.|+|                           ||+.||....... ...+..      .+.               ....
T Consensus       205 ~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (371)
T 4exu_A          205 RWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQT  284 (371)
T ss_dssp             CTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCC
T ss_pred             ccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCC
Confidence            88988                           8888887543211 000000      000               0000


Q ss_pred             CCCC---CChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          294 FKGE---FDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       294 l~~~---~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ....   ........+.+++.+||+.+|++|||+.|+++
T Consensus       285 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  323 (371)
T 4exu_A          285 PRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  323 (371)
T ss_dssp             CCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             cchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence            0000   01122456889999999999999999999985

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.74  E-value=3.7e-18  Score=163.79  Aligned_cols=100  Identities=19%  Similarity=0.232  Sum_probs=61.0

Q ss_pred             cccCcCCCeeEEEEEECC---C-eEEEEEccCCCCCCC--cc--------------EE-Eee--CC---cEEE--E----
Q 039505          165 RVPYKGGFITVYHGQLVK---S-EVAMKMLSPSSSQGH--VP--------------IV-ECH--VG---ALIT--I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~---~-~vAVK~l~~~~~~~~--~~--------------Lv-~c~--~~---~lv~--m----  212 (342)
                      ++||+|+||+||+|++.+   + .||||++........  ++              ++ ++.  .+   ++|+  +    
T Consensus        27 ~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~~~l  106 (405)
T 3rgf_A           27 CKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDL  106 (405)
T ss_dssp             CCCC-----EEEEEEESSSSCCCCEEEEECSSSSCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCSEEH
T ss_pred             cEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCCCCH
Confidence            689999999999999863   3 899999975432211  11              22 331  12   3333  1    


Q ss_pred             ------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEe----cCC--CccccCCCCCc--
Q 039505          213 ------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILL----NEK--SRISPVEGGTH--  254 (342)
Q Consensus       213 ------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILL----d~~--a~~~~~~~~~~--  254 (342)
                                                    ++.||+|||+   .+|+||||||+|||+    +.+  .++.+++....  
T Consensus       107 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~  183 (405)
T 3rgf_A          107 WHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN  183 (405)
T ss_dssp             HHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC---
T ss_pred             HHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecC
Confidence                                          8899999999   999999999999999    444  44554443321  


Q ss_pred             -------cccccccCcceee
Q 039505          255 -------MSTTIAGTAGFLN  267 (342)
Q Consensus       255 -------~~~~~~Gt~~y~a  267 (342)
                             ......||++|+|
T Consensus       184 ~~~~~~~~~~~~~gt~~y~a  203 (405)
T 3rgf_A          184 SPLKPLADLDPVVVTFWYRA  203 (405)
T ss_dssp             -------------CCCTTCC
T ss_pred             CCCcccccCCCceecCcccC
Confidence                   1133678999998

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.74  E-value=8.2e-19  Score=159.08  Aligned_cols=165  Identities=15%  Similarity=0.156  Sum_probs=108.7

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc--------------------EE-EeeC--C---cEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP--------------------IV-ECHV--G---ALI  210 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~--------------------Lv-~c~~--~---~lv  210 (342)
                      ++|.  +.||+|+||.||+|....+  .||+|++..........                    ++ +|..  +   +++
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv   85 (279)
T 2w5a_A            6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   85 (279)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEE
T ss_pred             hheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEE
Confidence            4555  8999999999999998754  89999997654221110                    33 3321  1   333


Q ss_pred             E--E------------------------------ehhhhhhhhccCCCC-----eeeCCCCcceEEecCCCccccCCCCC
Q 039505          211 T--I------------------------------PKEGLEYLHQGLKHP-----IIQRDMKSTNILLNEKSRISPVEGGT  253 (342)
Q Consensus       211 ~--m------------------------------ia~gL~yLH~~~~~~-----IiHrDlKp~NILLd~~a~~~~~~~~~  253 (342)
                      +  +                              +++||+|||+   .+     |+||||||+|||++++..+...+++.
T Consensus        86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~  162 (279)
T 2w5a_A           86 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR---RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGL  162 (279)
T ss_dssp             EECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---HC------CCCCCSGGGEEECSSSCEEECCCCH
T ss_pred             EeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhc---ccCCCCeeEEeccchhhEEEcCCCCEEEecCch
Confidence            3  1                              8899999999   66     99999999999999884443333332


Q ss_pred             c--------cccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCC
Q 039505          254 H--------MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFD  299 (342)
Q Consensus       254 ~--------~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~  299 (342)
                      .        ......||+.|+|                          ||+.|+.......   +.. .+..... ...+
T Consensus       163 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~-~i~~~~~-~~~~  237 (279)
T 2w5a_A          163 ARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE---LAG-KIREGKF-RRIP  237 (279)
T ss_dssp             HHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHH-HHHHTCC-CCCC
T ss_pred             heeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHH---HHH-HHhhccc-ccCC
Confidence            1        1123468888888                          8998887653221   111 0111111 1122


Q ss_pred             hHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHh
Q 039505          300 IISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQ  333 (342)
Q Consensus       300 ~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~  333 (342)
                      ......+.+++.+||+.+|++|||+.|+++.+..
T Consensus       238 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~  271 (279)
T 2w5a_A          238 YRYSDELNEIITRMLNLKDYHRPSVEEILENPLI  271 (279)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             cccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence            2334568899999999999999999999986543

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.73  E-value=1.4e-18  Score=165.12  Aligned_cols=103  Identities=15%  Similarity=0.105  Sum_probs=67.5

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc---cccccccCcceee--------------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH---MSTTIAGTAGFLN--------------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~---~~~~~~Gt~~y~a--------------------  267 (342)
                      +++||+|||+   .+|+||||||+|||++.+  .++.+++....   ......| +.|+|                    
T Consensus       215 i~~aL~~LH~---~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~  290 (377)
T 3byv_A          215 VIRLLASLHH---YGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLM  290 (377)
T ss_dssp             HHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEEC
T ss_pred             HHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccC
Confidence            8899999999   899999999999999988  44444433221   1223456 77776                    


Q ss_pred             -----------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          268 -----------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       268 -----------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                                       ||+.||.......        .......  ........+.+++.+||+.+|++|||+.|+++
T Consensus       291 ~~~~DvwSlG~il~elltg~~Pf~~~~~~~--------~~~~~~~--~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  359 (377)
T 3byv_A          291 TFSFDAWALGLVIYWIWCADLPITKDAALG--------GSEWIFR--SCKNIPQPVRALLEGFLRYPKEDRLLPLQAME  359 (377)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCCC------C--------CSGGGGS--SCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred             ChhhhHHHHHHHHHHHHHCCCCCccccccc--------chhhhhh--hccCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence                             7777776543221        0110010  01122345889999999999999999999985

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.73  E-value=1.1e-18  Score=173.74  Aligned_cols=158  Identities=25%  Similarity=0.321  Sum_probs=103.7

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCC---CCCc----c--------------EE-EeeCC---cEEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSS---QGHV----P--------------IV-ECHVG---ALIT  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~---~~~~----~--------------Lv-~c~~~---~lv~  211 (342)
                      ++|.  ++||+|+||.||+|+...+  .||||++.....   ....    +              +. ++...   ++|+
T Consensus       185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm  264 (543)
T 3c4z_A          185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM  264 (543)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence            4555  7899999999999999754  999999964321   1100    1              22 22222   3333


Q ss_pred             --E------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc---
Q 039505          212 --I------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH---  254 (342)
Q Consensus       212 --m------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~---  254 (342)
                        +                              ++.||+|||+   .+|+||||||+|||++.+  .++.+++....   
T Consensus       265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~---~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~  341 (543)
T 3c4z_A          265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA  341 (543)
T ss_dssp             CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHH---cCCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence              1                              8899999999   999999999999999988  44444443311   


Q ss_pred             ---cccccccCcceee--------------------------cCCCCccccccccc-ccccccccccccCCCCCChHHHH
Q 039505          255 ---MSTTIAGTAGFLN--------------------------TKNPVISKSIENGN-SHLRDKSTVDLSFKGEFDIISVG  304 (342)
Q Consensus       255 ---~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~-~~l~~~~~~d~~l~~~~~~~~~~  304 (342)
                         .....+||+.|+|                          ||+.||........ ..+. ..+.....  ..+.....
T Consensus       342 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~-~~i~~~~~--~~p~~~s~  418 (543)
T 3c4z_A          342 GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK-QRVLEQAV--TYPDKFSP  418 (543)
T ss_dssp             TCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHH-HHHHHCCC--CCCTTSCH
T ss_pred             CCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHH-HHHhhccc--CCCcccCH
Confidence               1233589999999                          99999976532210 0111 11111111  12233345


Q ss_pred             HHHHHHHHcccccCCCCCCH
Q 039505          305 KAVEIAMASVSSKVNRRPLM  324 (342)
Q Consensus       305 ~l~~l~~~Cl~~~P~~RPsm  324 (342)
                      .+.+++.+||+.+|++||++
T Consensus       419 ~~~~li~~lL~~dP~~R~~~  438 (543)
T 3c4z_A          419 ASKDFCEALLQKDPEKRLGF  438 (543)
T ss_dssp             HHHHHHHHHSCSSGGGSCCC
T ss_pred             HHHHHHHHhccCCHhHCCCC
Confidence            68889999999999999975

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.73  E-value=4.8e-18  Score=156.73  Aligned_cols=163  Identities=18%  Similarity=0.226  Sum_probs=102.2

Q ss_pred             hhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC--cc--------------EE-EeeCC---cEEE--E-
Q 039505          160 TNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH--VP--------------IV-ECHVG---ALIT--I-  212 (342)
Q Consensus       160 t~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~--~~--------------Lv-~c~~~---~lv~--m-  212 (342)
                      .+.|.  +.||+|+||.||+|....+  .||||++........  .+              ++ ++...   ++++  + 
T Consensus        28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (314)
T 3com_A           28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCG  107 (314)
T ss_dssp             --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCC
Confidence            34565  8999999999999998754  999999976432110  01              33 33333   3333  1 


Q ss_pred             --------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc------cccc
Q 039505          213 --------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH------MSTT  258 (342)
Q Consensus       213 --------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~------~~~~  258 (342)
                                                +++||.|||+   .+|+||||||+||+++.+.  ++.+++....      ....
T Consensus       108 ~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~  184 (314)
T 3com_A          108 AGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT  184 (314)
T ss_dssp             TEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBCC
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccCc
Confidence                                      8899999999   9999999999999999884  4444333211      1223


Q ss_pred             cccCcceee--------------------------cCCCCcccccccccccccc-cccccccCCCCCChHHHHHHHHHHH
Q 039505          259 IAGTAGFLN--------------------------TKNPVISKSIENGNSHLRD-KSTVDLSFKGEFDIISVGKAVEIAM  311 (342)
Q Consensus       259 ~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~l~~~~~~~~~~~l~~l~~  311 (342)
                      ..||+.|+|                          ||+.|+.......  .+.. .....+..  ..+......+.+++.
T Consensus       185 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~l~~li~  260 (314)
T 3com_A          185 VIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR--AIFMIPTNPPPTF--RKPELWSDNFTDFVK  260 (314)
T ss_dssp             CCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHSCCCCC--SSGGGSCHHHHHHHH
T ss_pred             cCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHhcCCCccc--CCcccCCHHHHHHHH
Confidence            568888988                          7888876543221  0000 00001111  112223456889999


Q ss_pred             HcccccCCCCCCHHHHHH
Q 039505          312 ASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       312 ~Cl~~~P~~RPsm~eV~~  329 (342)
                      +||+.+|++|||+.++++
T Consensus       261 ~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          261 QCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             HHTCSCTTTSCCHHHHTT
T ss_pred             HHccCChhhCcCHHHHHh
Confidence            999999999999999974

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.73  E-value=2.5e-18  Score=155.61  Aligned_cols=156  Identities=15%  Similarity=0.137  Sum_probs=96.0

Q ss_pred             cccCcCCCeeEEEEEECC-C-eEEEEEccCCCC---CCC----cc--------------EE-EeeCC---cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSS---QGH----VP--------------IV-ECHVG---ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~---~~~----~~--------------Lv-~c~~~---~lv~--m---  212 (342)
                      +.||+|+||.||+|.... + .||||++.....   ...    ++              ++ ++...   ++++  +   
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   96 (276)
T 2h6d_A           17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGG   96 (276)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred             eeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCCC
Confidence            899999999999999874 4 999999864321   110    00              34 44433   3333  1   


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCccccCCCCCc-------cccccccC
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH-------MSTTIAGT  262 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~~~~~~~~~~-------~~~~~~Gt  262 (342)
                                             +++||+|||+   .+|+||||||+|||++.+..+...+++..       ......||
T Consensus        97 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  173 (276)
T 2h6d_A           97 ELFDYICKHGRVEEMEARRLFQQILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGS  173 (276)
T ss_dssp             BHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH---HCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC----------
T ss_pred             cHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChhhEEECCCCCEEEeecccccccCCCcceecccCC
Confidence                                   8999999999   89999999999999998843333233211       11234677


Q ss_pred             cceee---------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHccc
Q 039505          263 AGFLN---------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVS  315 (342)
Q Consensus       263 ~~y~a---------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~  315 (342)
                      +.|+|                           ||+.|+.......   +.. .+....  ...+......+.+++.+||+
T Consensus       174 ~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---~~~-~~~~~~--~~~~~~~~~~l~~li~~~l~  247 (276)
T 2h6d_A          174 PNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT---LFK-KIRGGV--FYIPEYLNRSVATLLMHMLQ  247 (276)
T ss_dssp             ---CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHH-HHHHCC--CCCCTTSCHHHHHHHHHHTC
T ss_pred             ccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH---HHH-HhhcCc--ccCchhcCHHHHHHHHHHcc
Confidence            88877                           7888876543211   000 000000  01112223458889999999


Q ss_pred             ccCCCCCCHHHHHH
Q 039505          316 SKVNRRPLMNQVVM  329 (342)
Q Consensus       316 ~~P~~RPsm~eV~~  329 (342)
                      .+|++|||+.|+++
T Consensus       248 ~~p~~Rps~~~~l~  261 (276)
T 2h6d_A          248 VDPLKRATIKDIRE  261 (276)
T ss_dssp             SSGGGSCCHHHHHH
T ss_pred             CChhhCCCHHHHHh
Confidence            99999999999986

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.73  E-value=8.1e-18  Score=156.06  Aligned_cols=164  Identities=21%  Similarity=0.244  Sum_probs=103.9

Q ss_pred             HHhhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc------------------EE-EeeC-------C
Q 039505          158 RVTNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP------------------IV-ECHV-------G  207 (342)
Q Consensus       158 ~at~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~------------------Lv-~c~~-------~  207 (342)
                      ...+.|.  +.||+|+||.||+|++..+  .||||++..........                  ++ ++..       +
T Consensus        21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~  100 (326)
T 2x7f_A           21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD  100 (326)
T ss_dssp             CCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCC
T ss_pred             CCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccc
Confidence            3455666  8999999999999998644  99999987543221110                  33 3321       1


Q ss_pred             --cEEE--E----------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCC
Q 039505          208 --ALIT--I----------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGT  253 (342)
Q Consensus       208 --~lv~--m----------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~  253 (342)
                        ++|+  +                            +++||+|||+   .+|+||||||+|||++.+.  ++.+++...
T Consensus       101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~  177 (326)
T 2x7f_A          101 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSA  177 (326)
T ss_dssp             EEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCTTTC
T ss_pred             eEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCcHHHEEEcCCCCEEEeeCcCce
Confidence              3443  1                            8899999999   8999999999999999884  444443322


Q ss_pred             c------cccccccCcceee-------------------------------cCCCCcccccccccccccc-cccccccCC
Q 039505          254 H------MSTTIAGTAGFLN-------------------------------TKNPVISKSIENGNSHLRD-KSTVDLSFK  295 (342)
Q Consensus       254 ~------~~~~~~Gt~~y~a-------------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~l~  295 (342)
                      .      ......||+.|+|                               ||+.|+.......  .+.. .....+.+ 
T Consensus       178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~-  254 (326)
T 2x7f_A          178 QLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR--ALFLIPRNPAPRL-  254 (326)
T ss_dssp             -------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHSCCCCC-
T ss_pred             ecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH--HHHHhhcCccccC-
Confidence            1      1123568888887                               6777765432211  0000 00001111 


Q ss_pred             CCCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          296 GEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       296 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                        ........+.+++.+||+.+|++||++.++++
T Consensus       255 --~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          255 --KSKKWSKKFQSFIESCLVKNHSQRPATEQLMK  286 (326)
T ss_dssp             --SCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             --CccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence              11222345888999999999999999999985

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.73  E-value=3.2e-18  Score=165.97  Aligned_cols=161  Identities=17%  Similarity=0.128  Sum_probs=98.3

Q ss_pred             cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCC-Ccc---------------EE-EeeCC---cEEE--E---------
Q 039505          165 RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQG-HVP---------------IV-ECHVG---ALIT--I---------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~-~~~---------------Lv-~c~~~---~lv~--m---------  212 (342)
                      ++||+|+||+||.+...++ .||||++.....+. ..+               ++ ++..+   ++|+  +         
T Consensus        21 ~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~gsL~~~l~  100 (434)
T 2rio_A           21 KILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVE  100 (434)
T ss_dssp             EEEEECSTTCEEEEEESSSSEEEEEEEEGGGHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCSEEHHHHHH
T ss_pred             CeEeeCCCeEEEEEEEECCeEEEEEEEcHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCCCCHHHHHh
Confidence            7899999999976665566 99999986532110 001               22 22222   2222  1         


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC---------------CccccCCCCCc
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK---------------SRISPVEGGTH  254 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~---------------a~~~~~~~~~~  254 (342)
                                             +++||+|||+   .+|+||||||+|||++.+               .++.+++....
T Consensus       101 ~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~  177 (434)
T 2rio_A          101 SKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK  177 (434)
T ss_dssp             TC------------CCHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEE
T ss_pred             ccCCCchhhhhccchhHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCcccccccccCCCceEEEEccccccee
Confidence                                   8899999999   999999999999999752               34444433211


Q ss_pred             ----------cccccccCcceee---------------------------------c-CCCCcccccccccccccccccc
Q 039505          255 ----------MSTTIAGTAGFLN---------------------------------T-KNPVISKSIENGNSHLRDKSTV  290 (342)
Q Consensus       255 ----------~~~~~~Gt~~y~a---------------------------------t-G~~P~~~~~~~~~~~l~~~~~~  290 (342)
                                ......||++|+|                                 | |+.|+........ .+......
T Consensus       178 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~-~i~~~~~~  256 (434)
T 2rio_A          178 LDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES-NIIRGIFS  256 (434)
T ss_dssp             CCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHH-HHHHTCCC
T ss_pred             cCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHH-HHhcCCCC
Confidence                      1123578888887                                 5 7777754322110 11111111


Q ss_pred             cccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          291 DLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       291 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      .+.+....+......+.+++.+||+.+|++|||+.||++
T Consensus       257 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          257 LDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             CCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             cccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence            111112223455678999999999999999999999975

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.72  E-value=3.9e-18  Score=165.46  Aligned_cols=162  Identities=20%  Similarity=0.209  Sum_probs=98.9

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCC-cc---------------EE-EeeCC---cEEE--E----
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGH-VP---------------IV-ECHVG---ALIT--I----  212 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~-~~---------------Lv-~c~~~---~lv~--m----  212 (342)
                      +|.  ++||+|+||+||.....++ .||||++........ .+               ++ ++...   ++|+  +    
T Consensus        25 ~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~g~L  104 (432)
T 3p23_A           25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAATL  104 (432)
T ss_dssp             EEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCSEEH
T ss_pred             EEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCCCCH
Confidence            455  8999999998554444445 999999965432111 11               33 33333   3333  1    


Q ss_pred             ----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-----Cc--cccCCCCC---------c
Q 039505          213 ----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-----SR--ISPVEGGT---------H  254 (342)
Q Consensus       213 ----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-----a~--~~~~~~~~---------~  254 (342)
                                            +++||+|||+   .+|+||||||+|||++.+     .+  +.+++...         .
T Consensus       105 ~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~  181 (432)
T 3p23_A          105 QEYVEQKDFAHLGLEPITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFS  181 (432)
T ss_dssp             HHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHH---TTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--------
T ss_pred             HHHHHhcCCCccchhHHHHHHHHHHHHHHHHH---CcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCccee
Confidence                                  8899999999   999999999999999642     23  44443221         1


Q ss_pred             cccccccCcceee-----------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHH
Q 039505          255 MSTTIAGTAGFLN-----------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVG  304 (342)
Q Consensus       255 ~~~~~~Gt~~y~a-----------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~  304 (342)
                      ......||++|+|                             | |+.|+..........+.  ....... .........
T Consensus       182 ~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~  258 (432)
T 3p23_A          182 RRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILL--GACSLDC-LHPEKHEDV  258 (432)
T ss_dssp             ----CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHT--TCCCCTT-SCTTCHHHH
T ss_pred             eccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHh--ccCCccc-cCccccccH
Confidence            1233579999998                             5 77776543221100000  0000000 011223445


Q ss_pred             HHHHHHHHcccccCCCCCCHHHHHH
Q 039505          305 KAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       305 ~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      .+.+++.+||+.+|++|||+.||++
T Consensus       259 ~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          259 IARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHHhCCHhhCCCHHHHHh
Confidence            5788999999999999999999983

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.72  E-value=6.7e-18  Score=158.77  Aligned_cols=161  Identities=18%  Similarity=0.196  Sum_probs=103.2

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc------c--------------EE-EeeCC---------cEEE-
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV------P--------------IV-ECHVG---------ALIT-  211 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~------~--------------Lv-~c~~~---------~lv~-  211 (342)
                      +.||+|+||.||+|....+  .||||++.........      +              ++ ++...         ++++ 
T Consensus        30 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e  109 (353)
T 3coi_A           30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMP  109 (353)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEE
T ss_pred             eeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEec
Confidence            8899999999999998754  9999999764322110      1              22 33221         2333 


Q ss_pred             -E-----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc---ccccccC
Q 039505          212 -I-----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM---STTIAGT  262 (342)
Q Consensus       212 -m-----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~---~~~~~Gt  262 (342)
                       +                       +++||+|||+   .+|+||||||+|||++.+  .++.+++.....   .....||
T Consensus       110 ~~~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~t  186 (353)
T 3coi_A          110 FMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVT  186 (353)
T ss_dssp             CCSEEGGGTTTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTCCEEECSTTCTTC--------CCS
T ss_pred             cccCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEeECCCCcEEEeecccccCCCCCccccccC
Confidence             1                       8899999999   999999999999999988  444444433221   2235788


Q ss_pred             cceee---------------------------cCCCCcccccccc-cccccc----------cc-----------cc---
Q 039505          263 AGFLN---------------------------TKNPVISKSIENG-NSHLRD----------KS-----------TV---  290 (342)
Q Consensus       263 ~~y~a---------------------------tG~~P~~~~~~~~-~~~l~~----------~~-----------~~---  290 (342)
                      +.|+|                           ||+.||....... ...+..          ..           .+   
T Consensus       187 ~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (353)
T 3coi_A          187 RWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQT  266 (353)
T ss_dssp             BCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBC
T ss_pred             cCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCC
Confidence            88888                           8888887543211 000000          00           00   


Q ss_pred             -cccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          291 -DLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       291 -d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                       .+.+ ..........+.+++.+|++.+|++|||+.|+++
T Consensus       267 ~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  305 (353)
T 3coi_A          267 PRKDF-TQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  305 (353)
T ss_dssp             SSCCT-TTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             CCccH-HHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence             0001 1112233456889999999999999999999985

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.72  E-value=2.9e-18  Score=156.45  Aligned_cols=169  Identities=18%  Similarity=0.183  Sum_probs=107.2

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc------c--------------EE-EeeCC---cEEE-
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV------P--------------IV-ECHVG---ALIT-  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~------~--------------Lv-~c~~~---~lv~-  211 (342)
                      +.|.  +.||+|+||.||+|+....  .||||++.........      +              ++ ++...   ++++ 
T Consensus        22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  101 (287)
T 2wei_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE  101 (287)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEE
Confidence            4565  8999999999999998744  9999998654322111      1              44 44443   3333 


Q ss_pred             -E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-----CccccCCCCCc-----
Q 039505          212 -I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-----SRISPVEGGTH-----  254 (342)
Q Consensus       212 -m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-----a~~~~~~~~~~-----  254 (342)
                       +                          +++||+|||+   .+|+||||||+||+++.+     .++.+++....     
T Consensus       102 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~  178 (287)
T 2wei_A          102 LYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT  178 (287)
T ss_dssp             CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS
T ss_pred             ccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCC
Confidence             1                          8999999999   899999999999999764     33444332211     


Q ss_pred             cccccccCcceee-------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHH
Q 039505          255 MSTTIAGTAGFLN-------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEI  309 (342)
Q Consensus       255 ~~~~~~Gt~~y~a-------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l  309 (342)
                      ......||+.|+|                         ||+.|+...........+.........  .........+.++
T Consensus       179 ~~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l  256 (287)
T 2wei_A          179 KMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDL--PQWRTISDDAKDL  256 (287)
T ss_dssp             SCSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCS--GGGTTSCHHHHHH
T ss_pred             ccccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCc--hhhhhcCHHHHHH
Confidence            1122357777777                         888888764322100000000000000  0011234458899


Q ss_pred             HHHcccccCCCCCCHHHHHH--HHHhc
Q 039505          310 AMASVSSKVNRRPLMNQVVM--VREQG  334 (342)
Q Consensus       310 ~~~Cl~~~P~~RPsm~eV~~--~L~~i  334 (342)
                      +.+||+.+|++|||+.|+++  .+++.
T Consensus       257 i~~~l~~dp~~Rps~~ell~hp~~~~~  283 (287)
T 2wei_A          257 IRKMLTFHPSLRITATQCLEHPWIQKY  283 (287)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred             HHHHcccChhhCcCHHHHhcCHHHhcc
Confidence            99999999999999999986  34443

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.72  E-value=2.8e-18  Score=162.88  Aligned_cols=166  Identities=20%  Similarity=0.206  Sum_probs=96.8

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc------c--------------EE-EeeC-------C-
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV------P--------------IV-ECHV-------G-  207 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~------~--------------Lv-~c~~-------~-  207 (342)
                      +.|.  +.||+|+||.||+|....+  .||||++.........      +              ++ ++..       . 
T Consensus        29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  108 (367)
T 2fst_X           29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND  108 (367)
T ss_dssp             TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred             CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence            3454  8999999999999998654  9999999754321110      1              22 2221       1 


Q ss_pred             -cEEE--E------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc---c
Q 039505          208 -ALIT--I------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH---M  255 (342)
Q Consensus       208 -~lv~--m------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~---~  255 (342)
                       ++++  +                        +++||+|||+   .+|+||||||+|||++.+.  ++.+++....   .
T Consensus       109 ~~lv~e~~~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~  185 (367)
T 2fst_X          109 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE  185 (367)
T ss_dssp             CEEEEECCCEECC-----CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC----------
T ss_pred             EEEEecccCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHhhEEECCCCCEEEeecccccccccc
Confidence             3333  1                        8999999999   9999999999999999884  4444433221   1


Q ss_pred             ccccccCcceee---------------------------cCCCCcccccccc-cccccc------ccccc----------
Q 039505          256 STTIAGTAGFLN---------------------------TKNPVISKSIENG-NSHLRD------KSTVD----------  291 (342)
Q Consensus       256 ~~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~-~~~l~~------~~~~d----------  291 (342)
                      .....||++|+|                           ||+.||....... ...+..      .+...          
T Consensus       186 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~  265 (367)
T 2fst_X          186 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNY  265 (367)
T ss_dssp             -----CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHH
T ss_pred             CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHH
Confidence            233578999988                           8888887543211 000000      00000          


Q ss_pred             -ccCC--CCCC-----hHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          292 -LSFK--GEFD-----IISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       292 -~~l~--~~~~-----~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                       ..+.  ....     ......+.+++.+||+.||++|||+.|+++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~  311 (367)
T 2fst_X          266 IQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  311 (367)
T ss_dssp             HHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence             0000  0000     112345789999999999999999999985

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.71  E-value=5.8e-18  Score=159.81  Aligned_cols=162  Identities=17%  Similarity=0.206  Sum_probs=102.1

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCC----------------------------CccEE-EeeC---C---
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQG----------------------------HVPIV-ECHV---G---  207 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~----------------------------~~~Lv-~c~~---~---  207 (342)
                      +.||+|+||+||+|+...+  .||||++.......                            ...++ ++..   .   
T Consensus        25 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  104 (373)
T 1q8y_A           25 RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVH  104 (373)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEE
T ss_pred             EeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCce
Confidence            8999999999999998644  99999987432100                            00022 2221   1   


Q ss_pred             -cEEE--E---------------------------ehhhhhhhhccCCC-CeeeCCCCcceEEecCC--------Ccccc
Q 039505          208 -ALIT--I---------------------------PKEGLEYLHQGLKH-PIIQRDMKSTNILLNEK--------SRISP  248 (342)
Q Consensus       208 -~lv~--m---------------------------ia~gL~yLH~~~~~-~IiHrDlKp~NILLd~~--------a~~~~  248 (342)
                       ++++  +                           ++.||+|||+   . +|+||||||+|||++.+        .++.+
T Consensus       105 ~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~D  181 (373)
T 1q8y_A          105 VVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHR---RCGIIHTDIKPENVLMEIVDSPENLIQIKIAD  181 (373)
T ss_dssp             EEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECSCCSGGGEEEEEEETTTTEEEEEECC
T ss_pred             EEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHh---cCCEEecCCChHHeEEeccCCCcCcceEEEcc
Confidence             2332  1                           8899999999   7 99999999999999532        44555


Q ss_pred             CCCCCc---cccccccCcceee--------------------------cCCCCccccccccc-------ccccc------
Q 039505          249 VEGGTH---MSTTIAGTAGFLN--------------------------TKNPVISKSIENGN-------SHLRD------  286 (342)
Q Consensus       249 ~~~~~~---~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~-------~~l~~------  286 (342)
                      ++....   ......||+.|+|                          ||+.||........       ..++.      
T Consensus       182 fg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p  261 (373)
T 1q8y_A          182 LGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELP  261 (373)
T ss_dssp             CTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCC
T ss_pred             cccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCC
Confidence            443321   1233578999998                          99999975432110       00000      


Q ss_pred             ----------------cccccc----c---------CCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          287 ----------------KSTVDL----S---------FKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       287 ----------------~~~~d~----~---------l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                                      ......    .         -....+......+.+++.+||+.||++|||+.|+++
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  333 (373)
T 1q8y_A          262 SYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN  333 (373)
T ss_dssp             HHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred             HHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhh
Confidence                            000000    0         001234566778999999999999999999999986

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.70  E-value=4.7e-18  Score=155.26  Aligned_cols=167  Identities=21%  Similarity=0.240  Sum_probs=98.7

Q ss_pred             hhccC--cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCCC---cc--------------EE-EeeC-----------
Q 039505          160 TNNFE--RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQGH---VP--------------IV-ECHV-----------  206 (342)
Q Consensus       160 t~~f~--~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~~---~~--------------Lv-~c~~-----------  206 (342)
                      .++|.  +.||+|+||.||+|+... + .||||++........   .+              ++ +|..           
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV   84 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred             cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence            45566  899999999999999864 4 999999864211000   00              32 2211           


Q ss_pred             --C---cEEE--E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCC
Q 039505          207 --G---ALIT--I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVE  250 (342)
Q Consensus       207 --~---~lv~--m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~  250 (342)
                        .   ++++  +                           +++||+|||+   .+|+||||||+|||++.+.  ++.+++
T Consensus        85 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dlkp~Nil~~~~~~~kl~dfg  161 (303)
T 1zy4_A           85 KKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFG  161 (303)
T ss_dssp             -CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred             ccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHh---CCeecccCCHHhEEEcCCCCEEEeeCc
Confidence              1   3333  1                           8899999999   8999999999999999883  444433


Q ss_pred             CCCc--------------------cccccccCcceee----cCCCCcccccccc-----cccc-------------cc-c
Q 039505          251 GGTH--------------------MSTTIAGTAGFLN----TKNPVISKSIENG-----NSHL-------------RD-K  287 (342)
Q Consensus       251 ~~~~--------------------~~~~~~Gt~~y~a----tG~~P~~~~~~~~-----~~~l-------------~~-~  287 (342)
                      ....                    ......||+.|+|    .|..++....+-.     ...+             .. .
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~p~~~~~~~~~~~~~~  241 (303)
T 1zy4_A          162 LAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKL  241 (303)
T ss_dssp             CCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHH
T ss_pred             chhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHhccCCchhHHHHHHhc
Confidence            2211                    1123568888988    3332222111100     0000             00 0


Q ss_pred             ccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          288 STVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       288 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ......+....+......+.+++.+||+.+|++|||+.++++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  283 (303)
T 1zy4_A          242 RSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN  283 (303)
T ss_dssp             HSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence            011122223334445566889999999999999999999986

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.70  E-value=4.3e-18  Score=156.93  Aligned_cols=162  Identities=15%  Similarity=0.123  Sum_probs=98.0

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc------------------EE-Eee--------------CC--
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP------------------IV-ECH--------------VG--  207 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~------------------Lv-~c~--------------~~--  207 (342)
                      +.||+|+||.||+|.....  .||||++........+.                  ++ ++.              ..  
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~   96 (320)
T 2i6l_A           17 KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNS   96 (320)
T ss_dssp             EECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCSE
T ss_pred             EEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccccCc
Confidence            8999999999999999864  99999987543211111                  33 331              11  


Q ss_pred             -cEEE--E------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecC-C--CccccCCCCCcc--
Q 039505          208 -ALIT--I------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNE-K--SRISPVEGGTHM--  255 (342)
Q Consensus       208 -~lv~--m------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~-~--a~~~~~~~~~~~--  255 (342)
                       ++|+  +                        +++||+|||+   .+|+||||||+|||++. +  .++.+++.....  
T Consensus        97 ~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~  173 (320)
T 2i6l_A           97 VYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDP  173 (320)
T ss_dssp             EEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC--
T ss_pred             eeEEeeccCCCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCeEEEccCccccccCC
Confidence             3443  1                        8999999999   99999999999999974 3  445554433211  


Q ss_pred             -------ccccccCcceee---------------------------cCCCCcccccccc-cccccc----------ccc-
Q 039505          256 -------STTIAGTAGFLN---------------------------TKNPVISKSIENG-NSHLRD----------KST-  289 (342)
Q Consensus       256 -------~~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~-~~~l~~----------~~~-  289 (342)
                             .....||..|+|                           ||+.||....... ...+..          .++ 
T Consensus       174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (320)
T 2i6l_A          174 HYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELL  253 (320)
T ss_dssp             ------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHH
T ss_pred             CcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhh
Confidence                   122456777887                           8999987654221 000000          000 


Q ss_pred             ------ccccCC-CC-----CChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          290 ------VDLSFK-GE-----FDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       290 ------~d~~l~-~~-----~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                            +..... ..     ........+.+++.+||+.+|++|||+.|+++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (320)
T 2i6l_A          254 SVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS  305 (320)
T ss_dssp             TTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             hcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence                  000000 00     01123456889999999999999999999985

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.69  E-value=1.6e-17  Score=152.63  Aligned_cols=159  Identities=16%  Similarity=0.123  Sum_probs=95.6

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc---------------EE-EeeC----C---cEEE--E-----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP---------------IV-ECHV----G---ALIT--I-----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~---------------Lv-~c~~----~---~lv~--m-----  212 (342)
                      ++||+|+||.||+|....+  .||||+++.... ...+               ++ ++..    .   ++|+  +     
T Consensus        24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L  102 (299)
T 3m2w_A           24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK-ARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGEL  102 (299)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECSHH-HHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBH
T ss_pred             cccccCCCeEEEEEEEcCCCcEEEEEEecccHH-HHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCCCcH
Confidence            6799999999999998654  999999864311 0011               33 3322    2   3333  1     


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecC---C--CccccCCCCCccccc------
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNE---K--SRISPVEGGTHMSTT------  258 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~---~--a~~~~~~~~~~~~~~------  258 (342)
                                             ++.||+|||+   .+|+||||||+|||++.   +  .++.+++........      
T Consensus       103 ~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~  179 (299)
T 3m2w_A          103 FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGEKYDKSC  179 (299)
T ss_dssp             HHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECTTCGGGGHH
T ss_pred             HHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEecCCCCCcEEEeccccccccccccCCchh
Confidence                                   8899999999   99999999999999997   4  344444332211110      


Q ss_pred             cccCcc----eeecCCCCcccccccccccccccccccccCCCCCC----hHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          259 IAGTAG----FLNTKNPVISKSIENGNSHLRDKSTVDLSFKGEFD----IISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       259 ~~Gt~~----y~atG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~----~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ..-+.|    .+.||+.||..........-....+.....  ..+    ......+.+++.+||+.+|++|||+.|+++
T Consensus       180 DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~  256 (299)
T 3m2w_A          180 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY--EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  256 (299)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCC--SSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccc--cCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            111111    112999999765432100000000111000  111    123456889999999999999999999985

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.69  E-value=2.4e-17  Score=168.57  Aligned_cols=158  Identities=16%  Similarity=0.183  Sum_probs=105.1

Q ss_pred             hccC--cccCcCCCeeEEEEEEC--CC-eEEEEEccCCCCCCCc-----c--------------EE-EeeCC--------
Q 039505          161 NNFE--RVPYKGGFITVYHGQLV--KS-EVAMKMLSPSSSQGHV-----P--------------IV-ECHVG--------  207 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~--~~-~vAVK~l~~~~~~~~~-----~--------------Lv-~c~~~--------  207 (342)
                      +.|.  +.||+|+||+||+|.+.  ++ .||||++.........     +              ++ +|...        
T Consensus        80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~  159 (681)
T 2pzi_A           80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG  159 (681)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence            4455  89999999999999986  35 8999998654321111     0              44 44322        


Q ss_pred             cEEE--E------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-CccccCCCCCcc--ccc
Q 039505          208 ALIT--I------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-SRISPVEGGTHM--STT  258 (342)
Q Consensus       208 ~lv~--m------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-a~~~~~~~~~~~--~~~  258 (342)
                      ++|+  +                        +++||+|||+   .+|+||||||+|||++++ .++.+++.....  ...
T Consensus       160 ~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~giiHrDlkp~NIll~~~~~kl~DFG~a~~~~~~~~  236 (681)
T 2pzi_A          160 YIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHS---IGLVYNDLKPENIMLTEEQLKLIDLGAVSRINSFGY  236 (681)
T ss_dssp             EEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSSCEEECCCTTCEETTCCSC
T ss_pred             EEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH---CCCeecccChHHeEEeCCcEEEEecccchhcccCCc
Confidence            3333  1                        8999999999   999999999999999987 555555443221  234


Q ss_pred             cccCcceee-------------------------cCCCCcccccccccccccccccccccCCCC-CChHHHHHHHHHHHH
Q 039505          259 IAGTAGFLN-------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGE-FDIISVGKAVEIAMA  312 (342)
Q Consensus       259 ~~Gt~~y~a-------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~-~~~~~~~~l~~l~~~  312 (342)
                      ..||++|+|                         +|.+|+......             .+... ........+.+++.+
T Consensus       237 ~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~-------------~~~~~~~~~~~~~~l~~li~~  303 (681)
T 2pzi_A          237 LYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVD-------------GLPEDDPVLKTYDSYGRLLRR  303 (681)
T ss_dssp             CCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETTEECS-------------SCCTTCHHHHHCHHHHHHHHH
T ss_pred             cCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCcccccc-------------cccccccccccCHHHHHHHhh
Confidence            679999998                         554444321111             01111 111223568899999


Q ss_pred             cccccCCCCCC-HHHHHHHHHhc
Q 039505          313 SVSSKVNRRPL-MNQVVMVREQG  334 (342)
Q Consensus       313 Cl~~~P~~RPs-m~eV~~~L~~i  334 (342)
                      ||+.+|++||+ +.++.+.|..+
T Consensus       304 ~l~~dP~~R~~~~~~l~~~l~~~  326 (681)
T 2pzi_A          304 AIDPDPRQRFTTAEEMSAQLTGV  326 (681)
T ss_dssp             HTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             hccCChhhCCCHHHHHHHHHHHH
Confidence            99999999995 66666666554

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.67  E-value=5.9e-17  Score=151.56  Aligned_cols=112  Identities=15%  Similarity=0.165  Sum_probs=72.3

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc----cccccccCcceee-------------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH----MSTTIAGTAGFLN-------------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~----~~~~~~Gt~~y~a-------------------  267 (342)
                      +++||+|||+.  .+|+||||||+|||++.+.  ++.+++....    ......||+.|+|                   
T Consensus       160 i~~~l~~lH~~--~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~s  237 (348)
T 2pml_X          160 VLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWS  237 (348)
T ss_dssp             HHHHHHHHHHT--SCEECCCCCGGGEEECTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHH
T ss_pred             HHHHHHHHhcc--CCEeecCCChHhEEEcCCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHH
Confidence            88999999972  7899999999999999884  4444333221    1233567888877                   


Q ss_pred             ---------cCCCCcccccccccccccccccccc--cCCC---------------CCChHHHHHHHHHHHHcccccCCCC
Q 039505          268 ---------TKNPVISKSIENGNSHLRDKSTVDL--SFKG---------------EFDIISVGKAVEIAMASVSSKVNRR  321 (342)
Q Consensus       268 ---------tG~~P~~~~~~~~~~~l~~~~~~d~--~l~~---------------~~~~~~~~~l~~l~~~Cl~~~P~~R  321 (342)
                               ||+.|+.......  .+.. .+...  ....               .........+.+++.+||+.+|++|
T Consensus       238 lG~il~~l~~g~~pf~~~~~~~--~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R  314 (348)
T 2pml_X          238 LGICLYVMFYNVVPFSLKISLV--ELFN-NIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAER  314 (348)
T ss_dssp             HHHHHHHHHHSSCSSCCSSCSH--HHHH-HHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGS
T ss_pred             HHHHHHHHHhCCCCCCCCCcHH--HHHH-HHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhC
Confidence                     7888887543311  1111 00000  0000               0012234568899999999999999


Q ss_pred             CCHHHHHH
Q 039505          322 PLMNQVVM  329 (342)
Q Consensus       322 Psm~eV~~  329 (342)
                      ||+.|+++
T Consensus       315 ps~~e~l~  322 (348)
T 2pml_X          315 ITSEDALK  322 (348)
T ss_dssp             CCHHHHHT
T ss_pred             CCHHHHhc
Confidence            99999986

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.64  E-value=6.7e-17  Score=163.72  Aligned_cols=172  Identities=20%  Similarity=0.151  Sum_probs=105.2

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc-------------------EE-EeeC------C---
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP-------------------IV-ECHV------G---  207 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~-------------------Lv-~c~~------~---  207 (342)
                      ++|.  +.||+|+||+||+|....+  .||||++.........+                   ++ ++..      +   
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~   93 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP   93 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence            4455  8999999999999998654  99999987542211110                   22 2211      1   


Q ss_pred             cEEE--E-----------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-----CccccCCC
Q 039505          208 ALIT--I-----------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-----SRISPVEG  251 (342)
Q Consensus       208 ~lv~--m-----------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-----a~~~~~~~  251 (342)
                      ++|+  +                             +++||+|||+   .+|+||||||+|||++.+     .++.+++.
T Consensus        94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs---~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~  170 (676)
T 3qa8_A           94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGY  170 (676)
T ss_dssp             CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHH---TTBCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred             EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEeecCCCceeEEEccccc
Confidence            3333  1                             8899999999   999999999999999976     23455443


Q ss_pred             CCc-----cccccccCcceee--------------------------cCCCCcccccccc----------ccccccccc-
Q 039505          252 GTH-----MSTTIAGTAGFLN--------------------------TKNPVISKSIENG----------NSHLRDKST-  289 (342)
Q Consensus       252 ~~~-----~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~----------~~~l~~~~~-  289 (342)
                      ...     ......||++|+|                          ||+.||.......          ...+...+. 
T Consensus       171 a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l  250 (676)
T 3qa8_A          171 AKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDL  250 (676)
T ss_dssp             CCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCC
T ss_pred             ccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhh
Confidence            322     1233578889988                          9999986532110          000000000 


Q ss_pred             -----cccc--CCCCCChHHHHHHHHHHHHcccccCCCCCCHHH-----HHHHHHhcc
Q 039505          290 -----VDLS--FKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQ-----VVMVREQGN  335 (342)
Q Consensus       290 -----~d~~--l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~e-----V~~~L~~i~  335 (342)
                           ....  ............+.+++..||+.||++|||+.|     ..+.++.+.
T Consensus       251 ~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL  308 (676)
T 3qa8_A          251 TGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSIL  308 (676)
T ss_dssp             SSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHH
T ss_pred             ccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHH
Confidence                 0001  112234456778999999999999999999987     345555443

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.60  E-value=2e-16  Score=147.72  Aligned_cols=52  Identities=15%  Similarity=0.139  Sum_probs=40.0

Q ss_pred             ehhhhhhhh-ccCCCCeeeCCCCcceEEecCCC--------------------ccccCCCCCcc---ccccccCcceee
Q 039505          213 PKEGLEYLH-QGLKHPIIQRDMKSTNILLNEKS--------------------RISPVEGGTHM---STTIAGTAGFLN  267 (342)
Q Consensus       213 ia~gL~yLH-~~~~~~IiHrDlKp~NILLd~~a--------------------~~~~~~~~~~~---~~~~~Gt~~y~a  267 (342)
                      +++||+||| +   .+|+||||||+|||++.+.                    .+...+++...   .....||+.|+|
T Consensus       170 i~~aL~~lH~~---~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt~~y~a  245 (336)
T 2vuw_A          170 LTASLAVAEAS---LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMD  245 (336)
T ss_dssp             HHHHHHHHHHH---HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEECCCCTTC
T ss_pred             HHHHHHHHHHh---CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEEeecccC
Confidence            899999999 8   8999999999999999763                    34433444322   123689999998

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.23  E-value=7.7e-12  Score=125.19  Aligned_cols=107  Identities=12%  Similarity=0.161  Sum_probs=63.0

Q ss_pred             cccCcCCCeeEEEEEEC-CC-eEEEEEccCCCCCCCcc-----------------------------EE-EeeCC---cE
Q 039505          165 RVPYKGGFITVYHGQLV-KS-EVAMKMLSPSSSQGHVP-----------------------------IV-ECHVG---AL  209 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~-~~-~vAVK~l~~~~~~~~~~-----------------------------Lv-~c~~~---~l  209 (342)
                      ...+.|++|.+.+++.. -+ .+|||++..........                             ++ +..++   +|
T Consensus       240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yL  319 (569)
T 4azs_A          240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWL  319 (569)
T ss_dssp             CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEE
T ss_pred             hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEE
Confidence            55677777776665432 23 89999997653222110                             55 55555   66


Q ss_pred             EE-E------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc------cc
Q 039505          210 IT-I------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH------MS  256 (342)
Q Consensus       210 v~-m------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~------~~  256 (342)
                      |+ +                        |++||+|+|+   .+||||||||+||||+++.  |+.+++....      ..
T Consensus       320 VMEyv~G~~L~d~i~~~~~l~~~~I~~QIl~AL~ylH~---~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~~  396 (569)
T 4azs_A          320 VMEKLPGRLLSDMLAAGEEIDREKILGSLLRSLAALEK---QGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWP  396 (569)
T ss_dssp             EEECCCSEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHH---TTCEESCCCGGGEEECTTSCEEECCCTTEESCC---CCS
T ss_pred             EEecCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHH---CCceeccCchHhEEECCCCCEEEeecccCeeCCCCCccc
Confidence            66 2                        8999999999   9999999999999999984  5555543211      22


Q ss_pred             cccccCcceee----cCCCCcc
Q 039505          257 TTIAGTAGFLN----TKNPVIS  274 (342)
Q Consensus       257 ~~~~Gt~~y~a----tG~~P~~  274 (342)
                      ...+||++|||    +|+.++.
T Consensus       397 ~t~vGTp~YmAPE~l~g~~~~~  418 (569)
T 4azs_A          397 TNLVQSFFVFVNELFAENKSWN  418 (569)
T ss_dssp             HHHHHHHHHHHHHHC-------
T ss_pred             cCceechhhccHHHhCCCCCCc
Confidence            34789999999    7765543

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.22  E-value=5.7e-12  Score=125.37  Aligned_cols=85  Identities=15%  Similarity=0.128  Sum_probs=55.2

Q ss_pred             cccCcCCCeeEEEEEECCCeEEEEEccCCCCCCC------------cc------------E--E-EeeCC---cEEE--E
Q 039505          165 RVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGH------------VP------------I--V-ECHVG---ALIT--I  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~~vAVK~l~~~~~~~~------------~~------------L--v-~c~~~---~lv~--m  212 (342)
                      ++||+|+||+||+|.+.+..+|+|+.........            +|            +  . ++...   ++|+  +
T Consensus       342 ~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~~  421 (540)
T 3en9_A          342 HLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSYI  421 (540)
T ss_dssp             ------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEECC
T ss_pred             CEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEECC
Confidence            6899999999999976655899998655322110            11            2  2 33222   4444  2


Q ss_pred             ------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCccccCCCC
Q 039505          213 ------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGG  252 (342)
Q Consensus       213 ------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~~~~~~~~  252 (342)
                                        +++||+|||+   .+|+||||||+|||+++..++.+++..
T Consensus       422 ~ggsL~~~l~~~~~i~~qi~~aL~~LH~---~gIiHrDiKp~NILl~~~~kL~DFGla  476 (540)
T 3en9_A          422 NGKLAKDVIEDNLDIAYKIGEIVGKLHK---NDVIHNDLTTSNFIFDKDLYIIDFGLG  476 (540)
T ss_dssp             CSEEHHHHSTTCTHHHHHHHHHHHHHHH---TTEECTTCCTTSEEESSSEEECCCTTC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHH---CcCccCCCCHHHEEECCeEEEEECccC
Confidence                              8899999999   999999999999999995555555443

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.18  E-value=1.7e-11  Score=111.97  Aligned_cols=82  Identities=16%  Similarity=0.151  Sum_probs=57.5

Q ss_pred             cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCC---------------------------------ccEE-EeeCC--
Q 039505          165 RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGH---------------------------------VPIV-ECHVG--  207 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~---------------------------------~~Lv-~c~~~--  207 (342)
                      +.||+|+||.||+|.+.++ .||||+++.......                                 ..+. ++..+  
T Consensus        96 ~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~~~v~~~~~~~~~  175 (282)
T 1zar_A           96 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWEGN  175 (282)
T ss_dssp             EEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEETT
T ss_pred             CEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccCCCcCeEEeccce
Confidence            8999999999999999656 999999964321100                                 0011 22111  


Q ss_pred             cEEE--E-------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCC
Q 039505          208 ALIT--I-------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVE  250 (342)
Q Consensus       208 ~lv~--m-------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~  250 (342)
                      ++|+  +                   +++||.|||+   .+|+||||||+|||++ +  .++.+++
T Consensus       176 ~lvmE~~~g~~L~~l~~~~~~~i~~qi~~~l~~lH~---~giiHrDlkp~NILl~-~~~vkl~DFG  237 (282)
T 1zar_A          176 AVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYH---RGIVHGDLSQYNVLVS-EEGIWIIDFP  237 (282)
T ss_dssp             EEEEECCCCEEGGGCCCSCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEE-TTEEEECCCT
T ss_pred             EEEEEecCCCcHHHcchhhHHHHHHHHHHHHHHHHH---CCCEeCCCCHHHEEEE-CCcEEEEECC
Confidence            3333  1                   8999999999   9999999999999999 6  4444443

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.05  E-value=1.2e-10  Score=110.56  Aligned_cols=76  Identities=14%  Similarity=0.112  Sum_probs=56.1

Q ss_pred             cccCcCCCeeEEEEEECCC-eEEEEEccCCCCC-----CCc---------------------c---E-------------
Q 039505          165 RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQ-----GHV---------------------P---I-------------  201 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~-----~~~---------------------~---L-------------  201 (342)
                      +.||+|+||.||+|...++ .||||+++.....     ...                     +   |             
T Consensus       101 ~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp~p  180 (397)
T 4gyi_A          101 SRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVPEP  180 (397)
T ss_dssp             EEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCE
T ss_pred             CEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCCee
Confidence            7899999999999999888 9999998643211     000                     0   0             


Q ss_pred             EEeeCCcEEE--E--------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC
Q 039505          202 VECHVGALIT--I--------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK  243 (342)
Q Consensus       202 v~c~~~~lv~--m--------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~  243 (342)
                      +.+....+|+  +                    ++.+|.|||+   .+||||||||.|||++++
T Consensus       181 ~~~~~~~LVME~i~G~~L~~l~~~~~~~~l~~qll~~l~~lH~---~gIVHrDLKp~NILl~~d  241 (397)
T 4gyi_A          181 IAQSRHTIVMSLVDALPMRQVSSVPDPASLYADLIALILRLAK---HGLIHGDFNEFNILIREE  241 (397)
T ss_dssp             EEEETTEEEEECCSCEEGGGCCCCSCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEEEE
T ss_pred             eeccCceEEEEecCCccHhhhcccHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeCC
Confidence            0111113343  1                    8899999999   899999999999999987

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.02  E-value=4.2e-10  Score=101.16  Aligned_cols=35  Identities=17%  Similarity=0.342  Sum_probs=29.2

Q ss_pred             ehhhhhhhh-ccCCCCeeeCCCCcceEEecCCCccccCCCC
Q 039505          213 PKEGLEYLH-QGLKHPIIQRDMKSTNILLNEKSRISPVEGG  252 (342)
Q Consensus       213 ia~gL~yLH-~~~~~~IiHrDlKp~NILLd~~a~~~~~~~~  252 (342)
                      +++||.||| +   .+|+||||||+|||+++  ++...+++
T Consensus       179 i~~~l~~lH~~---~givHrDlkp~NILl~~--~~~liDFG  214 (258)
T 1zth_A          179 VVENVKRLYQE---AELVHADLSEYNIMYID--KVYFIDMG  214 (258)
T ss_dssp             HHHHHHHHHHT---SCEECSSCSTTSEEESS--SEEECCCT
T ss_pred             HHHHHHHHHHH---CCEEeCCCCHHHEEEcC--cEEEEECc
Confidence            889999999 8   89999999999999988  44433444

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=97.32  E-value=0.00061  Score=60.20  Aligned_cols=34  Identities=12%  Similarity=0.080  Sum_probs=25.8

Q ss_pred             HhhccC--cccCcCCCeeEEEEEECCCeEEEEEccC
Q 039505          159 VTNNFE--RVPYKGGFITVYHGQLVKSEVAMKMLSP  192 (342)
Q Consensus       159 at~~f~--~~lG~G~fG~Vykg~~~~~~vAVK~l~~  192 (342)
                      ..+++.  ..++.|+.+.||+....++.+++|+...
T Consensus        12 ~l~~~~~~~~~~g~s~~~v~~~~~~~~~~vlK~~~~   47 (263)
T 3tm0_A           12 LIEKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDS   47 (263)
T ss_dssp             HHTTSEEEECCSCCSSSEEEEEECSSCEEEEEEECG
T ss_pred             HhccceeEeeccCCCCCeEEEEECCCCcEEEEeCCc
Confidence            344554  6778888899999986655999999864

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=96.93  E-value=0.0022  Score=56.04  Aligned_cols=29  Identities=7%  Similarity=-0.160  Sum_probs=21.6

Q ss_pred             cccC-cCCCeeEEEEEECCC-eEEEEEccCC
Q 039505          165 RVPY-KGGFITVYHGQLVKS-EVAMKMLSPS  193 (342)
Q Consensus       165 ~~lG-~G~fG~Vykg~~~~~-~vAVK~l~~~  193 (342)
                      ..++ .|..+.||+....++ .++||+....
T Consensus        25 ~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~   55 (264)
T 1nd4_A           25 AQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG   55 (264)
T ss_dssp             EECSCTTSSCEEEEEECTTSCCEEEEEECSC
T ss_pred             EecccCCCCceEEEEecCCCCeEEEEeCCcc
Confidence            3344 566699999987766 8999997654

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=96.36  E-value=0.0059  Score=56.55  Aligned_cols=27  Identities=7%  Similarity=-0.104  Sum_probs=22.3

Q ss_pred             cccCcCCCeeEEEEEECCCeEEEEEcc
Q 039505          165 RVPYKGGFITVYHGQLVKSEVAMKMLS  191 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~~vAVK~l~  191 (342)
                      +.++.|.++.||+....++.+++|+..
T Consensus        44 ~~l~~G~sn~~y~v~~~~~~~vlr~~~   70 (359)
T 3dxp_A           44 EQFKGGQSNPTFKLVTPGQTYVMRAKP   70 (359)
T ss_dssp             EECCC-CCSCEEEEECSSCEEEEECCC
T ss_pred             EEcCCcccceEEEEEECCceEEEEeCC
Confidence            678999999999998876688889876

>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*

Probab=95.82  E-value=0.0026  Score=65.45  Aligned_cols=48  Identities=25%  Similarity=0.351  Sum_probs=29.9

Q ss_pred             EEeeeccCcCCCCCCCCCC-----------------CcchhhhcccchhhHhhhCCCccccCCCCcc
Q 039505           94 RTTFIHGNYDEQNILPDFK-----------------PVPKFLSQLSSLKFLKRNLGRNKLTGPLPVE  143 (342)
Q Consensus        94 r~~fl~gN~~~~~~pp~f~-----------------~ip~~l~~l~~L~~l~~~ls~N~l~g~ip~~  143 (342)
                      +...+.+|.++|.+|..|.                 .||..++.+++|+.+  ++|+|+++|+||..
T Consensus       659 ~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L--~ls~N~l~g~iP~~  723 (768)
T 3rgz_A          659 FILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEI--DLSNNNLSGPIPEM  723 (768)
T ss_dssp             CEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEE--ECCSSEEEEECCSS
T ss_pred             CEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEE--ECcCCcccccCCCc
Confidence            4566666666666665543                 456666666666666  66666666666643

>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*

Probab=94.98  E-value=0.013  Score=60.23  Aligned_cols=52  Identities=23%  Similarity=0.325  Sum_probs=42.6

Q ss_pred             eEEeeeccCcCCCCCCCCCC-----------------CcchhhhcccchhhHhhhCCCccccCCCCccccc
Q 039505           93 IRTTFIHGNYDEQNILPDFK-----------------PVPKFLSQLSSLKFLKRNLGRNKLTGPLPVELIG  146 (342)
Q Consensus        93 lr~~fl~gN~~~~~~pp~f~-----------------~ip~~l~~l~~L~~l~~~ls~N~l~g~ip~~~~~  146 (342)
                      ++...+.+|.++|.+|..|+                 .||+.++++++|+.|  ++|+|+++|.+|..+..
T Consensus       634 L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~L--dLs~N~l~g~ip~~l~~  702 (768)
T 3rgz_A          634 MMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNIL--DLSSNKLDGRIPQAMSA  702 (768)
T ss_dssp             CCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEE--ECCSSCCEECCCGGGGG
T ss_pred             ccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEE--ECCCCcccCcCChHHhC
Confidence            45788999999998887653                 678888888888888  89999999888876554

>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}

Probab=94.50  E-value=0.03  Score=51.19  Aligned_cols=53  Identities=21%  Similarity=0.214  Sum_probs=40.1

Q ss_pred             eEEeeeccCcCCCCCCCCCC-----------------CcchhhhcccchhhHhhhCCCccccCCCCcccccc
Q 039505           93 IRTTFIHGNYDEQNILPDFK-----------------PVPKFLSQLSSLKFLKRNLGRNKLTGPLPVELIGK  147 (342)
Q Consensus        93 lr~~fl~gN~~~~~~pp~f~-----------------~ip~~l~~l~~L~~l~~~ls~N~l~g~ip~~~~~~  147 (342)
                      ++.+.+.+|.+.+.+|..|.                 .+|.+++.+++|+.+  ++++|++.+.+|..+...
T Consensus       231 L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L--~L~~n~~~~~iP~~l~~L  300 (328)
T 4fcg_A          231 LEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKL--DLRGCVNLSRLPSLIAQL  300 (328)
T ss_dssp             CCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEE--ECTTCTTCCCCCGGGGGS
T ss_pred             CCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEE--eCCCCCchhhccHHHhhc
Confidence            56677778887777776553                 467788888888888  888888888888776543

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=92.99  E-value=0.21  Score=44.36  Aligned_cols=29  Identities=14%  Similarity=0.092  Sum_probs=25.3

Q ss_pred             cccCcCCCeeEEEEEECCC-eEEEEEccCC
Q 039505          165 RVPYKGGFITVYHGQLVKS-EVAMKMLSPS  193 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~  193 (342)
                      ..+|.|..+.||+.++.++ .|.||+-...
T Consensus        21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~   50 (288)
T 3f7w_A           21 AERGHSHRWHLYRVELADGTPLFVKALPDD   50 (288)
T ss_dssp             EEEEEETTEEEEEEEETTSCEEEEEECCTT
T ss_pred             EecCCCCCeEEEEEEECCCCEEEEEEeCCC
Confidence            6789999999999999988 9999986544

>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}

Probab=92.03  E-value=0.036  Score=56.64  Aligned_cols=28  Identities=25%  Similarity=0.369  Sum_probs=18.3

Q ss_pred             CcchhhhcccchhhHhhhCCCccccCCCCc
Q 039505          113 PVPKFLSQLSSLKFLKRNLGRNKLTGPLPV  142 (342)
Q Consensus       113 ~ip~~l~~l~~L~~l~~~ls~N~l~g~ip~  142 (342)
                      .||..++.|++|+.|  ++++|+|+|.+|.
T Consensus       307 ~lp~~~~~l~~L~~L--~L~~N~l~~~~p~  334 (727)
T 4b8c_D          307 TLPWEFGNLCNLQFL--GVEGNPLEKQFLK  334 (727)
T ss_dssp             CCCSSTTSCTTCCCE--ECTTSCCCSHHHH
T ss_pred             ccChhhhcCCCccEE--eCCCCccCCCChH
Confidence            456667777777777  6666666665554

>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}

Probab=91.90  E-value=0.072  Score=48.64  Aligned_cols=65  Identities=17%  Similarity=0.190  Sum_probs=34.2

Q ss_pred             ccccccccCCCCcCccccccccCCcceeEEeeeccCcCCCCCCCCCC----------------CcchhhhcccchhhHhh
Q 039505           66 QVWSLRSFPDGIRNCYRFNLTRDSKYLIRTTFIHGNYDEQNILPDFK----------------PVPKFLSQLSSLKFLKR  129 (342)
Q Consensus        66 ~~~~~r~fp~~~~~C~~l~~~~~~~~llr~~fl~gN~~~~~~pp~f~----------------~ip~~l~~l~~L~~l~~  129 (342)
                      +...+..+|+++.++..|.          .+.+.+|.+. .+|..|.                .+|..++.+++|+.+  
T Consensus        89 ~~n~l~~lp~~l~~l~~L~----------~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~~lp~~l~~l~~L~~L--  155 (328)
T 4fcg_A           89 RSVPLPQFPDQAFRLSHLQ----------HMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLRALPASIASLNRLREL--  155 (328)
T ss_dssp             ESSCCSSCCSCGGGGTTCS----------EEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCCCCCGGGGGCTTCCEE--
T ss_pred             cCCCchhcChhhhhCCCCC----------EEECCCCCcc-chhHHHhccCCCCEEECCCCccccCcHHHhcCcCCCEE--
Confidence            3445566777776665554          5556666554 3332221                345555555555555  


Q ss_pred             hCCCccccCCCCcc
Q 039505          130 NLGRNKLTGPLPVE  143 (342)
Q Consensus       130 ~ls~N~l~g~ip~~  143 (342)
                      ++++|++.+.+|..
T Consensus       156 ~L~~n~~~~~~p~~  169 (328)
T 4fcg_A          156 SIRACPELTELPEP  169 (328)
T ss_dssp             EEEEETTCCCCCSC
T ss_pred             ECCCCCCccccChh
Confidence            55555555555543

>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A*

Probab=91.25  E-value=0.12  Score=42.93  Aligned_cols=74  Identities=16%  Similarity=0.181  Sum_probs=49.4

Q ss_pred             cCCCCC-cccCCcceEEecCcchhccCccc----ccchhhcc-hhhhccccccccCCCCcCccccccccCCcceeEEeee
Q 039505           25 HEAGSS-YTEASTKLKYISDTNYIETGLAK----SILLQHRR-AKQQQVWSLRSFPDGIRNCYRFNLTRDSKYLIRTTFI   98 (342)
Q Consensus        25 ~~~~~~-~~~~~~~~~~~~d~~~~~~g~~~----~~~~~~~~-~~~~~~~~~r~fp~~~~~C~~l~~~~~~~~llr~~fl   98 (342)
                      +.||++ .+| ..+..|.+|..|...|...    .+...... ....-|.|-|.+|.  .-+|.++...+..|+||-.|.
T Consensus        10 INcGg~~~~d-~~gr~w~~D~~~~~~g~~~~~~~~~~~~~~~~~~~~lY~TaR~~~~--~~tY~f~v~~~G~Y~VrLhF~   86 (174)
T 2jwp_A           10 VNAGGESHVD-VHGIHYRKDPLEGRVGRASDYGMKLPILRSNPEDQVLYQTERYNED--SFGYDIPIKEEGEYVLVLKFA   86 (174)
T ss_dssp             EEETSSSEEE-TTTEEECSSCSSTTCCCCCCCCTTSCCSSSCHHHHHTTTCCCCCCS--CEEEEEECCSCEEEEEEEEEE
T ss_pred             EECCCCCccC-CCCCEEcCCcCcccCCcccccccceEecccCCCCchhhhhhccCCC--CeEEEEEeCCCeEEEEEEEEe
Confidence            567755 455 4788999999886444221    11111111 34558899999986  458999987777999999996


Q ss_pred             ccC
Q 039505           99 HGN  101 (342)
Q Consensus        99 ~gN  101 (342)
                      .-.
T Consensus        87 ei~   89 (174)
T 2jwp_A           87 EVY   89 (174)
T ss_dssp             CCS
T ss_pred             ccc
Confidence            544

>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}

Probab=90.64  E-value=0.11  Score=54.17  Aligned_cols=65  Identities=18%  Similarity=0.154  Sum_probs=42.1

Q ss_pred             cccccCCCCcCccccccccCCcceeEEeeeccCcCCC-CCCCCCCC---------cchhhh--cccchhhHhhhCCCccc
Q 039505           69 SLRSFPDGIRNCYRFNLTRDSKYLIRTTFIHGNYDEQ-NILPDFKP---------VPKFLS--QLSSLKFLKRNLGRNKL  136 (342)
Q Consensus        69 ~~r~fp~~~~~C~~l~~~~~~~~llr~~fl~gN~~~~-~~pp~f~~---------ip~~l~--~l~~L~~l~~~ls~N~l  136 (342)
                      .+..+|++++++-+|          +.+.+.+|.+++ .+|..+.+         ||+.++  ++++|+.|  ++++|++
T Consensus       436 ~L~~IP~~l~~L~~L----------~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L--~Ls~N~l  503 (876)
T 4ecn_A          436 RITFISKAIQRLTKL----------QIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDV--ELYNCPN  503 (876)
T ss_dssp             EEEEECGGGGGCTTC----------CEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEE--EEESCTT
T ss_pred             cccchhHHHhcCCCC----------CEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEE--ECcCCCC
Confidence            344467777666555          477888888887 33333332         666666  77777777  7777777


Q ss_pred             cCCCCcccc
Q 039505          137 TGPLPVELI  145 (342)
Q Consensus       137 ~g~ip~~~~  145 (342)
                      .|.+|..+.
T Consensus       504 ~~~iP~~l~  512 (876)
T 4ecn_A          504 MTQLPDFLY  512 (876)
T ss_dssp             CCSCCGGGG
T ss_pred             CccChHHHh
Confidence            777775543

>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7

Probab=89.08  E-value=0.19  Score=45.84  Aligned_cols=39  Identities=23%  Similarity=0.034  Sum_probs=26.4

Q ss_pred             EEeeeccCcCCCCCCCCCCCcchhhhcccchhhHhhhCCCccccCCCC
Q 039505           94 RTTFIHGNYDEQNILPDFKPVPKFLSQLSSLKFLKRNLGRNKLTGPLP  141 (342)
Q Consensus        94 r~~fl~gN~~~~~~pp~f~~ip~~l~~l~~L~~l~~~ls~N~l~g~ip  141 (342)
                      +.+.+.+|.+++       ..|..+++|++|+.|  ++++|+|++-.|
T Consensus        59 ~~L~l~~N~l~~-------~~~~~~~~l~~L~~L--~l~~N~l~~~~~   97 (347)
T 2ifg_A           59 RNLTIVKSGLRF-------VAPDAFHFTPRLSRL--NLSFNALESLSW   97 (347)
T ss_dssp             SEEECCSSCCCE-------ECTTGGGSCSCCCEE--ECCSSCCSCCCS
T ss_pred             CEEECCCCccce-------eCHHHhcCCcCCCEE--eCCCCccceeCH
Confidence            345555555543       224467789999999  999999986443

>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8

Probab=89.02  E-value=0.097  Score=47.32  Aligned_cols=29  Identities=41%  Similarity=0.768  Sum_probs=15.9

Q ss_pred             cchhhhcccchhhHhhhCCCccccCCCCccc
Q 039505          114 VPKFLSQLSSLKFLKRNLGRNKLTGPLPVEL  144 (342)
Q Consensus       114 ip~~l~~l~~L~~l~~~ls~N~l~g~ip~~~  144 (342)
                      +|..++.+++|+.+  ++++|++++.+|..+
T Consensus       117 ~p~~~~~l~~L~~L--~Ls~N~l~~~~p~~~  145 (313)
T 1ogq_A          117 IPDFLSQIKTLVTL--DFSYNALSGTLPPSI  145 (313)
T ss_dssp             CCGGGGGCTTCCEE--ECCSSEEESCCCGGG
T ss_pred             CCHHHhCCCCCCEE--eCCCCccCCcCChHH
Confidence            34455555555555  555555555555443

>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8

Probab=88.34  E-value=0.17  Score=45.71  Aligned_cols=52  Identities=17%  Similarity=0.262  Sum_probs=34.0

Q ss_pred             eEEeeeccCcCCCCCCCCCC-----------------CcchhhhcccchhhHhhhCCCccccCCCCccccc
Q 039505           93 IRTTFIHGNYDEQNILPDFK-----------------PVPKFLSQLSSLKFLKRNLGRNKLTGPLPVELIG  146 (342)
Q Consensus        93 lr~~fl~gN~~~~~~pp~f~-----------------~ip~~l~~l~~L~~l~~~ls~N~l~g~ip~~~~~  146 (342)
                      ++...+.+|.+.+.+|..|.                 .+|..++.+++|+.+  ++++|+++|.+|..+..
T Consensus       103 L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L--~L~~N~l~~~~p~~l~~  171 (313)
T 1ogq_A          103 LHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGI--TFDGNRISGAIPDSYGS  171 (313)
T ss_dssp             CSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEE--ECCSSCCEEECCGGGGC
T ss_pred             CCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeE--ECcCCcccCcCCHHHhh
Confidence            34555566666555554432                 457777778888888  88888888777765543

>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7

Probab=87.80  E-value=0.35  Score=40.20  Aligned_cols=23  Identities=35%  Similarity=0.411  Sum_probs=12.3

Q ss_pred             hhcccchhhHhhhCCCccccCCCCc
Q 039505          118 LSQLSSLKFLKRNLGRNKLTGPLPV  142 (342)
Q Consensus       118 l~~l~~L~~l~~~ls~N~l~g~ip~  142 (342)
                      ++.+++|+.+  ++++|++++.+|.
T Consensus        98 ~~~l~~L~~L--~L~~N~l~~~~~~  120 (192)
T 1w8a_A           98 FLGLHQLKTL--NLYDNQISCVMPG  120 (192)
T ss_dssp             STTCTTCCEE--ECCSSCCCEECTT
T ss_pred             hcCCCCCCEE--ECCCCcCCeeCHH
Confidence            4445555555  5555555554443

>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*

Probab=87.77  E-value=0.32  Score=48.08  Aligned_cols=25  Identities=24%  Similarity=0.157  Sum_probs=12.9

Q ss_pred             hhhcccchhhHhhhCCCccccCCC-Ccc
Q 039505          117 FLSQLSSLKFLKRNLGRNKLTGPL-PVE  143 (342)
Q Consensus       117 ~l~~l~~L~~l~~~ls~N~l~g~i-p~~  143 (342)
                      .++.+++|+.|  ++++|++++.+ |..
T Consensus       503 ~l~~l~~L~~L--~Ls~N~l~~~~~p~~  528 (567)
T 1dce_A          503 GVANLPRLQEL--LLCNNRLQQSAAIQP  528 (567)
T ss_dssp             GGTTCSSCCEE--ECCSSCCCSSSTTGG
T ss_pred             ccCCCCCCcEE--ECCCCCCCCCCCcHH
Confidence            44555555555  55555555543 443

>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*

Probab=87.71  E-value=0.27  Score=48.55  Aligned_cols=62  Identities=19%  Similarity=0.121  Sum_probs=41.4

Q ss_pred             ccccccccCCCCcCccccccccCCcceeEEeeeccCcCCCCCCCCC----------------CCc--chhhhcccchhhH
Q 039505           66 QVWSLRSFPDGIRNCYRFNLTRDSKYLIRTTFIHGNYDEQNILPDF----------------KPV--PKFLSQLSSLKFL  127 (342)
Q Consensus        66 ~~~~~r~fp~~~~~C~~l~~~~~~~~llr~~fl~gN~~~~~~pp~f----------------~~i--p~~l~~l~~L~~l  127 (342)
                      +...+.++|+.++++.+|.          .+.+.+|.+++ +| .|                ..+  |..++.+++|+.|
T Consensus       471 s~N~l~~lp~~~~~l~~L~----------~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L  538 (567)
T 1dce_A          471 SHNRLRALPPALAALRCLE----------VLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLL  538 (567)
T ss_dssp             CSSCCCCCCGGGGGCTTCC----------EEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEE
T ss_pred             CcccccccchhhhcCCCCC----------EEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEE
Confidence            4455667777776666554          33444444443 22 22                133  8889999999999


Q ss_pred             hhhCCCccccCCCC
Q 039505          128 KRNLGRNKLTGPLP  141 (342)
Q Consensus       128 ~~~ls~N~l~g~ip  141 (342)
                        ++++|++++..|
T Consensus       539 --~L~~N~l~~~~~  550 (567)
T 1dce_A          539 --NLQGNSLCQEEG  550 (567)
T ss_dssp             --ECTTSGGGGSSS
T ss_pred             --EecCCcCCCCcc
Confidence              999999998765

>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}

Probab=87.57  E-value=0.13  Score=51.48  Aligned_cols=27  Identities=0%  Similarity=0.016  Sum_probs=14.9

Q ss_pred             cccccCCCCcCccccccccCCcceeEEeeeccCcCCC
Q 039505           69 SLRSFPDGIRNCYRFNLTRDSKYLIRTTFIHGNYDEQ  105 (342)
Q Consensus        69 ~~r~fp~~~~~C~~l~~~~~~~~llr~~fl~gN~~~~  105 (342)
                      ++..+|+.++++-+|.          ...+.+|.+++
T Consensus       194 ~l~~ip~~l~~l~~L~----------~L~Ls~n~l~~  220 (636)
T 4eco_A          194 NITFVSKAVMRLTKLR----------QFYMGNSPFVA  220 (636)
T ss_dssp             EEEEECGGGGGCTTCC----------EEEEESCCCCG
T ss_pred             CCccCCHHHhcccCCC----------EEECcCCcccc
Confidence            4444666666665443          55555555555

>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}

Probab=86.69  E-value=0.29  Score=49.92  Aligned_cols=30  Identities=30%  Similarity=0.360  Sum_probs=23.4

Q ss_pred             CcchhhhcccchhhHhhhCCCccccCCCCcccc
Q 039505          113 PVPKFLSQLSSLKFLKRNLGRNKLTGPLPVELI  145 (342)
Q Consensus       113 ~ip~~l~~l~~L~~l~~~ls~N~l~g~ip~~~~  145 (342)
                      .||..++.|++|+.|  ++++|.++ .+|..+.
T Consensus       284 ~lp~~~~~l~~L~~L--~L~~N~l~-~lp~~~~  313 (727)
T 4b8c_D          284 SLPAELGSCFQLKYF--YFFDNMVT-TLPWEFG  313 (727)
T ss_dssp             SCCSSGGGGTTCSEE--ECCSSCCC-CCCSSTT
T ss_pred             ccChhhcCCCCCCEE--ECCCCCCC-ccChhhh
Confidence            567788888888888  88888886 7776643

>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}

Probab=86.27  E-value=0.8  Score=37.39  Aligned_cols=18  Identities=33%  Similarity=0.527  Sum_probs=10.9

Q ss_pred             hcccchhhHhhhCCCccccC
Q 039505          119 SQLSSLKFLKRNLGRNKLTG  138 (342)
Q Consensus       119 ~~l~~L~~l~~~ls~N~l~g  138 (342)
                      ..+++|+.|  ++++|++++
T Consensus        78 ~~l~~L~~L--~L~~N~l~~   95 (174)
T 2r9u_A           78 DKLTQLTQL--DLNDNHLKS   95 (174)
T ss_dssp             TTCTTCCEE--ECCSSCCCC
T ss_pred             CCcchhhEE--ECCCCccce
Confidence            455666666  666666664

>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}

Probab=83.64  E-value=1  Score=37.42  Aligned_cols=29  Identities=10%  Similarity=0.021  Sum_probs=14.5

Q ss_pred             cccccccCCCCcCccccccccCCcceeEEeeeccCcCCC
Q 039505           67 VWSLRSFPDGIRNCYRFNLTRDSKYLIRTTFIHGNYDEQ  105 (342)
Q Consensus        67 ~~~~r~fp~~~~~C~~l~~~~~~~~llr~~fl~gN~~~~  105 (342)
                      ...+..+|+.+.++.+|          +.+.+.+|.++.
T Consensus        40 ~n~i~~ip~~~~~l~~L----------~~L~Ls~N~i~~   68 (193)
T 2wfh_A           40 GNQFTLVPKELSNYKHL----------TLIDLSNNRIST   68 (193)
T ss_dssp             SSCCCSCCGGGGGCTTC----------CEEECCSSCCCC
T ss_pred             CCcCchhHHHhhcccCC----------CEEECCCCcCCE
Confidence            33445555555554444          345555555553

>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D

Probab=83.46  E-value=1.3  Score=35.86  Aligned_cols=18  Identities=33%  Similarity=0.519  Sum_probs=9.9

Q ss_pred             hcccchhhHhhhCCCccccC
Q 039505          119 SQLSSLKFLKRNLGRNKLTG  138 (342)
Q Consensus       119 ~~l~~L~~l~~~ls~N~l~g  138 (342)
                      ..+++|+.+  ++++|++++
T Consensus        75 ~~l~~L~~L--~L~~N~l~~   92 (170)
T 3g39_A           75 DKLTQLTQL--SLNDNQLKS   92 (170)
T ss_dssp             TTCTTCCEE--ECCSSCCCC
T ss_pred             cCCCCCCEE--ECCCCccCE
Confidence            445555555  555555554

>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}

Probab=81.68  E-value=0.93  Score=38.45  Aligned_cols=22  Identities=36%  Similarity=0.302  Sum_probs=10.6

Q ss_pred             hhcccchhhHhhhCCCccccCCCC
Q 039505          118 LSQLSSLKFLKRNLGRNKLTGPLP  141 (342)
Q Consensus       118 l~~l~~L~~l~~~ls~N~l~g~ip  141 (342)
                      ++.+++|+.|  ++++|++++..|
T Consensus       101 ~~~l~~L~~L--~Ls~N~l~~~~~  122 (220)
T 2v70_A          101 FKGLESLKTL--MLRSNRITCVGN  122 (220)
T ss_dssp             GTTCSSCCEE--ECTTSCCCCBCT
T ss_pred             hcCCcCCCEE--ECCCCcCCeECH
Confidence            4444455555  555555544434

>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}

Probab=81.52  E-value=1.8  Score=36.79  Aligned_cols=22  Identities=32%  Similarity=0.597  Sum_probs=10.4

Q ss_pred             cchhhhcccchhhHhhhCCCcccc
Q 039505          114 VPKFLSQLSSLKFLKRNLGRNKLT  137 (342)
Q Consensus       114 ip~~l~~l~~L~~l~~~ls~N~l~  137 (342)
                      +|..+..+++|+.|  ++++|+++
T Consensus       127 lp~~~~~l~~L~~L--~L~~N~l~  148 (229)
T 3e6j_A          127 LPRGIERLTHLTHL--ALDQNQLK  148 (229)
T ss_dssp             CCTTGGGCTTCSEE--ECCSSCCC
T ss_pred             cCcccccCCCCCEE--ECCCCcCC
Confidence            34444444444444  44444444

>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7

Probab=80.21  E-value=0.94  Score=37.49  Aligned_cols=26  Identities=31%  Similarity=0.378  Sum_probs=22.2

Q ss_pred             cchhhhcccchhhHhhhCCCccccCCCC
Q 039505          114 VPKFLSQLSSLKFLKRNLGRNKLTGPLP  141 (342)
Q Consensus       114 ip~~l~~l~~L~~l~~~ls~N~l~g~ip  141 (342)
                      +|..+..+++|+.+  ++++|++++..+
T Consensus       118 ~~~~~~~l~~L~~L--~L~~N~l~c~c~  143 (192)
T 1w8a_A          118 MPGSFEHLNSLTSL--NLASNPFNCNCH  143 (192)
T ss_dssp             CTTSSTTCTTCCEE--ECTTCCBCCSGG
T ss_pred             CHHHhhcCCCCCEE--EeCCCCccCcCc
Confidence            36678889999999  999999998765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	342
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	8e-07
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-05
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	6e-05
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	1e-04
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-04
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	4e-04
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	7e-04
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	8e-04
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	0.001
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	0.001
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	0.001
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	0.001
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	0.001
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	0.001
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	0.001
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	0.001
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	0.002
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	0.002
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	0.002
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	0.003
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	0.003

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.3 bits (112), Expect = 8e-07
 Identities = 33/160 (20%), Positives = 54/160 (33%), Gaps = 66/160 (41%)

Query: 169 KGGFITVYHGQLVKSEVAMKMLSPSSSQG-----------------HVPIVE-------- 203
            G F TVY G+    +VA+KML+ ++                    HV I+         
Sbjct: 18  SGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAP 76

Query: 204 --------CHVGALITIPK-------------------EGLEYLHQGLKHPIIQRDMKST 236
                   C   +L                        +G++YLH      II RD+KS 
Sbjct: 77  QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSN 133

Query: 237 NILLNEK----------SRISPVEGGTHMSTTIAGTAGFL 266
           NI L+E           + +     G+H    ++G+  ++
Sbjct: 134 NIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 173

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (102), Expect = 2e-05
 Identities = 32/175 (18%), Positives = 55/175 (31%), Gaps = 66/175 (37%)

Query: 153 LELSLRVTNNFERVPY--KGGFITVYHGQLVKS--EVAMKMLSPSSSQG----------- 197
           +EL     ++FE++     G    V+      S   +A K++                  
Sbjct: 1   MELK---DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQV 57

Query: 198 -----HVPIVE-----------------CHVGALITIPK------------------EGL 217
                   IV                     G+L  + K                  +GL
Sbjct: 58  LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGL 117

Query: 218 EYLHQGLKHPIIQRDMKSTNILLNEKSRI------SPVEGGTHMSTTIAGTAGFL 266
            YL +  KH I+ RD+K +NIL+N +  I         +    M+ +  GT  ++
Sbjct: 118 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM 170

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.8 bits (97), Expect = 6e-05
 Identities = 13/62 (20%), Positives = 23/62 (37%), Gaps = 13/62 (20%)

Query: 215 EGLEYLHQGLKHPIIQRDMKSTNILLNEK----------SRISPVEGGTHMSTTIAGTAG 264
           +G+E+L        I RD+ + NILL+EK          +R    +              
Sbjct: 145 KGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 201

Query: 265 FL 266
           ++
Sbjct: 202 WM 203

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.2 bits (96), Expect = 1e-04
 Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 13/62 (20%)

Query: 215 EGLEYLHQGLKHPIIQRDMKSTNILLNEK----------SRISPVEGGTHMSTTIAGTAG 264
            G+ YLH      I  RD+K  N+LL+E+          + +        +   + GT  
Sbjct: 114 AGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 170

Query: 265 FL 266
           ++
Sbjct: 171 YV 172

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (94), Expect = 2e-04
 Identities = 8/61 (13%), Positives = 20/61 (32%), Gaps = 13/61 (21%)

Query: 215 EGLEYLHQGLKHPIIQRDMKSTNILLNEK----------SRISPVEGGTHMSTTIAGTAG 264
           +G+E+L        + RD+ + N+L+             +R    +    +         
Sbjct: 175 KGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVK 231

Query: 265 F 265
           +
Sbjct: 232 W 232

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (91), Expect = 4e-04
 Identities = 26/159 (16%), Positives = 50/159 (31%), Gaps = 56/159 (35%)

Query: 143 ELIGKQKNNALELSLRVTNNFERVPYKGGFITVYHGQLVKSE-----VAMKMLSPSSSQG 197
           EL+   ++  +  S  +  +F  V  +G F  VYHG L+ ++      A+K L+  +  G
Sbjct: 12  ELVQAVQHVVIGPS-SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 70

Query: 198 ----------------HVPIVECH----------------------------------VG 207
                           H  ++                                     V 
Sbjct: 71  EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 130

Query: 208 ALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
            LI    +  + +        + RD+ + N +L+EK  +
Sbjct: 131 DLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTV 169

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.7 bits (89), Expect = 7e-04
 Identities = 18/94 (19%), Positives = 35/94 (37%), Gaps = 10/94 (10%)

Query: 180 LVKSEVAMKMLSPSSSQGHVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNIL 239
           LV   V   + +         +    +  ++     GL++LH    H ++ RD+K  NIL
Sbjct: 92  LVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNIL 148

Query: 240 LNEKSRISPVEGGT-------HMSTTIAGTAGFL 266
           +    +I   + G           T++  T  + 
Sbjct: 149 VTSSGQIKLADFGLARIYSFQMALTSVVVTLWYR 182

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (89), Expect = 8e-04
 Identities = 28/157 (17%), Positives = 49/157 (31%), Gaps = 62/157 (39%)

Query: 169 KGGFITVYHGQLVKS--EVAMKMLSPSSSQG---------------HVPIVE-------- 203
           +G   TVY    V +  EVA++ ++                     +  IV         
Sbjct: 30  QGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVG 89

Query: 204 ---------CHVGALITIPK-----------------EGLEYLHQGLKHPIIQRDMKSTN 237
                       G+L  +                   + LE+LH    + +I RD+KS N
Sbjct: 90  DELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDN 146

Query: 238 ILLNEKSRI--------SPVEGGTHMSTTIAGTAGFL 266
           ILL     +        + +       +T+ GT  ++
Sbjct: 147 ILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWM 183

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (88), Expect = 0.001
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 8/59 (13%)

Query: 215 EGLEYLHQGLKHPIIQRDMKSTNILLNEKS---RIS----PVEGGTHMSTTIAGTAGFL 266
           +GL++LH     PII RD+K  NI +   +   +I             +  + GT  F+
Sbjct: 123 KGLQFLHT-RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFM 180

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (87), Expect = 0.001
 Identities = 30/167 (17%), Positives = 45/167 (26%), Gaps = 69/167 (41%)

Query: 169 KGGFITVYHGQLVKSEVAMKMLSPSSSQG--------------HVPIVE----------- 203
           KG F  V+ G+    EVA+K+ S    +               H  I+            
Sbjct: 13  KGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGT 72

Query: 204 ----------CHVGALITIPKE-----------------GLEYLHQGL-----KHPIIQR 231
                        G+L                       GL +LH  +     K  I  R
Sbjct: 73  WTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR 132

Query: 232 DMKSTNILLNEKSRI------------SPVEGGTHMSTTIAGTAGFL 266
           D+KS NIL+ +                S  +          GT  ++
Sbjct: 133 DLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 179

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 37.9 bits (87), Expect = 0.001
 Identities = 17/99 (17%), Positives = 28/99 (28%), Gaps = 13/99 (13%)

Query: 177 HGQLVKSEVAMKMLSPSSSQGHVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKST 236
           H     S   +   +  SS G  P+       +      G+ YL +      + RD+ + 
Sbjct: 113 HTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLATR 169

Query: 237 NILLNEK----------SRISPVEGGTHMSTTIAGTAGF 265
           N L+ E           SR              A    +
Sbjct: 170 NCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRW 208

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (87), Expect = 0.001
 Identities = 22/138 (15%), Positives = 43/138 (31%), Gaps = 54/138 (39%)

Query: 169 KGGFITVYHGQLVKSEVAMKMLSPSSSQ-------------GHVPIVE------------ 203
           KG F  V  G    ++VA+K +   ++               H  +V+            
Sbjct: 17  KGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGL 76

Query: 204 ------CHVGALITIPK--------------------EGLEYLHQGLKHPIIQRDMKSTN 237
                    G+L+   +                    E +EYL     +  + RD+ + N
Sbjct: 77  YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARN 133

Query: 238 ILLNEKSRISPVEGGTHM 255
           +L++E +     + G   
Sbjct: 134 VLVSEDNVAKVSDFGLTK 151

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (87), Expect = 0.001
 Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 3/81 (3%)

Query: 166 VPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGHVPIVECHVGALITIPKEGLEYLHQGLK 225
           V     F    +  ++    A   +     +   P+ E  +  +     + L YLH    
Sbjct: 72  VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD--- 128

Query: 226 HPIIQRDMKSTNILLNEKSRI 246
           + II RD+K+ NIL      I
Sbjct: 129 NKIIHRDLKAGNILFTLDGDI 149

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (87), Expect = 0.001
 Identities = 31/239 (12%), Positives = 63/239 (26%), Gaps = 79/239 (33%)

Query: 169 KGGFITVYHGQLV-KSEVAMKMLSPSSSQG--------------HVPIVE---------- 203
            G F  V+ G  + K +VA+K +   +                 H  +V+          
Sbjct: 15  SGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAP 74

Query: 204 -------CHVGALITIPKEG----------------LEYLHQGLKHPIIQRDMKSTNILL 240
                     G L    +                   E +    +  +I RD+ + N L+
Sbjct: 75  ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV 134

Query: 241 NEKSRI---------SPVEGGTHMSTTIAGTAGFL----------NTKNPVIS------- 274
            E   I           ++     ST       +           ++K+ V S       
Sbjct: 135 GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWE 194

Query: 275 -----KSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVV 328
                K      S+      +   F+     ++     +I       +   RP  ++++
Sbjct: 195 VFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLL 253

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (87), Expect = 0.001
 Identities = 14/110 (12%), Positives = 31/110 (28%), Gaps = 12/110 (10%)

Query: 166 VPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGHVPIVECHVGALITIPKEGLEYLHQGLK 225
           V   G         ++   +A   L     +         +  +     E +EYL     
Sbjct: 62  VQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES--- 118

Query: 226 HPIIQRDMKSTNILLNEKSRI---------SPVEGGTHMSTTIAGTAGFL 266
              + RD+ + N L+N++  +           ++     S        + 
Sbjct: 119 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWS 168

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 37.7 bits (87), Expect = 0.001
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 7/56 (12%)

Query: 215 EGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGG----THMSTTIAGTAGFL 266
           +GL YLH    H +I RD+K+ NILL+E   +   + G       + +  GT  ++
Sbjct: 126 QGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWM 178

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (86), Expect = 0.002
 Identities = 12/62 (19%), Positives = 24/62 (38%), Gaps = 10/62 (16%)

Query: 215 EGLEYLHQ--GLKHPIIQRDMKSTNILLNEKSRI--------SPVEGGTHMSTTIAGTAG 264
             L+  H+     H ++ RD+K  N+ L+ K  +          +   T  +    GT  
Sbjct: 120 LALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPY 179

Query: 265 FL 266
           ++
Sbjct: 180 YM 181

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (85), Expect = 0.002
 Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 9/58 (15%)

Query: 215 EGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGG------THMSTTIAGTAGFL 266
             L Y H      +I RD+K  N+LL     +   + G      +   TT+ GT  +L
Sbjct: 117 NALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYL 171

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (85), Expect = 0.002
 Identities = 10/62 (16%), Positives = 20/62 (32%), Gaps = 13/62 (20%)

Query: 215 EGLEYLHQGLKHPIIQRDMKSTNILLNEK----------SRISPVEGGTHMSTTIAGTAG 264
           +G+ +L        I RD+ + NILL             +R    +    +         
Sbjct: 156 KGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK 212

Query: 265 FL 266
           ++
Sbjct: 213 WM 214

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (84), Expect = 0.003
 Identities = 23/159 (14%), Positives = 44/159 (27%), Gaps = 65/159 (40%)

Query: 169 KGGFITVYHGQLV-KSEVAMKMLSPSSSQG--------------HVPIVE---------- 203
            G F  V+ G     ++VA+K L   S                 H  +V           
Sbjct: 23  AGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI 82

Query: 204 ------CHVGALITIPK--------------------EGLEYLHQGLKHPIIQRDMKSTN 237
                    G+L+   K                    EG+ ++ +      I RD+++ N
Sbjct: 83  YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAAN 139

Query: 238 ILLNEK----------SRISPVEGGTHMSTTIAGTAGFL 266
           IL+++           +R+   +              + 
Sbjct: 140 ILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWT 177

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 36.6 bits (84), Expect = 0.003
 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 3/32 (9%)

Query: 215 EGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
            GLE++H      ++ RD+K  NILL+E   +
Sbjct: 118 LGLEHMHN---RFVVYRDLKPANILLDEHGHV 146

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	342
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.94
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.94
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.93
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.93
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.93
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.93
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.93
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.93
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.92
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.92
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.92
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.92
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.92
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.91
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.91
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.91
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.91
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.91
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.91
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.91
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.91
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.9
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.9
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.9
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.9
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.9
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.9
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.9
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.9
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.9
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.9
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.9
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.9
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.89
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.89
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.89
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.89
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.89
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.89
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.89
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.88
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.88
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.88
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.88
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.88
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.87
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.87
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.87
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.87
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.87
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.86
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.86
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.86
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.86
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.85
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.85
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.85
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.85
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.82
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.81
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.81
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.79
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.51
d1ogqa_	313	Polygalacturonase inhibiting protein PGIP {Kidney	93.93
d1ogqa_	313	Polygalacturonase inhibiting protein PGIP {Kidney	91.29
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	88.72
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	85.08
d1dcea3	124	Rab geranylgeranyltransferase alpha-subunit, C-ter	83.18

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.94  E-value=2.2e-28  Score=224.28  Aligned_cols=184  Identities=16%  Similarity=0.197  Sum_probs=123.6

Q ss_pred             CCHHHHHHHhhccC-----------cccCcCCCeeEEEEEECCC-----eEEEEEccCCCCCCCcc--------------
Q 039505          151 NALELSLRVTNNFE-----------RVPYKGGFITVYHGQLVKS-----EVAMKMLSPSSSQGHVP--------------  200 (342)
Q Consensus       151 ~~~~~l~~at~~f~-----------~~lG~G~fG~Vykg~~~~~-----~vAVK~l~~~~~~~~~~--------------  200 (342)
                      ++++++.+++.+|+           ++||+|+||+||+|+++..     .||||++.........+              
T Consensus         7 ~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H   86 (299)
T d1jpaa_           7 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH   86 (299)
T ss_dssp             GGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCC
T ss_pred             CCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCC
Confidence            35566777777764           5799999999999998532     58999987543322111              


Q ss_pred             -----EE-EeeCC---cEEE--E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecC
Q 039505          201 -----IV-ECHVG---ALIT--I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNE  242 (342)
Q Consensus       201 -----Lv-~c~~~---~lv~--m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~  242 (342)
                           ++ +|..+   ++|+  +                           +|+||+|||+   ++|+||||||+||||+.
T Consensus        87 pnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHrDlKp~NILl~~  163 (299)
T d1jpaa_          87 PNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNS  163 (299)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECT
T ss_pred             CCCccEEEEEeeCCEEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhh---CCCccCccccceEEECC
Confidence                 55 56544   4454  2                           9999999999   99999999999999998


Q ss_pred             C--CccccCCCCCcc-----------ccccccCcceee--------------------------c-CCCCcccccccccc
Q 039505          243 K--SRISPVEGGTHM-----------STTIAGTAGFLN--------------------------T-KNPVISKSIENGNS  282 (342)
Q Consensus       243 ~--a~~~~~~~~~~~-----------~~~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~  282 (342)
                      +  .|+.+++.....           .....||+.|||                          | |+.||.......  
T Consensus       164 ~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~--  241 (299)
T d1jpaa_         164 NLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQD--  241 (299)
T ss_dssp             TCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--
T ss_pred             CCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHH--
Confidence            8  555555433211           112457899998                          6 899987654322  


Q ss_pred             cccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccCCCCCCC
Q 039505          283 HLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNGSRITIK  342 (342)
Q Consensus       283 ~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~~~~~~k  342 (342)
                       +..  .+......+.+.+++..+.+++.+||+.+|++||||.||++.|+++.++...+|
T Consensus       242 -~~~--~i~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~~p~slk  298 (299)
T d1jpaa_         242 -VIN--AIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNPNSLK  298 (299)
T ss_dssp             -HHH--HHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGGGT
T ss_pred             -HHH--HHHcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcChhhCC
Confidence             111  111111122334456678899999999999999999999999998766554443

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=7.2e-28  Score=218.40  Aligned_cols=168  Identities=23%  Similarity=0.303  Sum_probs=118.9

Q ss_pred             cccCcCCCeeEEEEEECCCeEEEEEccCCCCCCCcc--------------------EE-EeeCC--cEEE--E-------
Q 039505          165 RVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGHVP--------------------IV-ECHVG--ALIT--I-------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~~vAVK~l~~~~~~~~~~--------------------Lv-~c~~~--~lv~--m-------  212 (342)
                      +.||+|+||+||+|++++ .||||+++.........                    ++ +|.++  ++|+  +       
T Consensus        14 ~~lG~G~fg~Vy~~~~~~-~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~~~~~lv~Ey~~~g~L~~   92 (276)
T d1uwha_          14 QRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYH   92 (276)
T ss_dssp             SEEEECSSCEEEEEESSS-EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEECCCEEEHHH
T ss_pred             EEEeeCCCcEEEEEEECC-EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEeccEEEEEEecCCCCCHHH
Confidence            899999999999998754 79999997654322211                    44 66555  4444  2       


Q ss_pred             --------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc--------cccccccC
Q 039505          213 --------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH--------MSTTIAGT  262 (342)
Q Consensus       213 --------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~--------~~~~~~Gt  262 (342)
                                          +|+||+|||+   .+||||||||+||||+++  .|+.+++....        ......||
T Consensus        93 ~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~---~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt  169 (276)
T d1uwha_          93 HLHIIETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS  169 (276)
T ss_dssp             HHHTSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTSSEEECCCCCSCC------------CCCC
T ss_pred             HHhhccCCCCHHHHHHHHHHHHHHHHHHhc---CCEeccccCHHHEEEcCCCCEEEccccceeeccccCCcccccccccC
Confidence                                8999999999   999999999999999988  55665554321        12346899


Q ss_pred             cceee-----------------------------cCCCCcccccccc-cccccccccccccCCCCCChHHHHHHHHHHHH
Q 039505          263 AGFLN-----------------------------TKNPVISKSIENG-NSHLRDKSTVDLSFKGEFDIISVGKAVEIAMA  312 (342)
Q Consensus       263 ~~y~a-----------------------------tG~~P~~~~~~~~-~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~  312 (342)
                      +.|||                             ||+.||....... ....+......|.+ ...+..++..+.+++.+
T Consensus       170 ~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~l~~li~~  248 (276)
T d1uwha_         170 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDL-SKVRSNCPKAMKRLMAE  248 (276)
T ss_dssp             GGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCG-GGSCTTCCHHHHHHHHH
T ss_pred             cccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcc-hhccccchHHHHHHHHH
Confidence            99999                             8999987654322 00111122222222 12233445668899999


Q ss_pred             cccccCCCCCCHHHHHHHHHhccCC
Q 039505          313 SVSSKVNRRPLMNQVVMVREQGNGS  337 (342)
Q Consensus       313 Cl~~~P~~RPsm~eV~~~L~~i~~~  337 (342)
                      ||+.+|++||||.||++.|+.++++
T Consensus       249 cl~~dp~~RPt~~~il~~Le~l~~~  273 (276)
T d1uwha_         249 CLKKKRDERPLFPQILASIELLARS  273 (276)
T ss_dssp             HTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HcCCCHhHCcCHHHHHHHHHHHHHc
Confidence            9999999999999999999998765

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.3e-27  Score=215.06  Aligned_cols=165  Identities=16%  Similarity=0.192  Sum_probs=111.6

Q ss_pred             cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCCc---c--------------EE-EeeCC---cEEE--E--------
Q 039505          165 RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGHV---P--------------IV-ECHVG---ALIT--I--------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~~---~--------------Lv-~c~~~---~lv~--m--------  212 (342)
                      +.||+|+||+||+|++.++ .||||+++........   |              ++ +|...   ++|+  +        
T Consensus        11 ~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~~g~L~~~   90 (263)
T d1sm2a_          11 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY   90 (263)
T ss_dssp             EEEECCSSCCEEEEEETTTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHH
T ss_pred             EEEeeCCCeEEEEEEECCCCEEEEEEECCCcCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecCCCcHHHH
Confidence            8899999999999999888 8999999764422111   1              55 56544   5555  2        


Q ss_pred             -------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-------cccccccCcc
Q 039505          213 -------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-------MSTTIAGTAG  264 (342)
Q Consensus       213 -------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-------~~~~~~Gt~~  264 (342)
                                         +|+||+|||+   .+|+||||||+|||+|++  .++.+++....       ......||+.
T Consensus        91 l~~~~~~~~~~~~~~i~~qia~gl~~lH~---~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~  167 (263)
T d1sm2a_          91 LRTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK  167 (263)
T ss_dssp             HHTTTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCTTCSGGGEEECGGGCEEECSCC------------------CTT
T ss_pred             hhccccCCCHHHHHHHHHHHHHHHHhhhc---cceeecccchhheeecCCCCeEecccchheeccCCCceeecceecCcc
Confidence                               9999999999   999999999999999988  55655543321       1223578999


Q ss_pred             eee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHccccc
Q 039505          265 FLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSK  317 (342)
Q Consensus       265 y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~  317 (342)
                      |+|                          | |++|+.......   +..  .+........+..+..++.+++.+||+.+
T Consensus       168 y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~---~~~--~i~~~~~~~~p~~~~~~l~~li~~cl~~~  242 (263)
T d1sm2a_         168 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---VVE--DISTGFRLYKPRLASTHVYQIMNHCWKER  242 (263)
T ss_dssp             SCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHH---HHH--HHHHTCCCCCCTTSCHHHHHHHHHHTCSS
T ss_pred             cCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHH---HHH--HHHhcCCCCCccccCHHHHHHHHHHccCC
Confidence            998                          6 455554332211   111  01111111223334556889999999999


Q ss_pred             CCCCCCHHHHHHHHHhccCC
Q 039505          318 VNRRPLMNQVVMVREQGNGS  337 (342)
Q Consensus       318 P~~RPsm~eV~~~L~~i~~~  337 (342)
                      |++||||+||++.|+++.++
T Consensus       243 p~~Rps~~~il~~L~~i~es  262 (263)
T d1sm2a_         243 PEDRPAFSRLLRQLAEIAES  262 (263)
T ss_dssp             GGGSCCHHHHHHHHHHHHHH
T ss_pred             HhHCcCHHHHHHHHHHHHhC
Confidence            99999999999999998753

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=7.9e-27  Score=211.00  Aligned_cols=163  Identities=16%  Similarity=0.183  Sum_probs=113.9

Q ss_pred             cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCC---cc--------------EE-EeeCC--cEEE--E---------
Q 039505          165 RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGH---VP--------------IV-ECHVG--ALIT--I---------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~---~~--------------Lv-~c~~~--~lv~--m---------  212 (342)
                      +.||+|+||+||+|.++++ .||||+++.......   +|              ++ +|.++  ++|+  +         
T Consensus        19 ~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~iv~Ey~~~g~L~~~~   98 (272)
T d1qpca_          19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL   98 (272)
T ss_dssp             EEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECCTTCBHHHHT
T ss_pred             EEEecCCCcEEEEEEECCCCEEEEEEEccCcCCHHHHHHHHHHHHhCCCCCEeEEEeeeccCCeEEEEEeCCCCcHHHHH
Confidence            7899999999999999887 999999976542211   11              44 56555  4555  2         


Q ss_pred             -------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-------cccccccCcc
Q 039505          213 -------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-------MSTTIAGTAG  264 (342)
Q Consensus       213 -------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-------~~~~~~Gt~~  264 (342)
                                         ||+||+|||+   .+|+||||||+||||+++  .++.+++....       ......||+.
T Consensus        99 ~~~~~~~l~~~~~~~i~~qi~~gl~~lH~---~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~  175 (272)
T d1qpca_          99 KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK  175 (272)
T ss_dssp             TSHHHHTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTT
T ss_pred             hhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccchhheeeecccceeeccccceEEccCCccccccccCCccc
Confidence                               8999999999   999999999999999998  55665554321       1233678999


Q ss_pred             eee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccC
Q 039505          265 FLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKV  318 (342)
Q Consensus       265 y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P  318 (342)
                      |+|                          ||..|+.......  .+..  .+........+......+.+++.+||+.+|
T Consensus       176 y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~--~~~~--~i~~~~~~~~p~~~~~~l~~li~~cl~~~P  251 (272)
T d1qpca_         176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--EVIQ--NLERGYRMVRPDNCPEELYQLMRLCWKERP  251 (272)
T ss_dssp             TSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHH--HHHTTCCCCCCTTCCHHHHHHHHHHTCSSG
T ss_pred             ccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHH--HHHH--HHHhcCCCCCcccChHHHHHHHHHHcCCCH
Confidence            999                          7655543322211  1111  011111112233345568899999999999


Q ss_pred             CCCCCHHHHHHHHHhc
Q 039505          319 NRRPLMNQVVMVREQG  334 (342)
Q Consensus       319 ~~RPsm~eV~~~L~~i  334 (342)
                      ++||||.||++.|+.+
T Consensus       252 ~~Rpt~~ei~~~L~~~  267 (272)
T d1qpca_         252 EDRPTFDYLRSVLEDF  267 (272)
T ss_dssp             GGSCCHHHHHHHHHHH
T ss_pred             hHCcCHHHHHHHhhhh
Confidence            9999999999999875

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=9.3e-27  Score=208.98  Aligned_cols=166  Identities=17%  Similarity=0.199  Sum_probs=118.4

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCCc---c--------------EE-EeeCC---cEEE--E--
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGHV---P--------------IV-ECHVG---ALIT--I--  212 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~~---~--------------Lv-~c~~~---~lv~--m--  212 (342)
                      ++|.  +.||+|+||+||+|+++++ .||||+++........   |              ++ +|.+.   ++|+  +  
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~~   83 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMAN   83 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSSCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCTT
T ss_pred             HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcCCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccCC
Confidence            3455  8999999999999999878 9999999875432211   1              55 66554   4444  2  


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-------cccc
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-------MSTT  258 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-------~~~~  258 (342)
                                               +|+||+|||+   .+|+||||||+|||++++  .++.+++....       ....
T Consensus        84 g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~---~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~  160 (258)
T d1k2pa_          84 GCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG  160 (258)
T ss_dssp             EEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHH---TTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCCC
T ss_pred             CcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhh---cCcccccccceeEEEcCCCcEEECcchhheeccCCCceeecc
Confidence                                     8999999999   999999999999999998  44555443311       1223


Q ss_pred             cccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHH
Q 039505          259 IAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAM  311 (342)
Q Consensus       259 ~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~  311 (342)
                      ..||+.|+|                          | |+.||.......   +.. .+.. ......+......+.+++.
T Consensus       161 ~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~---~~~-~i~~-~~~~~~p~~~~~~l~~li~  235 (258)
T d1k2pa_         161 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE---TAE-HIAQ-GLRLYRPHLASEKVYTIMY  235 (258)
T ss_dssp             SCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH---HHH-HHHT-TCCCCCCTTCCHHHHHHHH
T ss_pred             cCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHH---HHH-HHHh-CCCCCCcccccHHHHHHHH
Confidence            678999999                          6 899988664332   111 1111 1111223344566889999


Q ss_pred             HcccccCCCCCCHHHHHHHHHhc
Q 039505          312 ASVSSKVNRRPLMNQVVMVREQG  334 (342)
Q Consensus       312 ~Cl~~~P~~RPsm~eV~~~L~~i  334 (342)
                      +||+.+|++|||+.||++.|.+|
T Consensus       236 ~cl~~dP~~RPt~~eil~~L~di  258 (258)
T d1k2pa_         236 SCWHEKADERPTFKILLSNILDV  258 (258)
T ss_dssp             HTTCSSGGGSCCHHHHHHHHHCC
T ss_pred             HHccCCHhHCcCHHHHHHHhhCC
Confidence            99999999999999999999764

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=3.6e-27  Score=214.45  Aligned_cols=166  Identities=19%  Similarity=0.226  Sum_probs=112.3

Q ss_pred             cccCcCCCeeEEEEEECCC------eEEEEEccCCCCCCCc-----c--------------EE-EeeCC---cEEE--E-
Q 039505          165 RVPYKGGFITVYHGQLVKS------EVAMKMLSPSSSQGHV-----P--------------IV-ECHVG---ALIT--I-  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~------~vAVK~l~~~~~~~~~-----~--------------Lv-~c~~~---~lv~--m-  212 (342)
                      ++||+|+||+||+|.++.+      .||||+++........     |              ++ +|.+.   ++++  + 
T Consensus        13 ~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v~e~~~   92 (283)
T d1mqba_          13 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYME   92 (283)
T ss_dssp             EEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred             eEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEEEEecc
Confidence            8999999999999997643      6999999765432211     1              44 55544   4444  2 


Q ss_pred             --------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc---------c
Q 039505          213 --------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH---------M  255 (342)
Q Consensus       213 --------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~---------~  255 (342)
                                                +|+||+|||+   .+|+||||||+||||+.+  +|+.+++....         .
T Consensus        93 ~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~---~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~  169 (283)
T d1mqba_          93 NGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYT  169 (283)
T ss_dssp             TEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC-------------
T ss_pred             cCcchhhhhcccccccHHHHHHHHHHHHHhhhhccc---cccccCccccceEEECCCCeEEEcccchhhcccCCCccceE
Confidence                                      9999999999   999999999999999998  56665554321         1


Q ss_pred             ccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHH
Q 039505          256 STTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEI  309 (342)
Q Consensus       256 ~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l  309 (342)
                      .....||+.|||                          ||..|+.......  .+.  +.+......+.+..++..+.++
T Consensus       170 ~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~--~~~--~~i~~~~~~~~~~~~~~~l~~l  245 (283)
T d1mqba_         170 TSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH--EVM--KAINDGFRLPTPMDCPSAIYQL  245 (283)
T ss_dssp             ----CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHH--HHHHTTCCCCCCTTCBHHHHHH
T ss_pred             eccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHH--HHH--HHHhccCCCCCchhhHHHHHHH
Confidence            123568999999                          6554443322111  111  1112222223344556678999


Q ss_pred             HHHcccccCCCCCCHHHHHHHHHhccCC
Q 039505          310 AMASVSSKVNRRPLMNQVVMVREQGNGS  337 (342)
Q Consensus       310 ~~~Cl~~~P~~RPsm~eV~~~L~~i~~~  337 (342)
                      +.+||+.+|++||||.||++.|+.+.+.
T Consensus       246 i~~cl~~~p~~RPt~~eil~~L~~l~~~  273 (283)
T d1mqba_         246 MMQCWQQERARRPKFADIVSILDKLIRA  273 (283)
T ss_dssp             HHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             HHHHCcCCHhHCcCHHHHHHHHHHHhhC
Confidence            9999999999999999999999887544

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=1.5e-26  Score=210.75  Aligned_cols=166  Identities=18%  Similarity=0.180  Sum_probs=115.9

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc---c--------------EE-EeeCC---cEEE--E-------
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV---P--------------IV-ECHVG---ALIT--I-------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~---~--------------Lv-~c~~~---~lv~--m-------  212 (342)
                      +.||+|+||+||+|++..+  .||||+++........   |              ++ +|.++   ++++  +       
T Consensus        23 ~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~  102 (287)
T d1opja_          23 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD  102 (287)
T ss_dssp             EETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHH
T ss_pred             eEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeecccCcchHH
Confidence            8999999999999999764  8999999765432211   1              44 55444   4444  2       


Q ss_pred             ---------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-------cccccccC
Q 039505          213 ---------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-------MSTTIAGT  262 (342)
Q Consensus       213 ---------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-------~~~~~~Gt  262 (342)
                                           +|+||+|||+   .+|+||||||+||||+++  .|+.+++....       ......||
T Consensus       103 ~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~---~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~~~~~g~  179 (287)
T d1opja_         103 YLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP  179 (287)
T ss_dssp             HHHHSCTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEETTEEEC
T ss_pred             HhhhccccchHHHHHHHHHHHHHHHHHHHHH---CCcccCccccCeEEECCCCcEEEccccceeecCCCCceeecccccc
Confidence                                 8999999999   999999999999999988  56665554322       11234688


Q ss_pred             cceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccc
Q 039505          263 AGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSS  316 (342)
Q Consensus       263 ~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~  316 (342)
                      +.|+|                          ||..|+.......  .+.  +.+......+.+......+.+++.+||+.
T Consensus       180 ~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~--~~~--~~i~~~~~~~~~~~~~~~l~~li~~cl~~  255 (287)
T d1opja_         180 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVY--ELLEKDYRMERPEGCPEKVYELMRACWQW  255 (287)
T ss_dssp             GGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHH--HHHHTTCCCCCCTTCCHHHHHHHHHHTCS
T ss_pred             ccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHH--HHH--HHHhcCCCCCCCccchHHHHHHHHHHcCC
Confidence            89998                          7666554332211  111  12222222333444556789999999999


Q ss_pred             cCCCCCCHHHHHHHHHhccCC
Q 039505          317 KVNRRPLMNQVVMVREQGNGS  337 (342)
Q Consensus       317 ~P~~RPsm~eV~~~L~~i~~~  337 (342)
                      +|++||||.||++.|+.+...
T Consensus       256 dP~~Rps~~ei~~~L~~~~~~  276 (287)
T d1opja_         256 NPSDRPSFAEIHQAFETMFQE  276 (287)
T ss_dssp             SGGGSCCHHHHHHHHHHTTSS
T ss_pred             CHhHCcCHHHHHHHHHHHHHh
Confidence            999999999999999987543

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.1e-26  Score=208.79  Aligned_cols=162  Identities=16%  Similarity=0.188  Sum_probs=111.6

Q ss_pred             cccCcCCCeeEEEEEECCC----eEEEEEccCCCCCCCc------c--------------EE-EeeCC--cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVKS----EVAMKMLSPSSSQGHV------P--------------IV-ECHVG--ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~----~vAVK~l~~~~~~~~~------~--------------Lv-~c~~~--~lv~--m---  212 (342)
                      +.||+|+||+||+|.++++    .||||+++........      |              ++ +|..+  ++|+  +   
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~~~~lvmE~~~~g   92 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELG   92 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEEEEECCTTE
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccCCEEEEEEcCCCC
Confidence            5799999999999987543    7999999765432211      1              55 66555  5555  2   


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc---------cccc
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH---------MSTT  258 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~---------~~~~  258 (342)
                                             ||+||+|||+   .+||||||||+||||+.+  .++.+++....         ....
T Consensus        93 ~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~---~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~  169 (277)
T d1xbba_          93 PLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH  169 (277)
T ss_dssp             EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC---
T ss_pred             cHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHh---CCcccCCCcchhhcccccCcccccchhhhhhccccccccccccc
Confidence                                   8999999999   999999999999999987  45555443321         1123


Q ss_pred             cccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHH
Q 039505          259 IAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAM  311 (342)
Q Consensus       259 ~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~  311 (342)
                      ..||+.|||                          | |+.||.......   +.  ..+......+.+..++.++.+++.
T Consensus       170 ~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~---~~--~~i~~~~~~~~p~~~~~~~~~li~  244 (277)
T d1xbba_         170 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE---VT--AMLEKGERMGCPAGCPREMYDLMN  244 (277)
T ss_dssp             -CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH---HH--HHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred             cCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHH---HH--HHHHcCCCCCCCcccCHHHHHHHH
Confidence            579999999                          6 899998654322   11  111111112233445566889999


Q ss_pred             HcccccCCCCCCHHHHHHHHHhc
Q 039505          312 ASVSSKVNRRPLMNQVVMVREQG  334 (342)
Q Consensus       312 ~Cl~~~P~~RPsm~eV~~~L~~i  334 (342)
                      +||+.+|++||||.+|++.|+..
T Consensus       245 ~cl~~dp~~RPs~~~i~~~L~~~  267 (277)
T d1xbba_         245 LCWTYDVENRPGFAAVELRLRNY  267 (277)
T ss_dssp             HHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             HHcCCCHhHCcCHHHHHHHhhCH
Confidence            99999999999999999988764

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=3.9e-26  Score=207.84  Aligned_cols=162  Identities=16%  Similarity=0.173  Sum_probs=114.5

Q ss_pred             ccCcCCCeeEEEEEECC---C-eEEEEEccCCCCCCCcc-------------------EE-EeeCC--cEEE--E-----
Q 039505          166 VPYKGGFITVYHGQLVK---S-EVAMKMLSPSSSQGHVP-------------------IV-ECHVG--ALIT--I-----  212 (342)
Q Consensus       166 ~lG~G~fG~Vykg~~~~---~-~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~--~lv~--m-----  212 (342)
                      .||+|+||+||+|.++.   + .||||+++........+                   ++ +|..+  ++|+  +     
T Consensus        16 ~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~lvmE~~~~g~L   95 (285)
T d1u59a_          16 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPL   95 (285)
T ss_dssp             EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTEEH
T ss_pred             EEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeeccCeEEEEEEeCCCCcH
Confidence            49999999999998753   2 79999997654322111                   55 66555  5555  2     


Q ss_pred             ----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc---------ccccc
Q 039505          213 ----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH---------MSTTI  259 (342)
Q Consensus       213 ----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~---------~~~~~  259 (342)
                                            +|+||+|||+   .+|+||||||+||||+.+  .++.+++....         .....
T Consensus        96 ~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~---~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~  172 (285)
T d1u59a_          96 HKFLVGKREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG  172 (285)
T ss_dssp             HHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSS
T ss_pred             HHHhhccccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCcCchhheeeccCCceeeccchhhhccccccccccccccc
Confidence                                  9999999999   999999999999999988  55555544321         11235


Q ss_pred             ccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHH
Q 039505          260 AGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMA  312 (342)
Q Consensus       260 ~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~  312 (342)
                      .||+.|+|                          | |+.||.......   +..  .+......+.+..++.++.+++.+
T Consensus       173 ~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~---~~~--~i~~~~~~~~p~~~~~~l~~li~~  247 (285)
T d1u59a_         173 KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE---VMA--FIEQGKRMECPPECPPELYALMSD  247 (285)
T ss_dssp             CCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH---HHH--HHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred             ccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHH---HHH--HHHcCCCCCCCCcCCHHHHHHHHH
Confidence            68999998                          6 999998654322   111  111111122234455668899999


Q ss_pred             cccccCCCCCCHHHHHHHHHhcc
Q 039505          313 SVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       313 Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                      ||+.+|++||||.+|++.|+.+.
T Consensus       248 cl~~~p~~RPs~~~i~~~L~~~~  270 (285)
T d1u59a_         248 CWIYKWEDRPDFLTVEQRMRACY  270 (285)
T ss_dssp             TTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HcCCCHhHCcCHHHHHHHHHHHH
Confidence            99999999999999999998653

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=4.8e-26  Score=210.24  Aligned_cols=166  Identities=19%  Similarity=0.245  Sum_probs=112.6

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC------eEEEEEccCCCCCCCcc-------------------EE-EeeCC--cEEE
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS------EVAMKMLSPSSSQGHVP-------------------IV-ECHVG--ALIT  211 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~------~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~--~lv~  211 (342)
                      +|+  ++||+|+||+||+|.+..+      .||||+++........+                   ++ +|.++  .+++
T Consensus        10 dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~v~   89 (317)
T d1xkka_          10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT   89 (317)
T ss_dssp             TEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEE
T ss_pred             HCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeeEEE
Confidence            466  8999999999999998543      58999987553322211                   55 67666  3333


Q ss_pred             --E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCC--------
Q 039505          212 --I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGG--------  252 (342)
Q Consensus       212 --m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~--------  252 (342)
                        +                           ||+||+|||+   ++||||||||+|||++.+  .++.+++..        
T Consensus        90 e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~---~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~  166 (317)
T d1xkka_          90 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK  166 (317)
T ss_dssp             ECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC
T ss_pred             EeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHH---cCcccCcchhhcceeCCCCCeEeeccccceecccccc
Confidence              2                           9999999999   999999999999999988  455544322        


Q ss_pred             CccccccccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHH
Q 039505          253 THMSTTIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGK  305 (342)
Q Consensus       253 ~~~~~~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~  305 (342)
                      ........||+.|+|                          | |++|++.........     .+......+.+..+...
T Consensus       167 ~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~-----~i~~~~~~~~p~~~~~~  241 (317)
T d1xkka_         167 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS-----ILEKGERLPQPPICTID  241 (317)
T ss_dssp             --------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHH-----HHHHTCCCCCCTTBCHH
T ss_pred             cccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHH-----HHHcCCCCCCCcccCHH
Confidence            112233568999999                          6 788887654332111     11111112233445567


Q ss_pred             HHHHHHHcccccCCCCCCHHHHHHHHHhcc
Q 039505          306 AVEIAMASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       306 l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                      +.+++.+||+.+|++||||.||++.|+.+.
T Consensus       242 ~~~li~~cl~~dP~~RPs~~eil~~l~~~~  271 (317)
T d1xkka_         242 VYMIMVKCWMIDADSRPKFRELIIEFSKMA  271 (317)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCChhhCcCHHHHHHHHHHHH
Confidence            899999999999999999999999988764

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=9.1e-26  Score=203.88  Aligned_cols=163  Identities=15%  Similarity=0.137  Sum_probs=109.6

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-----c--------------EE-EeeCC---cEEE--
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-----P--------------IV-ECHVG---ALIT--  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-----~--------------Lv-~c~~~---~lv~--  211 (342)
                      ++|.  +.||+|+||+||+|++..+  .||||+++........     |              +. ++.++   ++|+  
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy   84 (271)
T d1nvra_           5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   84 (271)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEec
Confidence            4566  8999999999999998754  9999999765432211     1              33 33333   3333  


Q ss_pred             E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc--------c
Q 039505          212 I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH--------M  255 (342)
Q Consensus       212 m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~--------~  255 (342)
                      +                          +++||+|||+   .+|+||||||+|||++++  .++.+++....        .
T Consensus        85 ~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~---~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~  161 (271)
T d1nvra_          85 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL  161 (271)
T ss_dssp             CTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred             cCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---cCCccCcccHHHEEECCCCCEEEccchhheeeccCCcccc
Confidence            1                          9999999999   999999999999999987  44555443321        1


Q ss_pred             ccccccCcceee---------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHH
Q 039505          256 STTIAGTAGFLN---------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVE  308 (342)
Q Consensus       256 ~~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~  308 (342)
                      ....+||+.|||                           ||+.||.......  .... ..................+.+
T Consensus       162 ~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~--~~~~-~~~~~~~~~~~~~~~s~~~~~  238 (271)
T d1nvra_         162 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC--QEYS-DWKEKKTYLNPWKKIDSAPLA  238 (271)
T ss_dssp             BCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTS--HHHH-HHHTTCTTSTTGGGSCHHHHH
T ss_pred             ccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHH--HHHH-HHhcCCCCCCccccCCHHHHH
Confidence            234689999999                           9999997654332  1111 011111111112233456788


Q ss_pred             HHHHcccccCCCCCCHHHHHH
Q 039505          309 IAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       309 l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ++.+||+.||++|||+.|+++
T Consensus       239 li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         239 LLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             HHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHcCCChhHCcCHHHHhc
Confidence            999999999999999999865

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2e-25  Score=203.12  Aligned_cols=169  Identities=17%  Similarity=0.205  Sum_probs=115.7

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCCc---c--------------EE-EeeCC--cEEE--E----
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGHV---P--------------IV-ECHVG--ALIT--I----  212 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~~---~--------------Lv-~c~~~--~lv~--m----  212 (342)
                      +|.  +.||+|+||+||+|+++++ .||||+++........   +              ++ +|.++  ++|+  +    
T Consensus        18 ~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~lv~Ey~~~g~   97 (285)
T d1fmka3          18 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGS   97 (285)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCTTCB
T ss_pred             HEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcccCCHHHHHHHHHHHHhcccCCEeEEEEEEecCCeEEEEEecCCCc
Confidence            455  8899999999999999988 9999999765432111   1              44 66555  5555  2    


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-------ccccc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-------MSTTI  259 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-------~~~~~  259 (342)
                                              ||+||+|||+   .+|+||||||+|||||++  .++.+++....       .....
T Consensus        98 l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~---~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~  174 (285)
T d1fmka3          98 LLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA  174 (285)
T ss_dssp             HHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC-------------
T ss_pred             hhhhhhhcccccchHHHHHHHHHHHHHHHHHHhh---hheecccccceEEEECCCCcEEEcccchhhhccCCCceeeccc
Confidence                                    9999999999   899999999999999988  56665554321       12336


Q ss_pred             ccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHc
Q 039505          260 AGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMAS  313 (342)
Q Consensus       260 ~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~C  313 (342)
                      .||+.|+|                          ||..|+.......  .+..  .+......+.+..+..++.+++.+|
T Consensus       175 ~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~--~~~~--~i~~~~~~~~~~~~~~~l~~li~~c  250 (285)
T d1fmka3         175 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVLD--QVERGYRMPCPPECPESLHDLMCQC  250 (285)
T ss_dssp             -CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHH--HHHTTCCCCCCTTSCHHHHHHHHHH
T ss_pred             cccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHH--HHHH--HHHhcCCCCCCcccCHHHHHHHHHH
Confidence            78999998                          7555544332211  1111  1111112223344556789999999


Q ss_pred             ccccCCCCCCHHHHHHHHHhccCC
Q 039505          314 VSSKVNRRPLMNQVVMVREQGNGS  337 (342)
Q Consensus       314 l~~~P~~RPsm~eV~~~L~~i~~~  337 (342)
                      |+.+|++||||.+|+++|+..-.+
T Consensus       251 l~~dP~~Rps~~~i~~~L~~~~~~  274 (285)
T d1fmka3         251 WRKEPEERPTFEYLQAFLEDYFTS  274 (285)
T ss_dssp             TCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred             cccCHhHCcCHHHHHHHHhhhhcC
Confidence            999999999999999999986544

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.2e-25  Score=206.99  Aligned_cols=172  Identities=19%  Similarity=0.258  Sum_probs=114.5

Q ss_pred             hccCcccCcCCCeeEEEEEECCC-----eEEEEEccCCCCCCCcc-------------------EE-EeeC--C--cEEE
Q 039505          161 NNFERVPYKGGFITVYHGQLVKS-----EVAMKMLSPSSSQGHVP-------------------IV-ECHV--G--ALIT  211 (342)
Q Consensus       161 ~~f~~~lG~G~fG~Vykg~~~~~-----~vAVK~l~~~~~~~~~~-------------------Lv-~c~~--~--~lv~  211 (342)
                      -+|+++||+|+||+||+|++.++     .||||+++........+                   ++ +|..  +  ++|+
T Consensus        29 ~~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~  108 (311)
T d1r0pa_          29 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL  108 (311)
T ss_dssp             EEEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEE
T ss_pred             eccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEE
Confidence            35568999999999999998543     69999997543221111                   33 5543  2  4444


Q ss_pred             --E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------
Q 039505          212 --I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------  254 (342)
Q Consensus       212 --m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------  254 (342)
                        +                           +|+||.|||+   .+|+||||||+||||+++  +++.+++....      
T Consensus       109 E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~---~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~  185 (311)
T d1r0pa_         109 PYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF  185 (311)
T ss_dssp             ECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTC
T ss_pred             EEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcc---cCcccCCccHHhEeECCCCCEEEecccchhhcccccc
Confidence              2                           8999999999   999999999999999988  45554432211      


Q ss_pred             ----cccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHH
Q 039505          255 ----MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVG  304 (342)
Q Consensus       255 ----~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~  304 (342)
                          ......||+.|+|                          ||+.|+.......  .+.. .+... .....+..+..
T Consensus       186 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~--~~~~-~i~~g-~~~~~p~~~~~  261 (311)
T d1r0pa_         186 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITV-YLLQG-RRLLQPEYCPD  261 (311)
T ss_dssp             CCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC--------CHH-HHHTT-CCCCCCTTCCH
T ss_pred             ccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHH--HHHH-HHHcC-CCCCCcccCcH
Confidence                1223568999998                          8777765443222  1111 01110 01112233445


Q ss_pred             HHHHHHHHcccccCCCCCCHHHHHHHHHhccCCCC
Q 039505          305 KAVEIAMASVSSKVNRRPLMNQVVMVREQGNGSRI  339 (342)
Q Consensus       305 ~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~~~~  339 (342)
                      .+.+++.+||+.+|++||||.||++.|+++..+..
T Consensus       262 ~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~~~  296 (311)
T d1r0pa_         262 PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI  296 (311)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHhhh
Confidence            68899999999999999999999999999876543

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.91  E-value=4.1e-26  Score=209.15  Aligned_cols=170  Identities=18%  Similarity=0.184  Sum_probs=115.6

Q ss_pred             HhhccC--cccCcCCCeeEEEEEECC------C-eEEEEEccCCCCCCCcc-------------------EE-EeeCC--
Q 039505          159 VTNNFE--RVPYKGGFITVYHGQLVK------S-EVAMKMLSPSSSQGHVP-------------------IV-ECHVG--  207 (342)
Q Consensus       159 at~~f~--~~lG~G~fG~Vykg~~~~------~-~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~--  207 (342)
                      ..++|.  +.||+|+||+||+|++++      + .||||+++........+                   +. +|...  
T Consensus        11 p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~   90 (301)
T d1lufa_          11 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP   90 (301)
T ss_dssp             CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred             CHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCc
Confidence            456677  899999999999999753      2 89999997654322111                   23 33322  


Q ss_pred             -cEEE--E--------------------------------------------------ehhhhhhhhccCCCCeeeCCCC
Q 039505          208 -ALIT--I--------------------------------------------------PKEGLEYLHQGLKHPIIQRDMK  234 (342)
Q Consensus       208 -~lv~--m--------------------------------------------------ia~gL~yLH~~~~~~IiHrDlK  234 (342)
                       .+++  +                                                  +|+||+|||+   .+|||||||
T Consensus        91 ~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~---~~ivHrDlK  167 (301)
T d1lufa_          91 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLA  167 (301)
T ss_dssp             CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCS
T ss_pred             eEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhccc---CCeEeeEEc
Confidence             2222  1                                                  8999999999   999999999


Q ss_pred             cceEEecCC--CccccCCCCC--------ccccccccCcceee--------------------------cCC-CCccccc
Q 039505          235 STNILLNEK--SRISPVEGGT--------HMSTTIAGTAGFLN--------------------------TKN-PVISKSI  277 (342)
Q Consensus       235 p~NILLd~~--a~~~~~~~~~--------~~~~~~~Gt~~y~a--------------------------tG~-~P~~~~~  277 (342)
                      |+|||+|.+  +|+.+++...        .......||+.|+|                          ||. +|+....
T Consensus       168 p~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~  247 (301)
T d1lufa_         168 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA  247 (301)
T ss_dssp             GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred             ccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCC
Confidence            999999998  5666555431        11233678899998                          664 5666544


Q ss_pred             ccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccC
Q 039505          278 ENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNG  336 (342)
Q Consensus       278 ~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~  336 (342)
                      ...   +. ..+.+... .+.+...+.++.+++.+||+.+|++||||.||+++|+++.+
T Consensus       248 ~~e---~~-~~v~~~~~-~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~~  301 (301)
T d1lufa_         248 HEE---VI-YYVRDGNI-LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE  301 (301)
T ss_dssp             HHH---HH-HHHHTTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             HHH---HH-HHHHcCCC-CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence            322   11 11111111 12233445568999999999999999999999999999864

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.7e-25  Score=205.89  Aligned_cols=113  Identities=12%  Similarity=0.165  Sum_probs=81.8

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc--------cccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH--------MSTTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~--------~~~~~~Gt~~y~a---------------  267 (342)
                      +|+||+|||+   .+||||||||+|||++.+  .++.+++.+..        ......||+.|||               
T Consensus       173 i~~gl~yLH~---~~IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~Di  249 (325)
T d1rjba_         173 VAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDV  249 (325)
T ss_dssp             HHHHHHHHHH---TTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHH
T ss_pred             HHHHHHHHHh---CCeeeccCchhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceec
Confidence            8999999999   999999999999999988  45555443211        1224568999999               


Q ss_pred             -----------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHH
Q 039505          268 -----------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVRE  332 (342)
Q Consensus       268 -----------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~  332 (342)
                                 | |+.||.......  .+.  +++......+.+..+...+.+++.+||+.+|++||||.||++.|.
T Consensus       250 wS~Gvil~emlt~g~~Pf~~~~~~~--~~~--~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         250 WSYGILLWEIFSLGVNPYPGIPVDA--NFY--KLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             HHHHHHHHHHTTTSCCSSTTCCCSH--HHH--HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             cchhHHHHHHHhCCCCCCCCCCHHH--HHH--HHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence                       6 899997654322  111  112222222334445567899999999999999999999999985

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.2e-25  Score=202.24  Aligned_cols=160  Identities=24%  Similarity=0.340  Sum_probs=110.5

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCC---CCCC----cc--------------EE-EeeCC---cEEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSS---SQGH----VP--------------IV-ECHVG---ALIT  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~---~~~~----~~--------------Lv-~c~~~---~lv~  211 (342)
                      ++|.  +.||+|+||+||+|+.+.+  .||||++....   ....    +|              +. ++.+.   ++|+
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm   85 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   85 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence            3566  8999999999999999755  99999986431   1111    11              34 44443   3333


Q ss_pred             --E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc----ccc
Q 039505          212 --I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH----MST  257 (342)
Q Consensus       212 --m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~----~~~  257 (342)
                        +                          +++||+|||+   .+|+||||||+|||++.+  .++.+++....    ...
T Consensus        86 Ey~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~---~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~  162 (263)
T d2j4za1          86 EYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT  162 (263)
T ss_dssp             ECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCCE
T ss_pred             eecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeeeeccccceecCCCCEeecccceeeecCCCccc
Confidence              1                          9999999999   999999999999999987  55555544322    223


Q ss_pred             ccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHH
Q 039505          258 TIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAM  311 (342)
Q Consensus       258 ~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~  311 (342)
                      ...||+.|||                          ||+.||.......   +.. .+.....  ..+.....++.+++.
T Consensus       163 ~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~---~~~-~i~~~~~--~~p~~~s~~~~~li~  236 (263)
T d2j4za1         163 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE---TYK-RISRVEF--TFPDFVTEGARDLIS  236 (263)
T ss_dssp             ETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH---HHH-HHHTTCC--CCCTTSCHHHHHHHH
T ss_pred             ccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHH---HHH-HHHcCCC--CCCccCCHHHHHHHH
Confidence            4689999999                          9999997653221   111 1111111  122233456888999


Q ss_pred             HcccccCCCCCCHHHHHH
Q 039505          312 ASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       312 ~Cl~~~P~~RPsm~eV~~  329 (342)
                      +||+.||++|||+.|+++
T Consensus       237 ~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         237 RLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             HHTCSSGGGSCCHHHHHT
T ss_pred             HHccCCHhHCcCHHHHHc
Confidence            999999999999999985

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=3e-25  Score=200.66  Aligned_cols=167  Identities=16%  Similarity=0.121  Sum_probs=105.7

Q ss_pred             ccC--cccCcCCCeeEEEEEECC--C---eEEEEEccCCCCCCCcc---------------------EE-EeeCC--cEE
Q 039505          162 NFE--RVPYKGGFITVYHGQLVK--S---EVAMKMLSPSSSQGHVP---------------------IV-ECHVG--ALI  210 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~--~---~vAVK~l~~~~~~~~~~---------------------Lv-~c~~~--~lv  210 (342)
                      +|.  +.||+|+||+||+|++..  +   .||||+++.........                     ++ +|.++  .+|
T Consensus         9 d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~~~~lv   88 (273)
T d1u46a_           9 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMV   88 (273)
T ss_dssp             GEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEE
T ss_pred             HeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeecchhee
Confidence            455  889999999999998642  2   79999997654322221                     44 56554  444


Q ss_pred             E--E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-----
Q 039505          211 T--I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-----  254 (342)
Q Consensus       211 ~--m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-----  254 (342)
                      +  +                           +|+||.|||+   ++|+||||||+||||+.+  .++.+++....     
T Consensus        89 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~---~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~  165 (273)
T d1u46a_          89 TELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND  165 (273)
T ss_dssp             EECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-C
T ss_pred             eeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhh---CCEeeeeecHHHhccccccceeeccchhhhhcccCC
Confidence            4  2                           9999999999   999999999999999988  45555443321     


Q ss_pred             ----cccccccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHH
Q 039505          255 ----MSTTIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISV  303 (342)
Q Consensus       255 ----~~~~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~  303 (342)
                          ......|+..|+|                          | |+.||.......   +. ..+.......+.+...+
T Consensus       166 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~---~~-~~i~~~~~~~~~~~~~~  241 (273)
T d1u46a_         166 DHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ---IL-HKIDKEGERLPRPEDCP  241 (273)
T ss_dssp             CEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH---HH-HHHHTSCCCCCCCTTCC
T ss_pred             CcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHH---HH-HHHHhCCCCCCCccccc
Confidence                1123568889998                          7 899987654332   11 11111111122233344


Q ss_pred             HHHHHHHHHcccccCCCCCCHHHHHHHHHhcc
Q 039505          304 GKAVEIAMASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       304 ~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                      ..+.+++.+||+.+|++||||.||.+.|++.+
T Consensus       242 ~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~~  273 (273)
T d1u46a_         242 QDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ  273 (273)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHHHHHhcC
Confidence            56889999999999999999999999998753

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=4.5e-25  Score=201.75  Aligned_cols=117  Identities=14%  Similarity=0.125  Sum_probs=79.7

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCC--------ccccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGT--------HMSTTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~--------~~~~~~~Gt~~y~a---------------  267 (342)
                      +|+||+|||+   .+||||||||+||||+++  .|+.+++.+.        .......||+.|+|               
T Consensus       143 i~~gl~ylH~---~~ivHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDi  219 (299)
T d1ywna1         143 VAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV  219 (299)
T ss_dssp             HHHHHHHHHH---TTCCCSCCCGGGEEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHH
T ss_pred             HHHHHHHHHh---CCCcCCcCCccceeECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccce
Confidence            8999999999   999999999999999987  5565554331        12234679999999               


Q ss_pred             -----------cC-CCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhcc
Q 039505          268 -----------TK-NPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       268 -----------tG-~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                                 || ++|+.......  .+..  .+........+.....++.+++.+||+.+|++||||.||++.|+.+-
T Consensus       220 wS~Gvil~ellt~~~~p~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~il  295 (299)
T d1ywna1         220 WSFGVLLWEIFSLGASPYPGVKIDE--EFCR--RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL  295 (299)
T ss_dssp             HHHHHHHHHHHTTSCCSSTTCCCSH--HHHH--HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             eehHHHHHHHHhCCCCCCCCCCHHH--HHHH--HHhcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence                       65 45665443221  1111  11111111223334456889999999999999999999999999874


Q ss_pred             C
Q 039505          336 G  336 (342)
Q Consensus       336 ~  336 (342)
                      +
T Consensus       296 q  296 (299)
T d1ywna1         296 Q  296 (299)
T ss_dssp             H
T ss_pred             h
Confidence            3

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=4.5e-25  Score=198.36  Aligned_cols=164  Identities=16%  Similarity=0.152  Sum_probs=112.2

Q ss_pred             cccCcCCCeeEEEEEECCCeEEEEEccCCCCCCC--cc--------------EE-EeeCC----cEEE--E---------
Q 039505          165 RVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGH--VP--------------IV-ECHVG----ALIT--I---------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~~vAVK~l~~~~~~~~--~~--------------Lv-~c~~~----~lv~--m---------  212 (342)
                      +.||+|+||.||+|++++..||||+++.......  +|              ++ +|.+.    ++|+  +         
T Consensus        13 ~~lG~G~fg~Vy~~~~~~~~vAvK~i~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~~g~L~~~l   92 (262)
T d1byga_          13 QTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL   92 (262)
T ss_dssp             EEEEECSSCEEEEEEETTEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHH
T ss_pred             EEEecCCCeEEEEEEECCeEEEEEEECcHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEeccCCCCHHHHH
Confidence            8899999999999999766999999976432210  11              55 66432    5565  2         


Q ss_pred             -------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc---cccccccCcceee-
Q 039505          213 -------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH---MSTTIAGTAGFLN-  267 (342)
Q Consensus       213 -------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~---~~~~~~Gt~~y~a-  267 (342)
                                         ||+||.|||+   .+|+||||||+|||++.+  .++.+++....   ......+|..|+| 
T Consensus        93 ~~~~~~~l~~~~~~~i~~~i~~al~ylH~---~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~~~~~~~y~aP  169 (262)
T d1byga_          93 RSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAP  169 (262)
T ss_dssp             HHHHHHHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC------------CCTTTSCH
T ss_pred             HhcCCCCCCHHHHHHHHHHHHhhcccccc---CceeccccchHhheecCCCCEeecccccceecCCCCccccccccCCCh
Confidence                               9999999999   999999999999999988  34444433322   2233678889998 


Q ss_pred             -------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCC
Q 039505          268 -------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRR  321 (342)
Q Consensus       268 -------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~R  321 (342)
                                               | |+.|+.......   +..  .+......+.+.....++.+++.+||+.||++|
T Consensus       170 E~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~---~~~--~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~R  244 (262)
T d1byga_         170 EALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVP--RVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMR  244 (262)
T ss_dssp             HHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG---HHH--HHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             HHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHH---HHH--HHHcCCCCCCCccCCHHHHHHHHHHcccCHhHC
Confidence                                     7 677776543322   111  111111222333444568899999999999999


Q ss_pred             CCHHHHHHHHHhccC
Q 039505          322 PLMNQVVMVREQGNG  336 (342)
Q Consensus       322 Psm~eV~~~L~~i~~  336 (342)
                      |||.+++++|++++.
T Consensus       245 ps~~~l~~~L~~i~~  259 (262)
T d1byga_         245 PSFLQLREQLEHIKT  259 (262)
T ss_dssp             CCHHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHh
Confidence            999999999998864

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.2e-25  Score=201.44  Aligned_cols=164  Identities=13%  Similarity=0.096  Sum_probs=111.7

Q ss_pred             cccCcCCCeeEEEEEECCC-----eEEEEEccCCCCCCCcc-------------------EE-EeeCC--cEEE--E---
Q 039505          165 RVPYKGGFITVYHGQLVKS-----EVAMKMLSPSSSQGHVP-------------------IV-ECHVG--ALIT--I---  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~-----~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~--~lv~--m---  212 (342)
                      +.||+|+||+||+|++...     .||||+++........+                   ++ +|.++  ++|+  +   
T Consensus        13 ~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~iv~E~~~~g   92 (273)
T d1mp8a_          13 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLG   92 (273)
T ss_dssp             EEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEEEEECCTTE
T ss_pred             EEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCeEEEEEEeccCC
Confidence            8999999999999998542     68999986544332211                   55 66555  4444  2   


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-------ccccc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-------MSTTI  259 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-------~~~~~  259 (342)
                                              +++||+|||+   .+||||||||+|||++++  .|+.+++....       .....
T Consensus        93 ~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~---~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~~~~~~~  169 (273)
T d1mp8a_          93 ELRSFLQVRKYSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG  169 (273)
T ss_dssp             EHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC------------------
T ss_pred             cHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcc---cCeeccccchhheeecCCCcEEEccchhheeccCCcceeccce
Confidence                                    8999999999   999999999999999988  45555443221       22346


Q ss_pred             ccCcceee--------------------------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHH
Q 039505          260 AGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMA  312 (342)
Q Consensus       260 ~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~  312 (342)
                      .||+.|+|                          | |++|+.......   +.. .+.+. ...+.+...+..+.+++.+
T Consensus       170 ~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~---~~~-~i~~~-~~~~~~~~~~~~~~~li~~  244 (273)
T d1mp8a_         170 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND---VIG-RIENG-ERLPMPPNCPPTLYSLMTK  244 (273)
T ss_dssp             -CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHH-HHHTT-CCCCCCTTCCHHHHHHHHH
T ss_pred             ecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHH---HHH-HHHcC-CCCCCCCCCCHHHHHHHHH
Confidence            78999998                          5 899988654332   111 11111 1112233445668999999


Q ss_pred             cccccCCCCCCHHHHHHHHHhccC
Q 039505          313 SVSSKVNRRPLMNQVVMVREQGNG  336 (342)
Q Consensus       313 Cl~~~P~~RPsm~eV~~~L~~i~~  336 (342)
                      ||+.+|++|||+.||++.|+.+.+
T Consensus       245 cl~~dp~~Rps~~ei~~~L~~i~~  268 (273)
T d1mp8a_         245 CWAYDPSRRPRFTELKAQLSTILE  268 (273)
T ss_dssp             HTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HcCCCHhHCcCHHHHHHHHHHHHH
Confidence            999999999999999999988743

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.91  E-value=2e-25  Score=205.36  Aligned_cols=159  Identities=22%  Similarity=0.260  Sum_probs=110.0

Q ss_pred             cC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-------c--------------EE-EeeCC---cEEE--
Q 039505          163 FE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-------P--------------IV-ECHVG---ALIT--  211 (342)
Q Consensus       163 f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-------~--------------Lv-~c~~~---~lv~--  211 (342)
                      |+  +.||+|+||+||+|+...+  .||||+++........       |              ++ ++...   ++|+  
T Consensus        17 y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E~   96 (309)
T d1u5ra_          17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY   96 (309)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEEe
Confidence            55  8899999999999998755  8999999765433211       1              33 43333   3443  


Q ss_pred             E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc--ccccccc
Q 039505          212 I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH--MSTTIAG  261 (342)
Q Consensus       212 m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~--~~~~~~G  261 (342)
                      +                          +++||+|||+   .+||||||||+|||++++  .++.+++....  ......|
T Consensus        97 ~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~---~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~G  173 (309)
T d1u5ra_          97 CLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVG  173 (309)
T ss_dssp             CSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCS
T ss_pred             cCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEECCCCCEEEeecccccccCCCCcccc
Confidence            1                          9999999999   999999999999999988  55555554432  2344789


Q ss_pred             Ccceee-----------------------------cCCCCcccccccccccccc-cccccccCCCCCChHHHHHHHHHHH
Q 039505          262 TAGFLN-----------------------------TKNPVISKSIENGNSHLRD-KSTVDLSFKGEFDIISVGKAVEIAM  311 (342)
Q Consensus       262 t~~y~a-----------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~l~~~~~~~~~~~l~~l~~  311 (342)
                      |+.|||                             ||+.||.......  .+.. .....+.+   .+......+.+++.
T Consensus       174 T~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~--~~~~i~~~~~~~~---~~~~~s~~~~~li~  248 (309)
T d1u5ra_         174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS--ALYHIAQNESPAL---QSGHWSEYFRNFVD  248 (309)
T ss_dssp             CGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHSCCCCC---SCTTSCHHHHHHHH
T ss_pred             CccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHH--HHHHHHhCCCCCC---CCCCCCHHHHHHHH
Confidence            999999                             7888876543221  1111 00111111   12223456889999


Q ss_pred             HcccccCCCCCCHHHHHH
Q 039505          312 ASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       312 ~Cl~~~P~~RPsm~eV~~  329 (342)
                      +||+.||++|||+.|+++
T Consensus       249 ~~L~~dP~~Rpt~~ell~  266 (309)
T d1u5ra_         249 SCLQKIPQDRPTSEVLLK  266 (309)
T ss_dssp             HHTCSSGGGSCCHHHHTT
T ss_pred             HHCcCChhHCcCHHHHHh
Confidence            999999999999999874

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=5.2e-25  Score=202.00  Aligned_cols=173  Identities=18%  Similarity=0.196  Sum_probs=114.9

Q ss_pred             cccCcCCCeeEEEEEECCCeEEEEEccCCCCCCC-cc----------------EE-EeeCC-------cEEE--E-----
Q 039505          165 RVPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGH-VP----------------IV-ECHVG-------ALIT--I-----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~~vAVK~l~~~~~~~~-~~----------------Lv-~c~~~-------~lv~--m-----  212 (342)
                      +.||+|+||+||+|++.+..||||+++....... .+                ++ +|...       ++|+  +     
T Consensus         9 ~~iG~G~fg~Vy~~~~~g~~vAvK~~~~~~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~g~L   88 (303)
T d1vjya_           9 ESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSL   88 (303)
T ss_dssp             EEEECCSSSEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBH
T ss_pred             EEEeeCCCeEEEEEEECCEEEEEEEECccchhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEecccCCCH
Confidence            7899999999999998655999999865432110 00                44 55432       3343  2     


Q ss_pred             --------------------ehhhhhhhhccC-----CCCeeeCCCCcceEEecCC--CccccCCCCCc----------c
Q 039505          213 --------------------PKEGLEYLHQGL-----KHPIIQRDMKSTNILLNEK--SRISPVEGGTH----------M  255 (342)
Q Consensus       213 --------------------ia~gL~yLH~~~-----~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~----------~  255 (342)
                                          +|.||+|||+..     .++||||||||+||||+++  +++.+++....          .
T Consensus        89 ~~~l~~~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~~~~~~~~~  168 (303)
T d1vjya_          89 FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIA  168 (303)
T ss_dssp             HHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEECC-
T ss_pred             HHHHhcCCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccccccCCCcceecc
Confidence                                999999999731     3699999999999999988  55555543211          1


Q ss_pred             ccccccCcceee--------------------------------cCCCCcccccccc--cccccc-------------cc
Q 039505          256 STTIAGTAGFLN--------------------------------TKNPVISKSIENG--NSHLRD-------------KS  288 (342)
Q Consensus       256 ~~~~~Gt~~y~a--------------------------------tG~~P~~~~~~~~--~~~l~~-------------~~  288 (342)
                      .....||++|+|                                ||..|+.......  ......             .+
T Consensus       169 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (303)
T d1vjya_         169 PNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQ  248 (303)
T ss_dssp             ---CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTS
T ss_pred             ccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHHHHhcc
Confidence            233679999999                                7777664432111  000000             12


Q ss_pred             cccccCCCCC-ChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccCC
Q 039505          289 TVDLSFKGEF-DIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNGS  337 (342)
Q Consensus       289 ~~d~~l~~~~-~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~~  337 (342)
                      ..+|.+.... ..+.+..+.+++.+||+.||++||||.||++.|+++.+.
T Consensus       249 ~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~  298 (303)
T d1vjya_         249 KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             CCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHh
Confidence            2233332221 234567799999999999999999999999999988653

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=5.3e-25  Score=201.50  Aligned_cols=115  Identities=16%  Similarity=0.144  Sum_probs=82.3

Q ss_pred             ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc--------cccccccCcceee---------------
Q 039505          213 PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH--------MSTTIAGTAGFLN---------------  267 (342)
Q Consensus       213 ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~--------~~~~~~Gt~~y~a---------------  267 (342)
                      +|+||+|||+   .+||||||||+|||++.+  .++.+++....        ......||+.|+|               
T Consensus       144 i~~al~ylH~---~~ivHrDiKp~NiLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~Di  220 (299)
T d1fgka_         144 VARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV  220 (299)
T ss_dssp             HHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHH
T ss_pred             HHHHHHHhhh---CCEEeeeecccceeecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhh
Confidence            8999999999   999999999999999988  45555443321        1233678899998               


Q ss_pred             -----------c-CCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhcc
Q 039505          268 -----------T-KNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGN  335 (342)
Q Consensus       268 -----------t-G~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~  335 (342)
                                 | |++|+.......   +.  +.+......+.+......+.+++.+||+.+|++||||.||++.|+++-
T Consensus       221 wS~Gvvl~ell~~g~~p~~~~~~~~---~~--~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~  295 (299)
T d1fgka_         221 WSFGVLLWEIFTLGGSPYPGVPVEE---LF--KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV  295 (299)
T ss_dssp             HHHHHHHHHHHTTSCCSSTTCCHHH---HH--HHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHhHHHHHHhccCCCCCCCCCCHHH---HH--HHHHcCCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHh
Confidence                       6 688876544322   11  111111122223344556899999999999999999999999999874

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.1e-24  Score=198.79  Aligned_cols=162  Identities=19%  Similarity=0.198  Sum_probs=110.4

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc------------------EE-EeeCC---cEEE--E-
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP------------------IV-ECHVG---ALIT--I-  212 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~------------------Lv-~c~~~---~lv~--m-  212 (342)
                      .|.  +.||+|+||+||+|+...+  .||||+++.......+.                  ++ ++...   ++|+  + 
T Consensus        21 ~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~  100 (293)
T d1yhwa1          21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA  100 (293)
T ss_dssp             TBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             ccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEecC
Confidence            355  8899999999999998654  99999997654332221                  33 33332   3333  1 


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------cccccc
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTIA  260 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~~  260 (342)
                                              ++.||+|||+   .+|+||||||+|||++.+  .++.+++....      .....+
T Consensus       101 gg~L~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~---~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~  177 (293)
T d1yhwa1         101 GGSLTDVVTETCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV  177 (293)
T ss_dssp             TCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCC
T ss_pred             CCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCcHHHeEECCCCcEeeccchhheeeccccccccccc
Confidence                                    9999999999   999999999999999988  44555443321      223467


Q ss_pred             cCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHHcc
Q 039505          261 GTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMASV  314 (342)
Q Consensus       261 Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl  314 (342)
                      ||+.|+|                          ||+.||.......  .+.. ...........+......+.+++.+||
T Consensus       178 gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~--~~~~-~~~~~~~~~~~~~~~s~~~~~li~~~L  254 (293)
T d1yhwa1         178 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR--ALYL-IATNGTPELQNPEKLSAIFRDFLNRCL  254 (293)
T ss_dssp             SCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHH-HHHHCSCCCSSGGGSCHHHHHHHHHHT
T ss_pred             cCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHH--HHHH-HHhCCCCCCCCcccCCHHHHHHHHHHc
Confidence            9999999                          9999997643221  1111 000001111123334556889999999


Q ss_pred             cccCCCCCCHHHHHH
Q 039505          315 SSKVNRRPLMNQVVM  329 (342)
Q Consensus       315 ~~~P~~RPsm~eV~~  329 (342)
                      +.||++|||+.|+++
T Consensus       255 ~~dP~~R~s~~eil~  269 (293)
T d1yhwa1         255 DMDVEKRGSAKELLQ  269 (293)
T ss_dssp             CSSTTTSCCHHHHTT
T ss_pred             cCChhHCcCHHHHhc
Confidence            999999999999975

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.1e-24  Score=201.46  Aligned_cols=174  Identities=16%  Similarity=0.186  Sum_probs=112.8

Q ss_pred             hhccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc-------------------EE-EeeCC---cEEE-
Q 039505          160 TNNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP-------------------IV-ECHVG---ALIT-  211 (342)
Q Consensus       160 t~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~-------------------Lv-~c~~~---~lv~-  211 (342)
                      .++|+  +.||+|+||+||+|+...+  .||||+++.........                   ++ +|...   ++|+ 
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmE   84 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   84 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence            46787  8999999999999998754  99999997654332211                   44 44444   4444 


Q ss_pred             -E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc----cccc
Q 039505          212 -I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH----MSTT  258 (342)
Q Consensus       212 -m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~----~~~~  258 (342)
                       +                          +++||+|||+.  .+|+||||||+|||++++  .++.+++.+..    ....
T Consensus        85 y~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~--~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~  162 (322)
T d1s9ja_          85 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS  162 (322)
T ss_dssp             CCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHH--HCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC--
T ss_pred             cCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHh--CCEEccccCHHHeeECCCCCEEEeeCCCccccCCCcccc
Confidence             2                          89999999971  389999999999999988  44555444322    2244


Q ss_pred             cccCcceee--------------------------cCCCCcccccccccccccc----------------------cccc
Q 039505          259 IAGTAGFLN--------------------------TKNPVISKSIENGNSHLRD----------------------KSTV  290 (342)
Q Consensus       259 ~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~----------------------~~~~  290 (342)
                      .+||++|+|                          ||+.||.............                      ....
T Consensus       163 ~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (322)
T d1s9ja_         163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGM  242 (322)
T ss_dssp             -CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC---------------------------
T ss_pred             ccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccccccccccc
Confidence            789999999                          9999997643221000000                      0000


Q ss_pred             cc---------------cCCCCCC-hHHHHHHHHHHHHcccccCCCCCCHHHHHH--HHHhcc
Q 039505          291 DL---------------SFKGEFD-IISVGKAVEIAMASVSSKVNRRPLMNQVVM--VREQGN  335 (342)
Q Consensus       291 d~---------------~l~~~~~-~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~--~L~~i~  335 (342)
                      +.               ......+ .....++.+++.+||+.||++|||+.|+++  .+++..
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~~~  305 (322)
T d1s9ja_         243 DSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD  305 (322)
T ss_dssp             ---CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHHH
T ss_pred             ccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCcCC
Confidence            00               0000000 112345888999999999999999999986  355443

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.90  E-value=6e-25  Score=198.85  Aligned_cols=169  Identities=15%  Similarity=0.209  Sum_probs=107.9

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc---------------------EE-EeeC-C------
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP---------------------IV-ECHV-G------  207 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~---------------------Lv-~c~~-~------  207 (342)
                      +.|.  +.||+|+||+||+|+...+  .||||+++.........                     ++ ++.. .      
T Consensus         7 drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~   86 (277)
T d1o6ya_           7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP   86 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred             ceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceE
Confidence            3455  8999999999999998654  99999998754433211                     33 2221 1      


Q ss_pred             cEEE--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCC----
Q 039505          208 ALIT--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGT----  253 (342)
Q Consensus       208 ~lv~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~----  253 (342)
                      ++|+  +                          +++||+|||+   .+|+||||||+|||++.+  .++.+++...    
T Consensus        87 ~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~---~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~  163 (277)
T d1o6ya_          87 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIAD  163 (277)
T ss_dssp             EEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTSCEEECCCTTCEECC-
T ss_pred             EEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCccCccccCcccccCccccceeehhhhhhhhcc
Confidence            2333  1                          9999999999   999999999999999987  2333322211    


Q ss_pred             -----ccccccccCcceee--------------------------cCCCCcccccccc-cccccccccccccCCCCCChH
Q 039505          254 -----HMSTTIAGTAGFLN--------------------------TKNPVISKSIENG-NSHLRDKSTVDLSFKGEFDII  301 (342)
Q Consensus       254 -----~~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~-~~~l~~~~~~d~~l~~~~~~~  301 (342)
                           ......+||+.|+|                          ||+.||....... ....+......+.   .....
T Consensus       164 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~---~~~~~  240 (277)
T d1o6ya_         164 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS---ARHEG  240 (277)
T ss_dssp             ---------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGG---GTSSS
T ss_pred             ccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCc---hhccC
Confidence                 12234679999999                          9999997654322 0001111111111   11222


Q ss_pred             HHHHHHHHHHHcccccCCCCC-CHHHHHHHHHhcc
Q 039505          302 SVGKAVEIAMASVSSKVNRRP-LMNQVVMVREQGN  335 (342)
Q Consensus       302 ~~~~l~~l~~~Cl~~~P~~RP-sm~eV~~~L~~i~  335 (342)
                      .+.++.+++.+||+.||++|| |+.++.+.|.+++
T Consensus       241 ~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~  275 (277)
T d1o6ya_         241 LSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH  275 (277)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence            345588899999999999999 8999999998775

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.1e-24  Score=198.53  Aligned_cols=158  Identities=17%  Similarity=0.166  Sum_probs=110.3

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc------------------EE-EeeCC---cEEE--E------
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP------------------IV-ECHVG---ALIT--I------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~------------------Lv-~c~~~---~lv~--m------  212 (342)
                      +.||+|+||+||+|++..+  .||||+++.......+.                  ++ ++...   ++|+  +      
T Consensus        18 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~~g~L~   97 (288)
T d2jfla1          18 GELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVD   97 (288)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHH
T ss_pred             EEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecCCCCcHH
Confidence            7899999999999998755  89999997654333222                  33 33333   3443  1      


Q ss_pred             ---------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc------ccccccCc
Q 039505          213 ---------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM------STTIAGTA  263 (342)
Q Consensus       213 ---------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~------~~~~~Gt~  263 (342)
                                           +++||+|||+   .+|+||||||+|||++.+  .++.+++.....      .....||+
T Consensus        98 ~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~---~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~~~~Gt~  174 (288)
T d2jfla1          98 AVMLELERPLTESQIQVVCKQTLDALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTP  174 (288)
T ss_dssp             HHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHTCCCSCC
T ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCEEEeecChhheeECCCCCEEEEechhhhccCCCccccccccccc
Confidence                                 9999999999   999999999999999988  455555543221      23468999


Q ss_pred             ceee-------------------------------cCCCCcccccccccccccccccccccC-CCCCChHHHHHHHHHHH
Q 039505          264 GFLN-------------------------------TKNPVISKSIENGNSHLRDKSTVDLSF-KGEFDIISVGKAVEIAM  311 (342)
Q Consensus       264 ~y~a-------------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l-~~~~~~~~~~~l~~l~~  311 (342)
                      .|+|                               ||+.||.......  .+..  +..... ....+......+.+++.
T Consensus       175 ~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~--~~~~--i~~~~~~~~~~~~~~s~~~~~li~  250 (288)
T d2jfla1         175 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMR--VLLK--IAKSEPPTLAQPSRWSSNFKDFLK  250 (288)
T ss_dssp             TTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGG--HHHH--HHHSCCCCCSSGGGSCHHHHHHHH
T ss_pred             ccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHH--HHHH--HHcCCCCCCCccccCCHHHHHHHH
Confidence            9998                               8888887653322  1111  111000 11122344566889999


Q ss_pred             HcccccCCCCCCHHHHHH
Q 039505          312 ASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       312 ~Cl~~~P~~RPsm~eV~~  329 (342)
                      +||+.||++|||+.|+++
T Consensus       251 ~~L~~dp~~R~t~~ell~  268 (288)
T d2jfla1         251 KCLEKNVDARWTTSQLLQ  268 (288)
T ss_dssp             HHSCSSTTTSCCHHHHTT
T ss_pred             HHccCChhHCcCHHHHhc
Confidence            999999999999999975

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.4e-24  Score=199.76  Aligned_cols=163  Identities=19%  Similarity=0.267  Sum_probs=109.8

Q ss_pred             cccCcCCCeeEEEEEECC------C-eEEEEEccCCCCCCCcc--------------------EE-EeeCC---cEEE--
Q 039505          165 RVPYKGGFITVYHGQLVK------S-EVAMKMLSPSSSQGHVP--------------------IV-ECHVG---ALIT--  211 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~------~-~vAVK~l~~~~~~~~~~--------------------Lv-~c~~~---~lv~--  211 (342)
                      +.||+|+||.||+|++..      + .||||+++.........                    +. +|...   ++++  
T Consensus        29 ~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~~lvmE~  108 (311)
T d1t46a_          29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEY  108 (311)
T ss_dssp             EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             eEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEEEEEEEc
Confidence            899999999999998732      2 89999997654322111                    23 44333   2332  


Q ss_pred             E--------------------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--Cc
Q 039505          212 I--------------------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SR  245 (342)
Q Consensus       212 m--------------------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~  245 (342)
                      +                                            ||+||+|||+   ++||||||||+|||++.+  .+
T Consensus       109 ~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~---~~ivHrDLKp~NIl~~~~~~~k  185 (311)
T d1t46a_         109 CCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITK  185 (311)
T ss_dssp             CTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEETTTEEE
T ss_pred             CCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccccccccccccCccc
Confidence            1                                            9999999999   999999999999999987  33


Q ss_pred             cccCCC--------CCccccccccCcceee--------------------------c-CCCCcccccccccccccccccc
Q 039505          246 ISPVEG--------GTHMSTTIAGTAGFLN--------------------------T-KNPVISKSIENGNSHLRDKSTV  290 (342)
Q Consensus       246 ~~~~~~--------~~~~~~~~~Gt~~y~a--------------------------t-G~~P~~~~~~~~~~~l~~~~~~  290 (342)
                      +.+++.        .........||+.|+|                          | |++|+.......  .+  .+++
T Consensus       186 i~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~--~~--~~~i  261 (311)
T d1t46a_         186 ICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS--KF--YKMI  261 (311)
T ss_dssp             ECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH--HH--HHHH
T ss_pred             ccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHH--HH--HHHH
Confidence            333221        1122344689999998                          6 555555443221  11  1122


Q ss_pred             cccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhc
Q 039505          291 DLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQG  334 (342)
Q Consensus       291 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i  334 (342)
                      +.......+......+.+++.+||+.+|++||||.||+++|+++
T Consensus       262 ~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~  305 (311)
T d1t46a_         262 KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ  305 (311)
T ss_dssp             HHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             hcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence            22222222333456689999999999999999999999999864

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=5.7e-25  Score=198.40  Aligned_cols=164  Identities=15%  Similarity=0.171  Sum_probs=100.5

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc------c--------------EE-EeeCC-----cEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV------P--------------IV-ECHVG-----ALI  210 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~------~--------------Lv-~c~~~-----~lv  210 (342)
                      ++|.  +.||+|+||+||+|+...+  .||||+++........      |              ++ ++.+.     ++|
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv   83 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   83 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence            4676  8999999999999998754  8999999765432111      1              33 34321     333


Q ss_pred             E--E------------------------------ehhhhhhhhccC--CCCeeeCCCCcceEEecCCC--ccccCCCC--
Q 039505          211 T--I------------------------------PKEGLEYLHQGL--KHPIIQRDMKSTNILLNEKS--RISPVEGG--  252 (342)
Q Consensus       211 ~--m------------------------------ia~gL~yLH~~~--~~~IiHrDlKp~NILLd~~a--~~~~~~~~--  252 (342)
                      +  +                              +++||+|||+..  ..+||||||||+|||++++.  ++.+++..  
T Consensus        84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~  163 (269)
T d2java1          84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI  163 (269)
T ss_dssp             EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHH
T ss_pred             EecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceee
Confidence            3  1                              899999999832  23599999999999999883  34333211  


Q ss_pred             ----CccccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHH
Q 039505          253 ----THMSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIIS  302 (342)
Q Consensus       253 ----~~~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~  302 (342)
                          ........||++|||                          ||+.||.......   +. ..+.+... ...+...
T Consensus       164 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~---~~-~~i~~~~~-~~~~~~~  238 (269)
T d2java1         164 LNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE---LA-GKIREGKF-RRIPYRY  238 (269)
T ss_dssp             C-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HH-HHHHHTCC-CCCCTTS
T ss_pred             cccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHH---HH-HHHHcCCC-CCCCccc
Confidence                112344789999999                          9999997654322   11 11111111 1122333


Q ss_pred             HHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          303 VGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       303 ~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ..++.+++.+||+.||++|||+.|+++
T Consensus       239 s~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         239 SDELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            456889999999999999999999874

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.1e-24  Score=200.32  Aligned_cols=164  Identities=15%  Similarity=0.169  Sum_probs=113.0

Q ss_pred             cccCcCCCeeEEEEEECC------C-eEEEEEccCCCCCCCc-----c--------------EE-EeeCC---cEEE--E
Q 039505          165 RVPYKGGFITVYHGQLVK------S-EVAMKMLSPSSSQGHV-----P--------------IV-ECHVG---ALIT--I  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~------~-~vAVK~l~~~~~~~~~-----~--------------Lv-~c~~~---~lv~--m  212 (342)
                      +.||+|+||+||+|.+..      + .||||+++........     +              +. .|...   .+|+  +
T Consensus        26 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~  105 (308)
T d1p4oa_          26 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELM  105 (308)
T ss_dssp             EEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             eEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCceeEEEeec
Confidence            889999999999998742      2 8999999754322211     1              33 44333   4444  1


Q ss_pred             ------------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc
Q 039505          213 ------------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH  254 (342)
Q Consensus       213 ------------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~  254 (342)
                                                          +|+||.|||+   .+|+||||||+|||+|++  +++.+++....
T Consensus       106 ~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~---~~ivHrDlk~~NiLld~~~~~Kl~DFGla~~  182 (308)
T d1p4oa_         106 TRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRD  182 (308)
T ss_dssp             TTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEECTTCCEEECCTTCCCG
T ss_pred             CCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhh---CCeeeceEcCCceeecCCceEEEeeccccee
Confidence                                                8999999999   899999999999999998  55555554321


Q ss_pred             --------cccccccCcceee--------------------------cC-CCCcccccccccccccccccccccCCCCCC
Q 039505          255 --------MSTTIAGTAGFLN--------------------------TK-NPVISKSIENGNSHLRDKSTVDLSFKGEFD  299 (342)
Q Consensus       255 --------~~~~~~Gt~~y~a--------------------------tG-~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~  299 (342)
                              ......||+.|+|                          || ++|+.......   +. ..+.+... .+.+
T Consensus       183 ~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~---~~-~~i~~~~~-~~~p  257 (308)
T d1p4oa_         183 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ---VL-RFVMEGGL-LDKP  257 (308)
T ss_dssp             GGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHH---HH-HHHHTTCC-CCCC
T ss_pred             ccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHH---HH-HHHHhCCC-CCCc
Confidence                    1233468999999                          66 46665443221   11 11122111 1223


Q ss_pred             hHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccC
Q 039505          300 IISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNG  336 (342)
Q Consensus       300 ~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~  336 (342)
                      ..+...+.+++.+||+.+|++||||.+|++.|++..+
T Consensus       258 ~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~  294 (308)
T d1p4oa_         258 DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  294 (308)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence            3445669999999999999999999999999988654

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.3e-24  Score=196.17  Aligned_cols=159  Identities=22%  Similarity=0.307  Sum_probs=105.9

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC------cc--------------EE-EeeC----C---cEEE--E
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH------VP--------------IV-ECHV----G---ALIT--I  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~------~~--------------Lv-~c~~----~---~lv~--m  212 (342)
                      +.||+|+||+||+|++..+  .||||++........      +|              ++ ++..    .   ++|+  +
T Consensus        15 ~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivmE~~   94 (270)
T d1t4ha_          15 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELM   94 (270)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECC
T ss_pred             eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEEeCC
Confidence            6899999999999998765  899999875432211      11              33 3321    1   3333  1


Q ss_pred             --------------------------ehhhhhhhhccCCCC--eeeCCCCcceEEecC-C--CccccCCCCCc----ccc
Q 039505          213 --------------------------PKEGLEYLHQGLKHP--IIQRDMKSTNILLNE-K--SRISPVEGGTH----MST  257 (342)
Q Consensus       213 --------------------------ia~gL~yLH~~~~~~--IiHrDlKp~NILLd~-~--a~~~~~~~~~~----~~~  257 (342)
                                                +++||+|||+   .+  |+||||||+|||+++ +  .++.+++....    ...
T Consensus        95 ~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~---~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~~~~  171 (270)
T d1t4ha_          95 TSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK  171 (270)
T ss_dssp             CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBE
T ss_pred             CCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHH---CCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccCCccC
Confidence                                      8999999998   55  999999999999975 4  45555543321    223


Q ss_pred             ccccCcceee-------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHH
Q 039505          258 TIAGTAGFLN-------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMA  312 (342)
Q Consensus       258 ~~~Gt~~y~a-------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~  312 (342)
                      ..+||+.|||                         ||+.||.......  .+.. .+.........+.....++.+++.+
T Consensus       172 ~~~GT~~Y~aPE~~~~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~--~~~~-~i~~~~~~~~~~~~~~~~~~~li~~  248 (270)
T d1t4ha_         172 AVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAA--QIYR-RVTSGVKPASFDKVAIPEVKEIIEG  248 (270)
T ss_dssp             ESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH--HHHH-HHTTTCCCGGGGGCCCHHHHHHHHH
T ss_pred             CcccCccccCHHHhCCCCCCcCchhhHHHHHHHHHHCCCCCCCcccHH--HHHH-HHHcCCCCcccCccCCHHHHHHHHH
Confidence            4689999999                         9999997543221  1111 1111111111122233458899999


Q ss_pred             cccccCCCCCCHHHHHH
Q 039505          313 SVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       313 Cl~~~P~~RPsm~eV~~  329 (342)
                      ||+.+|++|||+.|+++
T Consensus       249 ~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         249 CIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             HSCSSGGGSCCHHHHHT
T ss_pred             HccCCHhHCcCHHHHhC
Confidence            99999999999999975

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.9e-24  Score=198.76  Aligned_cols=169  Identities=18%  Similarity=0.238  Sum_probs=110.6

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC----eEEEEEccCCCCCCCcc--------------------EE-EeeCC---cEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS----EVAMKMLSPSSSQGHVP--------------------IV-ECHVG---ALI  210 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~----~vAVK~l~~~~~~~~~~--------------------Lv-~c~~~---~lv  210 (342)
                      ++|.  ++||+|+||+||+|++.++    .||||+++........+                    ++ +|..+   ++|
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV   89 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   89 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence            3454  8999999999999998654    58899886543222111                    33 34333   333


Q ss_pred             E--E------------------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--C
Q 039505          211 T--I------------------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--S  244 (342)
Q Consensus       211 ~--m------------------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a  244 (342)
                      +  +                                          ||+||.|||+   .+|+||||||+|||++.+  .
T Consensus        90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~---~~iiHrDlkp~NIL~~~~~~~  166 (309)
T d1fvra_          90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVA  166 (309)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCE
T ss_pred             EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhc---CCccccccccceEEEcCCCce
Confidence            3  1                                          8999999999   999999999999999988  5


Q ss_pred             ccccCCCCCc-----cccccccCcceee--------------------------cCC-CCcccccccccccccccccccc
Q 039505          245 RISPVEGGTH-----MSTTIAGTAGFLN--------------------------TKN-PVISKSIENGNSHLRDKSTVDL  292 (342)
Q Consensus       245 ~~~~~~~~~~-----~~~~~~Gt~~y~a--------------------------tG~-~P~~~~~~~~~~~l~~~~~~d~  292 (342)
                      ++.+++....     ......||..|+|                          ||. +|+.......   +.. .+.+ 
T Consensus       167 kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~---~~~-~i~~-  241 (309)
T d1fvra_         167 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE---LYE-KLPQ-  241 (309)
T ss_dssp             EECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH---HHH-HGGG-
T ss_pred             EEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHH---HHH-HHHh-
Confidence            5555443321     1123568999998                          755 5665443221   111 1111 


Q ss_pred             cCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhccCC
Q 039505          293 SFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNGS  337 (342)
Q Consensus       293 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i~~~  337 (342)
                      ....+.+.....++.+++.+||+.+|++||||.||++.|+.+.+.
T Consensus       242 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~  286 (309)
T d1fvra_         242 GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE  286 (309)
T ss_dssp             TCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             cCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence            111223344556789999999999999999999999999887643

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.90  E-value=1.9e-24  Score=198.64  Aligned_cols=163  Identities=19%  Similarity=0.258  Sum_probs=102.0

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-----c--------------EE-EeeCC---cEEE--
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-----P--------------IV-ECHVG---ALIT--  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-----~--------------Lv-~c~~~---~lv~--  211 (342)
                      +.|.  ++||+|+||+||+|+...+  .||||++.........     |              ++ ++..+   ++|+  
T Consensus         9 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~   88 (307)
T d1a06a_           9 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQL   88 (307)
T ss_dssp             GTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             cceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence            3455  8999999999999998754  8999999765432221     1              33 33333   3333  


Q ss_pred             E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecC---C--CccccCCCCCc-----c
Q 039505          212 I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNE---K--SRISPVEGGTH-----M  255 (342)
Q Consensus       212 m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~---~--a~~~~~~~~~~-----~  255 (342)
                      +                          ++.||+|||+   .+|+||||||+|||++.   +  .++.+++....     .
T Consensus        89 ~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~---~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~  165 (307)
T d1a06a_          89 VSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV  165 (307)
T ss_dssp             CCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCC-----------
T ss_pred             cCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhh---ceeeeEEecccceeecccCCCceEEEeccceeEEccCCCe
Confidence            1                          9999999999   99999999999999964   3  44455443321     1


Q ss_pred             ccccccCcceee--------------------------cCCCCcccccccc-cccccccccccccCCCCCChHHHHHHHH
Q 039505          256 STTIAGTAGFLN--------------------------TKNPVISKSIENG-NSHLRDKSTVDLSFKGEFDIISVGKAVE  308 (342)
Q Consensus       256 ~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~-~~~l~~~~~~d~~l~~~~~~~~~~~l~~  308 (342)
                      ....+||+.|||                          ||+.||....... ...+...   +..............+.+
T Consensus       166 ~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~---~~~~~~~~~~~~s~~~~~  242 (307)
T d1a06a_         166 LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA---EYEFDSPYWDDISDSAKD  242 (307)
T ss_dssp             -------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTT---CCCCCTTTTTTSCHHHHH
T ss_pred             eeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhcc---CCCCCCccccCCCHHHHH
Confidence            234679999999                          9999997654322 0011111   111111222334456889


Q ss_pred             HHHHcccccCCCCCCHHHHHH
Q 039505          309 IAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       309 l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ++.+||+.||++|||+.|+++
T Consensus       243 li~~~L~~dP~~R~s~~eil~  263 (307)
T d1a06a_         243 FIRHLMEKDPEKRFTCEQALQ  263 (307)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHccCCHhHCcCHHHHhc
Confidence            999999999999999999986

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=4.7e-24  Score=192.62  Aligned_cols=153  Identities=18%  Similarity=0.254  Sum_probs=106.6

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC----------cc----------------EE-EeeCC---
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH----------VP----------------IV-ECHVG---  207 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~----------~~----------------Lv-~c~~~---  207 (342)
                      .|.  ++||+|+||+||+|+...+  .||||+++.......          .|                ++ ++...   
T Consensus         5 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~~   84 (273)
T d1xwsa_           5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSF   84 (273)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEE
T ss_pred             eEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCeE
Confidence            455  8999999999999998654  999999875421110          01                33 33333   


Q ss_pred             cEEE--E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC---CccccCCCCCc-
Q 039505          208 ALIT--I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK---SRISPVEGGTH-  254 (342)
Q Consensus       208 ~lv~--m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~---a~~~~~~~~~~-  254 (342)
                      ++|+  +                           +++||+|||+   .+|+||||||+|||++.+   .++.+++.... 
T Consensus        85 ~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~---~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~  161 (273)
T d1xwsa_          85 VLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL  161 (273)
T ss_dssp             EEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred             EEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCCccccCcccceEEecCCCeEEECccccceec
Confidence            3333  1                           8999999999   999999999999999865   35555544321 


Q ss_pred             ---cccccccCcceee---------------------------cCCCCcccccccccccccccccccccCCCCCChHHHH
Q 039505          255 ---MSTTIAGTAGFLN---------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVG  304 (342)
Q Consensus       255 ---~~~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~  304 (342)
                         ......||+.|+|                           ||+.||.......     ..   ...++..    ...
T Consensus       162 ~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~i~-----~~---~~~~~~~----~s~  229 (273)
T d1xwsa_         162 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII-----RG---QVFFRQR----VSS  229 (273)
T ss_dssp             CSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHH-----HC---CCCCSSC----CCH
T ss_pred             ccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchHHh-----hc---ccCCCCC----CCH
Confidence               2244689999999                           9999987542111     11   1111122    234


Q ss_pred             HHHHHHHHcccccCCCCCCHHHHHH
Q 039505          305 KAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       305 ~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ++.+++.+||+.||++|||+.|+++
T Consensus       230 ~~~~li~~~L~~dp~~R~s~~eil~  254 (273)
T d1xwsa_         230 ECQHLIRWCLALRPSDRPTFEEIQN  254 (273)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHccCCHhHCcCHHHHhc
Confidence            5888999999999999999999986

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=3.5e-24  Score=195.43  Aligned_cols=164  Identities=18%  Similarity=0.223  Sum_probs=109.7

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc----------c--------------EE-EeeCC---c
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV----------P--------------IV-ECHVG---A  208 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~----------~--------------Lv-~c~~~---~  208 (342)
                      +.|.  +.||+|+||+||+|+...+  .||||+++........          |              ++ ++.+.   +
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~   89 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   89 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            3455  8999999999999998654  9999999765322211          1              33 44433   3


Q ss_pred             EEE--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC------CccccCCCCCc
Q 039505          209 LIT--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK------SRISPVEGGTH  254 (342)
Q Consensus       209 lv~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~------a~~~~~~~~~~  254 (342)
                      +|+  +                          +++||+|||+   .+|+||||||+|||++.+      .++.+++....
T Consensus        90 iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~---~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~  166 (293)
T d1jksa_          90 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK  166 (293)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred             EEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhh---cceeecccccceEEEecCCCcccceEecchhhhhh
Confidence            443  1                          8999999999   999999999999999876      24444443321


Q ss_pred             -----cccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHH
Q 039505          255 -----MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISV  303 (342)
Q Consensus       255 -----~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~  303 (342)
                           ......||+.|+|                          ||+.||.......  .+...................
T Consensus       167 ~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~--~~~~i~~~~~~~~~~~~~~~s  244 (293)
T d1jksa_         167 IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE--TLANVSAVNYEFEDEYFSNTS  244 (293)
T ss_dssp             CTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHTTCCCCCHHHHTTSC
T ss_pred             cCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHH--HHHHHHhcCCCCCchhcCCCC
Confidence                 2234679999999                          9999997654322  110000011111111112234


Q ss_pred             HHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          304 GKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       304 ~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ..+.+++.+||+.||++|||+.|+++
T Consensus       245 ~~~~~li~~~L~~dP~~R~s~~eil~  270 (293)
T d1jksa_         245 ALAKDFIRRLLVKDPKKRMTIQDSLQ  270 (293)
T ss_dssp             HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhc
Confidence            55889999999999999999999985

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.89  E-value=2e-24  Score=201.90  Aligned_cols=165  Identities=15%  Similarity=0.167  Sum_probs=111.2

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc----c--------------EE-EeeCC---cEEE--E
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV----P--------------IV-ECHVG---ALIT--I  212 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~----~--------------Lv-~c~~~---~lv~--m  212 (342)
                      ++|.  +.||+|+||+||+|+...+  .||||++........+    |              ++ ++.+.   ++|+  +
T Consensus        26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~  105 (350)
T d1koaa2          26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  105 (350)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            3565  8999999999999998754  9999999765322111    1              33 33332   3333  1


Q ss_pred             ---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC----CccccCCCCCc-----cc
Q 039505          213 ---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK----SRISPVEGGTH-----MS  256 (342)
Q Consensus       213 ---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~----a~~~~~~~~~~-----~~  256 (342)
                                                 ++.||+|||+   .+||||||||+|||++.+    .++.+++....     ..
T Consensus       106 ~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~---~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~  182 (350)
T d1koaa2         106 SGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV  182 (350)
T ss_dssp             CSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCE
T ss_pred             CCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh---cCCeeeeechhHeeeccCCCCeEEEeecchheeccccccc
Confidence                                       9999999999   999999999999999753    45555554322     12


Q ss_pred             cccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHH
Q 039505          257 TTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIA  310 (342)
Q Consensus       257 ~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~  310 (342)
                      ....||+.|||                          ||+.||.......  .+......+..............+.+++
T Consensus       183 ~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~--~~~~i~~~~~~~~~~~~~~~s~~~~~li  260 (350)
T d1koaa2         183 KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE--TLRNVKSCDWNMDDSAFSGISEDGKDFI  260 (350)
T ss_dssp             EEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHTCCCSCCGGGGGCCHHHHHHH
T ss_pred             ceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHH--HHHHHHhCCCCCCcccccCCCHHHHHHH
Confidence            34689999999                          9999997653322  1110000111111111223345688999


Q ss_pred             HHcccccCCCCCCHHHHHHH
Q 039505          311 MASVSSKVNRRPLMNQVVMV  330 (342)
Q Consensus       311 ~~Cl~~~P~~RPsm~eV~~~  330 (342)
                      .+||+.||++|||+.|+++.
T Consensus       261 ~~~L~~dP~~R~t~~eil~h  280 (350)
T d1koaa2         261 RKLLLADPNTRMTIHQALEH  280 (350)
T ss_dssp             HHHCCSSGGGSCCHHHHHHS
T ss_pred             HHHccCChhHCcCHHHHhcC
Confidence            99999999999999999873

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.89  E-value=6e-24  Score=192.94  Aligned_cols=165  Identities=17%  Similarity=0.203  Sum_probs=105.2

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCC--c----c--------------EE-EeeCC---cEEE-E-
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGH--V----P--------------IV-ECHVG---ALIT-I-  212 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~--~----~--------------Lv-~c~~~---~lv~-m-  212 (342)
                      +|.  +.||+|+||+||+|+++++ .||||+++.......  +    |              ++ ++...   ++++ + 
T Consensus         3 ~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~~   82 (286)
T d1ob3a_           3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHL   82 (286)
T ss_dssp             SEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECC
T ss_pred             CceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEee
Confidence            455  8899999999999999887 999999976532211  1    1              44 44443   3333 1 


Q ss_pred             --------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCC------ccccc
Q 039505          213 --------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGT------HMSTT  258 (342)
Q Consensus       213 --------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~------~~~~~  258 (342)
                                                +++||+|||+   .+||||||||+|||++.+.  ++.+++...      .....
T Consensus        83 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~  159 (286)
T d1ob3a_          83 DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH  159 (286)
T ss_dssp             SEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-------
T ss_pred             hhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhcc---CcEEecCCCCceeeEcCCCCEEecccccceecccCccccce
Confidence                                      8999999999   9999999999999999984  444433211      11223


Q ss_pred             cccCcceee---------------------------cCCCCcccccccc-ccccc---------------ccccccccCC
Q 039505          259 IAGTAGFLN---------------------------TKNPVISKSIENG-NSHLR---------------DKSTVDLSFK  295 (342)
Q Consensus       259 ~~Gt~~y~a---------------------------tG~~P~~~~~~~~-~~~l~---------------~~~~~d~~l~  295 (342)
                      ..|++.|+|                           ||+.||....... ...+.               .....+....
T Consensus       160 ~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (286)
T d1ob3a_         160 EIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFT  239 (286)
T ss_dssp             --CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCC
T ss_pred             ecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccccc
Confidence            468888887                           9999997543211 00000               0000000000


Q ss_pred             -------CCCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          296 -------GEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       296 -------~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                             ..........+.+++.+||+.||++|||+.|+++
T Consensus       240 ~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         240 VYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             CCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                   0111222356889999999999999999999974

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=2.2e-24  Score=196.43  Aligned_cols=159  Identities=23%  Similarity=0.299  Sum_probs=107.0

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCC---CCCCc----c--------------EE-EeeCC---cEEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSS---SQGHV----P--------------IV-ECHVG---ALIT  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~---~~~~~----~--------------Lv-~c~~~---~lv~  211 (342)
                      ++|.  +.||+|+||+||+|+...+  .||||+++...   .....    |              +. ++...   ++|+
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm   87 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL   87 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence            4566  8999999999999998654  99999986432   11111    1              33 33333   3333


Q ss_pred             --E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc-------
Q 039505          212 --I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH-------  254 (342)
Q Consensus       212 --m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~-------  254 (342)
                        +                          +++||+|||+   .+||||||||+|||++++  .++.+++....       
T Consensus        88 Ey~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~---~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~  164 (288)
T d1uu3a_          88 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ  164 (288)
T ss_dssp             CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred             EccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhcc---ccEEcCcCCccccccCCCceEEecccccceecccCCcc
Confidence              1                          8999999999   999999999999999988  34444443321       


Q ss_pred             -cccccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHH
Q 039505          255 -MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAV  307 (342)
Q Consensus       255 -~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~  307 (342)
                       .....+||+.|+|                          ||+.||.......   +. ..+....+  ..+.....++.
T Consensus       165 ~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~---~~-~~i~~~~~--~~p~~~s~~~~  238 (288)
T d1uu3a_         165 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL---IF-QKIIKLEY--DFPEKFFPKAR  238 (288)
T ss_dssp             -----CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HH-HHHHTTCC--CCCTTCCHHHH
T ss_pred             cccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHH---HH-HHHHcCCC--CCCccCCHHHH
Confidence             1233679999999                          9999998654322   11 11111111  12223345588


Q ss_pred             HHHHHcccccCCCCCCHHHHH
Q 039505          308 EIAMASVSSKVNRRPLMNQVV  328 (342)
Q Consensus       308 ~l~~~Cl~~~P~~RPsm~eV~  328 (342)
                      +++.+||+.||++|||+.|+.
T Consensus       239 ~li~~~L~~dP~~R~t~~e~~  259 (288)
T d1uu3a_         239 DLVEKLLVLDATKRLGCEEME  259 (288)
T ss_dssp             HHHHTTSCSSGGGSTTSGGGT
T ss_pred             HHHHHHccCCHhHCcCHHHHc
Confidence            999999999999999999864

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.89  E-value=1.4e-23  Score=191.71  Aligned_cols=169  Identities=15%  Similarity=0.186  Sum_probs=109.2

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc----------------EE-Ee-eCC---cEEE--E--
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP----------------IV-EC-HVG---ALIT--I--  212 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~----------------Lv-~c-~~~---~lv~--m--  212 (342)
                      .|.  +.||+|+||+||+|++..+  .||||++..........                .+ .| ..+   ++|+  +  
T Consensus         8 rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~~~   87 (299)
T d1ckia_           8 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGP   87 (299)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECCCC
T ss_pred             EEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEcCC
Confidence            455  8999999999999998654  99999987654332211                22 33 222   3333  1  


Q ss_pred             ------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-----CccccCCCCCc---------
Q 039505          213 ------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-----SRISPVEGGTH---------  254 (342)
Q Consensus       213 ------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-----a~~~~~~~~~~---------  254 (342)
                                              +++||+|||+   .+||||||||+|||++..     .++.+++....         
T Consensus        88 ~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~  164 (299)
T d1ckia_          88 SLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH  164 (299)
T ss_dssp             BHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCB
T ss_pred             chhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHhhccccccCCCceeeeeccCcceeccccccccc
Confidence                                    8999999999   999999999999997643     33344433211         


Q ss_pred             ----cccccccCcceee--------------------------cCCCCccccccccccccc-c--cccccccCCCCCChH
Q 039505          255 ----MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLR-D--KSTVDLSFKGEFDII  301 (342)
Q Consensus       255 ----~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~-~--~~~~d~~l~~~~~~~  301 (342)
                          ......||+.|||                          ||+.||...........+ .  .....+.. ......
T Consensus       165 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  243 (299)
T d1ckia_         165 IPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI-EVLCKG  243 (299)
T ss_dssp             CCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCH-HHHTTT
T ss_pred             eeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCCh-hHhccC
Confidence                1233679999999                          999999765433210111 1  00000000 001112


Q ss_pred             HHHHHHHHHHHcccccCCCCCCHHHHHHHHHhc
Q 039505          302 SVGKAVEIAMASVSSKVNRRPLMNQVVMVREQG  334 (342)
Q Consensus       302 ~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i  334 (342)
                      .+.++.+++..||+.+|++||++.++.+.|+.+
T Consensus       244 ~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~  276 (299)
T d1ckia_         244 YPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL  276 (299)
T ss_dssp             SCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence            335588999999999999999999998888765

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.89  E-value=7.2e-24  Score=199.13  Aligned_cols=163  Identities=25%  Similarity=0.334  Sum_probs=108.8

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCC---CCCc----c-----------------EE-EeeCC---c
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSS---QGHV----P-----------------IV-ECHVG---A  208 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~---~~~~----~-----------------Lv-~c~~~---~  208 (342)
                      ++|.  ++||+|+||+||+|+...+  .||||++.....   ....    +                 +. ++...   +
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~   83 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS   83 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEE
Confidence            4566  8999999999999998754  999999853210   0000    0                 33 33333   3


Q ss_pred             EEE--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc----
Q 039505          209 LIT--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH----  254 (342)
Q Consensus       209 lv~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~----  254 (342)
                      +|+  +                          ++.||+|||+   .+||||||||+|||++.+  .++.+++....    
T Consensus        84 ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~---~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~  160 (364)
T d1omwa3          84 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK  160 (364)
T ss_dssp             EEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSSSCEEECCCTTCEECSSS
T ss_pred             EEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHH---CCccceeeccceeEEcCCCcEEEeeeceeeecCCC
Confidence            333  1                          9999999999   999999999999999988  45555544322    


Q ss_pred             cccccccCcceee---------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHH
Q 039505          255 MSTTIAGTAGFLN---------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAV  307 (342)
Q Consensus       255 ~~~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~  307 (342)
                      .....+||+.|+|                           ||+.||..........+.. ......  ...+.....++.
T Consensus       161 ~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~-~~~~~~--~~~~~~~s~~~~  237 (364)
T d1omwa3         161 KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR-MTLTMA--VELPDSFSPELR  237 (364)
T ss_dssp             CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHH-HSSSCC--CCCCSSSCHHHH
T ss_pred             cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-hcccCC--CCCCCCCCHHHH
Confidence            2234689999999                           9999997654322101111 111111  111223344588


Q ss_pred             HHHHHcccccCCCCCC-----HHHHHH
Q 039505          308 EIAMASVSSKVNRRPL-----MNQVVM  329 (342)
Q Consensus       308 ~l~~~Cl~~~P~~RPs-----m~eV~~  329 (342)
                      +++.+||+.||++|||     +.|+++
T Consensus       238 ~li~~~L~~dP~~R~t~~~~~a~eil~  264 (364)
T d1omwa3         238 SLLEGLLQRDVNRRLGCLGRGAQEVKE  264 (364)
T ss_dssp             HHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred             HHHHHHcccCHHHhCCCcccCHHHHHc
Confidence            9999999999999999     577763

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.88  E-value=1.3e-23  Score=190.08  Aligned_cols=164  Identities=15%  Similarity=0.163  Sum_probs=112.1

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc-------------c---------------EE-EeeCC
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV-------------P---------------IV-ECHVG  207 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~-------------~---------------Lv-~c~~~  207 (342)
                      ++|.  +.||+|+||+||+|+...+  .||||+++........             |               ++ ++.++
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~   82 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN   82 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence            3455  8999999999999998654  9999999765432211             0               33 44443


Q ss_pred             ---cEEE--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc
Q 039505          208 ---ALIT--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH  254 (342)
Q Consensus       208 ---~lv~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~  254 (342)
                         ++|+  +                          +++||+|||+   .+|+||||||+|||++.+  .++.+++....
T Consensus        83 ~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~  159 (277)
T d1phka_          83 TFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQ  159 (277)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             cceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---cCCcccccccceEEEcCCCCeEEccchheeE
Confidence               3444  2                          9999999999   999999999999999988  44555544321


Q ss_pred             -----cccccccCcceee--------------------------------cCCCCcccccccccccccccccccccCCCC
Q 039505          255 -----MSTTIAGTAGFLN--------------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGE  297 (342)
Q Consensus       255 -----~~~~~~Gt~~y~a--------------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~  297 (342)
                           ......||+.|+|                                ||+.||...........+...  .......
T Consensus       160 ~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~--~~~~~~~  237 (277)
T d1phka_         160 LDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG--NYQFGSP  237 (277)
T ss_dssp             CCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT--CCCCCTT
T ss_pred             ccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhC--CCCCCCc
Confidence                 2234678999988                                999999865432200000000  1111222


Q ss_pred             CChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          298 FDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       298 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      .......++.+++.+||+.+|++|||+.||++
T Consensus       238 ~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~  269 (277)
T d1phka_         238 EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  269 (277)
T ss_dssp             TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             ccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            22344566889999999999999999999875

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.88  E-value=5.7e-24  Score=198.95  Aligned_cols=164  Identities=16%  Similarity=0.181  Sum_probs=110.7

Q ss_pred             hccC--cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCCCc----c--------------EE-EeeCC---cEEE--E
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQGHV----P--------------IV-ECHVG---ALIT--I  212 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~~~----~--------------Lv-~c~~~---~lv~--m  212 (342)
                      +.|.  +.||+|+||+||+|+... + .||||+++........    |              ++ ++..+   ++|+  +
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~  108 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL  108 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            3465  899999999999999865 4 9999998765321111    1              33 33332   3333  1


Q ss_pred             ---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecC--C--CccccCCCCCc-----cc
Q 039505          213 ---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNE--K--SRISPVEGGTH-----MS  256 (342)
Q Consensus       213 ---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~--~--a~~~~~~~~~~-----~~  256 (342)
                                                 |++||+|||+   .+||||||||+||||+.  +  .++.+++....     ..
T Consensus       109 ~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~---~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~  185 (352)
T d1koba_         109 SGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV  185 (352)
T ss_dssp             CCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred             CCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccccccccccccCCCeEEEeecccceecCCCCce
Confidence                                       9999999999   99999999999999984  3  34555544322     22


Q ss_pred             cccccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHH
Q 039505          257 TTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIA  310 (342)
Q Consensus       257 ~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~  310 (342)
                      ....||+.|+|                          ||+.||.......  .+......+.............++.+++
T Consensus       186 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~--~~~~i~~~~~~~~~~~~~~~s~~~~~li  263 (352)
T d1koba_         186 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE--TLQNVKRCDWEFDEDAFSSVSPEAKDFI  263 (352)
T ss_dssp             EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH--HHHHHHHCCCCCCSSTTTTSCHHHHHHH
T ss_pred             eeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhCCCCCCcccccCCCHHHHHHH
Confidence            34689999998                          9999997654322  1111011111222222233445688999


Q ss_pred             HHcccccCCCCCCHHHHHH
Q 039505          311 MASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       311 ~~Cl~~~P~~RPsm~eV~~  329 (342)
                      .+||+.||++|||+.|+++
T Consensus       264 ~~~L~~dp~~R~s~~eil~  282 (352)
T d1koba_         264 KNLLQKEPRKRLTVHDALE  282 (352)
T ss_dssp             HTTSCSSGGGSCCHHHHHT
T ss_pred             HHHccCChhHCcCHHHHhc
Confidence            9999999999999999986

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2.6e-23  Score=189.94  Aligned_cols=174  Identities=17%  Similarity=0.171  Sum_probs=110.9

Q ss_pred             hccC--cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCCCc------c--------------EE-EeeCC---cEEE-
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQGHV------P--------------IV-ECHVG---ALIT-  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~~~------~--------------Lv-~c~~~---~lv~-  211 (342)
                      ++|.  +.||+|+||+||+|+... + .||||+++........      |              +. ++..+   ++|+ 
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            4676  899999999999999864 4 9999999765322111      1              33 44333   4444 


Q ss_pred             -E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCC------Ccc
Q 039505          212 -I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGG------THM  255 (342)
Q Consensus       212 -m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~------~~~  255 (342)
                       +                           ++.||+|||+   .+||||||||+|||++.+  .++.+++..      ...
T Consensus        82 ~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~---~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~  158 (298)
T d1gz8a_          82 FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT  158 (298)
T ss_dssp             CCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBC
T ss_pred             ecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhc---CCEEccccCchheeecccCcceeccCCcceeccCCccc
Confidence             1                           9999999999   999999999999999988  344444322      112


Q ss_pred             ccccccCcceee---------------------------cCCCCcccccccc-ccccc-----------c----cccccc
Q 039505          256 STTIAGTAGFLN---------------------------TKNPVISKSIENG-NSHLR-----------D----KSTVDL  292 (342)
Q Consensus       256 ~~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~-~~~l~-----------~----~~~~d~  292 (342)
                      .....||+.|+|                           ||+.||....... ...+.           .    .....+
T Consensus       159 ~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  238 (298)
T d1gz8a_         159 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP  238 (298)
T ss_dssp             TTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCT
T ss_pred             ceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhcccccccccccc
Confidence            233579999998                           9999997543211 00000           0    000000


Q ss_pred             cCCC--CC-----ChHHHHHHHHHHHHcccccCCCCCCHHHHHHH--HHhccCC
Q 039505          293 SFKG--EF-----DIISVGKAVEIAMASVSSKVNRRPLMNQVVMV--REQGNGS  337 (342)
Q Consensus       293 ~l~~--~~-----~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~--L~~i~~~  337 (342)
                      ....  ..     ......++.+++.+|++.||++|||+.|+++.  ++++.+.
T Consensus       239 ~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~~p  292 (298)
T d1gz8a_         239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP  292 (298)
T ss_dssp             TSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCCC
T ss_pred             ccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccCCCC
Confidence            0000  00     01223567889999999999999999999874  6666543

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.7e-23  Score=191.43  Aligned_cols=173  Identities=16%  Similarity=0.236  Sum_probs=111.4

Q ss_pred             hhccC--cccCcCCCeeEEEEEEC-C-C-eEEEEEccCCCCCCC------cc-----------------EE-EeeC----
Q 039505          160 TNNFE--RVPYKGGFITVYHGQLV-K-S-EVAMKMLSPSSSQGH------VP-----------------IV-ECHV----  206 (342)
Q Consensus       160 t~~f~--~~lG~G~fG~Vykg~~~-~-~-~vAVK~l~~~~~~~~------~~-----------------Lv-~c~~----  206 (342)
                      .++|.  +.||+|+||+||+|++. + + .||||+++.......      ++                 ++ +|..    
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            35676  89999999999999984 3 3 799999865422211      11                 33 3321    


Q ss_pred             C----cEEE--E---------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCC
Q 039505          207 G----ALIT--I---------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEG  251 (342)
Q Consensus       207 ~----~lv~--m---------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~  251 (342)
                      .    ++++  +                           +++||+|||+   .+|+||||||+|||++++  .++.+++.
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~---~~ivHrDiKp~NILi~~~~~~kl~dfg~  162 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGL  162 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECSCCS
T ss_pred             cCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCEEecCCCccEEEEcCCCCeeecchhh
Confidence            1    2222  1                           8999999999   999999999999999987  45555443


Q ss_pred             CCc-----cccccccCcceee--------------------------cCCCCcccccccc-cccccc-------------
Q 039505          252 GTH-----MSTTIAGTAGFLN--------------------------TKNPVISKSIENG-NSHLRD-------------  286 (342)
Q Consensus       252 ~~~-----~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~-~~~l~~-------------  286 (342)
                      ...     ......||+.|+|                          ||+.||....... ...+..             
T Consensus       163 ~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  242 (305)
T d1blxa_         163 ARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD  242 (305)
T ss_dssp             CCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTT
T ss_pred             hhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhccccc
Confidence            322     2234789999999                          9999997653211 000000             


Q ss_pred             ----cccccccCC---CCCChHHHHHHHHHHHHcccccCCCCCCHHHHHHH--HHhcc
Q 039505          287 ----KSTVDLSFK---GEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMV--REQGN  335 (342)
Q Consensus       287 ----~~~~d~~l~---~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~--L~~i~  335 (342)
                          .........   ..........+.+++.+||+.||++|||+.|+++.  +++++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i~  300 (305)
T d1blxa_         243 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLE  300 (305)
T ss_dssp             CSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred             ccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcCch
Confidence                000000000   00112233457889999999999999999999863  55554

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2.9e-23  Score=193.88  Aligned_cols=169  Identities=15%  Similarity=0.185  Sum_probs=111.5

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc--------------EE-EeeC-----C----cEEE--E----
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP--------------IV-ECHV-----G----ALIT--I----  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~--------------Lv-~c~~-----~----~lv~--m----  212 (342)
                      ++||+|+||+||+|++..+  .||||++........+|              ++ ++..     .    ++|+  +    
T Consensus        26 k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~~~  105 (350)
T d1q5ka_          26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV  105 (350)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECCSSSCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEEECCSEEH
T ss_pred             eEEeeCcCeEEEEEEECCCCCEEEEEEECccchHHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEEeccCCcc
Confidence            7899999999999999754  99999998765444444              33 3311     1    2333  1    


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC---CccccCCCCCc-----ccccc
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK---SRISPVEGGTH-----MSTTI  259 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~---a~~~~~~~~~~-----~~~~~  259 (342)
                                               +++||+|||+   .+|+||||||+|||++.+   .++.+++....     .....
T Consensus       106 ~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~---~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~~~~~~  182 (350)
T d1q5ka_         106 YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY  182 (350)
T ss_dssp             HHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTTSCCCSC
T ss_pred             HHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHh---cCCcccCCCcceEEEecCCCceeEecccchhhccCCcccccc
Confidence                                     8999999999   999999999999999976   34555554322     12335


Q ss_pred             ccCcceee---------------------------cCCCCcccccccc-cccccc--------------cccccccCC--
Q 039505          260 AGTAGFLN---------------------------TKNPVISKSIENG-NSHLRD--------------KSTVDLSFK--  295 (342)
Q Consensus       260 ~Gt~~y~a---------------------------tG~~P~~~~~~~~-~~~l~~--------------~~~~d~~l~--  295 (342)
                      .||+.|+|                           ||+.||....... ...+..              ....+..+.  
T Consensus       183 ~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~  262 (350)
T d1q5ka_         183 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQI  262 (350)
T ss_dssp             CSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCC
T ss_pred             cccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhcccccc
Confidence            78899988                           9999987543211 000000              000010000  


Q ss_pred             ------CCCChHHHHHHHHHHHHcccccCCCCCCHHHHHH--HHHhccC
Q 039505          296 ------GEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM--VREQGNG  336 (342)
Q Consensus       296 ------~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~--~L~~i~~  336 (342)
                            ..........+.+++.+||+.||++|||+.|+++  .+++++.
T Consensus       263 ~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~  311 (350)
T d1q5ka_         263 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD  311 (350)
T ss_dssp             CCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGC
T ss_pred             ccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccccC
Confidence                  0011223445888999999999999999999985  3555543

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=2.6e-23  Score=193.16  Aligned_cols=165  Identities=17%  Similarity=0.126  Sum_probs=108.1

Q ss_pred             hccC---cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCcc---------------EE-EeeC---C----cEEE-
Q 039505          161 NNFE---RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHVP---------------IV-ECHV---G----ALIT-  211 (342)
Q Consensus       161 ~~f~---~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~~---------------Lv-~c~~---~----~lv~-  211 (342)
                      ++|.   ++||+|+||+||+|+...+  .||||+++.... ..++               ++ ++..   .    ++|+ 
T Consensus        11 ~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmE   89 (335)
T d2ozaa1          11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK-ARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVME   89 (335)
T ss_dssp             GTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECSHH-HHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred             cCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCcHH-HHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEE
Confidence            4565   5699999999999998654  999999864321 1111               22 2211   1    2222 


Q ss_pred             -E----------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-----CccccCCCCCc---
Q 039505          212 -I----------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-----SRISPVEGGTH---  254 (342)
Q Consensus       212 -m----------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-----a~~~~~~~~~~---  254 (342)
                       +                            +++||+|||+   .+|+||||||+|||++++     .++.+++....   
T Consensus        90 y~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~---~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~  166 (335)
T d2ozaa1          90 CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS  166 (335)
T ss_dssp             CCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCC
T ss_pred             CCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHH---cCCccccccccccccccccccccccccccceeeeccC
Confidence             1                            8999999999   999999999999999864     45555554321   


Q ss_pred             --cccccccCcceee--------------------------cCCCCcccccccccccccccccccc--cCCCCCChHHHH
Q 039505          255 --MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDL--SFKGEFDIISVG  304 (342)
Q Consensus       255 --~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~--~l~~~~~~~~~~  304 (342)
                        ......||+.|||                          ||+.||...........+...+...  .++.........
T Consensus       167 ~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~  246 (335)
T d2ozaa1         167 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSE  246 (335)
T ss_dssp             CCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHSCH
T ss_pred             CCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccCCH
Confidence              2234689999999                          9999997654322000000111111  111111223456


Q ss_pred             HHHHHHHHcccccCCCCCCHHHHHH
Q 039505          305 KAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       305 ~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      ++.+++.+||+.||++|||+.|+++
T Consensus       247 ~~~~li~~~L~~dP~~R~s~~eil~  271 (335)
T d2ozaa1         247 EVKMLIRNLLKTEPTQRMTITEFMN  271 (335)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHHccCChhHCcCHHHHHc
Confidence            6899999999999999999999986

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1.2e-23  Score=192.25  Aligned_cols=161  Identities=21%  Similarity=0.249  Sum_probs=103.1

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc---------c--------------EE-EeeCC---cEEE--E-
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV---------P--------------IV-ECHVG---ALIT--I-  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~---------~--------------Lv-~c~~~---~lv~--m-  212 (342)
                      ++||+|+||+||+|+...+  .||||+++........         |              ++ ++...   ++|+  + 
T Consensus         4 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~~   83 (299)
T d1ua2a_           4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFME   83 (299)
T ss_dssp             EEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCS
T ss_pred             eEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhhc
Confidence            6799999999999998654  9999999765322111         1              44 44333   4444  2 


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------ccccc
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------MSTTI  259 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------~~~~~  259 (342)
                                               +++||+|||+   .+|+||||||+|||++++  .++.+++....      .....
T Consensus        84 ~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~~~  160 (299)
T d1ua2a_          84 TDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQ  160 (299)
T ss_dssp             EEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCS
T ss_pred             chHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhc---cceecccCCcceEEecCCCccccccCccccccCCCcccccce
Confidence                                     8999999999   999999999999999988  34444433211      12235


Q ss_pred             ccCcceee---------------------------cCCCCcccccccc-cccccc-------c------cccc----ccC
Q 039505          260 AGTAGFLN---------------------------TKNPVISKSIENG-NSHLRD-------K------STVD----LSF  294 (342)
Q Consensus       260 ~Gt~~y~a---------------------------tG~~P~~~~~~~~-~~~l~~-------~------~~~d----~~l  294 (342)
                      +||+.|+|                           ||++||....+.. ...+..       .      ....    ...
T Consensus       161 ~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (299)
T d1ua2a_         161 VVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSF  240 (299)
T ss_dssp             CCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCC
T ss_pred             ecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhccC
Confidence            79999999                           9999987543221 000000       0      0000    000


Q ss_pred             CCCCC-----hHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          295 KGEFD-----IISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       295 ~~~~~-----~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                       ...+     ......+.+++.+||+.||++|||+.|+++
T Consensus       241 -~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~  279 (299)
T d1ua2a_         241 -PGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK  279 (299)
T ss_dssp             -CCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             -CCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhC
Confidence             0011     112356889999999999999999999986

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.87  E-value=2.7e-23  Score=191.57  Aligned_cols=160  Identities=21%  Similarity=0.227  Sum_probs=108.5

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCC---CCCCc----c--------------EE-EeeCC---cEEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSS---SQGHV----P--------------IV-ECHVG---ALIT  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~---~~~~~----~--------------Lv-~c~~~---~lv~  211 (342)
                      ++|.  +.||+|+||+||+|+...+  .||||+++...   ....+    |              +. ++...   ++|+
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   83 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   83 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence            4566  8999999999999998654  99999986431   11111    1              33 33333   3333


Q ss_pred             --E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc---cccc
Q 039505          212 --I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH---MSTT  258 (342)
Q Consensus       212 --m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~---~~~~  258 (342)
                        +                          ++.||+|||+   .+||||||||+|||++.+.  ++.+++....   ....
T Consensus        84 E~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~~  160 (316)
T d1fota_          84 DYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYT  160 (316)
T ss_dssp             CCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCC
T ss_pred             eecCCccccccccccccccccHHHHHHHHHHHhhhhhcc---CcEEccccCchheeEcCCCCEEEecCccceEecccccc
Confidence              1                          9999999999   9999999999999999884  4444443322   2344


Q ss_pred             cccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHH
Q 039505          259 IAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMA  312 (342)
Q Consensus       259 ~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~  312 (342)
                      .+||+.|||                          ||+.||.......   +. ..+.....  ..+......+.+++.+
T Consensus       161 ~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~---~~-~~i~~~~~--~~p~~~s~~~~~li~~  234 (316)
T d1fota_         161 LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK---TY-EKILNAEL--RFPPFFNEDVKDLLSR  234 (316)
T ss_dssp             CCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH---HH-HHHHHCCC--CCCTTSCHHHHHHHHH
T ss_pred             ccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHH---HH-HHHHcCCC--CCCCCCCHHHHHHHHH
Confidence            789999999                          9999997654322   11 11111111  1122233458889999


Q ss_pred             cccccCCCCC-----CHHHHHH
Q 039505          313 SVSSKVNRRP-----LMNQVVM  329 (342)
Q Consensus       313 Cl~~~P~~RP-----sm~eV~~  329 (342)
                      ||+.+|.+||     |+.++++
T Consensus       235 ~L~~dp~~R~~~~r~t~~~il~  256 (316)
T d1fota_         235 LITRDLSQRLGNLQNGTEDVKN  256 (316)
T ss_dssp             HTCSCTTTCTTSSTTTTHHHHT
T ss_pred             HhhhCHHhccccchhhHHHHHc
Confidence            9999999996     8888875

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=4.1e-23  Score=191.95  Aligned_cols=159  Identities=19%  Similarity=0.233  Sum_probs=108.7

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCC---CCCCc----c--------------EE-EeeCC---cEEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSS---SQGHV----P--------------IV-ECHVG---ALIT  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~---~~~~~----~--------------Lv-~c~~~---~lv~  211 (342)
                      ++|.  +.||+|+||+||+|+...+  .||||++++..   .....    |              +. .+.+.   ++|+
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~   84 (337)
T d1o6la_           5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccce
Confidence            5676  8999999999999998654  99999987532   11111    1              33 33333   3333


Q ss_pred             --E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc------c
Q 039505          212 --I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH------M  255 (342)
Q Consensus       212 --m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~------~  255 (342)
                        +                          ++.||+|||+   .+||||||||+|||++++.  ++.+++....      .
T Consensus        85 ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~~  161 (337)
T d1o6la_          85 EYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT  161 (337)
T ss_dssp             ECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCC
T ss_pred             eccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhh---cCccccccCHHHeEecCCCCEEEeecccccccccCCcc
Confidence              1                          8999999999   9999999999999999884  4444443321      1


Q ss_pred             ccccccCcceee--------------------------cCCCCcccccccccccccc-cccccccCCCCCChHHHHHHHH
Q 039505          256 STTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRD-KSTVDLSFKGEFDIISVGKAVE  308 (342)
Q Consensus       256 ~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~l~~~~~~~~~~~l~~  308 (342)
                      ....+||+.|+|                          ||++||.......   +.. ...-.+.+    +.....++.+
T Consensus       162 ~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~---~~~~i~~~~~~~----p~~~s~~~~d  234 (337)
T d1o6la_         162 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER---LFELILMEEIRF----PRTLSPEAKS  234 (337)
T ss_dssp             BCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHCCCCC----CTTSCHHHHH
T ss_pred             cccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHH---HHHHHhcCCCCC----CccCCHHHHH
Confidence            234789999999                          9999988654322   111 00111122    2233445788


Q ss_pred             HHHHcccccCCCCCC-----HHHHHH
Q 039505          309 IAMASVSSKVNRRPL-----MNQVVM  329 (342)
Q Consensus       309 l~~~Cl~~~P~~RPs-----m~eV~~  329 (342)
                      ++.+||+.||++||+     +.|+++
T Consensus       235 li~~~L~~dP~~R~~~~~~~~~eil~  260 (337)
T d1o6la_         235 LLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             HHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             HHHhhccCCchhhcccccccHHHHHc
Confidence            999999999999995     777764

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.87  E-value=4.1e-23  Score=192.93  Aligned_cols=160  Identities=18%  Similarity=0.211  Sum_probs=107.8

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCC---CCCC----cc--------------EE-EeeCC---cEEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSS---SQGH----VP--------------IV-ECHVG---ALIT  211 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~---~~~~----~~--------------Lv-~c~~~---~lv~  211 (342)
                      ++|.  +.||+|+||+||+|++..+  .||||+++...   ....    ++              +. ++...   ++|+
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~  120 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence            4566  8999999999999998754  99999986431   1111    11              23 33333   2332


Q ss_pred             --E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc---cccc
Q 039505          212 --I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH---MSTT  258 (342)
Q Consensus       212 --m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~---~~~~  258 (342)
                        +                          +++||.|||+   .+||||||||+|||++.+.  ++.+++....   ....
T Consensus       121 e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~---~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~~  197 (350)
T d1rdqe_         121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT  197 (350)
T ss_dssp             ECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCC
T ss_pred             ccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCcCCHHHcccCCCCCEEeeeceeeeeccccccc
Confidence              1                          8999999999   9999999999999999884  4555544322   2234


Q ss_pred             cccCcceee--------------------------cCCCCcccccccccccccccccccccCCCCCChHHHHHHHHHHHH
Q 039505          259 IAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVGKAVEIAMA  312 (342)
Q Consensus       259 ~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~~~~~l~~l~~~  312 (342)
                      ..||+.|||                          ||+.||.......   +. ..+.....  ..+......+.+++.+
T Consensus       198 ~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~---~~-~~i~~~~~--~~p~~~s~~~~~li~~  271 (350)
T d1rdqe_         198 LCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ---IY-EKIVSGKV--RFPSHFSSDLKDLLRN  271 (350)
T ss_dssp             CEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HH-HHHHHCCC--CCCTTCCHHHHHHHHH
T ss_pred             ccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHH---HH-HHHhcCCC--CCCccCCHHHHHHHHH
Confidence            789999999                          9999997643221   11 11111111  1122234458899999


Q ss_pred             cccccCCCCC-----CHHHHHH
Q 039505          313 SVSSKVNRRP-----LMNQVVM  329 (342)
Q Consensus       313 Cl~~~P~~RP-----sm~eV~~  329 (342)
                      ||+.||.+|+     |+.++++
T Consensus       272 ~L~~dP~kR~~~~r~t~~ell~  293 (350)
T d1rdqe_         272 LLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             HSCSCTTTCTTSSTTTTHHHHT
T ss_pred             HhhhCHHhccccccccHHHHHc
Confidence            9999999994     8899875

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.86  E-value=7.8e-23  Score=186.37  Aligned_cols=170  Identities=13%  Similarity=0.133  Sum_probs=110.9

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc--c---------------EE-EeeCC---cEEE--E-
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV--P---------------IV-ECHVG---ALIT--I-  212 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~--~---------------Lv-~c~~~---~lv~--m-  212 (342)
                      ++|.  +.||+|+||+||+|++..+  .||||+++........  +               +. ++..+   ++|+  + 
T Consensus         5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~~   84 (293)
T d1csna_           5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLG   84 (293)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECCC
T ss_pred             CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccCcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEecC
Confidence            3455  8999999999999998754  9999998665432211  1               33 33333   3333  1 


Q ss_pred             -------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-------CccccCCCCCc------
Q 039505          213 -------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-------SRISPVEGGTH------  254 (342)
Q Consensus       213 -------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-------a~~~~~~~~~~------  254 (342)
                                               ++.||+|||+   .+||||||||+|||++.+       .++.+++.+..      
T Consensus        85 ~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~---~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~  161 (293)
T d1csna_          85 PSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVT  161 (293)
T ss_dssp             CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTT
T ss_pred             CCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHH---CCceeccCCccceeecCcccccCCceEEcccceeEEcccCcc
Confidence                                     8899999999   999999999999999753       34444443211      


Q ss_pred             -------cccccccCcceee--------------------------cCCCCccccccccccccccccccc---ccCCCCC
Q 039505          255 -------MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRDKSTVD---LSFKGEF  298 (342)
Q Consensus       255 -------~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d---~~l~~~~  298 (342)
                             .....+||+.|||                          ||+.||............. .+.+   .....+.
T Consensus       162 ~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~-~i~~~~~~~~~~~l  240 (293)
T d1csna_         162 KQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYE-RIGEKKQSTPLREL  240 (293)
T ss_dssp             CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHH-HHHHHHHHSCHHHH
T ss_pred             ccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHH-HHHhccCCCChHHh
Confidence                   1233679999999                          9999997644322000000 0000   0000001


Q ss_pred             ChHHHHHHHHHHHHcccccCCCCCCHHHHHHHHHhc
Q 039505          299 DIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQG  334 (342)
Q Consensus       299 ~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~i  334 (342)
                      ....+.++.+++..|++.+|++||+.+.+.+.|+++
T Consensus       241 ~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~  276 (293)
T d1csna_         241 CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKV  276 (293)
T ss_dssp             TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred             cCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence            112334588888999999999999999988887765

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=2.6e-23  Score=192.02  Aligned_cols=158  Identities=13%  Similarity=0.104  Sum_probs=105.7

Q ss_pred             cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC---cc--------------EE-EeeCC---cEEE--E-------
Q 039505          165 RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH---VP--------------IV-ECHVG---ALIT--I-------  212 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~---~~--------------Lv-~c~~~---~lv~--m-------  212 (342)
                      +.||+|+||+||+|....+  .||||+++....+..   +|              ++ ++.+.   ++|+  +       
T Consensus        11 ~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~~gg~L~~   90 (321)
T d1tkia_          11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFE   90 (321)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHHH
T ss_pred             EEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecCCCCcHHH
Confidence            8999999999999998755  899999976532211   11              22 22222   3333  1       


Q ss_pred             --------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--Cc--cccCCCCCc-----cccccccCc
Q 039505          213 --------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SR--ISPVEGGTH-----MSTTIAGTA  263 (342)
Q Consensus       213 --------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~--~~~~~~~~~-----~~~~~~Gt~  263 (342)
                                          +++||+|||+   .+|+||||||+|||++.+  .+  +.+++....     ......||+
T Consensus        91 ~i~~~~~~l~e~~~~~i~~qi~~al~yLH~---~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~~~~~~t~  167 (321)
T d1tkia_          91 RINTSAFELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAP  167 (321)
T ss_dssp             HHTSSSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEEESCG
T ss_pred             HHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---cCCCcccccccceeecCCCceEEEEcccchhhccccCCccccccccc
Confidence                                8999999999   999999999999999865  33  444433221     123367999


Q ss_pred             ceee--------------------------cCCCCcccccccccccccccccccccC--CCCCChHHHHHHHHHHHHccc
Q 039505          264 GFLN--------------------------TKNPVISKSIENGNSHLRDKSTVDLSF--KGEFDIISVGKAVEIAMASVS  315 (342)
Q Consensus       264 ~y~a--------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l--~~~~~~~~~~~l~~l~~~Cl~  315 (342)
                      .|+|                          ||+.||.......   +. ..+.....  ..........++.+++.+||+
T Consensus       168 ~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~---~~-~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~  243 (321)
T d1tkia_         168 EYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ---II-ENIMNAEYTFDEEAFKEISIEAMDFVDRLLV  243 (321)
T ss_dssp             GGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH---HH-HHHHHTCCCCCHHHHTTSCHHHHHHHHTTSC
T ss_pred             ccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHH---HH-HHHHhCCCCCChhhccCCCHHHHHHHHHHcc
Confidence            9998                          9999998654322   00 11111111  100001223457899999999


Q ss_pred             ccCCCCCCHHHHHH
Q 039505          316 SKVNRRPLMNQVVM  329 (342)
Q Consensus       316 ~~P~~RPsm~eV~~  329 (342)
                      .||++|||+.|+++
T Consensus       244 ~dp~~R~s~~eil~  257 (321)
T d1tkia_         244 KERKSRMTASEALQ  257 (321)
T ss_dssp             SSGGGSCCHHHHHH
T ss_pred             CChhHCcCHHHHhc
Confidence            99999999999986

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=2.1e-23  Score=192.55  Aligned_cols=158  Identities=18%  Similarity=0.240  Sum_probs=108.0

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCC---CCCCcc-------------------EE-EeeCC---cEE
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSS---SQGHVP-------------------IV-ECHVG---ALI  210 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~---~~~~~~-------------------Lv-~c~~~---~lv  210 (342)
                      ++|.  +.||+|+||+||+|+...+  .||||++++..   ......                   +. ++..+   ++|
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            3455  8999999999999999765  99999996431   111110                   33 33333   344


Q ss_pred             E--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------
Q 039505          211 T--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------  254 (342)
Q Consensus       211 ~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------  254 (342)
                      +  +                          |+.||+|||+   .+|+||||||+|||++++  .++.+++....      
T Consensus        82 mEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~---~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~  158 (320)
T d1xjda_          82 MEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA  158 (320)
T ss_dssp             EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred             EeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCcccceeecCCCceeccccchhhhcccccc
Confidence            3  2                          9999999999   999999999999999988  44444443321      


Q ss_pred             cccccccCcceee--------------------------cCCCCcccccccccccccc-cccccccCCCCCChHHHHHHH
Q 039505          255 MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSHLRD-KSTVDLSFKGEFDIISVGKAV  307 (342)
Q Consensus       255 ~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~l~~-~~~~d~~l~~~~~~~~~~~l~  307 (342)
                      ......||+.|+|                          ||+.||.......   +.. .....+.+    +......+.
T Consensus       159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~---~~~~i~~~~~~~----p~~~s~~~~  231 (320)
T d1xjda_         159 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE---LFHSIRMDNPFY----PRWLEKEAK  231 (320)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHCCCCC----CTTSCHHHH
T ss_pred             cccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHH---HHHHHHcCCCCC----CccCCHHHH
Confidence            2233689999999                          9999998654322   111 11112222    223345588


Q ss_pred             HHHHHcccccCCCCCCHH-HHH
Q 039505          308 EIAMASVSSKVNRRPLMN-QVV  328 (342)
Q Consensus       308 ~l~~~Cl~~~P~~RPsm~-eV~  328 (342)
                      +++.+||+.||++|||+. |++
T Consensus       232 dli~~~L~~dP~~R~s~~~~l~  253 (320)
T d1xjda_         232 DLLVKLFVREPEKRLGVRGDIR  253 (320)
T ss_dssp             HHHHHHSCSSGGGSBTTBSCGG
T ss_pred             HHHHHhcccCCCCCcCHHHHHH
Confidence            999999999999999985 664

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=3.8e-22  Score=181.00  Aligned_cols=165  Identities=13%  Similarity=0.143  Sum_probs=104.2

Q ss_pred             ccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCCc------c--------------EE-EeeCC---cEEE--
Q 039505          162 NFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGHV------P--------------IV-ECHVG---ALIT--  211 (342)
Q Consensus       162 ~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~~------~--------------Lv-~c~~~---~lv~--  211 (342)
                      .|.  +.||+|+||+||+|+...+  .||||+++........      |              +. +|...   .+++  
T Consensus         3 ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~~   82 (292)
T d1unla_           3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF   82 (292)
T ss_dssp             SEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             CCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEeee
Confidence            455  8999999999999998655  8999999765432211      1              33 44444   3333  


Q ss_pred             E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCcc------cc
Q 039505          212 I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTHM------ST  257 (342)
Q Consensus       212 m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~~------~~  257 (342)
                      +                          +++||+|||+   .+|+||||||+|||++.+  .++.+++.....      ..
T Consensus        83 ~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~---~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~~  159 (292)
T d1unla_          83 CDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYS  159 (292)
T ss_dssp             CSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCCC
T ss_pred             ccccccccccccccccchhHHHHHHHHHHHHHHHhhc---CCEeeecccCcccccccCCceeeeecchhhcccCCCccce
Confidence            1                          8999999999   999999999999999977  444444433211      12


Q ss_pred             ccccCcceee---------------------------cCCCCcccccccc--cccccc-------------ccccc----
Q 039505          258 TIAGTAGFLN---------------------------TKNPVISKSIENG--NSHLRD-------------KSTVD----  291 (342)
Q Consensus       258 ~~~Gt~~y~a---------------------------tG~~P~~~~~~~~--~~~l~~-------------~~~~d----  291 (342)
                      ...+++.|+|                           ||+.|+....+..  ...+..             ....+    
T Consensus       160 ~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (292)
T d1unla_         160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPY  239 (292)
T ss_dssp             SCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCC
T ss_pred             eeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhccccccc
Confidence            2345666666                           8998864432211  000000             00000    


Q ss_pred             ccC-----CCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          292 LSF-----KGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       292 ~~l-----~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                      +..     ...........+.+++.+|++.||++|||+.|+++
T Consensus       240 ~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~  282 (292)
T d1unla_         240 PMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             CCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             ccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            000     00111222345788999999999999999999975

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=6.1e-22  Score=182.15  Aligned_cols=166  Identities=17%  Similarity=0.236  Sum_probs=103.0

Q ss_pred             hccC--cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCCCc------c--------------EE-EeeCC--------
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQGHV------P--------------IV-ECHVG--------  207 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~~~------~--------------Lv-~c~~~--------  207 (342)
                      ++|.  +.||+|+||+||+|++.. + .||||++.........      |              +. .|...        
T Consensus        10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~   89 (318)
T d3blha1          10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   89 (318)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC---------
T ss_pred             CCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccC
Confidence            4565  899999999999999864 4 9999998665332211      1              33 22221        


Q ss_pred             ---cEEE--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc
Q 039505          208 ---ALIT--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH  254 (342)
Q Consensus       208 ---~lv~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~  254 (342)
                         ++++  +                          +++||.|||+   .+|+||||||+|||++.+  .++.+++....
T Consensus        90 ~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~---~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~  166 (318)
T d3blha1          90 GSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARA  166 (318)
T ss_dssp             -CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred             ceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhcc---CCEEecCcCchheeecCCCcEEeeecceeee
Confidence               2333  1                          8999999999   999999999999999988  33333332211


Q ss_pred             ----------cccccccCcceee---------------------------cCCCCcccccccccccccc--ccccccc--
Q 039505          255 ----------MSTTIAGTAGFLN---------------------------TKNPVISKSIENGNSHLRD--KSTVDLS--  293 (342)
Q Consensus       255 ----------~~~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~~~~l~~--~~~~d~~--  293 (342)
                                .....+||++|+|                           ||+.||...........+.  ....++.  
T Consensus       167 ~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  246 (318)
T d3blha1         167 FSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW  246 (318)
T ss_dssp             CCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTS
T ss_pred             cccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhc
Confidence                      1122579999999                           9999987543221000000  0000000  


Q ss_pred             --------------C-CCCCChH-------HHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          294 --------------F-KGEFDII-------SVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       294 --------------l-~~~~~~~-------~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                                    . .......       ....+.+++.+||+.||++|||+.|+++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~  304 (318)
T d3blha1         247 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN  304 (318)
T ss_dssp             TTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             cccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHc
Confidence                          0 0000110       1234678999999999999999999985

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=2.7e-22  Score=186.80  Aligned_cols=170  Identities=17%  Similarity=0.138  Sum_probs=103.8

Q ss_pred             hccC--cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCCCc------c--------------EE-EeeCC--------
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQGHV------P--------------IV-ECHVG--------  207 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~~~------~--------------Lv-~c~~~--------  207 (342)
                      +.|.  +.||+|+||+||+|+... + .||||+++........      |              +. +|...        
T Consensus        18 ~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~   97 (346)
T d1cm8a_          18 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD   97 (346)
T ss_dssp             SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred             CcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccce
Confidence            3455  789999999999999865 4 8999999754322110      1              22 33221        


Q ss_pred             -cEEE--E------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCCc--cccCCCCCc---c
Q 039505          208 -ALIT--I------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSR--ISPVEGGTH---M  255 (342)
Q Consensus       208 -~lv~--m------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a~--~~~~~~~~~---~  255 (342)
                       ++|+  +                        ++.||+|||+   .+|+||||||+|||++.+..  +.+++....   .
T Consensus        98 ~~lv~e~~~~~l~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~  174 (346)
T d1cm8a_          98 FYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE  174 (346)
T ss_dssp             CEEEEECCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECCSS
T ss_pred             EEEEEecccccHHHHHHhccccHHHHHHHHHHHHHHHHHHHh---CCCcccccCcchhhcccccccccccccceeccCCc
Confidence             3333  1                        8999999999   99999999999999999843  333333221   2


Q ss_pred             ccccccCcceee---------------------------cCCCCcccccccccccccc---------cc-----------
Q 039505          256 STTIAGTAGFLN---------------------------TKNPVISKSIENGNSHLRD---------KS-----------  288 (342)
Q Consensus       256 ~~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~~~~l~~---------~~-----------  288 (342)
                      .+...||+.|+|                           ||+.|+.......  .+..         .+           
T Consensus       175 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (346)
T d1cm8a_         175 MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD--QLKEIMKVTGTPPAEFVQRLQSDEAK  252 (346)
T ss_dssp             CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHHHCCCCHHHHHTCSCHHHH
T ss_pred             cccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHH--HHHHHHhccCCCcHHHHhhhcchhhh
Confidence            234679999998                           8999987643211  0000         00           


Q ss_pred             ---cccccCCC----CCChHHHHHHHHHHHHcccccCCCCCCHHHHHHH--HHhcc
Q 039505          289 ---TVDLSFKG----EFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMV--REQGN  335 (342)
Q Consensus       289 ---~~d~~l~~----~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~--L~~i~  335 (342)
                         ...+....    .........+.+++.+||+.||++|||+.|+++.  ++.+.
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~  308 (346)
T d1cm8a_         253 NYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH  308 (346)
T ss_dssp             HHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             hhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCC
Confidence               00000000    0111223457889999999999999999999864  55543

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.85  E-value=2.6e-22  Score=185.52  Aligned_cols=166  Identities=14%  Similarity=0.209  Sum_probs=106.7

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC-cc---------------EE-EeeCC-----cEEE--E
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH-VP---------------IV-ECHVG-----ALIT--I  212 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~-~~---------------Lv-~c~~~-----~lv~--m  212 (342)
                      ++|.  ++||+|+||+||+|+...+  .||||+++....... +|               ++ ++...     ++|+  +
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~~  114 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHV  114 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEECC
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEeec
Confidence            4566  8999999999999998654  999999975432111 11               33 33221     3333  1


Q ss_pred             -----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC---CccccCCCCCc-----ccccccc
Q 039505          213 -----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK---SRISPVEGGTH-----MSTTIAG  261 (342)
Q Consensus       213 -----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~---a~~~~~~~~~~-----~~~~~~G  261 (342)
                                             +++||+|||+   .+|+||||||+|||++.+   .++.+++....     ......|
T Consensus       115 ~~~~L~~~~~~l~e~~i~~i~~qil~aL~~LH~---~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~~~~~~~  191 (328)
T d3bqca1         115 NNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVA  191 (328)
T ss_dssp             CSCBGGGTTTSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCCCCSCCS
T ss_pred             CCCcHHHHhcCCCHHHHHHHHHHHHHHHHHHhh---cccccccccccceEEcCCCCeeeecccccceeccCCCccccccc
Confidence                                   9999999999   999999999999999865   23444433211     2234678


Q ss_pred             Ccceee---------------------------cCCCCccccccccc--ccccc----------------------cccc
Q 039505          262 TAGFLN---------------------------TKNPVISKSIENGN--SHLRD----------------------KSTV  290 (342)
Q Consensus       262 t~~y~a---------------------------tG~~P~~~~~~~~~--~~l~~----------------------~~~~  290 (342)
                      |+.|+|                           +|+.|+........  ..+..                      ....
T Consensus       192 t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~  271 (328)
T d3bqca1         192 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDIL  271 (328)
T ss_dssp             CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTC
T ss_pred             CccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhc
Confidence            899988                           88888865432110  00000                      0000


Q ss_pred             --------cccCCCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          291 --------DLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       291 --------d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                              ..............++.+++.+|++.||++|||++|+++
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~  318 (328)
T d3bqca1         272 GRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  318 (328)
T ss_dssp             CCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                    000111111223456889999999999999999999986

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.7e-22  Score=188.31  Aligned_cols=166  Identities=19%  Similarity=0.200  Sum_probs=103.2

Q ss_pred             hccC--cccCcCCCeeEEEEEECCC--eEEEEEccCCCCCCC-----cc--------------EE-EeeCC--------c
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVKS--EVAMKMLSPSSSQGH-----VP--------------IV-ECHVG--------A  208 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~~--~vAVK~l~~~~~~~~-----~~--------------Lv-~c~~~--------~  208 (342)
                      ..|.  +.||+|+||+||+|+...+  .||||+++.......     +|              +. .|...        +
T Consensus         8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~   87 (345)
T d1pmea_           8 PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY   87 (345)
T ss_dssp             TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred             CCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEE
Confidence            3455  8999999999999998644  999999975432211     11              22 33221        1


Q ss_pred             EEE-E-------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--CccccCCCCCc------
Q 039505          209 LIT-I-------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--SRISPVEGGTH------  254 (342)
Q Consensus       209 lv~-m-------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--a~~~~~~~~~~------  254 (342)
                      ++. +                         +++||+|||+   .+||||||||+|||++++  .++.+++....      
T Consensus        88 l~~~~~~g~L~~~l~~~~l~~~~i~~i~~qil~al~yLH~---~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~  164 (345)
T d1pmea_          88 LVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD  164 (345)
T ss_dssp             EEEECCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGC
T ss_pred             EEEeecCCchhhhhhcCCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCcceEEECCCCCEEEcccCceeeccCCCc
Confidence            221 1                         8999999999   999999999999999988  44555443311      


Q ss_pred             ---cccccccCcceee---------------------------cCCCCcccccccc-cccccc-----------------
Q 039505          255 ---MSTTIAGTAGFLN---------------------------TKNPVISKSIENG-NSHLRD-----------------  286 (342)
Q Consensus       255 ---~~~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~-~~~l~~-----------------  286 (342)
                         .....+||+.|+|                           ||+.||....... ......                 
T Consensus       165 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (345)
T d1pmea_         165 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK  244 (345)
T ss_dssp             BCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHH
T ss_pred             cceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhh
Confidence               1233579999998                           8999987543211 000000                 


Q ss_pred             -cc--cccccCCCCCC-----hHHHHHHHHHHHHcccccCCCCCCHHHHHHH
Q 039505          287 -KS--TVDLSFKGEFD-----IISVGKAVEIAMASVSSKVNRRPLMNQVVMV  330 (342)
Q Consensus       287 -~~--~~d~~l~~~~~-----~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~  330 (342)
                       ..  ...+.. ...+     .....++.+++.+|++.||++|||+.|+++.
T Consensus       245 ~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h  295 (345)
T d1pmea_         245 ARNYLLSLPHK-NKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  295 (345)
T ss_dssp             HHHHHHTSCCC-CCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hhcccccCCcc-CCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence             00  000000 0001     1112357899999999999999999999864

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=5.6e-21  Score=178.54  Aligned_cols=166  Identities=16%  Similarity=0.130  Sum_probs=101.3

Q ss_pred             hccC--cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCCCc------c-----------EE----EeeC-------C-
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQGHV------P-----------IV----ECHV-------G-  207 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~~~------~-----------Lv----~c~~-------~-  207 (342)
                      +.|.  ++||+|+||+||+|++.. + .||||+++........      +           ++    .+..       . 
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~   96 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD   96 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence            3455  799999999999999875 4 9999999765432111      1           22    2211       1 


Q ss_pred             -cEEE--E-----------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc-----
Q 039505          208 -ALIT--I-----------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH-----  254 (342)
Q Consensus       208 -~lv~--m-----------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~-----  254 (342)
                       ++|+  +                       ++.||+|||+   .+|+||||||+|||++.+.  ++.+++....     
T Consensus        97 ~~iv~Ey~~~~l~~~~~~~~~~~~i~~~~~qil~gl~~LH~---~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~  173 (355)
T d2b1pa1          97 VYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF  173 (355)
T ss_dssp             EEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC--------
T ss_pred             eEEEEeccchHHHHhhhcCCCHHHHHHHHHHHHHHHHHhhh---cccccccCCccccccccccceeeechhhhhcccccc
Confidence             3333  1                       8999999999   9999999999999999883  3333332211     


Q ss_pred             cccccccCcceee--------------------------cCCCCcccccccc-cccc-----------cc------c---
Q 039505          255 MSTTIAGTAGFLN--------------------------TKNPVISKSIENG-NSHL-----------RD------K---  287 (342)
Q Consensus       255 ~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~-~~~l-----------~~------~---  287 (342)
                      ......||+.|+|                          +|+.||....... ...+           +.      .   
T Consensus       174 ~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  253 (355)
T d2b1pa1         174 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV  253 (355)
T ss_dssp             -------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHH
T ss_pred             ccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHh
Confidence            2233678999998                          9999986443111 0000           00      0   


Q ss_pred             ------------ccccccCCCC---CChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          288 ------------STVDLSFKGE---FDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       288 ------------~~~d~~l~~~---~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                                  ..........   ........+.+++.+|++.||++|||++|+++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~  310 (355)
T d2b1pa1         254 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ  310 (355)
T ss_dssp             HTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             hcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence                        0000000000   11224566889999999999999999999984

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=9.2e-22  Score=183.07  Aligned_cols=171  Identities=18%  Similarity=0.154  Sum_probs=106.0

Q ss_pred             hccC--cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCCCc------c-----------EE----Eee-----CC---
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQGHV------P-----------IV----ECH-----VG---  207 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~~~------~-----------Lv----~c~-----~~---  207 (342)
                      +.|.  +.||+|+||+||+|+... + .||||+++........      |           ++    ++.     +.   
T Consensus        18 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~   97 (348)
T d2gfsa1          18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND   97 (348)
T ss_dssp             TTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCC
T ss_pred             CCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCce
Confidence            4465  899999999999999864 4 9999999765432111      1           22    111     11   


Q ss_pred             cEEE--E-------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCC---cc
Q 039505          208 ALIT--I-------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGT---HM  255 (342)
Q Consensus       208 ~lv~--m-------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~---~~  255 (342)
                      .++.  +                         ++.||+|||+   .+|+||||||+|||++.+.  ++.+++...   ..
T Consensus        98 ~~i~~~~~gg~L~~~~~~~~l~e~~~~~i~~qil~aL~~LH~---~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~  174 (348)
T d2gfsa1          98 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE  174 (348)
T ss_dssp             CEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCC----CCTGG
T ss_pred             EEEEEeecCCchhhhcccccccHHHHHHHHHHHHHHHHHHHh---CCCcccccCCccccccccccccccccchhcccCcc
Confidence            1111  1                         8999999999   9999999999999999884  333333321   12


Q ss_pred             ccccccCcceee---------------------------cCCCCcccccccccc-cccc------------------ccc
Q 039505          256 STTIAGTAGFLN---------------------------TKNPVISKSIENGNS-HLRD------------------KST  289 (342)
Q Consensus       256 ~~~~~Gt~~y~a---------------------------tG~~P~~~~~~~~~~-~l~~------------------~~~  289 (342)
                      .....||+.|+|                           ||+.||......... .+..                  ...
T Consensus       175 ~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  254 (348)
T d2gfsa1         175 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNY  254 (348)
T ss_dssp             GSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHH
T ss_pred             cccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhh
Confidence            233668888888                           999998754321100 0000                  000


Q ss_pred             cc--ccCCCC----CChHHHHHHHHHHHHcccccCCCCCCHHHHHH--HHHhc
Q 039505          290 VD--LSFKGE----FDIISVGKAVEIAMASVSSKVNRRPLMNQVVM--VREQG  334 (342)
Q Consensus       290 ~d--~~l~~~----~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~--~L~~i  334 (342)
                      ..  +.....    ........+.+++.+|++.||++|||+.|+++  .+++.
T Consensus       255 ~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~  307 (348)
T d2gfsa1         255 IQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY  307 (348)
T ss_dssp             HTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             hhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCC
Confidence            00  000000    00112345788999999999999999999986  45544

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=8.1e-21  Score=175.20  Aligned_cols=164  Identities=20%  Similarity=0.219  Sum_probs=106.0

Q ss_pred             hccC--cccCcCCCeeEEEEEECC----C-eEEEEEccCCCC----C----CCcc---------------EE-EeeCC--
Q 039505          161 NNFE--RVPYKGGFITVYHGQLVK----S-EVAMKMLSPSSS----Q----GHVP---------------IV-ECHVG--  207 (342)
Q Consensus       161 ~~f~--~~lG~G~fG~Vykg~~~~----~-~vAVK~l~~~~~----~----~~~~---------------Lv-~c~~~--  207 (342)
                      ++|.  +.||+|+||+||+|+...    + .||||+++....    .    ..+|               +. ++...  
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~  103 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  103 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence            4576  899999999999998632    3 899999864321    1    1112               22 22222  


Q ss_pred             -cEEE--E--------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCCC--ccccCCCCCc--
Q 039505          208 -ALIT--I--------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTH--  254 (342)
Q Consensus       208 -~lv~--m--------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~a--~~~~~~~~~~--  254 (342)
                       ++++  +                          ++.||+|||+   .+|+||||||+||||+.+.  ++.+++....  
T Consensus       104 ~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~---~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~  180 (322)
T d1vzoa_         104 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV  180 (322)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred             eeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhc---CCEEeccCCccceeecCCCCEEEeeccchhhhc
Confidence             2222  1                          8999999999   9999999999999999883  4444432211  


Q ss_pred             -----cccccccCcceee----------------------------cCCCCcccccccccccccccccccccCCCCCChH
Q 039505          255 -----MSTTIAGTAGFLN----------------------------TKNPVISKSIENGNSHLRDKSTVDLSFKGEFDII  301 (342)
Q Consensus       255 -----~~~~~~Gt~~y~a----------------------------tG~~P~~~~~~~~~~~l~~~~~~d~~l~~~~~~~  301 (342)
                           ......|++.|++                            ||+.||...........+........  ...+..
T Consensus       181 ~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~--~~~~~~  258 (322)
T d1vzoa_         181 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE--PPYPQE  258 (322)
T ss_dssp             GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCC--CCCCTT
T ss_pred             ccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCC--CCCccc
Confidence                 1223568888887                            99999976543321011111111111  112233


Q ss_pred             HHHHHHHHHHHcccccCCCCCC-----HHHHHH
Q 039505          302 SVGKAVEIAMASVSSKVNRRPL-----MNQVVM  329 (342)
Q Consensus       302 ~~~~l~~l~~~Cl~~~P~~RPs-----m~eV~~  329 (342)
                      ...++.+++.+||+.||++|||     ++|+++
T Consensus       259 ~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~  291 (322)
T d1vzoa_         259 MSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  291 (322)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             CCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence            4556888999999999999994     788875

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.79  E-value=1.9e-20  Score=174.79  Aligned_cols=163  Identities=17%  Similarity=0.202  Sum_probs=102.0

Q ss_pred             cccCcCCCeeEEEEEECC-C-eEEEEEccCCCCCC---Ccc-------------------------EE-EeeCC-----c
Q 039505          165 RVPYKGGFITVYHGQLVK-S-EVAMKMLSPSSSQG---HVP-------------------------IV-ECHVG-----A  208 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~-~-~vAVK~l~~~~~~~---~~~-------------------------Lv-~c~~~-----~  208 (342)
                      ++||+|+||+||+|+... + .||||+++......   ..+                         ++ ++...     .
T Consensus        19 ~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~   98 (362)
T d1q8ya_          19 RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVH   98 (362)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEE
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeecccccee
Confidence            899999999999999864 4 99999997642100   000                         22 22211     2


Q ss_pred             EEE-E------------------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC--------CccccC
Q 039505          209 LIT-I------------------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK--------SRISPV  249 (342)
Q Consensus       209 lv~-m------------------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~--------a~~~~~  249 (342)
                      +++ +                              +++||+|||+.  .+|+||||||+|||++.+        .++.++
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~--~~IvHrDlKp~NIll~~~~~~~~~~~~kl~df  176 (362)
T d1q8ya_          99 VVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRR--CGIIHTDIKPENVLMEIVDSPENLIQIKIADL  176 (362)
T ss_dssp             EEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHT--TCEECSCCSGGGEEEEEEETTTTEEEEEECCC
T ss_pred             eeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhh--cCcccccCChhHeeeeccCcccccceeeEeec
Confidence            222 1                              89999999973  789999999999999865        233333


Q ss_pred             CCCCc---cccccccCcceee--------------------------cCCCCccccccccccc----ccc----------
Q 039505          250 EGGTH---MSTTIAGTAGFLN--------------------------TKNPVISKSIENGNSH----LRD----------  286 (342)
Q Consensus       250 ~~~~~---~~~~~~Gt~~y~a--------------------------tG~~P~~~~~~~~~~~----l~~----------  286 (342)
                      +....   .....+||+.|+|                          ||+.||..........    +..          
T Consensus       177 g~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~  256 (362)
T d1q8ya_         177 GNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPS  256 (362)
T ss_dssp             TTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCH
T ss_pred             ccccccccccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCH
Confidence            33211   2233679999998                          8999987543211000    000          


Q ss_pred             ---------ccccc-----ccC--------------CCCCChHHHHHHHHHHHHcccccCCCCCCHHHHHH
Q 039505          287 ---------KSTVD-----LSF--------------KGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVM  329 (342)
Q Consensus       287 ---------~~~~d-----~~l--------------~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~  329 (342)
                               ....+     ..+              ...........+.+++.+|++.||.+|||++|+++
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~  327 (362)
T d1q8ya_         257 YLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN  327 (362)
T ss_dssp             HHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred             HHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence                     00000     000              11123455677999999999999999999999986

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.51  E-value=6.1e-15  Score=124.89  Aligned_cols=83  Identities=17%  Similarity=0.154  Sum_probs=58.8

Q ss_pred             cccCcCCCeeEEEEEECCC-eEEEEEccCCCCCCCc----------------------c-----------EE--Ee-eCC
Q 039505          165 RVPYKGGFITVYHGQLVKS-EVAMKMLSPSSSQGHV----------------------P-----------IV--EC-HVG  207 (342)
Q Consensus       165 ~~lG~G~fG~Vykg~~~~~-~vAVK~l~~~~~~~~~----------------------~-----------Lv--~c-~~~  207 (342)
                      +.||+|+||+||+|...++ .||||+++........                      +           +.  +. ...
T Consensus         6 ~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~~~   85 (191)
T d1zara2           6 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWEGN   85 (191)
T ss_dssp             EEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEETT
T ss_pred             CEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEecCC
Confidence            7899999999999999888 9999987643211000                      0           11  11 112


Q ss_pred             cEEE--E-------------------ehhhhhhhhccCCCCeeeCCCCcceEEecCC-CccccCC
Q 039505          208 ALIT--I-------------------PKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-SRISPVE  250 (342)
Q Consensus       208 ~lv~--m-------------------ia~gL~yLH~~~~~~IiHrDlKp~NILLd~~-a~~~~~~  250 (342)
                      .+++  +                   +++||+|||+   .+|+||||||+|||++++ .++++++
T Consensus        86 ~lvme~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~---~giiHrDiKP~NILv~~~~~~liDFG  147 (191)
T d1zara2          86 AVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYH---RGIVHGDLSQYNVLVSEEGIWIIDFP  147 (191)
T ss_dssp             EEEEECCCCEEGGGCCCSCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEETTEEEECCCT
T ss_pred             EEEEEeeccccccchhhHHHHHHHHHHHHHHHHHhh---CCEEEccCChhheeeeCCCEEEEECC
Confidence            3433  1                   8999999999   999999999999999977 4555443

>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}

class: Alpha and beta proteins (a/b)
fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
superfamily: L domain-like
family: Polygalacturonase inhibiting protein PGIP
domain: Polygalacturonase inhibiting protein PGIP
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

Probab=93.93  E-value=0.0087  Score=51.97  Aligned_cols=41  Identities=29%  Similarity=0.339  Sum_probs=32.1

Q ss_pred             eEEeeeccCcCCCCCCCCCCCcchhhhcccchhhHhhhCCCccccCCCCc
Q 039505           93 IRTTFIHGNYDEQNILPDFKPVPKFLSQLSSLKFLKRNLGRNKLTGPLPV  142 (342)
Q Consensus        93 lr~~fl~gN~~~~~~pp~f~~ip~~l~~l~~L~~l~~~ls~N~l~g~ip~  142 (342)
                      ++...+.+|.+.|       .||++++++++|+.+  ++++|+++|.+|+
T Consensus       246 L~~L~Ls~N~l~g-------~iP~~l~~L~~L~~L--~Ls~N~l~g~iP~  286 (313)
T d1ogqa_         246 LNGLDLRNNRIYG-------TLPQGLTQLKFLHSL--NVSFNNLCGEIPQ  286 (313)
T ss_dssp             CCEEECCSSCCEE-------CCCGGGGGCTTCCEE--ECCSSEEEEECCC
T ss_pred             cccccCccCeecc-------cCChHHhCCCCCCEE--ECcCCcccccCCC
Confidence            3445555555543       578888999999999  9999999999996

>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}

class: Alpha and beta proteins (a/b)
fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
superfamily: L domain-like
family: Polygalacturonase inhibiting protein PGIP
domain: Polygalacturonase inhibiting protein PGIP
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

Probab=91.29  E-value=0.036  Score=47.80  Aligned_cols=28  Identities=25%  Similarity=0.517  Sum_probs=13.9

Q ss_pred             cchhhhcccchhhHhhhCCCccccCCCCcc
Q 039505          114 VPKFLSQLSSLKFLKRNLGRNKLTGPLPVE  143 (342)
Q Consensus       114 ip~~l~~l~~L~~l~~~ls~N~l~g~ip~~  143 (342)
                      +|.++++++.|+.+  ++++|.+.|.+|..
T Consensus       141 ~p~~l~~l~~L~~l--~l~~n~l~~~ip~~  168 (313)
T d1ogqa_         141 LPPSISSLPNLVGI--TFDGNRISGAIPDS  168 (313)
T ss_dssp             CCGGGGGCTTCCEE--ECCSSCCEEECCGG
T ss_pred             CchhhccCccccee--eccccccccccccc
Confidence            34445555555555  55555555555443

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=88.72  E-value=0.91  Score=37.08  Aligned_cols=39  Identities=10%  Similarity=0.031  Sum_probs=24.1

Q ss_pred             HHHHHhhccC--cccCcCCCeeEEEEEECCCeEEEEEccCC
Q 039505          155 LSLRVTNNFE--RVPYKGGFITVYHGQLVKSEVAMKMLSPS  193 (342)
Q Consensus       155 ~l~~at~~f~--~~lG~G~fG~Vykg~~~~~~vAVK~l~~~  193 (342)
                      +|.+.-..+.  +..+.++.+.||+....++.+.||+....
T Consensus         8 ~l~~~~~~~~~~~~~~G~s~~~v~rv~~~~~~~vlk~~~~~   48 (263)
T d1j7la_           8 ELKKLIEKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSR   48 (263)
T ss_dssp             HHHHHHTTSEEEECSCCCSSSEEEEEECSSCEEEEEEECGG
T ss_pred             HHHHhhhceEEEEcCCCCCCCcEEEEEeCCCeEEEEEcCCC
Confidence            4555555555  33233445689998766667788887644

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=85.08  E-value=1.2  Score=36.04  Aligned_cols=17  Identities=18%  Similarity=0.261  Sum_probs=15.4

Q ss_pred             CeeeCCCCcceEEecCC
Q 039505          227 PIIQRDMKSTNILLNEK  243 (342)
Q Consensus       227 ~IiHrDlKp~NILLd~~  243 (342)
                      .++|+|+.|.|||++++
T Consensus       176 ~liHgD~~~~Nvl~~~~  192 (255)
T d1nd4a_         176 VVTHGDACLPNIMVENG  192 (255)
T ss_dssp             EEECSSCCGGGEEEETT
T ss_pred             eEEeCCCCCcceEEeCC
Confidence            47999999999999877

>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
superfamily: L domain-like
family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain
domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=83.18  E-value=0.3  Score=35.88  Aligned_cols=19  Identities=16%  Similarity=0.228  Sum_probs=11.5

Q ss_pred             ccccccccCCCCcCccccc
Q 039505           66 QVWSLRSFPDGIRNCYRFN   84 (342)
Q Consensus        66 ~~~~~r~fp~~~~~C~~l~   84 (342)
                      ++..++++|+++.++.+|.
T Consensus        28 s~N~l~~lp~~~~~l~~L~   46 (124)
T d1dcea3          28 SHNRLRALPPALAALRCLE   46 (124)
T ss_dssp             CSSCCCCCCGGGGGCTTCC
T ss_pred             CCCccCcchhhhhhhhccc
Confidence            4555666776666665554